View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21373_low_8 (Length: 414)

Name: NF21373_low_8
Description: NF21373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21373_low_8
NF21373_low_8
[»] chr3 (88 HSPs)
chr3 (1-395)||(37776667-37777060)
chr3 (175-363)||(28529250-28529436)
chr3 (175-364)||(41451889-41452078)
chr3 (175-351)||(20493452-20493628)
chr3 (175-364)||(24734702-24734891)
chr3 (175-360)||(52123954-52124139)
chr3 (175-363)||(5452057-5452243)
chr3 (175-357)||(27243042-27243225)
chr3 (175-364)||(46450064-46450251)
chr3 (216-357)||(18427153-18427292)
chr3 (178-364)||(20791296-20791482)
chr3 (175-348)||(46160946-46161117)
chr3 (193-307)||(26310497-26310611)
chr3 (222-364)||(29588727-29588869)
chr3 (175-336)||(55452037-55452196)
chr3 (187-354)||(8824983-8825150)
chr3 (175-350)||(29755497-29755672)
chr3 (178-364)||(14236019-14236205)
chr3 (175-364)||(48351433-48351622)
chr3 (176-358)||(15790370-15790551)
chr3 (175-359)||(37600128-37600313)
chr3 (175-357)||(46575945-46576126)
chr3 (185-364)||(50156654-50156831)
chr3 (188-330)||(10948588-10948730)
chr3 (171-305)||(40715915-40716049)
chr3 (179-336)||(41387564-41387719)
chr3 (188-328)||(22604570-22604710)
chr3 (226-307)||(19345051-19345132)
chr3 (171-359)||(54140891-54141080)
chr3 (226-338)||(2419484-2419596)
chr3 (180-303)||(50661576-50661700)
chr3 (188-359)||(41707440-41707609)
chr3 (179-357)||(13809083-13809261)
chr3 (184-276)||(46237128-46237220)
chr3 (175-330)||(45515525-45515678)
chr3 (175-359)||(10769723-10769908)
chr3 (223-363)||(44844026-44844167)
chr3 (189-355)||(40702125-40702289)
chr3 (247-364)||(752461-752576)
chr3 (206-354)||(24748913-24749062)
chr3 (239-344)||(38414708-38414813)
chr3 (208-336)||(138793-138921)
chr3 (247-364)||(742025-742140)
chr3 (259-333)||(24429050-24429124)
chr3 (209-287)||(43657067-43657145)
chr3 (175-304)||(2008992-2009120)
chr3 (175-363)||(7640589-7640778)
chr3 (265-338)||(29388614-29388687)
chr3 (178-286)||(30624633-30624739)
chr3 (175-247)||(10769719-10769791)
chr3 (175-247)||(54140887-54140959)
chr3 (207-363)||(43016440-43016598)
chr3 (178-268)||(29389103-29389193)
chr3 (242-364)||(39186028-39186150)
chr3 (175-276)||(21232604-21232705)
chr3 (230-307)||(49072057-49072134)
chr3 (175-247)||(37600124-37600196)
chr3 (175-243)||(52951475-52951543)
chr3 (208-287)||(357790-357869)
chr3 (184-247)||(24748913-24748976)
chr3 (177-359)||(38928007-38928190)
chr3 (245-351)||(38138589-38138695)
chr3 (24-134)||(45779541-45779651)
chr3 (313-358)||(27243047-27243092)
chr3 (175-243)||(29775136-29775202)
chr3 (178-247)||(38928006-38928075)
chr3 (290-359)||(52951377-52951446)
chr3 (179-248)||(55283167-55283236)
chr3 (221-305)||(42340874-42340958)
chr3 (173-219)||(18722595-18722641)
chr3 (226-304)||(41607459-41607537)
chr3 (3-76)||(8087922-8087995)
chr3 (205-274)||(35094108-35094177)
chr3 (213-330)||(37285318-37285435)
chr3 (296-357)||(52951476-52951537)
chr3 (216-348)||(36750974-36751106)
chr3 (178-246)||(52951376-52951444)
chr3 (257-363)||(29718846-29718952)
chr3 (179-242)||(40631194-40631257)
chr3 (213-295)||(7419241-7419323)
chr3 (314-364)||(20493579-20493629)
chr3 (260-353)||(49418424-49418518)
chr3 (226-263)||(18722535-18722572)
chr3 (208-336)||(37926561-37926690)
chr3 (178-247)||(39185237-39185306)
chr3 (296-364)||(43657870-43657938)
chr3 (24-104)||(53581124-53581204)
chr3 (316-364)||(55283103-55283151)
[»] chr6 (46 HSPs)
chr6 (179-364)||(34905337-34905522)
chr6 (175-336)||(445815-445976)
chr6 (188-360)||(5106308-5106480)
chr6 (178-351)||(10133165-10133338)
chr6 (178-364)||(21987292-21987478)
chr6 (186-336)||(31116146-31116296)
chr6 (178-364)||(1392630-1392813)
chr6 (226-364)||(16851967-16852105)
chr6 (175-355)||(12753763-12753943)
chr6 (175-359)||(19090213-19090398)
chr6 (225-350)||(32112725-32112850)
chr6 (174-336)||(2675891-2676053)
chr6 (179-336)||(32122796-32122953)
chr6 (207-362)||(17144669-17144822)
chr6 (181-287)||(35128794-35128900)
chr6 (205-359)||(19737433-19737588)
chr6 (220-361)||(12780758-12780897)
chr6 (174-363)||(31443955-31444144)
chr6 (175-354)||(10060856-10061036)
chr6 (230-364)||(16187428-16187558)
chr6 (175-338)||(8441869-8442020)
chr6 (175-338)||(8450673-8450824)
chr6 (221-359)||(32598947-32599085)
chr6 (175-287)||(6531369-6531481)
chr6 (230-360)||(16187650-16187776)
chr6 (225-363)||(12784934-12785072)
chr6 (221-364)||(16436108-16436250)
chr6 (170-363)||(12690244-12690438)
chr6 (205-286)||(4595769-4595850)
chr6 (205-276)||(12327287-12327358)
chr6 (24-141)||(19110532-19110649)
chr6 (178-362)||(13001692-13001876)
chr6 (175-247)||(19090209-19090281)
chr6 (175-287)||(373396-373508)
chr6 (193-277)||(2931576-2931660)
chr6 (177-247)||(19737431-19737501)
chr6 (228-363)||(899943-900084)
chr6 (171-242)||(17226645-17226716)
chr6 (207-247)||(9940387-9940427)
chr6 (171-207)||(12780894-12780930)
chr6 (205-256)||(373504-373555)
chr6 (223-270)||(6109916-6109963)
chr6 (324-357)||(35128867-35128900)
chr6 (175-247)||(10060973-10061045)
chr6 (175-231)||(12753755-12753811)
chr6 (313-357)||(19305789-19305833)
[»] chr2 (94 HSPs)
chr2 (175-364)||(26767755-26767944)
chr2 (179-364)||(6980114-6980299)
chr2 (179-370)||(9470082-9470272)
chr2 (175-357)||(12989188-12989370)
chr2 (176-357)||(38464161-38464342)
chr2 (178-360)||(45554567-45554741)
chr2 (179-364)||(44274236-44274420)
chr2 (175-357)||(10981515-10981695)
chr2 (175-335)||(11539420-11539583)
chr2 (175-363)||(36471833-36472021)
chr2 (175-307)||(18511260-18511392)
chr2 (175-364)||(32856129-32856322)
chr2 (175-359)||(28898035-28898220)
chr2 (179-307)||(16719481-16719609)
chr2 (178-356)||(34142141-34142319)
chr2 (178-359)||(42182889-42183071)
chr2 (175-359)||(4964671-4964856)
chr2 (175-363)||(19639090-19639278)
chr2 (175-363)||(19837683-19837871)
chr2 (173-307)||(17188062-17188194)
chr2 (179-304)||(3804585-3804711)
chr2 (172-364)||(12098862-12099053)
chr2 (216-363)||(15884471-15884614)
chr2 (221-362)||(35316397-35316538)
chr2 (175-370)||(15508911-15509107)
chr2 (187-335)||(30718350-30718497)
chr2 (183-363)||(37652240-37652420)
chr2 (179-317)||(7919311-7919447)
chr2 (173-355)||(2122790-2122972)
chr2 (175-303)||(2476533-2476659)
chr2 (175-336)||(33678138-33678298)
chr2 (175-354)||(1110195-1110375)
chr2 (179-336)||(4602890-4603046)
chr2 (179-356)||(37228499-37228678)
chr2 (217-362)||(43414394-43414538)
chr2 (225-357)||(25238278-25238411)
chr2 (175-363)||(24497189-24497375)
chr2 (178-247)||(28898034-28898103)
chr2 (221-352)||(24895272-24895404)
chr2 (175-287)||(31395516-31395628)
chr2 (175-307)||(32701467-32701599)
chr2 (225-364)||(38104295-38104434)
chr2 (3-154)||(27634909-27635060)
chr2 (257-363)||(472158-472264)
chr2 (179-261)||(1107039-1107121)
chr2 (273-355)||(4552843-4552925)
chr2 (178-359)||(19193501-19193683)
chr2 (223-364)||(19953440-19953582)
chr2 (175-329)||(27494480-27494634)
chr2 (24-141)||(13911832-13911949)
chr2 (179-247)||(4964671-4964739)
chr2 (175-247)||(37719831-37719903)
chr2 (175-261)||(41805873-41805959)
chr2 (179-240)||(27968919-27968980)
chr2 (179-240)||(28091607-28091668)
chr2 (179-240)||(28101839-28101900)
chr2 (175-303)||(41546082-41546210)
chr2 (178-307)||(45270607-45270735)
chr2 (175-247)||(42183003-42183075)
chr2 (271-358)||(14489539-14489626)
chr2 (184-246)||(11729715-11729777)
chr2 (195-365)||(25730432-25730602)
chr2 (191-364)||(43400146-43400320)
chr2 (177-269)||(10339767-10339857)
chr2 (175-247)||(20951603-20951673)
chr2 (225-354)||(30849284-30849412)
chr2 (181-364)||(31494211-31494393)
chr2 (227-319)||(44674593-44674686)
chr2 (175-247)||(15509028-15509100)
chr2 (178-285)||(19427320-19427425)
chr2 (187-251)||(25666700-25666764)
chr2 (175-247)||(37398808-37398880)
chr2 (205-363)||(42579651-42579810)
chr2 (35-141)||(26510257-26510363)
chr2 (186-287)||(8009521-8009622)
chr2 (11-76)||(10943998-10944063)
chr2 (11-76)||(10949867-10949932)
chr2 (3-76)||(26370228-26370300)
chr2 (225-364)||(6315705-6315845)
chr2 (175-250)||(11775866-11775939)
chr2 (175-263)||(29795802-29795890)
chr2 (175-247)||(37228613-37228685)
chr2 (175-242)||(44274352-44274419)
chr2 (286-356)||(6420456-6420526)
chr2 (313-359)||(15508915-15508961)
chr2 (313-359)||(37228499-37228545)
chr2 (313-359)||(42182890-42182936)
chr2 (175-286)||(4877280-4877390)
chr2 (175-212)||(19193497-19193534)
chr2 (175-248)||(23463936-23464009)
chr2 (315-364)||(30706407-30706456)
chr2 (24-141)||(43680016-43680132)
chr2 (182-246)||(14715627-14715691)
chr2 (221-285)||(21215394-21215458)
[»] chr4 (104 HSPs)
chr4 (179-363)||(8108957-8109141)
chr4 (178-364)||(43771126-43771312)
chr4 (175-363)||(39471154-39471342)
chr4 (175-363)||(34129395-34129583)
chr4 (175-363)||(50164392-50164580)
chr4 (179-359)||(24834579-24834759)
chr4 (189-351)||(722168-722330)
chr4 (175-364)||(26361302-26361483)
chr4 (183-356)||(20454545-20454716)
chr4 (189-352)||(754586-754749)
chr4 (176-363)||(47009187-47009374)
chr4 (175-363)||(49077246-49077434)
chr4 (175-363)||(49242167-49242355)
chr4 (175-354)||(40991593-40991772)
chr4 (175-336)||(33653511-33653672)
chr4 (216-364)||(24938409-24938557)
chr4 (175-299)||(50571861-50571985)
chr4 (220-359)||(22542423-22542562)
chr4 (175-316)||(20225383-20225522)
chr4 (178-307)||(46287441-46287570)
chr4 (221-364)||(19447174-19447318)
chr4 (228-363)||(45310943-45311078)
chr4 (183-358)||(48339340-48339515)
chr4 (175-357)||(13069938-13070120)
chr4 (205-347)||(25719123-25719266)
chr4 (188-335)||(29699499-29699645)
chr4 (179-364)||(39016664-39016850)
chr4 (179-355)||(10169648-10169822)
chr4 (226-363)||(31250877-31251015)
chr4 (175-364)||(42862414-42862604)
chr4 (220-364)||(38537507-38537654)
chr4 (195-319)||(50481584-50481708)
chr4 (187-302)||(46242000-46242113)
chr4 (175-307)||(13519944-13520078)
chr4 (209-359)||(30866930-30867081)
chr4 (176-287)||(47237812-47237923)
chr4 (205-354)||(21776848-21776998)
chr4 (221-363)||(43124509-43124651)
chr4 (175-357)||(45081743-45081925)
chr4 (187-307)||(33995986-33996106)
chr4 (210-354)||(52671862-52672006)
chr4 (172-357)||(43958145-43958327)
chr4 (179-359)||(2187812-2187992)
chr4 (225-330)||(5044568-5044673)
chr4 (242-354)||(5545642-5545755)
chr4 (175-276)||(22592301-22592402)
chr4 (208-348)||(37451023-37451161)
chr4 (202-307)||(41153249-41153354)
chr4 (184-288)||(2088735-2088839)
chr4 (275-362)||(11895134-11895222)
chr4 (188-350)||(19937180-19937341)
chr4 (3-154)||(17778040-17778191)
chr4 (205-287)||(16178611-16178692)
chr4 (214-355)||(51206079-51206221)
chr4 (175-307)||(49682842-49682974)
chr4 (244-364)||(52279253-52279373)
chr4 (222-364)||(35179653-35179796)
chr4 (176-247)||(51206157-51206228)
chr4 (196-362)||(51904611-51904778)
chr4 (216-302)||(38636375-38636461)
chr4 (175-305)||(49769857-49769987)
chr4 (175-244)||(40812034-40812103)
chr4 (236-325)||(46536295-46536384)
chr4 (224-325)||(50652369-50652470)
chr4 (24-141)||(53708350-53708467)
chr4 (179-362)||(27654478-27654662)
chr4 (179-247)||(39016777-39016845)
chr4 (221-281)||(41278695-41278755)
chr4 (225-363)||(18421826-18421962)
chr4 (179-359)||(37315564-37315742)
chr4 (175-250)||(42862415-42862490)
chr4 (175-364)||(44832460-44832650)
chr4 (175-261)||(48608077-48608163)
chr4 (221-284)||(11127796-11127859)
chr4 (175-247)||(44832577-44832649)
chr4 (184-263)||(1559812-1559891)
chr4 (226-304)||(4138913-4138991)
chr4 (313-359)||(37315564-37315610)
chr4 (3-76)||(32663459-32663532)
chr4 (178-247)||(37315674-37315743)
chr4 (225-325)||(2860924-2861024)
chr4 (225-359)||(34961699-34961828)
chr4 (193-281)||(50879471-50879559)
chr4 (175-219)||(53871002-53871046)
chr4 (230-285)||(28304089-28304144)
chr4 (225-363)||(1559909-1560047)
chr4 (205-247)||(16178697-16178739)
chr4 (325-363)||(20225350-20225388)
chr4 (174-362)||(5994863-5995052)
chr4 (287-363)||(19321873-19321947)
chr4 (313-358)||(40812039-40812084)
chr4 (207-240)||(47237767-47237800)
chr4 (181-222)||(51904616-51904657)
chr4 (175-227)||(11895084-11895136)
chr4 (175-247)||(13070054-13070126)
chr4 (279-359)||(19933475-19933555)
chr4 (311-363)||(27654474-27654526)
chr4 (175-239)||(33787989-33788053)
chr4 (273-364)||(37586459-37586551)
chr4 (179-235)||(40925787-40925843)
chr4 (176-248)||(40977589-40977661)
chr4 (296-364)||(40991705-40991773)
chr4 (221-261)||(42925337-42925377)
chr4 (296-364)||(47109334-47109402)
[»] chr7 (93 HSPs)
chr7 (175-363)||(22189936-22190124)
chr7 (175-364)||(27888279-27888468)
chr7 (175-359)||(27949270-27949454)
chr7 (179-363)||(11824072-11824254)
chr7 (175-353)||(33008101-33008276)
chr7 (171-364)||(14795124-14795315)
chr7 (171-364)||(15242116-15242307)
chr7 (178-362)||(46517293-46517475)
chr7 (175-364)||(6442162-6442351)
chr7 (170-352)||(32205071-32205250)
chr7 (175-318)||(31502504-31502647)
chr7 (178-364)||(32212864-32213049)
chr7 (197-362)||(7775019-7775183)
chr7 (175-336)||(12263458-12263619)
chr7 (221-360)||(11692222-11692361)
chr7 (170-364)||(39254075-39254269)
chr7 (225-362)||(25686831-25686968)
chr7 (177-369)||(48374428-48374618)
chr7 (179-364)||(24539116-24539302)
chr7 (175-358)||(6580002-6580188)
chr7 (179-364)||(13919781-13919967)
chr7 (179-364)||(17749695-17749881)
chr7 (178-338)||(19422854-19423014)
chr7 (195-360)||(44350800-44350965)
chr7 (176-288)||(19494409-19494521)
chr7 (175-359)||(26703438-26703621)
chr7 (182-295)||(44510999-44511112)
chr7 (175-287)||(17354598-17354710)
chr7 (179-307)||(25092712-25092840)
chr7 (178-364)||(25428472-25428659)
chr7 (176-357)||(45909453-45909636)
chr7 (178-338)||(32178824-32178981)
chr7 (178-307)||(36845573-36845701)
chr7 (176-287)||(22786149-22786260)
chr7 (188-362)||(7459353-7459527)
chr7 (173-279)||(8073367-8073473)
chr7 (175-288)||(12270985-12271095)
chr7 (175-307)||(9648919-9649053)
chr7 (221-359)||(19840883-19841022)
chr7 (179-304)||(32605333-32605457)
chr7 (174-345)||(10933978-10934149)
chr7 (245-351)||(27320441-27320547)
chr7 (11-141)||(47294875-47295005)
chr7 (24-141)||(11567743-11567860)
chr7 (170-247)||(37549616-37549693)
chr7 (175-247)||(13919894-13919966)
chr7 (204-359)||(14759669-14759825)
chr7 (175-286)||(10619464-10619574)
chr7 (181-247)||(45909570-45909636)
chr7 (225-354)||(46994366-46994496)
chr7 (174-247)||(14759757-14759830)
chr7 (24-141)||(18807264-18807381)
chr7 (175-244)||(19840879-19840948)
chr7 (283-354)||(36845495-36845566)
chr7 (176-286)||(9111406-9111516)
chr7 (177-247)||(26703436-26703506)
chr7 (279-336)||(31874117-31874174)
chr7 (175-243)||(2520630-2520698)
chr7 (179-247)||(25428477-25428545)
chr7 (179-247)||(27320226-27320294)
chr7 (208-252)||(31874061-31874105)
chr7 (254-360)||(31759839-31759943)
chr7 (196-307)||(32055594-32055705)
chr7 (277-343)||(7774944-7775009)
chr7 (286-336)||(12167315-12167365)
chr7 (286-356)||(38065328-38065398)
chr7 (179-248)||(31959967-31960036)
chr7 (263-307)||(3855861-3855905)
chr7 (225-281)||(10477284-10477340)
chr7 (24-140)||(23834624-23834740)
chr7 (296-364)||(27888278-27888346)
chr7 (259-359)||(31628080-31628180)
chr7 (175-219)||(42863573-42863617)
chr7 (216-268)||(45206025-45206077)
chr7 (181-276)||(46067940-46068036)
chr7 (179-322)||(1687985-1688127)
chr7 (209-276)||(17813857-17813923)
chr7 (183-246)||(23934021-23934084)
chr7 (313-364)||(24539256-24539307)
chr7 (175-242)||(27888400-27888467)
chr7 (216-263)||(28713054-28713101)
chr7 (283-354)||(30742544-30742615)
chr7 (176-331)||(31731282-31731439)
chr7 (175-233)||(2520715-2520773)
chr7 (237-307)||(23564086-23564156)
chr7 (181-242)||(20954798-20954859)
chr7 (189-261)||(38065415-38065485)
chr7 (315-359)||(22786152-22786196)
chr7 (58-90)||(24789108-24789140)
chr7 (324-364)||(32205075-32205115)
chr7 (324-364)||(35549643-35549683)
chr7 (219-251)||(42274656-42274688)
chr7 (315-359)||(42863569-42863613)
[»] chr8 (73 HSPs)
chr8 (175-364)||(1977167-1977356)
chr8 (175-364)||(16983391-16983580)
chr8 (178-367)||(28413861-28414049)
chr8 (176-356)||(5979878-5980057)
chr8 (175-366)||(34861184-34861368)
chr8 (179-336)||(32072098-32072255)
chr8 (178-363)||(8903852-8904037)
chr8 (179-364)||(9952752-9952936)
chr8 (175-359)||(35151728-35151912)
chr8 (185-351)||(24055932-24056098)
chr8 (205-364)||(17499229-17499386)
chr8 (175-336)||(8914768-8914929)
chr8 (175-359)||(13407322-13407507)
chr8 (175-347)||(7493353-7493530)
chr8 (175-330)||(43506535-43506687)
chr8 (178-364)||(23685131-23685313)
chr8 (175-336)||(41727427-41727588)
chr8 (205-364)||(36804833-36804992)
chr8 (191-296)||(1961295-1961400)
chr8 (175-336)||(14236335-14236496)
chr8 (178-351)||(4674911-4675079)
chr8 (179-357)||(6387564-6387741)
chr8 (175-350)||(31301112-31301286)
chr8 (182-364)||(11962676-11962857)
chr8 (225-363)||(13214542-13214680)
chr8 (188-348)||(35689490-35689651)
chr8 (178-357)||(45246432-45246613)
chr8 (175-287)||(7599493-7599605)
chr8 (205-333)||(17741552-17741680)
chr8 (205-351)||(6098784-6098928)
chr8 (209-336)||(35797426-35797551)
chr8 (175-336)||(36629656-36629816)
chr8 (217-303)||(9192040-9192126)
chr8 (181-304)||(17716856-17716977)
chr8 (182-304)||(4319787-4319909)
chr8 (223-364)||(9193427-9193568)
chr8 (218-336)||(9453502-9453621)
chr8 (178-287)||(1423746-1423855)
chr8 (239-363)||(34952504-34952628)
chr8 (244-305)||(35819198-35819259)
chr8 (211-352)||(17915849-17915986)
chr8 (180-287)||(1205829-1205936)
chr8 (208-287)||(43026321-43026400)
chr8 (24-141)||(26381512-26381629)
chr8 (175-247)||(13856506-13856578)
chr8 (177-244)||(31691625-31691692)
chr8 (322-364)||(1961402-1961444)
chr8 (208-281)||(10868021-10868094)
chr8 (237-336)||(25915088-25915190)
chr8 (187-255)||(37489437-37489505)
chr8 (292-359)||(5095759-5095826)
chr8 (175-261)||(45218614-45218698)
chr8 (173-287)||(33417678-33417791)
chr8 (172-214)||(34952455-34952497)
chr8 (175-336)||(45524897-45525059)
chr8 (182-255)||(12212126-12212199)
chr8 (182-255)||(12456554-12456627)
chr8 (173-246)||(13407316-13407389)
chr8 (206-283)||(28211961-28212038)
chr8 (216-312)||(28485426-28485523)
chr8 (176-257)||(39023428-39023509)
chr8 (223-307)||(3099693-3099777)
chr8 (311-363)||(11574162-11574214)
chr8 (315-358)||(8671086-8671129)
chr8 (208-247)||(34303465-34303504)
chr8 (181-247)||(1205941-1206007)
chr8 (175-228)||(5095829-5095882)
chr8 (323-364)||(6891525-6891566)
chr8 (205-262)||(29011080-29011137)
chr8 (175-286)||(31711620-31711730)
chr8 (295-364)||(38091468-38091537)
chr8 (96-156)||(10543823-10543883)
chr8 (235-287)||(34303509-34303561)
[»] chr5 (67 HSPs)
chr5 (175-353)||(28490727-28490905)
chr5 (173-364)||(34368355-34368546)
chr5 (217-364)||(41105564-41105711)
chr5 (178-336)||(10141998-10142154)
chr5 (221-362)||(5413730-5413874)
chr5 (178-364)||(30325869-30326054)
chr5 (175-364)||(37455346-37455538)
chr5 (175-336)||(17537124-17537285)
chr5 (175-364)||(42224584-42224774)
chr5 (179-351)||(28223783-28223955)
chr5 (186-362)||(34384687-34384863)
chr5 (175-364)||(28611772-28611961)
chr5 (205-336)||(25710494-25710625)
chr5 (205-364)||(28434816-28434969)
chr5 (221-363)||(41330390-41330530)
chr5 (178-364)||(27592446-27592632)
chr5 (175-320)||(39246605-39246750)
chr5 (179-364)||(1923546-1923731)
chr5 (175-357)||(40971453-40971636)
chr5 (175-336)||(43405390-43405551)
chr5 (178-336)||(28090251-28090407)
chr5 (179-307)||(25630808-25630936)
chr5 (175-330)||(10950083-10950238)
chr5 (239-331)||(14553573-14553665)
chr5 (225-364)||(36337881-36338023)
chr5 (225-364)||(4714796-4714935)
chr5 (175-289)||(28155769-28155881)
chr5 (233-307)||(25919266-25919340)
chr5 (175-287)||(4959275-4959387)
chr5 (175-362)||(32401114-32401302)
chr5 (173-260)||(32309475-32309562)
chr5 (186-359)||(17434849-17435019)
chr5 (227-364)||(10666682-10666819)
chr5 (287-364)||(12076056-12076133)
chr5 (226-307)||(31885882-31885963)
chr5 (204-359)||(17568700-17568856)
chr5 (175-247)||(42224585-42224657)
chr5 (208-287)||(13456236-13456315)
chr5 (205-359)||(32050334-32050489)
chr5 (174-247)||(17568695-17568768)
chr5 (198-283)||(43541871-43541956)
chr5 (222-286)||(24915099-24915163)
chr5 (222-286)||(24990930-24990994)
chr5 (178-250)||(32050418-32050490)
chr5 (176-357)||(6263881-6264061)
chr5 (181-359)||(26072106-26072285)
chr5 (175-246)||(26072218-26072289)
chr5 (175-261)||(1649547-1649633)
chr5 (175-248)||(4959391-4959464)
chr5 (173-265)||(17700166-17700256)
chr5 (175-247)||(6263995-6264067)
chr5 (208-276)||(10253164-10253232)
chr5 (313-364)||(4959274-4959325)
chr5 (179-286)||(8912511-8912618)
chr5 (224-271)||(25564033-25564080)
chr5 (187-325)||(2525583-2525721)
chr5 (230-304)||(34480005-34480079)
chr5 (173-247)||(40971445-40971519)
chr5 (285-354)||(5465656-5465725)
chr5 (175-247)||(24915169-24915239)
chr5 (175-247)||(24991000-24991070)
chr5 (273-349)||(25002014-25002091)
chr5 (184-255)||(13456170-13456239)
chr5 (313-359)||(42224724-42224770)
chr5 (272-305)||(4427336-4427369)
chr5 (213-355)||(4877752-4877898)
chr5 (327-363)||(10300052-10300088)
[»] chr1 (94 HSPs)
chr1 (175-360)||(6133623-6133807)
chr1 (179-363)||(10659764-10659948)
chr1 (173-358)||(26980262-26980447)
chr1 (175-363)||(11987623-11987811)
chr1 (179-363)||(8899015-8899199)
chr1 (175-336)||(41958082-41958241)
chr1 (178-364)||(19101595-19101781)
chr1 (175-364)||(28218040-28218231)
chr1 (175-363)||(2225223-2225409)
chr1 (178-364)||(8741217-8741405)
chr1 (175-350)||(25543337-25543511)
chr1 (221-364)||(30678905-30679048)
chr1 (221-364)||(41948140-41948283)
chr1 (205-354)||(32211788-32211937)
chr1 (226-348)||(33193098-33193219)
chr1 (175-364)||(931371-931560)
chr1 (178-364)||(22540368-22540550)
chr1 (175-358)||(11135736-11135920)
chr1 (178-307)||(3872685-3872813)
chr1 (175-336)||(44271915-44272076)
chr1 (175-357)||(32848583-32848766)
chr1 (175-364)||(11430438-11430627)
chr1 (179-364)||(13114663-13114849)
chr1 (179-364)||(41095602-41095788)
chr1 (178-364)||(15523210-15523392)
chr1 (178-364)||(15531204-15531386)
chr1 (180-341)||(35336868-35337023)
chr1 (205-347)||(37552962-37553102)
chr1 (178-355)||(33059896-33060072)
chr1 (178-287)||(41917995-41918104)
chr1 (187-359)||(27570234-27570406)
chr1 (175-307)||(49730861-49730993)
chr1 (205-363)||(15928582-15928738)
chr1 (205-336)||(29673502-29673633)
chr1 (175-359)||(14093999-14094184)
chr1 (175-363)||(39019572-39019752)
chr1 (176-304)||(46335092-46335223)
chr1 (179-326)||(31074717-31074863)
chr1 (216-305)||(50539162-50539251)
chr1 (175-247)||(13388331-13388403)
chr1 (175-287)||(44739115-44739227)
chr1 (176-243)||(39039470-39039537)
chr1 (226-364)||(39974194-39974326)
chr1 (216-346)||(15468258-15468388)
chr1 (175-364)||(50773104-50773294)
chr1 (189-358)||(51732290-51732456)
chr1 (214-359)||(13388335-13388483)
chr1 (3-156)||(20491269-20491422)
chr1 (207-347)||(36566925-36567059)
chr1 (183-359)||(33113976-33114152)
chr1 (226-334)||(45179270-45179378)
chr1 (205-364)||(50424859-50425019)
chr1 (175-266)||(9165299-9165390)
chr1 (175-285)||(24436540-24436650)
chr1 (223-333)||(31866361-31866470)
chr1 (213-303)||(39499430-39499519)
chr1 (179-355)||(18157039-18157214)
chr1 (175-247)||(11135853-11135925)
chr1 (284-364)||(16948523-16948603)
chr1 (175-279)||(43851114-43851218)
chr1 (208-364)||(1093063-1093223)
chr1 (181-301)||(4578632-4578752)
chr1 (216-349)||(15660931-15661063)
chr1 (208-303)||(24911493-24911588)
chr1 (175-307)||(6325864-6325993)
chr1 (170-247)||(11430555-11430631)
chr1 (268-357)||(12767329-12767418)
chr1 (170-247)||(32848572-32848649)
chr1 (179-347)||(15906412-15906579)
chr1 (221-305)||(37525572-37525656)
chr1 (175-247)||(41095603-41095675)
chr1 (209-359)||(28109899-28110049)
chr1 (178-248)||(21466681-21466751)
chr1 (259-324)||(47644331-47644396)
chr1 (197-261)||(5602657-5602721)
chr1 (189-364)||(28274797-28274973)
chr1 (225-357)||(28941869-28942000)
chr1 (226-305)||(743467-743546)
chr1 (321-364)||(13889287-13889330)
chr1 (298-364)||(21466614-21466680)
chr1 (24-81)||(5212891-5212948)
chr1 (221-364)||(29418524-29418669)
chr1 (179-247)||(50773109-50773177)
chr1 (313-364)||(13114803-13114854)
chr1 (292-359)||(32848695-32848762)
chr1 (313-364)||(44739114-44739165)
chr1 (313-359)||(26980395-26980441)
chr1 (196-261)||(14341018-14341083)
chr1 (314-359)||(41095743-41095788)
chr1 (315-359)||(11135740-11135784)
chr1 (311-363)||(28274783-28274835)
chr1 (221-261)||(44760716-44760756)
chr1 (207-243)||(50308786-50308822)
chr1 (319-359)||(50539525-50539565)
[»] scaffold0018 (1 HSPs)
scaffold0018 (213-363)||(27847-27997)
[»] scaffold0204 (1 HSPs)
scaffold0204 (205-358)||(26862-27015)
[»] scaffold0543 (1 HSPs)
scaffold0543 (205-305)||(9691-9791)
[»] scaffold0492 (1 HSPs)
scaffold0492 (205-305)||(11237-11337)
[»] scaffold0838 (1 HSPs)
scaffold0838 (193-304)||(2237-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (193-304)||(2268-2377)
[»] scaffold0016 (1 HSPs)
scaffold0016 (256-362)||(204704-204810)
[»] scaffold0005 (2 HSPs)
scaffold0005 (174-363)||(296832-297022)
scaffold0005 (311-363)||(296833-296885)
[»] scaffold0194 (1 HSPs)
scaffold0194 (219-364)||(8405-8554)
[»] scaffold0099 (1 HSPs)
scaffold0099 (223-285)||(27358-27420)
[»] scaffold0250 (1 HSPs)
scaffold0250 (3-75)||(21416-21488)
[»] scaffold0054 (2 HSPs)
scaffold0054 (175-247)||(30907-30979)
scaffold0054 (214-287)||(30984-31057)
[»] scaffold0008 (1 HSPs)
scaffold0008 (311-363)||(121196-121247)
[»] scaffold0155 (1 HSPs)
scaffold0155 (216-287)||(35632-35703)


Alignment Details
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 395
Target Start/End: Complemental strand, 37777060 - 37776667
Alignment:
Q  1 atcatggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  37777060 atcatggtgcttttctccttgtcaaaactgagtagtttagtccaatctatgaagtatgtattggagaagctcttggtttattttcagcgttggattgggt 37776961  T
Q  101 tcatgggcttaatctaggacctatcgattttgagctggatgtaaagagagtggttggtagnnnnnnnnnataacgaggaatgctagcaacactcactttt 200  Q
    |||||  ||| |||| ||||||||||||||||||||||||||||||||||||||||||||         || | ||||||||||||||||||||||||||    
T  37776960 tcatgatcttgatctgggacctatcgattttgagctggatgtaaagagagtggttggtagtttttttttatcatgaggaatgctagcaacactcactttt 37776861  T
Q  201 caatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatt 300  Q
    ||| ||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37776860 caacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacctacaatgatt 37776761  T
Q  301 taaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctctttaagtaatgcaaagttcatggcttctat 395  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37776760 taaaccactaagagagtgagtattagagagggtgttcataaaagagtgttgctagcattactctc-ttaagtaatgcaaagttcatggcttctat 37776667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 28529250 - 28529436
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  28529250 gaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccact--gtgtgggttcaat 28529347  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||||||||| || ||||||||    
T  28529348 tttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttgttaacattactc 28529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 41452078 - 41451889
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| ||||||||||||||||||||| ||  ||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  41452078 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaat 41451979  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  41451978 tttcaaagagtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcattgctct 41451889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 175 - 351
Target Start/End: Complemental strand, 20493628 - 20493452
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20493628 gaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaat 20493529  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
     |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||    
T  20493528 attcaaagtgtagacccacaatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 24734702 - 24734891
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| ||||||||||||||||||||| ||  ||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  24734702 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaat 24734801  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| |||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  24734802 tttcaaagagtaggcccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcattgctct 24734891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 175 - 360
Target Start/End: Complemental strand, 52124139 - 52123954
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| ||  |||||||||||||| |||  ||| ||||||||||| ||||||||||| || | |||||| |||||||||    
T  52124139 gaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaat 52124040  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatta 360  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  52124039 tttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatta 52123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 175 - 363
Target Start/End: Complemental strand, 5452243 - 5452057
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| ||||||| || || | |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaat 5452144  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||| |||||||||||  ||| |||||||| || | |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  5452143 tttctaagtgtagacc--caaggatttaaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttgctagcattactc 5452057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 175 - 357
Target Start/End: Original strand, 27243042 - 27243225
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||| ||||||||||||||| ||||| || |||||||||| |||| ||||||||||||||| ||||||||| |||||| |||||||| ||||||||| ||    
T  27243042 gagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccat 27243141  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    || ||||||||| |||||||| |||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  27243142 ttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgctagca 27243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 46450064 - 46450251
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt-gtgtgggttcaa 273  Q
    |||||||||||||||||||||||||| || |||||||  |||||| ||||||||||| |||| ||||||||||||||| |||||||| |||||||||| |    
T  46450064 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttcta 46450161  T
Q  274 ttttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | || |||| |||||||||| ||||||    
T  46450162 tttgcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt-aaaatagagcgttgctagcactactct 46450251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 216 - 357
Target Start/End: Complemental strand, 18427292 - 18427153
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagaga 315  Q
    |||| |||| ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||    
T  18427292 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagaga 18427193  T
Q  316 gtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  18427192 gtgagtattagagagggtgttc--aagagagtgttgctagca 18427153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 20791296 - 20791482
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||  ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||| || | |||| ||||     
T  20791296 gaatgctagcaacgttcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 20791395  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| || ||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  20791396 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtggtgctagcactactct 20791482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 175 - 348
Target Start/End: Original strand, 46160946 - 46161117
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || |||||  |||||||| ||||||||||||||||||||||||  |||||| |||||||||||| ||||| ||    
T  46160946 gaggaatgctagcaacactcacttttgaacactct--ctagcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctat 46161043  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtg 348  Q
    || ||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||| ||  ||||||||    
T  46161044 ttccaaagtgtagatccataatgatttaaaccaataagagagtgagtattagagagagtgtccaagagagagtg 46161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 26310611 - 26310497
Alignment:
Q  193 tcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagaccca 292  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||    
T  26310611 tcacttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagaccca 26310512  T
Q  293 caatgatttaaacca 307  Q
     ||||||||||||||    
T  26310511 taatgatttaaacca 26310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 222 - 364
Target Start/End: Complemental strand, 29588869 - 29588727
Alignment:
Q  222 ctcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagt 321  Q
    |||||||||||||| |||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  29588869 ctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagt 29588770  T
Q  322 attagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||| |||||||||||| |||||| | || |||||||||||||    
T  29588769 gttatagagagtgttcaaaagagaattttactagcattactct 29588727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 55452196 - 55452037
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||||||||||||||||| || |||||||   | ||| |||||||||||||||| |||  |||||||||| |||||||||||||||||| ||    
T  55452196 gaggaatgttagcaacactcacttttgaacactctctg--gtactcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctat 55452099  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    || |||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||    
T  55452098 ttccaaagtgtagactcataatgatttaaaccaatgaaagagtgagtattagagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 8825150 - 8824983
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    |||||||||||||||||   ||||||||| ||| || |||||||| |||||||||||| ||||||| |||| ||| || |||||||||||||||||| ||    
T  8825150 caacactcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtcta 8825051  T
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
     || |||||| |||||||||| | ||||||||||||||| |||||||||||| || ||| ||||||||    
T  8825050 cactcacaataatttaaaccaataagagagtgagtattaaagagagtgttcaaaacagaatgttgcta 8824983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 350
Target Start/End: Original strand, 29755497 - 29755672
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| | ||||| || |||  |||||||||| | ||  ||||||| |||||   || ||||||||||||||||||    
T  29755497 gaggaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaat 29755596  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgtt 350  Q
    |||||||||||||| | |||||||||||||||| | |||| ||  ||||||||| ||||||||| |||||||||||    
T  29755597 tttcaaagtgtagatcaacaatgatttaaaccaataagagggtaggtattagagggagtgttcaaaagagagtgtt 29755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 14236019 - 14236205
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||| ||||||| | ||||  | ||||||| ||||||| ||| |||||||||||||||||||| ||||||| |||||||| || | |||| ||||     
T  14236019 gaatgctaccaacacttatttttgcacactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttc 14236118  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| ||||||| ||||| |||| | | | ||||||||||||| |||||||||| || ||||||||||||||| ||||||    
T  14236119 caaagtgtagatccacaataatttagaccaataaaaaagtgagtattagaaagagtgttcaaaacagagtgttgctagcactactct 14236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 48351433 - 48351622
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| ||||||||| |||| || ||||||| ||  ||  ||||||||||||||| |||||||| ||||||  || ||||||||||||||||||    
T  48351433 gaggaatgctaacaacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaat 48351532  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||| | ||| ||||||||||| || | |||||  |||||||||||| | |||||| |||||| ||| | ||||||||||||    
T  48351533 tttcaaagtgtatatccataatgatttaaatcaataagagaaagagtattagagaaaatgttcaaaagagaatgtcgttagcattactct 48351622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 176 - 358
Target Start/End: Complemental strand, 15790551 - 15790370
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    |||||||||| ||| ||||||||||||| ||| | |||| ||||||||  |||||||||| |||||||||||||||  |||| ||| ||  ||  |||||    
T  15790551 aggaatgctaacaaaactcacttttcaacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaatt 15790452  T
Q  276 ttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    |||||||||||| || | |||||||||||||| | ||||||||||||||||||||| | |||| || ||||||||||||||||    
T  15790451 ttcaaagtgtaggcc-ataatgatttaaaccaataagagagtgagtattagagagattattcaaaaaagagtgttgctagcat 15790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 37600313 - 37600128
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||| ||||| |  ||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  37600313 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 37600214  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||  |||||||| | || ||| ||| || ||||| | | |||||| ||  ||||||||||| ||| ||||||||||||||||||||    
T  37600213 ttctaaagtgtaggtcctacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcatt 37600128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 357
Target Start/End: Original strand, 46575945 - 46576126
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||| || ||||| |||||||| | |||| ||||| ||||||| ||||| |||||||||||| |||||||| ||||||||| ||    
T  46575945 gaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccat 46576044  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    ||||||| |||| | |||||| |||||||| ||  | ||||||||||||||| ||||||||||   || |||||||||||||||    
T  46576045 tttcaaaatgtacgccccacattgatttaaccctattagagagtgagtattaaagagagtgtt--gaaaagagtgttgctagca 46576126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 185 - 364
Target Start/End: Complemental strand, 50156831 - 50156654
Alignment:
Q  185 agcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtg 284  Q
    ||||||||||||||||||| || ||||     |||||||  ||||||| ||||||| ||||||||| | || |||||| | |||||||||||| ||||||    
T  50156831 agcaacactcacttttcaacacactctgat--acttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtg 50156734  T
Q  285 tagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||||||||||| | ||||||||||||||| | |||||||||| |||| ||||| | || |||||||||    
T  50156733 tagacccacaatgatttaaaccaataagagagtgagtattacaaagagtgttcaaaagaaagtgtcgataacattactct 50156654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 330
Target Start/End: Complemental strand, 10948730 - 10948588
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||||||||||||| ||| |||| |||||| |||  ||||||||| || || ||||||||| | ||||||||||||  |||||||||| ||||||||     
T  10948730 aacactcacttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaa 10948631  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagagag 330  Q
    |||||||||||||||||||| | | ||||||||||||| ||||    
T  10948630 acccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 171 - 305
Target Start/End: Complemental strand, 40716049 - 40715915
Alignment:
Q  171 taacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggtt 270  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||||||  | |||||| |||||||| |  | |||||||||||||||    
T  40716049 taacgagaaatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggtt 40715950  T
Q  271 caattttcaaagtgtagacccacaatgatttaaac 305  Q
    ||||||| ||| ||| |||  ||||||||||||||    
T  40715949 caatttttaaaatgttgacatacaatgatttaaac 40715915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 41387564 - 41387719
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||||| | ||||| |||||  |||||||| |||| |||||||||| ||||| |||||| ||  || | |||||||||||| |||||||    
T  41387564 aatgctagcaacactcattattcaacactct--ctagcactcactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttc 41387661  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||| |||||||||||||||||| | | | ||||| |||||||| |||||||||||    
T  41387662 aaagtgcagacccacaatgatttaatcaaataagagattgagtattggagagagtgtt 41387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 328
Target Start/End: Original strand, 22604570 - 22604710
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||| |||||| |||||||||| || |||| |||| |||||||||| |||| ||||||||||| |||| |||||| | |||||||||||||| |||||    
T  22604570 aacacttactttttaatactctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtag 22604669  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagag 328  Q
    || |||||||||||||||   | |||||||||| |||||||    
T  22604670 actcacaatgatttaaacttataagagagtgagaattagag 22604710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 19345132 - 19345051
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||| |||||||||||||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaacca 19345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 359
Target Start/End: Complemental strand, 54141080 - 54140891
Alignment:
Q  171 taacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggtt 270  Q
    ||||||| |||| || |||||||  ||||| |  ||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||||  |||||||    
T  54141080 taacgagaaatgttaacaacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggtt 54140981  T
Q  271 caattttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    | |||||||||||||| |  | ||| |||||| | ||| | |  ||||||||  |||||| |||| ||| ||||||||||||||||||||    
T  54140980 ccattttcaaagtgtaggttctacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcatt 54140891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 2419596 - 2419484
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatta 325  Q
    ||||||||||| |||||||| ||||||||||||||||  || |||| |||| ||| |||||||||||||||||||||||||| | ||| |||||||||||    
T  2419596 tttattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtatta 2419497  T
Q  326 gagagagtgttca 338  Q
     ||| ||||||||    
T  2419496 aagaaagtgttca 2419484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 50661700 - 50661576
Alignment:
Q  180 atgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttca 279  Q
    |||| |||||||||| ||||| || |||||||||| |||||||||||||||| ||| ||||||||| |||||| |||||||| ||||||||| |||| ||    
T  50661700 atgcaagcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttcca 50661601  T
Q  280 aagtgta-gacccacaatgatttaa 303  Q
    || |||| |||||||| ||||||||    
T  50661600 aaatgtatgacccacattgatttaa 50661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 359
Target Start/End: Complemental strand, 41707609 - 41707440
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||| |||||||| |  |||||||||| |||| ||||| | ||||||| ||||||||||||||   | |||||||||||||||||||||| ||||| |||    
T  41707609 aacattcacttttgagcactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatag 41707510  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||| |||||||||| | ||| | | ||| ||| |||||||||||| || | |||||||||||||||    
T  41707509 acccacaataatttaaacca-taagaaaataagtgttaaagagagtgttcaaaata-agtgttgctagcatt 41707440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 357
Target Start/End: Original strand, 13809083 - 13809261
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcactt-actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||||| |||||  | ||||||||||  |||| ||||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||     
T  13809083 aatgctagcaacactctcttttacacactctctcta--acttcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttc 13809180  T
Q  278 caaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||||| || |||||||| || ||||| ||| | ||||| ||| | ||||||| ||||| ||  | |||||||||||||||    
T  13809181 caaagtatatgacccacattgttttaacccaataagagaatgaatgttagagaaagtgtccaagaaagagtgttgctagca 13809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 46237220 - 46237128
Alignment:
Q  184 tagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    ||||||||||| ||||| |  ||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  46237220 tagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccattt 46237128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 330
Target Start/End: Complemental strand, 45515678 - 45515525
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| || |||| ||||||||| || |||||||| | |||| ||| |||||||||||||||||||||||| ||| | |||   ||||| |||||||    
T  45515678 gaggaatgttaacaacgctcactttttaacactctctccaacactcactattttattggatgaaatcaatgtatatcccatcacagagtgtgagttcaat 45515579  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagag 330  Q
    |||||||||||||||| |  ||||||| ||||| | ||||||||| ||||||||||    
T  45515578 tttcaaagtgtagaccta-tatgattt-aaccaataagagagtgaatattagagag 45515525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 10769908 - 10769723
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| |  |||||||||| |||  ||||||||||| | |||||||||||||||||| |||||||| | ||||||| ||    
T  10769908 gaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttccat 10769809  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||  |||||||| | || ||| |||||| | | | | | ||||| |||  ||||||||||| ||| |||||||||||  |||||||    
T  10769808 ttctaaagtgtaggtcctacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcatt 10769723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 44844026 - 44844167
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagt 321  Q
    |||||||||| || |||| ||||||||||| |||| ||  |||| |||||||||| |||||||| ||||||||||||||||| ||| | | | |||||||    
T  44844026 tcttttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagt 44844125  T
Q  322 attagagagagtgttcataagagagtgttgctagcattactc 363  Q
     |||||||||||||  | |||||||| |||||| ||||||||    
T  44844126 gttagagagagtgtcaaaaagagagtcttgctatcattactc 44844167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 355
Target Start/End: Complemental strand, 40702289 - 40702125
Alignment:
Q  189 acactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga 288  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||| ||||||||  | | |||||| ||||||||||||||| ||||| | ||    
T  40702289 acactcacttttcaacactctct--agcacttactcttttatatgatgaaattaatgtatgatccatcactttatgtgggttcaatttttaaagttttga 40702192  T
Q  289 cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
     ||||| | |||||||||| | | |   ||| |||||||||  || |||| ||||||||||||||||    
T  40702191 tccacagtaatttaaaccattaaaaatttgaatattagagaatgtattcaaaagagagtgttgctag 40702125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 364
Target Start/End: Original strand, 752461 - 752576
Alignment:
Q  247 atgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagag 346  Q
    |||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||||| | | ||||| ||||||||  | ||| |||||| || ||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatt--atagactgttcaaaacagag 752558  T
Q  347 tgttgctagcattactct 364  Q
    ||||||| ||||| ||||    
T  752559 tgttgctggcattcctct 752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 354
Target Start/End: Complemental strand, 24749062 - 24748913
Alignment:
Q  206 ctctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaa 304  Q
    ||||||||| |||| | |||||||| || ||| |||||||||||||| |||| ||| ||||||||| ||||  |||||||| | || ||| |||||| |     
T  24749062 ctctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcat 24748963  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    ||| | | ||||||||| |||||||||||| ||| |||||||||||||||    
T  24748962 ccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 38414708 - 38414813
Alignment:
Q  239 atcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttca 338  Q
    |||||||||||||| |||| |||||||||||| |||||| |||||||||| |||| || |||||||||| | ||||||||||| ||| ||||| || |||    
T  38414708 atcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagagaatgctca 38414807  T
Q  339 taagag 344  Q
     |||||    
T  38414808 aaagag 38414813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 138793 - 138921
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||| |||||||||||| ||||||||||||||||||  |||| ||||| ||  ||||||||| ||| |||| ||  ||||||||||||| ||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatca 138892  T
Q  308 ctgagagagtgagtattagagagagtgtt 336  Q
     | | ||||| ||||||| |||| |||||    
T  138893 ataaaagagtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 364
Target Start/End: Original strand, 742025 - 742140
Alignment:
Q  247 atgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagag 346  Q
    |||||| |||||||||||||| ||| ||||  ||||||||||||||||||||||||||| | | ||||| ||||||||| ||| |  ||||| || ||||    
T  742025 atgtcccaccactttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtattatagaca--gttcaaaacagag 742122  T
Q  347 tgttgctagcattactct 364  Q
    ||||||| ||||| ||||    
T  742123 tgttgctggcattcctct 742140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 24429124 - 24429050
Alignment:
Q  259 tttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagt 333  Q
    |||||| |||||||||||| |||||||||| |||||||||||||||||| | | | |||||||||||||||||||    
T  24429124 tttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagagt 24429050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 43657145 - 43657067
Alignment:
Q  209 tctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||| |||||||| |||| |||| |||| ||||||||||    
T  43657145 tctctagcactcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtag 43657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 2008992 - 2009120
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||| ||||||||| ||  |||||| ||   || ||||||||||  |||||||| ||||||||||| |||||||| ||| | |||| |    
T  2008992 gaggaatgctagcaacgctcactttttaaccctctctttattgctcactcttttatcagatgaaattaatgtatgtcc-accactttatgtagtttcagt 2009090  T
Q  275 tttcaaagtgtagacccacaatgatttaaa 304  Q
    ||| ||||||||||| |||||| |||||||    
T  2009091 ttttaaagtgtagactcacaataatttaaa 2009120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 363
Target Start/End: Complemental strand, 7640778 - 7640589
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||  |||||| |||||||| |||| ||||| ||||| || | |||||||||||||| ||||||||||||||||| ||  ||||   | ||    
T  7640778 gaggaatgctagggacactctcttttcaacactcactctaacacttgctttcttattggatgaaattaatgtatgtcctaccacattaagtggaacctat 7640679  T
Q  275 tttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    || | |||||| |||| |||  ||||| |||||| | ||  ||||||| || | ||||||||| | ||||||||||| |||||| |||||    
T  7640678 ttcctaagtgtgagactcaccttgattgaaaccaataaggaagtgagtgtttgtgagagtgttgaaaagagagtgttactagcactactc 7640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 29388687 - 29388614
Alignment:
Q  265 tgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttca 338  Q
    ||||||||||||||||||||||||| |||||||||||||  || | |||||||| || ||||||||||||||||    
T  29388687 tgggttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttca 29388614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 30624633 - 30624739
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||||||||||||||| |   | ||||||| |||| |||||||||||| || |||| |||||||||   ||||||||||||| ||||||||||    
T  30624633 gaatgctagcaacactcacttttga--gcactctctaacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaatttt 30624730  T
Q  278 caaagtgta 286  Q
    |||| ||||    
T  30624731 caaaatgta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 10769719 - 10769791
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||  ||||||| ||||| |  ||||||||||||||||||||||||||| |||||||||||||||    
T  10769719 gaggaatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgta 10769791  T

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Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 54140887 - 54140959
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  ||| ||||||||||| |||| ||||||||||||||||||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 363
Target Start/End: Original strand, 43016440 - 43016598
Alignment:
Q  207 tctctctagcacttactcttttattggatgaaatcaatgtat--gtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||| || | ||| |||||||  |||||||||||||||  |||  || ||| |||||  |||||||||| ||||| ||||  || |||||||||||    
T  43016440 tctctctaacattcacttttttattaaatgaaatcaatgtatatgtcgcactactctgtgttagttcaatttttaaagtatagattcataatgatttaaa 43016539  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
     || | ||||||||||||||| || | ||||||| || |||||||| ||||||||||||    
T  43016540 tcaataagagagtgagtattacagtgggtgttcaaaatagagtgtttctagcattactc 43016598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 29389193 - 29389103
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtggg 268  Q
    ||||||||||||||||||||||| |  |||| || || |||| ||||||| |||| || |||||||||||||||| |||||||||| ||||    
T  29389193 gaatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgtatggg 29389103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 39186028 - 39186150
Alignment:
Q  242 aatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataa 341  Q
    ||||||||||  |||||||| || | |||| |||| ||||||||||| |  |||||||||||| || | |||||| | ||||| |||||||| |||| ||    
T  39186028 aatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaa 39186127  T
Q  342 gagagtgttgctagcattactct 364  Q
    |||||||||| ||||| ||||||    
T  39186128 gagagtgttgatagcactactct 39186150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 21232705 - 21232604
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||| | ||||| |  ||| ||| ||||||| | | ||||||||| |||||||||||||||| | |||||||| ||||||||| ||    
T  21232705 gaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttccat 21232606  T
Q  275 tt 276  Q
    ||    
T  21232605 tt 21232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 49072057 - 49072134
Alignment:
Q  230 ttggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    ||||||||||| ||| ||||||  |||||||||| || |||  |||||||||||||||||||||||| ||||||||||    
T  49072057 ttggatgaaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaacca 49072134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 37600124 - 37600196
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||  ||||||||||||| |||| ||||||||    
T  37600124 gaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgta 37600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 52951543 - 52951475
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaa 243  Q
    ||||| |||||||||||||| ||||| || ||||||||||||||| ||||| | |||||||||||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 357790 - 357869
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||||||||| ||||||||||||   |||||||||||||| |  |||||||| ||||||||| |||| ||||||||||    
T  357790 ctctctagcactcactcttttattgagggaaatcaatgtatgcctcaccactttatgtgggttccatttccaaagtgtag 357869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 24748913 - 24748976
Alignment:
Q  184 tagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||| ||||| |  |||||||||| |||| |||||||||||||||||||||||||||    
T  24748913 tagcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 359
Target Start/End: Complemental strand, 38928190 - 38928007
Alignment:
Q  177 ggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    |||||||||||||||||  |||||    ||| ||||||| | | | ||||||||||| | |||||||||||| |||  | ||||| | ||||||| ||||    
T  38928190 ggaatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 38928091  T
Q  277 tcaaagtgtagaccc-acaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
     ||||||||||  |  ||| |||||| | ||| | | ||||||||| ||||||| |||| ||| ||||||||||||||||||||    
T  38928090 ccaaagtgtaggtcttacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcatt 38928007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 38138695 - 38138589
Alignment:
Q  245 gtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagag 344  Q
    |||| ||| |||| ||||||| | ||| || |||||||| |||| |||||||||||||||||| | ||||||| ||||||| | | |||| ||| |||||    
T  38138695 gtatatcccaccattttgtgtagtttctatcttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaataaagtgatcaaaagag 38138596  T
Q  345 agtgttg 351  Q
    |||||||    
T  38138595 agtgttg 38138589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 45779541 - 45779651
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| ||||| |||||||||||||||||||| || ||  | || |||||||| | | ||||||| || ||||    
T  45779541 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttggtttattatctgctctagaatgggttcacgagtttaatcttggtccta 45779640  T
Q  124 tcgattttgag 134  Q
    | |||||||||    
T  45779641 tggattttgag 45779651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 27243092 - 27243047
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  27243092 agagtgagtgttagagagagtgttcaaaagagagtgttgctagcat 27243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 29775136 - 29775202
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaa 243  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||  ||||||||||||| |||||||||    
T  29775136 gaggaatgctagcaacactctcttttgagcactctctctagcac--actcttttattgggtgaaatcaa 29775202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 38928006 - 38928075
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||||||| ||||| |  ||| |||||| |||| ||||||||||||| |||||||||||||    
T  38928006 gaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 52951446 - 52951377
Alignment:
Q  290 ccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||| |||||| | ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||    
T  52951446 ccacattgatttcatccaatgatagagtgagtatttgagagagtgttaaaaagagagtgttgctagcatt 52951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 55283236 - 55283167
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat 248  Q
    ||||||| |||||||||||||| || ||||||| || |||||| ||| ||||||||| ||||||||||||    
T  55283236 aatgctaacaacactcacttttaaacactctctttaacacttattctattattggataaaatcaatgtat 55283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 42340874 - 42340958
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaac 305  Q
    ||||||||||| || || || |||| |||||  |||||||||| | || | ||||||||||||| ||||||||||||||||||||    
T  42340874 actcttttattagaagatataaatgcatgtctcaccactttgtattggcttaattttcaaagtgcagacccacaatgatttaaac 42340958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 18722641 - 18722595
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcact 219  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||    
T  18722641 acgaggaatgctaacaacactcacttttctacactctctctagcact 18722595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 41607459 - 41607537
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||||||| ||||||| ||||||  || | |||||||| ||| ||||||||||||||||| ||||| | |||||||    
T  41607459 tttattggatgtaatcaatatatgtctcactattttgtgtgagtttaattttcaaagtgtagatccacagttatttaaa 41607537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 8087922 - 8087995
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttgg 76  Q
    |||||| ||||| |||||| ||||| ||| | | ||||||| || |||||||| ||||||||||||||||||||    
T  8087922 catggtacttttgtccttgccaaaattgattgggttagtcccatatgtgaagttcatattggagaagctcttgg 8087995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 35094177 - 35094108
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||| || ||||||||||| ||||||| ||| ||||| |||| | |||||||| |||||||    
T  35094177 actctctctagcatttgctcttttattgaatgaaattaatatatgttctactaatttgtgtgagttcaat 35094108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 37285318 - 37285435
Alignment:
Q  213 tagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgag 312  Q
    ||||||| ||| |||| || ||||||||  |||||||||  |||| ||| | ||||||  ||||| |||||| ||||||||||| |||||||||| | |     
T  37285318 tagcactcacttttttgttagatgaaattcatgtatgtcgcaccattttttatgggttttatttttaaagtgcagacccacaataatttaaaccaataaa 37285417  T
Q  313 agagtgagtattagagag 330  Q
    | ||| ||||||||||||    
T  37285418 aaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 52951476 - 52951537
Alignment:
Q  296 tgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||||| | ||| |||||||||||||  ||||||||||||| | ||||||||||||||||||    
T  52951476 tgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagca 52951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 36750974 - 36751106
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagaga 315  Q
    |||| ||||| ||| || ||||||||| || ||||||||||||||| ||| ||||  ||||  ||||||||||| |||| ||||| |||| | | |||||    
T  36750974 cactcactctcttactgaatgaaatcagtgcatgtcctaccactttatgtaggtttcatttctaaagtgtagactcacattgattaaaactaataagaga 36751073  T
Q  316 gtgagtattagagagagtgttcataagagagtg 348  Q
    || | | ||||||||| | | || |||||||||    
T  36751074 gtaaatgttagagagattatccaaaagagagtg 36751106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 52951376 - 52951444
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgt 246  Q
    ||||||||||||||||| ||||| || |||||||| |  ||| ||||| | ||||||||||||||||||    
T  52951376 gaatgctagcaacactctctttttaacactctctcaaatactcactctatcattggatgaaatcaatgt 52951444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 29718952 - 29718846
Alignment:
Q  257 actttgtgtgggttcaattttcaaagtgtagaccc-acaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    ||||| |||||||||||||||| |||||||||||| ||||| |||||||| | | | ||| | ||||||| | |  ||||||| |||||| || ||||||    
T  29718952 actttttgtgggttcaattttctaagtgtagacccaacaataatttaaactaat-aaagaataagtattaaataaggtgttcaaaagagaatgatgctag 29718854  T
Q  356 cattactc 363  Q
    ||||||||    
T  29718853 cattactc 29718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 40631194 - 40631257
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatca 242  Q
    ||||||| ||||||||||||||||| || ||||||| |||||||  ||||||||| | ||||||    
T  40631194 aatgctaacaacactcacttttcaacacactctctaacacttacatttttattggcttaaatca 40631257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 7419323 - 7419241
Alignment:
Q  213 tagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaa 295  Q
    ||||||| ||||||||||| ||| |||| ||| |||||||  | | |||||||| |||| |||| ||||||||||| ||||||    
T  7419323 tagcactcactcttttattagataaaataaatatatgtccctctattttgtgtgagttctatttccaaagtgtagatccacaa 7419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 20493579 - 20493629
Alignment:
Q  314 gagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| |||||||||||||| | ||| |||||||||||||||| ||||    
T  20493579 gagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcctct 20493629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 49418518 - 49418424
Alignment:
Q  260 ttgtgtgggttcaattttcaaagtgtagacccacaatga-tttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgct 353  Q
    |||||||||||  |||| ||| || |||||||| ||| | |||||| || | ||||||||| || |||||||| |||||| ||||||||||||||    
T  49418518 ttgtgtgggttatatttccaacgtttagacccataataaatttaaatcaataagagagtgaatactagagagaatgttcaaaagagagtgttgct 49418424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 18722572 - 18722535
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgt 263  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  18722572 tttattggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 37926561 - 37926690
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtg-tagacccacaatgatttaaacc 306  Q
    ||||||| |||| ||| | ||||| | ||||||||||||| ||||||| ||||| ||||||  | ||||||||||||   |||| ||| |||||||| ||    
T  37926561 ctctctaacactcactttcttattaggtgaaatcaatgtaggtcctactactttatgtgggacccattttcaaagtgcgggacctacattgatttaaccc 37926660  T
Q  307 actgagagagtgagtattagagagagtgtt 336  Q
    |   ||||||| ||| ||||||||| ||||    
T  37926661 aacaagagagtaagtgttagagagaatgtt 37926690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 39185237 - 39185306
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||| ||| |||||||||||||  | ||||||| ||||||| ||| ||||||| || ||||||||||||    
T  39185237 gaatgttagtaacactcacttttgcacactctctttagcactcactattttatttgaagaaatcaatgta 39185306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 43657870 - 43657938
Alignment:
Q  296 tgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| ||| | ||| ||||||| || || | |||||| | |||||||||||||||||||||||||    
T  43657870 tgatttaagccaattagaaagtgagtgttggaaacagtgttaaaaagagagtgttgctagcattactct 43657938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 53581124 - 53581204
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcat 104  Q
    |||||||| | ||||| || | ||||||| |||||| |||| ||||||||||| || || ||||| ||||| |||||||||    
T  53581124 aaaactgaatggtttactctagtctgtgaggtacatgttggtgaagctcttggattgttatcagctttggaatgggttcat 53581204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 55283151 - 55283103
Alignment:
Q  316 gtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||||||| |||| | || ||||||||| ||||||||||||    
T  55283151 gtgagtattagagagaatgtttaaaaaagagtgttgttagcattactct 55283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 179 - 364
Target Start/End: Original strand, 34905337 - 34905522
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  34905337 aatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttc 34905436  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  34905437 aaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttgctagcatcactct 34905522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 445815 - 445976
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||| ||||| ||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  445815 gaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaat 445914  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||||| ||||  ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  445915 tttcaaagtctagagtcacaatgatttaaaccaataagagaatgagtattagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 188 - 360
Target Start/End: Original strand, 5106308 - 5106480
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||||||||||||| ||| |||||| |||| ||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||     
T  5106308 aacactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtac 5106407  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatta 360  Q
    |||||||| ||||||||||| | | ||||||| |||||||||| ||||||| ||||| |||||| ||||||||    
T  5106408 acccacaaggatttaaaccaataatagagtgaatattagagagtgtgttcaaaagagggtgttgttagcatta 5106480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 178 - 351
Target Start/End: Complemental strand, 10133338 - 10133165
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| ||| |||||||||||||||| |||||||||| |||| |||| ||||||||||||||| | ||||||||| |||||||| || ||||||||||||    
T  10133338 gaatggtagaaacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaatttt 10133239  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
    ||||||||||| |||||||||||||||||| | | ||||||||||||| || |||| |||| ||||||||||||    
T  10133238 caaagtgtagaaccacaatgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttg 10133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 21987292 - 21987478
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||| ||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||| ||| |||||||| || | |||| ||||     
T  21987292 gaatgctaacaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttc 21987391  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| || ||||||||||||||| | ||| |||||||||||||||||||||||| ||||| ||| |||||||| ||||||    
T  21987392 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagggtggtgctagcactactct 21987478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 186 - 336
Target Start/End: Complemental strand, 31116296 - 31116146
Alignment:
Q  186 gcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    ||||||||||||||| || |||||||||| || | |||||| ||||||||||||||||||||||||| || |||||||||| |||| |||| ||| ||||    
T  31116296 gcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt 31116197  T
Q  286 agacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    | |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  31116196 aaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 1392630 - 1392813
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| ||| ||||||||||||| || |||||||  ||||||   | |||||||||||||||||||||||||||  || ||||||| || ||||||||||    
T  1392630 gaatgttagtaacactcactttttaacactctct--agcactctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttt 1392727  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||| ||||| ||||||||||||||||||| | ||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  1392728 taaaatgtag-cccacaatgatttaaaccaataagagagtgagtattagatagggtgttcaaaagagagtgttgctagcattactct 1392813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 16852105 - 16851967
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatta 325  Q
    |||||| |||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  16852105 tttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtatta 16852006  T
Q  326 gagagagtgttcataagagagtgttgctagcattactct 364  Q
    | |||  |||||| ||||||||||||||||| |||||||    
T  16852005 gggaggatgttcaaaagagagtgttgctagccttactct 16851967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 355
Target Start/End: Complemental strand, 12753943 - 12753763
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || ||||| | ||||| | ||||||| ||||||| ||||  ||| |||||| |||||||||||||||||| ||    
T  12753943 gaggaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctat 12753844  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    |||||  ||||| || ||||||||||||||| | | | |||| ||||||||||||||||||| | ||||||||||||||||    
T  12753843 tttcagggtgtacactcacaatgatttaaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttgctag 12753763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 19090398 - 19090213
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||| ||||| |  ||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  19090398 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 19090299  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    || ||||||||| | || ||| ||| || ||||| | | |||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  19090298 ttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 19090213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 32112850 - 32112725
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||  |||||||||||||||| ||||||||||||||| || | ||||||||| ||||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  325 agagagagtgttcataagagagtgtt 350  Q
    ||||||| |||||| |||||||||||    
T  32112750 agagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 2675891 - 2676053
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    ||||||| | |||||||||||| ||||||| | | | | || || | |||||||||||| ||||| ||||||||||||| |||||||||| | |||| ||    
T  2675891 cgaggaacggtagcaacactcatttttcaacattttttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaa 2675990  T
Q  274 ttttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||||| ||||||||||||||| ||||||||| | | | ||||||||||||||||||||||    
T  2675991 ttttcaaaatgtagacccacaatggtttaaaccaataaaaaagtgagtattagagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 32122796 - 32122953
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||| |||||||| |||||||| ||||| || | |||| |||  ||||||||||||||||||| ||||||| |||| |||||| | |||||||||||    
T  32122796 aatgctaacaacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttc 32122895  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||||||||||||||||||||| ||| | | | ||||| || |||||| ||||||    
T  32122896 aaagtgtagacccacaatgatttaagccaataaaaaagtgaataatagagatagtgtt 32122953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 207 - 362
Target Start/End: Complemental strand, 17144822 - 17144669
Alignment:
Q  207 tctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacc 306  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||| | |||  ||||||| |||| ||||||||||||||||||||||||||||||||||     
T  17144822 tctctctagcacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaact 17144723  T
Q  307 actgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    | | |  |||| ||||||| |||||||| |  ||| ||||||||| ||||||||||    
T  17144722 aataaaggagtaagtattaaagagagtggt--taaaagagtgttgttagcattact 17144669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 35128900 - 35128794
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaa 280  Q
    |||||||||||||| ||||| || ||||||||||||| | ||||||||||||| | |||||||||||||||| |||||||| ||||||||| ||||||||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  281 agtgtag 287  Q
    |||||||    
T  35128800 agtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 205 - 359
Target Start/End: Complemental strand, 19737588 - 19737433
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaa 303  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||| ||||||||  |||| ||||||||| | || ||| |||||| |    
T  19737588 actctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtaggtcctacattgatttga 19737489  T
Q  304 accactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
     ||| | | |||||||||  |||||||| |||||| ||||||||||||||||||||    
T  19737488 gccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcatt 19737433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 361
Target Start/End: Complemental strand, 12780897 - 12780758
Alignment:
Q  220 tactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtga 319  Q
    |||| ||||||| | || ||||||||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||||||||| | || || |||    
T  12780897 tacttttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatga 12780798  T
Q  320 gtattagagagagtgttcataagagagtgttgctagcattac 361  Q
     |||||||||| ||||||  || ||||| |||||||||||||    
T  12780797 atattagagagggtgttc--aaaagagtattgctagcattac 12780758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 363
Target Start/End: Original strand, 31443955 - 31444144
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    ||||||| |||||||||| | | ||||||| ||||| | || |||| | |||||||||||||||||| ||| ||||| | |||| ||||||| |||||||    
T  31443955 cgaggaaggctagcaacaataatttttcaacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaa 31444054  T
Q  274 ttttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||||| ||| ||||| ||||||||  | |||    |||| ||||||||||| ||||||  ||||||||||| || ||||||||    
T  31444055 ttttcaaagtgttgactcacaaggatttaaattaatgaacacgtgaatattagagagaatgttcaagagagagtgttgttaacattactc 31444144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 354
Target Start/End: Original strand, 10060856 - 10061036
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| || ||||| | || || | |||||||||||   ||||||||||||||||||  ||||||| ||||||||| ||    
T  10060856 gaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccat 10060955  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    |||||||||||| | || ||| |||| | | ||| | | | ||||||| |||||||||||| ||| |||||||||||||||    
T  10060956 tttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgcta 10061036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 230 - 364
Target Start/End: Complemental strand, 16187558 - 16187428
Alignment:
Q  230 ttggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagaga 329  Q
    |||||| ||||||||||||  || |||| |||||||  ||||||||||||||||||||||| ||||| |||||||||| | || |||||||||||||  |    
T  16187558 ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--a 16187463  T
Q  330 gagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| | ||||||||||||||| |||||||||    
T  16187462 gagtgttgaaaagagagtgttgctaacattactct 16187428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 338
Target Start/End: Complemental strand, 8442020 - 8441869
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||| |||||| ||||||| |||||||||| |||| |||| ||||||||||||||||| ||            ||||||| | |||||||    
T  8442020 gaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatcattg------------ctttgtgggagttcaat 8441933  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttca 338  Q
    ||||||||||||||||  |||| || ||||||| | | ||||||||||||||||||||||||||    
T  8441932 tttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttca 8441869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 338
Target Start/End: Complemental strand, 8450824 - 8450673
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||| |||||| ||||||| |||||||||| |||| |||| ||||||||||||||||| ||            ||||||| | |||||||    
T  8450824 gaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatcattg------------ctttgtgggagttcaat 8450737  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttca 338  Q
    ||||||||||||||||  |||| || ||||||| | | ||||||||||||||||||||||||||    
T  8450736 tttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttca 8450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 221 - 359
Target Start/End: Complemental strand, 32599085 - 32598947
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    |||||||||||||||| |||  ||||||||||  ||||||||||||||| | |||| |||||||||||  |||||||||||||| || | | ||||||||    
T  32599085 actcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtgag 32598986  T
Q  321 tattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||| ||||| |||| | |||||| |||||||| ||||    
T  32598985 tattaaagagaatgtttaaaagagaatgttgctaacatt 32598947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 6531481 - 6531369
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| |  |||||||| |||||| ||||||||||||| |||||||||||||||||| || ||||| |||| |||| ||    
T  6531481 gaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttccat 6531382  T
Q  275 tttcaaagtgtag 287  Q
    || | ||||||||    
T  6531381 ttccgaagtgtag 6531369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 16187776 - 16187650
Alignment:
Q  230 ttggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagaga 329  Q
    |||||| ||||||||||||  || |||| |||||||  ||||||||||||||||||||||| ||||| |||||||||| | || |||||||||||||  |    
T  16187776 ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--a 16187681  T
Q  330 gagtgttcataagagagtgttgctagcatta 360  Q
    ||||||| | ||||||||||||||| |||||    
T  16187680 gagtgttgaaaagagagtgttgctaacatta 16187650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 363
Target Start/End: Complemental strand, 12785072 - 12784934
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||||| || |||||||||||||| ||| ||||| |||  ||||||||||||||||||||| ||| |||||||||||||| | ||||| ||  ||||    
T  12785072 ttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagagaatggatatt 12784973  T
Q  325 agagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||| || || |||| |||| | | |||||||||||||||    
T  12784972 agaaagggtattcaaaagacaatattgctagcattactc 12784934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 364
Target Start/End: Original strand, 16436108 - 16436250
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||| |||  |||||||||||||||| || |||| ||||||||||||| ||||  |||||||||||||| || ||||||||||| | |  || |||     
T  16436108 actctttcattatatgaaatcaatgtatgccc-accattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataatcgactgaa 16436206  T
Q  321 tattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||| | |||||||| | ||||||||||||||| |||||||||    
T  16436207 tattaaaaagagtgtttaaaagagagtgttgctaacattactct 16436250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 363
Target Start/End: Original strand, 12690244 - 12690438
Alignment:
Q  170 ataacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggt 269  Q
    |||| ||||||||||||  ||||||  |||| || |||||||||| ||||| ||||||||||||||||||| |||| |||||  ||||||||  ||||      
T  12690244 ataatgaggaatgctagggacactctattttaaacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccactttaagtggaa 12690343  T
Q  270 tcaattttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    || |||| |||||||| ||||||||  |||||||||||| | ||  || |||| || |||||  |||| | |||||||| ||| |||||||||||    
T  12690344 tctatttccaaagtgtgagacccaccttgatttaaaccaataaggaagagagtgtttgagaggatgttgaaaagagagtattgttagcattactc 12690438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 4595769 - 4595850
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||  |||||||| | ||||||| ||||||||||||||    
T  4595769 actctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgta 4595850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 12327358 - 12327287
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    ||||||||||||| | |||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||    
T  12327358 actctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtgtgggttctattt 12327287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 19110649 - 19110532
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| ||||| |||||||||||||||||||| || ||  | || |||||||| | ||||||||| || ||||    
T  19110649 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttggtttattatctgctctagaatgggttcacgagcttaatcttggtccta 19110550  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  19110549 tggattttgagatggatg 19110532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 362
Target Start/End: Original strand, 13001692 - 13001876
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||| |||||||||||||||  |||||||||| || | | | ||| ||||||| |||| ||||||||||  | || ||| ||||| ||||||||     
T  13001692 gaatgctagtaacactcacttttcagcactctctctaacattcattttttcattggataaaataaatgtatgtcacatcattttatgtggattcaatttg 13001791  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    |||| |||| ||| | || ||||||||||| | | ||||||| ||||  ||||||  || | |||||||||| | ||||||||||    
T  13001792 caaaatgtaaacctataaagatttaaaccaataaaagagtgaatattgaagagagaatttaaaagagagtgtcgttagcattact 13001876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 19090209 - 19090281
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||| |||| ||||||||    
T  19090209 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgta 19090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 373396 - 373508
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| ||||| ||  |||| |  ||||||||||||||  ||| ||||||||| | |||||||||||||||| | |||||| ||||| ||| ||    
T  373396 gaggaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcactttatgtggattccat 373495  T
Q  275 tttcaaagtgtag 287  Q
    |||||||| ||||    
T  373496 tttcaaagggtag 373508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 2931576 - 2931660
Alignment:
Q  193 tcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||| |||||||||| || |  ||  |||||| ||||||||||||||||||||||||| ||||||  |||||||||||    
T  2931576 tcacttttcaacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 19737431 - 19737501
Alignment:
Q  177 ggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||| ||||| || | |||||||| |||| ||||||||||||| | |||||||||||    
T  19737431 ggaatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgta 19737501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 899943 - 900084
Alignment:
Q  228 tattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactga-----gag-agtgagt 321  Q
    ||||||||||||||||  ||||| | || | |||  | |||||||||||||| | | |||||||||||||| |||||||| | |     ||| ||| |||    
T  899943 tattggatgaaatcaacatatgttccactattttacgggggttcaattttcataatatagacccacaatgaattaaaccaataaaataggagtagtaagt 900042  T
Q  322 attagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  900043 attagagagagtgttcagaagagagtgtttctagtattactc 900084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 17226716 - 17226645
Alignment:
Q  171 taacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatca 242  Q
    ||||||||||| ||| |||||||| ||| | || ||||||| ||||| | ||||||||||||||||||||||    
T  17226716 taacgaggaatactaacaacactctcttctgaacactctctttagcattcactcttttattggatgaaatca 17226645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 9940387 - 9940427
Alignment:
Q  207 tctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  9940387 tctctctagcactcactcttttattgggtgaaatcaatgta 9940427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 12780930 - 12780894
Alignment:
Q  171 taacgaggaatgctagcaacactcacttttcaatact 207  Q
    ||||||||||||||| |||||||||||||||||||||    
T  12780930 taacgaggaatgctaacaacactcacttttcaatact 12780894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 373555 - 373504
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctacc 256  Q
    |||||||||| |||||||| ||||||||||| ||||||||||| | ||||||    
T  373555 actctctctaacacttactattttattggataaaatcaatgtaggacctacc 373504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 6109916 - 6109963
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggtt 270  Q
    |||||||||| || ||||||||| ||||||||||||||| ||||||||    
T  6109916 tcttttattgaataaaatcaatgcatgtcctaccactttatgtgggtt 6109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 35128867 - 35128900
Alignment:
Q  324 tagagagagtgttcataagagagtgttgctagca 357  Q
    ||||||||||||||| ||||||||||||||||||    
T  35128867 tagagagagtgttcaaaagagagtgttgctagca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 10061045 - 10060973
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||  ||||||||||| ||||| |  |||||||||| |||| ||| ||||||||| ||| |||||||||    
T  10061045 gaggaatattagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgta 10060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 12753755 - 12753811
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttatt 231  Q
    ||||||| |||||||||||| |||||||| ||||||||||  |||  ||||||||||    
T  12753755 gaggaatactagcaacactctcttttcaacactctctctaatactcgctcttttatt 12753811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 19305789 - 19305833
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||||||| |||||||| |||||| | ||||||||||||||||||    
T  19305789 agagtgaggattagagatagtgtttaaaagagagtgttgctagca 19305833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 94)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 26767944 - 26767755
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||    
T  26767944 gaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaat 26767845  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| ||||||| ||||||||||||||||| | | ||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  26767844 tttcaaattgtagactcacaatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgctagcattactct 26767755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 179 - 364
Target Start/End: Complemental strand, 6980299 - 6980114
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||    
T  6980299 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttc 6980200  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||| ||||||||||||||||| ||| | | ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  6980199 aaagtatagacccacaatgatttcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttgcaagcattactct 6980114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 179 - 370
Target Start/End: Original strand, 9470082 - 9470272
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||| ||||| |||||||  ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  9470082 aatgctagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttc 9470181  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctctttaa 370  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||||||||| || |||| ||||||||||||||||||| ||||| |||||    
T  9470182 aaagtgtagacccacaatgatttaaaccaataagagagtgaatattagagagggt-ttcagaagagagtgttgctagcatcactctttttaa 9470272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 175 - 357
Target Start/End: Original strand, 12989188 - 12989370
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| ||||||| |  |||| ||||||| |||||||||||||||||||||||| |||||||||| ||| ||| ||    
T  12989188 gaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctat 12989287  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    || | |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12989288 ttccgaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 12989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 176 - 357
Target Start/End: Original strand, 38464161 - 38464342
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    ||||||||||  |||| ||||||||||| |||||||||  || ||||| |||||||| ||||||||||||||||||  | ||||||| ||||||||||||    
T  38464161 aggaatgctaagaacattcacttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaatt 38464260  T
Q  276 ttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  38464261 ttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtattagagagagtgttcaaaagagagtattgctagca 38464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 178 - 360
Target Start/End: Original strand, 45554567 - 45554741
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||        |||||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caatttt 45554658  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatta 360  Q
    | |||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||| |||||||||||| || |||||    
T  45554659 ccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaagagagtgttgttatcatta 45554741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 179 - 364
Target Start/End: Original strand, 44274236 - 44274420
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||||||||||||  |  |||||||||| || | ||||||| ||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  44274236 aatgctagcaacactcactttg-agcactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttc 44274334  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||| |||||||||||||||||| | | ||||||||| ||||||||| | || | |||||||||||| ||||||| ||||    
T  44274335 aaagtgtagatccacaatgatttaaaccaataacagagtgagtgttagagagaatatttaaaagagagtgttgttagcattcctct 44274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 357
Target Start/End: Original strand, 10981515 - 10981695
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| || ||| |||||||||| || |||||||||| |||| ||| || ||||| ||||||  ||||||||||| |||||||||||||||||| ||    
T  10981515 gaggaatgataacaaaactcacttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctat 10981614  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    || ||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||   |||||||||||||||||    
T  10981615 ttccaatgtgtagacccacaatgatttaaaccaataagagagtgagtattagagggagtgttc--tagagagtgttgctagca 10981695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 11539420 - 11539583
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatca--atgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||| ||||||||| |||| || ||||| ||||||||| ||||||||||||||||||||||  |||||||| | | ||||||||||| ||||     
T  11539420 gaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttct 11539519  T
Q  273 attttcaaagtgtagacccacaa-tgatttaaaccactgagagagtgagtattagagagagtgt 335  Q
    |||||||||||||||| ||| || |||||||||||| | |||||||||||||||||||||||||    
T  11539520 attttcaaagtgtagatccagaattgatttaaaccaataagagagtgagtattagagagagtgt 11539583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 363
Target Start/End: Complemental strand, 36472021 - 36471833
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||| |||||||||||||||| |||||||||  |||| | ||| ||||||||||||||||| |||||||  |||||||| | ||| ||||||    
T  36472021 gaggaatgatagtaacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaat 36471922  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||| |||| || ||||||||||||||||| | | ||||||||||||||||||||| || | ||  |||| |||||||||||||||    
T  36471921 tttcaaaatgtaaactcacaatgatttaaaccaataaaagagtgagtattagagagagtcttaaaaaaggagttttgctagcattactc 36471833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 18511392 - 18511260
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || |||||| ||| |||| ||||||||||||||| |||||||||||||||| || | ||| ||||||||||||    
T  18511392 gaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaat 18511293  T
Q  275 tttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||| ||||| |||||| |||||||||    
T  18511292 tttcaaagtgaagacctacaatgttttaaacca 18511260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 32856322 - 32856129
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctag----cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggtt 270  Q
    ||||||||||| |||||||||||||| || |||||||| ||    |||| |||||||||| ||||||||| ||| |||||   |||||||||||||||||    
T  32856322 gaggaatgctaacaacactcacttttgaacactctctccagtacgcactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggtt 32856223  T
Q  271 caattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||||||||||||||||| ||| | |||||||||||| | ||||| ||||||||||| || ||||||| || |||||||||||| |||| ||||    
T  32856222 gaattttcaaagtgtagatccatagtgatttaaaccaataagagattgagtattagaaagggtgttcaaaatagagtgttgctaacatttctct 32856129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 28898220 - 28898035
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||  |||| |  ||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||  ||    
T  28898220 gaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcat 28898121  T
Q  275 tttcaaagtgtaga-cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    || ||||||||||| || ||| |||||| | ||| | | |||||||||  || |||||||  ||| ||||||||||||||||||||    
T  28898120 ttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcatt 28898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 16719609 - 16719481
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||||||||||||| ||| ||| |||||| |||||||||||| |||||||||||||||| ||| |||| ||  ||| ||||||||||||    
T  16719609 aatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttc 16719510  T
Q  279 aaagtgtagacccacaatgatttaaacca 307  Q
    ||| ||||||||| |||||||||||||||    
T  16719509 aaaatgtagacccgcaatgatttaaacca 16719481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 356
Target Start/End: Complemental strand, 34142319 - 34142141
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| |||||||||| ||||||||| | |||||| | || | ||| ||||||||||||||||  |||||||||  || |||||||||||||||||||||    
T  34142319 gaatgttagcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaatttt 34142220  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    |||||||||||  ||||||| ||||||||| | ||||||||| ||||| ||| | | |||  |||||||||||||||||    
T  34142219 caaagtgtagagtcacaatggtttaaaccaataagagagtgaatattaaagaaaatattctaaagagagtgttgctagc 34142141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 359
Target Start/End: Original strand, 42182889 - 42183071
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||     
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 42182988  T
Q  278 caaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||| | || ||| |||||| | ||| | | ||||| |||    ||||||||||||| ||||||||||| ||||||||    
T  42182989 caaagtgtaggtcctacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcatt 42183071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 4964856 - 4964671
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||| || ||||| | |||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||| ||||| ||  ||    
T  4964856 gaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcat 4964757  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||||| | || ||| |||| | | ||| | | |||||||||  |||||||||| |||| |||||||| |||||||||||    
T  4964756 tttcaaagtgtaggtcctacattgatcttatccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 19639090 - 19639278
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| || | ||||||||| || |||||||| |||| | ||| ||||||| |||||||||||||||||||  | ||| | ||||| |||||||    
T  19639090 gaggaatgctaacagcgctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaat 19639189  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||| ||||| |||||||||||||||| | ||||||||| ||||| ||||  | |||| |||| | ||||| |||||||||||    
T  19639190 tttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagaggctattcaaaagaaaatgttgttagcattactc 19639278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 19837683 - 19837871
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| || | ||||||||| || |||||||| |||| | ||| ||||||| |||||||||||||||||||  | ||| | ||||| |||||||    
T  19837683 gaggaatgctaacagcgctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaat 19837782  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||| ||||| |||||||||||||||| | ||||||||| ||||| ||||  | |||| |||| | ||||| |||||||||||    
T  19837783 tttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagaggctattcaaaagaaaatgttgttagcattactc 19837871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 17188062 - 17188194
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    |||||||||| || |||||||||||||||||  ||||||||| |||| ||| |||||||||||||||||||||| | ||  |||||||||||||   |||    
T  17188062 acgaggaatgttaccaacactcacttttcaa--ctctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactca 17188159  T
Q  273 attttcaaagtgtagacccacaatgatttaaacca 307  Q
    ||||||||||||||| |||| ||||||||||||||    
T  17188160 attttcaaagtgtaggcccagaatgatttaaacca 17188194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 3804585 - 3804711
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgt-cctaccactttgtgtgggttcaatttt 277  Q
    ||||||||| ||||||||||||||| ||||||| || || | |||||||||||||||||||||||||||||| || | |||||| ||| |||| ||||||    
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaatttt 3804684  T
Q  278 caaagtgtagacccacaatgatttaaa 304  Q
    ||||||||| ||||||||| |||||||    
T  3804685 caaagtgtacacccacaataatttaaa 3804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 172 - 364
Target Start/End: Complemental strand, 12099053 - 12098862
Alignment:
Q  172 aacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttc 271  Q
    ||||||||||| ||||||||||| ||||||||   ||||| ||||| |  || ||||||| ||||||||||| |||||||   ||||||||| || ||||    
T  12099053 aacgaggaatgttagcaacactctcttttcaactttctctttagcattcgctattttatttgatgaaatcaaagtatgtctcgccactttgtatgagttc 12098954  T
Q  272 aattttcaaagtgtagacccac-aatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||| || ||| |||||||||||| | | ||||||||||||||  | |||||||||  || ||| ||||||||||||||||||    
T  12098953 aattttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtatt--aaagagtgttccaaatagaatgttgctagcattactct 12098862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 15884471 - 15884614
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagaga 315  Q
    ||||||||||||||||||| |||||||||||    || |||||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||| |    
T  15884471 cacttactcttttattggacgaaatcaatgt----cccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataagata 15884566  T
Q  316 gtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
     |||||||||||||  ||| ||| ||||||| || |  ||||||||||    
T  15884567 atgagtattagagattgtggtcaaaagagagcgtcgtcagcattactc 15884614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 35316538 - 35316397
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||||||| ||| |||| ||||||||||| |||| ||| ||| | ||||||||| ||| |||||||||||||||||||||| || | ||||||||||    
T  35316538 actcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagagtgag 35316439  T
Q  321 tattagagagagtgttcataagagagtgttgctagcattact 362  Q
    ||| | | |||||| ||| ||||||||||| |||||||||||    
T  35316438 tatcataaagagtgctcaaaagagagtgttactagcattact 35316397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 370
Target Start/End: Original strand, 15508911 - 15509107
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||||||||||| ||||| || ||||| |||| |||| ||||||||||||  |||||||||||||||||| |||| ||| ||||||||| ||    
T  15508911 gaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccat 15509010  T
Q  275 tttcaaagtgtaga-cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctctttaa 370  Q
    || ||||||||||| || ||| |||||| | ||| | | ||||| |||  || |||||||| | | ||||||||||||||| |||| |||| |||||    
T  15509011 ttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtgatatagagagtgctaaaaagagagtgttgctaacattcctctttttaa 15509107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 335
Target Start/End: Complemental strand, 30718497 - 30718350
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    ||||||||| |||| || | ||||||||| ||| ||||||||||||||||||||| || ||||||| | || ||||||||| ||  ||||||||||||||    
T  30718497 caacactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgtcc-atcattttgtgtggattgtattttcaaagtgta 30718399  T
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgt 335  Q
    ||| ||||||||||||||||| | | | ||||| |||||||||||||||    
T  30718398 gactcacaatgatttaaaccaataaaaaagtgaatattagagagagtgt 30718350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 363
Target Start/End: Complemental strand, 37652420 - 37652240
Alignment:
Q  183 ctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaag 282  Q
    |||||||||||||| |||||| ||| | | ||||||||||| ||||||| |||||||||||||||||| | ||| ||||||||  ||||||||| ||| |    
T  37652420 ctagcaacactcacatttcaacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacg 37652321  T
Q  283 tgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||  ||||||||||||||||| | | | ||||| ||| ||||||| |||||| | ||||  |||| ||| |||||||    
T  37652320 tgtagattcacaatgatttaaaccaataaaaaagtgaatataagagagaatgttcaaatgagatggttggtagtattactc 37652240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 7919447 - 7919311
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||||||||||||| || | |  |||||  ||||||||| | || ||||  |||||||  |||||| |||||||||||||| ||||||||||    
T  7919447 aatgctagcaacactcacttttgaacatttcctctaatacttactctctcatgggatacaatcaat--atgtcccaccactttgtgtggattcaattttc 7919350  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagt 317  Q
    |||||||||| |||||||||||||||||| | |||||||    
T  7919349 aaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 173 - 355
Target Start/End: Original strand, 2122790 - 2122972
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    |||||| |||||||||||||||||||||||||||| |||||| || | ||||||| || |||||||||||||||||||   |||||||||| ||  |||     
T  2122790 acgaggtatgctagcaacactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgtatgcattct 2122889  T
Q  273 attttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    ||||  | ||||||    ||| |||||||||| || | ||||||||||||  ||||| | |||||| || |||||||||||||    
T  2122890 atttctagagtgtaagttcactatgatttaaatcaataagagagtgagtaccagagaaaatgttcaaaaaagagtgttgctag 2122972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 2476533 - 2476659
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||| ||| |||||||||||||||| || |||||||||   ||||||    
T  2476533 gaggaatgctactaacactcacttttcaacattctc--tagcacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaat 2476630  T
Q  275 tttcaaagtgtagacccacaatgatttaa 303  Q
    ||||||| |||||||  | ||||||||||    
T  2476631 tttcaaaatgtagacttataatgatttaa 2476659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 33678298 - 33678138
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || ||||| | || |||||| ||||| |||| |||||||||||||||| || |||||  || |||||||| ||    
T  33678298 gaggaatgctagcaacactcacttttgaacactctttataacacttattctttaattgaatgaaatcaatgtatgcccaaccac-atgcgtgggttctat 33678200  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||  || |||||||| |||||| |||||||||| | | | ||||| |||||||||| |||||    
T  33678199 ttcaaatgtgtagactcacaataatttaaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 354
Target Start/End: Original strand, 1110195 - 1110375
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||  |  | |||||||| |||| ||||||||||||  |||||||||||||||||| |||||||| ||||||||| ||    
T  1110195 gaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccat 1110294  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    || |||||| || | || ||| |||||| | ||| | | ||||||| | ||||| |||||| ||| || ||||||||||||    
T  1110295 ttccaaagtatatgtcctacattgatttcacccaataaaagagtgaatgttagaaagagtgctcaaaaaagagtgttgcta 1110375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 4603046 - 4602890
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||| ||||||||||||||||||||  ||| || | | ||| |||||||||||||||||||||||| ||||| | | |||||||| |  ||||||||||     
T  4603046 aatgttagcaacactcacttttcaacgctccctttggtactcactcttttattggatgaaatcaatatatgttccatcactttgttt--gttcaattttt 4602949  T
Q  279 aaagtgtagacccacaatgatttaaacc-actgagagagtgagtattagagagagtgtt 336  Q
    |||||| ||||| | |||||||||||||  |  ||||||||| ||||||||||||||||    
T  4602948 aaagtgcagacctataatgatttaaaccgccaaagagagtgactattagagagagtgtt 4602890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 356
Target Start/End: Original strand, 37228499 - 37228678
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatg-aaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||| || |||| ||||||||||| |||||||| |||||||||  ||||    
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttccgtttt 37228598  T
Q  278 caaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    ||||||| | | || ||| |||||| | ||| | | | |||||||  |||| |||||| ||| |||||||||||| ||||    
T  37228599 caaagtgcaggtcctacattgatttcacccaataaaaaagtgagtgctagaaagagtgctcaaaagagagtgttggtagc 37228678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 43414394 - 43414538
Alignment:
Q  217 acttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagag 316  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||| ||  || | ||||||| ||| |||| ||||||||||||||||||   |||| |    
T  43414394 acttacttttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagaggg 43414493  T
Q  317 tgagtattagagagagtgttc-ataagagagtgttgctagcattact 362  Q
    ||||||||  || |||||||| | |||||||||||| ||||||||||    
T  43414494 tgagtatt--agtgagtgttcaaaaagagagtgttgatagcattact 43414538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 357
Target Start/End: Complemental strand, 25238411 - 25238278
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactt-tgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtat 323  Q
    ||||||| ||| |||||||||||||||  | ||||| | ||||||||| |||||||||||||||| |||||||||||||||||| | | | |||||||      
T  25238411 ttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgc 25238312  T
Q  324 tagagagagtgttcataagagagtgttgctagca 357  Q
    |||||| |||||| | |||||||||||| |||||    
T  25238311 tagagaaagtgtttaaaagagagtgttgttagca 25238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 24497189 - 24497375
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||| |||| |||||||||||||| |  ||||||| || || |  || |||||||||||||||  ||||||||| | | || ||||||||| ||  ||    
T  24497189 gaggaaggctaacaacactcacttttgaccactctctttaacagtcgcttttttattggatgaaactaatgtatgttccatcattttgtgtggattttat 24497288  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||||||||| | | |||||||||| | |  |||||||||||||  |||||||||| |  ||||||||||| ||||| |||||    
T  24497289 tttcaaagtgtagaccaagagtgatttaaactaataggagagtgagtatt--agagagtgtttaagagagagtgttgttagcactactc 24497375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 28898034 - 28898103
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||||||| ||||| | |||||||| ||||||| |||||||||||||||||||||||||||    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 221 - 352
Target Start/End: Complemental strand, 24895404 - 24895272
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagagtga 319  Q
    ||||||||| ||||| |||||||||||| | | |||| ||| |||| |||| |||| ||||||||| |||||||| |||||||| ||| ||| |||||||    
T  24895404 actcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaagagtga 24895305  T
Q  320 gtattagagagagtgttcataagagagtgttgc 352  Q
    || ||||||||||| | || ||||||| |||||    
T  24895304 gtgttagagagagtatccaaaagagagagttgc 24895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 31395628 - 31395516
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||||||||||| ||||| |  ||||||| ||||||| |||| |||||||| ||||||||||||||||||  ||||||| ||||| ||| ||    
T  31395628 gaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattccat 31395529  T
Q  275 tttcaaagtgtag 287  Q
    || || |||||||    
T  31395528 ttccatagtgtag 31395516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 32701467 - 32701599
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||| | || ||| ||||||| ||| | | |||||  |||||||||||||||| |||||||||||| ||| |||||||| |||  |||||||    
T  32701467 gaggaatgctagtatcattcatttttcaacactttttttagcaactactcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaat 32701566  T
Q  275 tttcaaagtgtagacccacaatgatttaaacca 307  Q
    ||| || ||||| | ||| ||||||||||||||    
T  32701567 ttttaacgtgtaaatccataatgatttaaacca 32701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 225 - 364
Target Start/End: Original strand, 38104295 - 38104434
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtat 323  Q
    ||||||||||| |||||||||||||| | |||||||| | ||||||| |||  ||||||||| |||||||| ||| ||||  || ||||||||||||| |    
T  38104295 ttttattggataaaatcaatgtatgttccaccactttatttgggttccattcccaaagtgtatgacccacattgaattaattcaatgagagagtgagtgt 38104394  T
Q  324 tagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||| ||  | ||||||| |||||||||| ||||||    
T  38104395 tagagagag-gtctaaaagagagggttgctagcactactct 38104434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 27634909 - 27635060
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttc 102  Q
    |||||| ||||| |||||| ||||||||| | ||||||||| || |||||||| ||||||| |||||||||||| ||  |||||||  | || ||||| |    
T  27634909 catggtacttttgtccttgccaaaactgattggtttagtcccatatgtgaagttcatattgaagaagctcttgggttgatttcagcactagagtgggtgc 27635008  T
Q  103 atgggcttaatctaggacctatcgattttgagctggatgtaaagagagtggt 154  Q
    ||| ||| ||  | |||||||| || |||||| ||||||| |||||||||||    
T  27635009 atgagctcaacttgggacctattgactttgagatggatgtgaagagagtggt 27635060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 472264 - 472158
Alignment:
Q  257 actttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    |||||||||| |||||||||||||| | || | |||||||||||||||||| | |||||| |||||||| |||||||| ||| |||| | |||| ||| |    
T  472264 actttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagtattaaagagagtgctcaaaagaaattgtttctaac 472165  T
Q  357 attactc 363  Q
    |||||||    
T  472164 attactc 472158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 1107039 - 1107121
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    |||| ||||||||||| ||||| |  ||||||||||||||  ||||||||||||| |||||||||||||||||| ||||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 1107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 4552925 - 4552843
Alignment:
Q  273 attttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    |||||||| |||||||||||||||||||||||||| | ||||||||||||| ||| | | |||||| ||| ||||||||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttgctag 4552843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 359
Target Start/End: Complemental strand, 19193683 - 19193501
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||  |||||| |||||||| |||||||  | |||| | ||| ||||||||| ||| ||||||||| || ||||||||  |||    | ||||     
T  19193683 gaatgctagagacactctcttttcaacactctcttgaacactcattctcttattggataaaaccaatgtatgacccaccactttaagtgaaacctatttc 19193584  T
Q  278 caaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||| | |||||||| ||||||||||| | | ||| ||||||| || ||||||||||| | ||||||||||||||||||||    
T  19193583 caaagtatgagacccaccatgatttaaactaattagaaagtgagtgttggagagagtgttgaaaagagagtgttgctagcatt 19193501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 19953440 - 19953582
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagt 321  Q
    ||||||||||||||||| ||||||||| || ||||||||  ||||   | |||| |||||||| |||| ||| ||||||||| ||| | | | |||||||    
T  19953440 tcttttattggatgaaaccaatgtatgacccaccactttaagtggaacccatttccaaagtgtgagactcactatgatttaatccaataaaaaagtgagt 19953539  T
Q  322 attagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| |||| | |||| | |||||||||||||||||||||||||    
T  19953540 attggagaaaatgttaaaaagagagtgttgctagcattactct 19953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 329
Target Start/End: Complemental strand, 27494634 - 27494480
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| ||||| | | ||||||| ||| | | ||| | ||| | |||||||||||||||||||||| ||| | |||| ||| | | |||||| |    
T  27494634 gaggaatgctaacaacatttatttttcaacactatttttagtatttatttttttattggatgaaatcaatgtttgttccaccaatttatataggttcact 27494535  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagaga 329  Q
    ||||||||  ||||||| |||||||||||| || | | |||||||||||||||||    
T  27494534 tttcaaagcatagacccgcaatgatttaaatcaataaaagagtgagtattagaga 27494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 13911949 - 13911832
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| ||||| |||||||||||||||||||| || ||  | || |||||||| | ||||||||| || ||||    
T  13911949 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttggtttattatctgctctagaatgggttcacgagcttaatcttggtccta 13911850  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  13911849 tggattttgagatggatg 13911832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 4964671 - 4964739
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||| | |||||||||    
T  4964671 aatgctagcaatactctcttttgaatactctctctagcactcactcttttattggataagatcaatgta 4964739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 37719831 - 37719903
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||||||| || ||||| |  ||||| ||||||||| |||||||||||||||||||||||||||    
T  37719831 gaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 41805959 - 41805873
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    ||||||||||||||||||||  ||||  | ||| ||| || |||| ||||||||||||||| |||||||||||||||| ||||||||    
T  41805959 gaggaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 27968919 - 27968980
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaat 240  Q
    |||||||||||||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  27968919 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 28091668 - 28091607
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaat 240  Q
    |||||||||||||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  28091668 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 28101900 - 28101839
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaat 240  Q
    |||||||||||||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  28101900 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 303
Target Start/End: Complemental strand, 41546210 - 41546082
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||| ||||| |||||||| |||||||| | || | ||||| |||||||||| ||||||| |||||||  |||||||  ||| |||| ||    
T  41546210 gaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtcccgccactttacgtgagttccat 41546112  T
Q  275 tttcaaagtgtag-acccacaatgatttaa 303  Q
    |||||||  |||| ||||||| ||||||||    
T  41546111 tttcaaaacgtagaacccacattgatttaa 41546082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 45270735 - 45270607
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||| ||||| ||||||||||| | | |||||| |||| ||| ||||||||||| |||| |||||||||   || | ||||||||  ||| |||||    
T  45270735 gaatgctatcaacattcacttttcaacattttctctaacact-acttttttattggataaaattaatgtatgtatcactattttgtgtgaattcgatttt 45270637  T
Q  278 caaagtgtagacccacaatgatttaaacca 307  Q
     |||||||| || |||||||||||||||||    
T  45270636 gaaagtgtaaactcacaatgatttaaacca 45270607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 42183075 - 42183003
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||| ||||||| ||||| || ||||||||  ||||| ||||||||||||| |||||||||||||    
T  42183075 gaggaatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgta 42183003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 14489626 - 14489539
Alignment:
Q  271 caattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    ||||||| |||||||||| ||||||| |||||||||| | | ||| ||||||||||||| | | |||| |||||||| ||||||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaattttcaaaagagagtcttgctagcat 14489539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 11729777 - 11729715
Alignment:
Q  184 tagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgt 246  Q
    |||||||||||||||||||| ||||| |||| || ||| |||||||||| |||||||||||||    
T  11729777 tagcaacactcacttttcaacactctttctaacatttattcttttattgaatgaaatcaatgt 11729715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 365
Target Start/End: Complemental strand, 25730602 - 25730432
Alignment:
Q  195 acttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccaca 294  Q
    |||||| || ||||| |||| |||| ||| |||||||||||| |||  |||||||||  ||||  || ||||||||| ||||| || ||||| || ||||    
T  25730602 acttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcaca 25730503  T
Q  295 atgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctc 365  Q
     |||||||||||| | | ||||||| ||||| | | | |||| | |||||  ||||||||||| |||||||    
T  25730502 gtgatttaaaccaataaaagagtgaatattaaaaaaaatgtttaaaagagcatgttgctagcactactctc 25730432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 364
Target Start/End: Original strand, 43400146 - 43400320
Alignment:
Q  191 actcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-agac 289  Q
    |||| |||||||| |||||||||| |||| ||| | |||||||||||||  | ||||||||| ||||||||  ||||   | ||| |||| |||| | ||    
T  43400146 actctcttttcaacactctctctaacactcactttcttattggatgaaactagtgtatgtcccaccactttaagtggaacctattatcaatgtgtgaaac 43400245  T
Q  290 ccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||  |||||||||||| | | | | ||||| ||   ||||||||| | |||||||||||||||||||||||||    
T  43400246 ccaccttgatttaaaccaataataaaatgagtgtttaggagagtgttgaaaagagagtgttgctagcattactct 43400320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 10339767 - 10339857
Alignment:
Q  177 ggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggt 269  Q
    ||||||||||||||| ||  |||| || ||||||||||||||| ||| |||||||||   ||||||||| |||||| |||||||| |||||||    
T  10339767 ggaatgctagcaacaatc--ttttgaacactctctctagcactcactattttattggggaaaatcaatgaatgtcccaccactttatgtgggt 10339857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 20951603 - 20951673
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |   | |||||||||||||| ||||||||||| |||||||||||||    
T  20951603 gaggaatgctagcaacactctcttttga--gcactctctagcacttattcttttattgggtgaaatcaatgta 20951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 354
Target Start/End: Original strand, 30849284 - 30849412
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||| ||||||||||||||| |||| |||| ||||| ||||||| ||||| ||||  || | ||||||||||||||| || | ||| |||| |||||    
T  30849284 ttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatt 30849383  T
Q  325 agagagagtgttcataagagagtgttgcta 354  Q
    | | |||||  ||| || ||||||||||||    
T  30849384 aaaaagagt-atcaaaaaagagtgttgcta 30849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 364
Target Start/End: Original strand, 31494211 - 31494393
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaa 280  Q
    |||||||||||||| |||||||| |||||||  | |||| ||||| |||||||||||||  ||||||||||| || |||||  ||||   | |||| |||    
T  31494211 tgctagcaacactctcttttcaacactctct--aacactcactctcttattggatgaaaataatgtatgtcccactactttaagtggaacccatttccaa 31494308  T
Q  281 agtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     |||| ||||||||  |||||||| ||| | |   ||||||| ||   ||||||||| | |||||||||||||||||| ||||||    
T  31494309 tgtgtgagacccaccttgatttaagccaataatgaagtgagtgtttaggagagtgttgaaaagagagtgttgctagcactactct 31494393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 44674593 - 44674686
Alignment:
Q  227 ttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagt-gtagacccacaatgatttaaaccactgagagagtga 319  Q
    ||||||||||||||||||||| ||| ||||||||| |||||  || ||||||||||| | |||||| || |||||||| ||| | |||||||||    
T  44674593 ttattggatgaaatcaatgtaggtcttaccactttatgtggaatccattttcaaagtaggagacccgcattgatttaatccaataagagagtga 44674686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 15509100 - 15509028
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||| ||||||||||| ||||| |  ||||||| || |||||||||||| ||||| |||||||||||||    
T  15509100 gaggaatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgta 15509028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 19427425 - 19427320
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||||||||| ||||| || |||||||  |||||| ||||| | ||||||||||||||||||     | |||||||| |||||| || |||||    
T  19427425 gaatgctagcaacactctctttttaacactctct--agcactcactctatcattggatgaaatcaatgtggactccaccactttatgtgggatccatttt 19427328  T
Q  278 caaagtgt 285  Q
    ||||||||    
T  19427327 caaagtgt 19427320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 25666764 - 25666700
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtc 251  Q
    ||||||||| ||||||| |||||||| | || | |||||||||| ||||||||||||||||||||    
T  25666764 caacactcatttttcaacactctctcaaacattcactcttttatcggatgaaatcaatgtatgtc 25666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 37398808 - 37398880
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||||||||||  |||| |  | |||||||| |||||||| ||||||||||||||||| |||||    
T  37398808 gaggaatgctagcaacactcttttttgagcattctctctaacacttacttttttattggatgaaatccatgta 37398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 363
Target Start/End: Complemental strand, 42579810 - 42579651
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaa 303  Q
    |||||||| | |||| |||||||||||||||||||||||| ||| ||  | ||||||  |||||||  |||||||||  |||  || || | ||||||||    
T  42579810 actctctcaaacactcactcttttattggatgaaatcaatatatatctcatcactttacgtgggtttcattttcaaaacgtataactcatattgatttaa 42579711  T
Q  304 accactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
      || | ||||||||||| ||||| |||||||| | |||| ||||||||| ||| |||||    
T  42579710 gtcaattagagagtgagttttagaaagagtgtttaaaagaaagtgttgctggcactactc 42579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 26510363 - 26510257
Alignment:
Q  35 gtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggacctatcgattttgag 134  Q
    ||||||||| || |||||||| ||||| |||||| ||||||||||||| || ||  | || |||||||| | ||||||||| || | ||| |||||||||    
T  26510363 gtttagtccgatgtgtgaagttcatataggagaaactcttggtttattatctgctctagaatgggttcacgagcttaatcttggtcttatggattttgag 26510264  T
Q  135 ctggatg 141  Q
     ||||||    
T  26510263 atggatg 26510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 287
Target Start/End: Original strand, 8009521 - 8009622
Alignment:
Q  186 gcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    ||||||||| ||||| || ||||| |||| |||| ||| |||| ||||||||||||||  ||||||  |||||||| ||||| ||| ||||| | |||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccactttatgtggtttccatttttagagtgt 8009620  T
Q  286 ag 287  Q
    ||    
T  8009621 ag 8009622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 10943998 - 10944063
Alignment:
Q  11 ttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttgg 76  Q
    |||| |||||| ||||||||| | ||||||||  || |||||||| ||||||||||||||||||||    
T  10943998 ttttgtccttgccaaaactgattggtttagtctcatatgtgaagttcatattggagaagctcttgg 10944063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 10949867 - 10949932
Alignment:
Q  11 ttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttgg 76  Q
    |||| |||||| ||||||||| | ||||||||  || |||||||| ||||||||||||||||||||    
T  10949867 ttttgtccttgccaaaactgattggtttagtctcatatgtgaagttcatattggagaagctcttgg 10949932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 26370228 - 26370300
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttgg 76  Q
    |||||| ||||| |||||| ||||||||| | ||||||| | || |||||||| ||||||||||||||||||||    
T  26370228 catggtccttttgtccttgccaaaactgattggtttagttccatatgtgaagt-catattggagaagctcttgg 26370300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 364
Target Start/End: Original strand, 6315705 - 6315845
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtat 323  Q
    ||||| |||||||||||||||||||| | |||||||| | | ||||| |||| ||||||||| | || ||| | ||||   ||| | | ||||||| |||    
T  6315705 ttttactggatgaaatcaatgtatgttccaccactttatataggttccatttccaaagtgtaggtcctacattaattttttccaataaaagagtgaatat 6315804  T
Q  324 tagagagagtgttcataagagagtgttgctagcattactct 364  Q
    || | |||||| ||| |||||||||||| ||||||| ||||    
T  6315805 taaaaagagtgctcaaaagagagtgttgttagcattcctct 6315845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 11775939 - 11775866
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgt 250  Q
    ||||||||||||||||||||  ||||  | |||||||||| |||||| | ||||||||||| ||||||||| ||||    
T  11775939 gaggaatgctagcaacactc--ttttatacactctctctaacacttattgttttattggataaaatcaatgaatgt 11775866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 29795802 - 29795890
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgt 263  Q
    |||||||| |||||||||| ||||||| | ||| ||| || |||| | |||||||| | |||||||||||||||||   ||||||||||    
T  29795802 gaggaatgatagcaacacttacttttctacactttctttatcactcattcttttatcgaatgaaatcaatgtatgtatcaccactttgt 29795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 37228685 - 37228613
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||| |||| |||||||| ||||| |  ||||| ||||||||| ||| ||||||||| |||||||||||||    
T  37228685 gaggaaggctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgta 37228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 44274419 - 44274352
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatca 242  Q
    ||||||||||| |||||||| ||||| |||| |||||||| |||| ||||| ||||||| | ||||||    
T  44274419 gaggaatgctaacaacactctcttttaaatattctctctaacactcactctgttattggtttaaatca 44274352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 6420526 - 6420456
Alignment:
Q  286 agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    |||||||| ||||||||| ||| | ||| |||||||  | ||||||||||| | |||||||||||||||||    
T  6420526 agacccaccatgatttaagccaataagaaagtgagtggtggagagagtgttgaaaagagagtgttgctagc 6420456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 15508961 - 15508915
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| ||||    
T  15508961 agagtgagtgttagaaagagtgttcaaaagagagtgttgctaacatt 15508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 37228545 - 37228499
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  37228545 agagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 37228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 42182936 - 42182890
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  42182936 agagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 42182890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 286
Target Start/End: Original strand, 4877280 - 4877390
Alignment:
Q  175 gaggaatgctagcaa-cactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    ||||||||||| ||| ||||||||||| |||  ||| ||||||||| ||||||||||| |||| |||  ||| |||||  | ||||||||||| |||| |    
T  4877280 gaggaatgctatcaaacactcacttttaaat--tctttctagcactcactcttttatttgatggaattcatgcatgtctcatcactttgtgtgagttcta 4877377  T
Q  274 ttttcaaagtgta 286  Q
    |||  ||||||||    
T  4877378 tttctaaagtgta 4877390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19193497 - 19193534
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctc 212  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  19193497 gaggaatgctagcaacactctcttttcaacactctctc 19193534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 23464009 - 23463936
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat 248  Q
    ||||||||||||||||| || ||||| ||||||||||| | || | ||| | ||||||  ||||||||||||||    
T  23464009 gaggaatgctagcaacattctctttttaatactctctcaaacattcactatcttattgagtgaaatcaatgtat 23463936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 30706407 - 30706456
Alignment:
Q  315 agtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| || ||||||||||| | |||||||||||||||||| ||||||    
T  30706407 agtgagtgtttgagagagtgttgaaaagagagtgttgctagcactactct 30706456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 43680016 - 43680132
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||| | || |||||||| ||||  |||||||||||||||||||| |  ||  | || |||||||| | ||||||||| || ||||    
T  43680016 aaaactgaatggtttagttcgatttgtgaagttcataa-ggagaagctcttggtttattatatgctctagaatgggttcacgagcttaatcttggtccta 43680114  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  43680115 tggattttgagatggatg 43680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 14715627 - 14715691
Alignment:
Q  182 gctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgt 246  Q
    ||||||||||||  ||||| |||| ||||||||||| | ||||| | |||||||||||| |||||    
T  14715627 gctagcaacactttctttttaatattctctctagcattcactctctcattggatgaaattaatgt 14715691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 21215458 - 21215394
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    |||||||||||||   ||||||||||  ||||||| ||||| |||||| || |||||||||||||    
T  21215458 actcttttattggccaaaatcaatgtgagtcctacaactttatgtgggatccattttcaaagtgt 21215394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 104)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 8108957 - 8109141
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| || | |||||||  |||||||||||    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttc 8109056  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8109057 aaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcattactc 8109141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 43771126 - 43771312
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| ||||||||||||||||| || ||||||||||  ||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaatttt 43771225  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||    
T  43771226 caaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttgctagcattactct 43771312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 39471154 - 39471342
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| |||||||||| || |||  ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  39471154 gaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaat 39471253  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
     |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| | |||||||||||| |||||||||||    
T  39471254 cttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagaatgtttaaaagagagtgttgttagcattactc 39471342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 175 - 363
Target Start/End: Complemental strand, 34129583 - 34129395
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||| ||| ||||||||||||| |||||||    
T  34129583 gaggaatggtagcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaat 34129484  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||| ||| ||||||| ||||||||| | | |||||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  34129483 tttcaaagtgtggactcacaatggtttaaaccaataaaagagtgagtattagagattgtgttcagaagagagtgttgccagcattactc 34129395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 50164392 - 50164580
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||| |||| |||||||||| |||||||||||| ||| |||| |||||| |||||||||    
T  50164392 gaggaatactagtaacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaat 50164491  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||| ||||||||||||||||| | ||| |||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  50164492 tttcaaagtgtagactcacaatgatttaaaccaataagaaagtgagcattagagagagtgttcaaaagatagtgttactagcattactc 50164580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 179 - 359
Target Start/End: Original strand, 24834579 - 24834759
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||||||||||  | |||||||||| | || ||  |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  24834579 aatgctagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttc 24834678  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||||||||||| |||||||||| | ||||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  24834679 aaagtgtagacccacaataatttaaaccaataagagagtgactattagagagagagtttaaaagagagtgttgctagcatt 24834759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 189 - 351
Target Start/End: Original strand, 722168 - 722330
Alignment:
Q  189 acactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga 288  Q
    |||||||  |||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||  |||||||||| ||||||||||    
T  722168 acactcatctttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 722267  T
Q  289 cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| |||| |||||||    
T  722268 cccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 26361483 - 26361302
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| |||||  |        |||||||||||||||||| |||||||||| || |||| ||||||||||||||||    
T  26361483 gaggaatgctagcaacactcacttttcaacactctaac--------actcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaat 26361392  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||||||||||||||||| |||||||||||||| | || ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26361391 attcaaagtgtagacccataatgatttaaaccaataagtgagtgagtattagagagggtgttcaaaagagagtgttgctagcattactct 26361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 183 - 356
Target Start/End: Original strand, 20454545 - 20454716
Alignment:
Q  183 ctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaag 282  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||   |||||||||| ||||||||||||||||    
T  20454545 ctagcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcca--cactttgtgttggttcaattttcaaag 20454642  T
Q  283 tgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    |||||| ||||||||||||||| || | | ||||||||| |||||||||||||||| |||||| ||||||||||    
T  20454643 tgtagatccacaatgatttaaatcaataacagagtgagtgttagagagagtgttcaaaagagaatgttgctagc 20454716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 189 - 352
Target Start/End: Complemental strand, 754749 - 754586
Alignment:
Q  189 acactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga 288  Q
    ||||| ||||||||| ||| |||||| |||| ||| |||||||||||||| |||| |||||||| ||||||||||||  |||||||||| ||||||||||    
T  754749 acacttacttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 754650  T
Q  289 cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgc 352  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||||||||    
T  754649 cccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 754586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 176 - 363
Target Start/End: Original strand, 47009187 - 47009374
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    ||||||| || ||| ||||| ||||||| ||||| ||||||||| ||||||||||||||| |||| ||||| ||||  ||| ||||||||| ||||||||    
T  47009187 aggaatgttaacaaaactcatttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaatt 47009286  T
Q  276 ttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||||||  ||||||||||||||||| | ||| |||||||||||||||| ||||||| |||||| |||||||||| ||||||    
T  47009287 ttcaaagtgtagatacacaatgatttaaaccaataagaaagtgagtattagagagggtgttcaaaagagaatgttgctagcgttactc 47009374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 49077246 - 49077434
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||| ||||||| | ||||| ||||||| | ||||||||| ||| |||| ||| ||||||| |||||||||||||||||||||    
T  49077246 gaggaatgctagcaacactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaat 49077345  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||| ||||||||||||||||||||||||||||| | ||||  |||||| |  |||  ||||| | ||||||||||| ||||||||||||    
T  49077346 ttttaaagtgtagacccacaatgatttaaaccaataagagtttgagtactcaagaaggtgtttaaaagagagtgttactagcattactc 49077434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 49242167 - 49242355
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||| || ||| ||||||||||||| || ||||| |||| || | ||| ||| |||||||||||||||| ||||||| | |||||||||||||||||||    
T  49242167 gaggagtgttaggaacactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaat 49242266  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||| |||||||  ||||||||||||||||| | ||||| ||||||| | |||||||||| | |||||||||||| |||||||||||    
T  49242267 tttcaatgtgtagattcacaatgatttaaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttgttagcattactc 49242355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 175 - 354
Target Start/End: Complemental strand, 40991772 - 40991593
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||| ||||||| ||| | |||| | ||  | ||    
T  40991772 gaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcactat 40991673  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    ||   |||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||| || | ||||||||||    
T  40991672 ttctgaagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaaaaaagtgttgcta 40991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 33653672 - 33653511
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||| ||||||| ||||||||||  | | |||| |||||| |||||||||||||||||||| |||| |||||| || ||||||    
T  33653672 gaggaatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaat 33653573  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||| | | || |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  33653572 tttcaaaatattgatccacaatgatttaaaccaataagaaagtgagtattagagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 364
Target Start/End: Complemental strand, 24938557 - 24938409
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagaga 315  Q
    |||| |||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||| |||||||||||| |||||||||||||||| | |||||    
T  24938557 cactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagaga 24938458  T
Q  316 gtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    || ||||||||||| |||||| | |||| | ||||||||||||||||||    
T  24938457 gtaagtattagagaaagtgttgaaaagataatgttgctagcattactct 24938409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 50571861 - 50571985
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || | || ||| ||||| ||||||    
T  50571861 gaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaat 50571960  T
Q  275 tttcaaagtgtagacccacaatgat 299  Q
    ||||||||||||||||| |||||||    
T  50571961 tttcaaagtgtagacccgcaatgat 50571985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 220 - 359
Target Start/End: Original strand, 22542423 - 22542562
Alignment:
Q  220 tactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtga 319  Q
    ||||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||||||  ||| ||||||||||||||||| | | |||||||||    
T  22542423 tactcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtga 22542522  T
Q  320 gtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||| | |||||||||| |||| ||||||| |||||||    
T  22542523 gtattaaaaagagtgttcaaaagatagtgttgttagcatt 22542562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 175 - 316
Target Start/End: Complemental strand, 20225522 - 20225383
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || |||||||  |||||| |||||||||||||||| |||| ||| |||||| |||||||| ||||||||| ||    
T  20225522 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctat 20225425  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagag 316  Q
    || |||||||||||| ||||||||||||||||| | ||||||    
T  20225424 ttccaaagtgtagactcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 307
Target Start/End: Original strand, 46287441 - 46287570
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||| |||||||||||||||||| | | ||||||||||||| |||||||||||||||| ||| |||||| ||| ||||||||||  |||||||||    
T  46287441 gaatgctagtaacactcacttttcaatattttttctagcacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaatttt 46287540  T
Q  278 caaagtgtagacccacaatgatttaaacca 307  Q
    |||||||| ||| |||||||||||||||||    
T  46287541 caaagtgttgactcacaatgatttaaacca 46287570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 364
Target Start/End: Original strand, 19447174 - 19447318
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag-acccacaatgatttaaaccactgagagagtga 319  Q
    ||||| ||||||| ||||| |||||||||||| |||||||| ||||||||| ||||||||| || || ||| ||||||||||||  || | |||||||||    
T  19447174 actctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtga 19447273  T
Q  320 gtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||    
T  19447274 gtattaaagagagtgttcaaaagagagtgttgctagcactactct 19447318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 45311078 - 45310943
Alignment:
Q  228 tattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattaga 327  Q
    ||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||| ||||  ||||||||||||| || | ||||||| |||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattaga 45310979  T
Q  328 gagagtgttcataagagagtgttgctagcattactc 363  Q
    |||   ||||| |||||| |||||||||||||||||    
T  45310978 gagtcagttcaaaagagaatgttgctagcattactc 45310943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 358
Target Start/End: Complemental strand, 48339515 - 48339340
Alignment:
Q  183 ctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaag 282  Q
    ||||||||||||||| || |  ||||||| || |||| ||||| ||||||||  |||||||||||||| | |||||||||||||||||||||||||||||    
T  48339515 ctagcaacactcactattgagcactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaag 48339416  T
Q  283 tgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
     ||||||||| |||| ||||||||| | | ||||||  | ||||||| |||| ||| ||  |||||||||||||||    
T  48339415 cgtagacccataatgctttaaaccaataaaagagtggatgttagagaaagtgctcaaaaacgagtgttgctagcat 48339340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 357
Target Start/End: Original strand, 13069938 - 13070120
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||| || |||| ||||| |  || |||||||||||| ||||||||||||| |||||||||||||||| | |||||||| ||||||||| ||    
T  13069938 gaggaatgctaggaatactctcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccat 13070036  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||||||||||| | || ||| |||||| |  || | | ||||||||| ||||||| | |||||| ||||||||||||||||||    
T  13070037 tttcaaagtgtaggtcctacattgattttactcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagca 13070120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 25719266 - 25719123
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaa 303  Q
    |||||||| | |||| ||||| ||||||| |||||||||||||||||| |||||||| ||||||||  |||| |||| |||| |||||||||||||||||    
T  25719266 actctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaa 25719167  T
Q  304 accactgagagagtgagtattagagagagtgttcataagagagt 347  Q
     ||| | ||||||||||||||||||| | |||||| ||||||||    
T  25719166 cccaatcagagagtgagtattagagaaattgttcaaaagagagt 25719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 335
Target Start/End: Original strand, 29699499 - 29699645
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    ||||| ||||||| ||||| || ||||||||| ||||||||||||||||||||||||  |||||| |||||||||||| ||||| | ||||||||| |||    
T  29699499 aacacccacttttgaataccctttctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttcta-tttcaaagtatag 29699597  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagagagagtgt 335  Q
     || ||||||||||||| || | ||||||||| ||||||| |||||||    
T  29699598 cccgacaatgatttaaaacaataagagagtgaatattagatagagtgt 29699645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 364
Target Start/End: Original strand, 39016664 - 39016850
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||| || ||||| || ||||||| || |||||||| |||||||||||||||||||||||||||| |||| |||  |||||||| |||| |    
T  39016664 aatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttcc 39016763  T
Q  279 aaagtgtag-acccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||| | | ||| |||||| | | | | | ||||| |||  ||||||||||||||| ||||||||||||||| |||| ||||    
T  39016764 aaagtgtagtatctacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatttctct 39016850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 179 - 355
Target Start/End: Complemental strand, 10169822 - 10169648
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||| ||||| ||||||||||| |||||||  |  | | ||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  10169822 aatgctaacaacattcacttttcaacactctct--aatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttc 10169725  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    |||   |||| ||||||| |||||||||| | ||||||||| ||||| | ||  |||| | || |||||||||||||    
T  10169724 aaaacatagatccacaattatttaaaccaataagagagtgaatattaaaaaggatgttaaaaaaagagtgttgctag 10169648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 226 - 363
Target Start/End: Complemental strand, 31251015 - 31250877
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagta-tt 324  Q
    ||||||||||||||||||||||||||| |||| ||| ||   |||||||||||||| |||||||||||||||||||||| || | | ||||| | || ||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaatattt 31250916  T
Q  325 agagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||| || | || |||||||||||||||||||||    
T  31250915 agagagagtatttaaaatagagtgttgctagcattactc 31250877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 42862604 - 42862414
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||  ||||||| ||||| |  ||| ||||||||||| ||| ||||||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  42862604 gaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42862505  T
Q  275 tttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| | ||  | | |||||| | ||| | | |||||||||  |||| | |||| ||| |||||||||||||||||||| ||||    
T  42862504 tttcaaagtgtgaaacataaattgatttcacccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctct 42862414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 364
Target Start/End: Complemental strand, 38537654 - 38537507
Alignment:
Q  220 tactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaa---agtgtagacccacaatgatttaaaccactgagagag 316  Q
    |||| ||||||| ||||||||||||||||||| ||| ||||||| || |||||||||||||   ||||||||  || ||||||||||| || | | |||     
T  38537654 tactattttatttgatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataaaagaa 38537555  T
Q  317 tgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| |||||||||||||||||| |||| |||||||||| |||||||||    
T  38537554 tgattattagagagagtgttcaaaagaaagtgttgctaacattactct 38537507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 50481708 - 50481584
Alignment:
Q  195 acttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccaca 294  Q
    ||||||||| ||||| | |  |||| ||||||||||||||||||||||| |||||||  |||||||||| ||| ||| ||||||||||||||||| ||||    
T  50481708 acttttcaacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacaca 50481609  T
Q  295 atgatttaaaccactgagagagtga 319  Q
    || |||||||||| | |||||||||    
T  50481608 atcatttaaaccaataagagagtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 46242113 - 46242000
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    |||||||||||||| || |||||||  || ||| || ||||||| ||||||||||| ||||||||| |||| ||||||| ||||||||||||||| | ||    
T  46242113 caacactcactttttaacactctct--agaactcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatata 46242016  T
Q  287 gacccacaatgattta 302  Q
    ||||||||||||||||    
T  46242015 gacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 13519944 - 13520078
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaa--tcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||||| | ||||| |||| |||||||||| ||||||| ||| ||| ||||||| |||  ||||||||||| | ||||||||||| ||||||     
T  13519944 gaggaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggttct 13520043  T
Q  273 attttcaaagtgtagacccacaatgatttaaacca 307  Q
     ||| ||| ||||| ||||||||||||||||||||    
T  13520044 gtttccaatgtgtatacccacaatgatttaaacca 13520078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 359
Target Start/End: Complemental strand, 30867081 - 30866930
Alignment:
Q  209 tctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga-cccacaatgatttaaacca 307  Q
    ||||||||||| ||| ||||||||||| |||| ||||||||||| |||||||| ||||||||| |||||||||||||||| |||||| || ||| | | |    
T  30867081 tctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttcaccta 30866982  T
Q  308 ctgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
     | | | | |||||  ||||||||||||| | ||||||| ||||||||||||    
T  30866981 ataaaaaaatgagtgctagagagagtgtttaaaagagagcgttgctagcatt 30866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 287
Target Start/End: Complemental strand, 47237923 - 47237812
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    |||||||||| |||||||| ||||| || ||||||||||||| | |||||||||||||||||||||||| ||||||| |||||||| | |  |||  |||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  276 ttcaaagtgtag 287  Q
    ||||||||||||    
T  47237823 ttcaaagtgtag 47237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 354
Target Start/End: Complemental strand, 21776998 - 21776848
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaa 303  Q
    |||||||||| || | ||||||||||||||| ||||||||||||||||||||||||| ||||| ||  |||| |||| |||| |||||| |  |||||||    
T  21776998 actctctctaacattcactcttttattggataaaatcaatgtatgtcctaccactttatgtggattttatttccaaaatgtatgacccatatcgatttaa 21776899  T
Q  304 accactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
      |  ||||||| ||||| |||||||||||||  | |||||||||||||||    
T  21776898 ttcgatgagagaatgagtgttagagagagtgtcaaaaagagagtgttgcta 21776848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 363
Target Start/End: Complemental strand, 43124651 - 43124509
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    |||| |||| |||||||||||||||||||||| |||| ||||||| || |  ||||||||| |||| |||||  | ||||||||||| | |||||||| |    
T  43124651 actcatttaatggatgaaatcaatgtatgtcccaccattttgtgtaggctttattttcaaactgtatacccatgaagatttaaaccaataagagagtgcg 43124552  T
Q  321 tattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||| | |||||||||| | || ||||||| |||||||||||    
T  43124551 tattataaagagtgttcaaaggaaagtgttgttagcattactc 43124509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 357
Target Start/End: Complemental strand, 45081925 - 45081743
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| |||||||| || ||||| || | ||| | ||||||||| ||||||||| |||| |||  ||| |||| |||||| ||||||||||| | ||    
T  45081925 gaggaatgttagcaacattctcttttgaacattctttttagcacttattcttttatttgatggaatacatgcatgttctaccattttgtgtgggtcctat 45081826  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    || ||||||||| || |||||| |||||||||| | | ||||||||||||||| ||| | |||| ||  |||||||| |||||    
T  45081825 ttccaaagtgtacactcacaataatttaaaccaataaaagagtgagtattagaaagaattttcaaaaaggagtgttgatagca 45081743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 307
Target Start/End: Complemental strand, 33996106 - 33995986
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    |||||||| |||||||| || ||||||| || | |||||||||||  || |||||||||||||||  |||||||| ||||||||||||||||||| | ||    
T  33996106 caacactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaattta 33996007  T
Q  287 gacccacaatgatttaaacca 307  Q
     || ||||||| |||||||||    
T  33996006 aactcacaatggtttaaacca 33995986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 354
Target Start/End: Original strand, 52671862 - 52672006
Alignment:
Q  210 ctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccact 309  Q
    |||||| ||| ||| |||||||||||||||| ||||||||||| |||| ||| |||  |||||||||| |||||||| |  | ||||||||||||| | |    
T  52671862 ctctagtactcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaat 52671961  T
Q  310 gagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
     ||| ||||||||||| |||||||||| | |||| | ||||||||    
T  52671962 aagatagtgagtattaaagagagtgtttaaaagataatgttgcta 52672006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 357
Target Start/End: Original strand, 43958145 - 43958327
Alignment:
Q  172 aacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttc 271  Q
    |||||| |||| |||||||||||| |||| || | ||||||||||| | |||||||||||| ||  ||||||||||||||| |||| ||| ||||| | |    
T  43958145 aacgagaaatgttagcaacactcagtttttaacattctctctagcattcactcttttattgaatagaatcaatgtatgtcccaccattttatgtggat-c 43958243  T
Q  272 aattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
     ||||||||  || |||  || | |||||||||||| | ||||||| ||||  |||||||||||||| |||||||| ||| |||||    
T  43958244 tattttcaatatgcagaatcaaagtgatttaaaccaataagagagtaagta--agagagagtgttcaaaagagagtattgttagca 43958327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 359
Target Start/End: Complemental strand, 2187992 - 2187812
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||| ||| ||||||| ||||| |  ||||||||||||  |  |||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||    
T  2187992 aatgttaggaacactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggttc-attttc 2187894  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||| | |||||| || ||| |  || | | | | ||||| |||||||||||| ||| ||| ||||||||||||||||    
T  2187893 aaagtgtaggtcccacattgttttcacacaataaaaaaatgagtgttagagagagtgctcaaaagcgagtgttgctagcatt 2187812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 5044673 - 5044568
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    |||||||||||||||||||| ||||||  || | |||||||| |||||||||| ||| ||||||||||||| ||||||||||| | | ||| ||| ||||    
T  5044673 ttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatgaatatt 5044574  T
Q  325 agagag 330  Q
    ||||||    
T  5044573 agagag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 354
Target Start/End: Original strand, 5545642 - 5545755
Alignment:
Q  242 aatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcata 340  Q
    ||||||||||| |||||||| |||||| || ||||||||| |||| |||||||| |||||||| | | | | | ||| |||||||||||||||||||| |    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaa 5545741  T
Q  341 agagagtgttgcta 354  Q
    ||||||||||||||    
T  5545742 agagagtgttgcta 5545755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 22592301 - 22592402
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||| || ||||||| ||||||||| || | ||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||||||||| ||||| ||    
T  22592301 gaggattgatagcaacgctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctat 22592400  T
Q  275 tt 276  Q
    ||    
T  22592401 tt 22592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 37451161 - 37451023
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    ||||||| |||| |||||||||||||||  |||| |||||  || ||||| |||||| |  ||| ||||||||||||||||| | |||||||||||||||    
T  37451161 ctctctaacactcactcttttattggatagaatccatgtacatcttaccaatttgtgag--ttctattttcaaagtgtagactcgcaatgatttaaacca 37451064  T
Q  308 ctgagagagtgagtattagagagagtgttcataagagagtg 348  Q
     | | |||||||||||||||||  ||||| | |||||||||    
T  37451063 ataaaagagtgagtattagagaaggtgtttaaaagagagtg 37451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 41153354 - 41153249
Alignment:
Q  202 aatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgattt 301  Q
    |||||||||| || |||||||||||||||||||||||||  ||| |||||| |||||||||||| ||||| ||||  |||||||| |  |||||||||||    
T  41153354 aatactctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgattt 41153255  T
Q  302 aaacca 307  Q
    | ||||    
T  41153254 agacca 41153249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 2088839 - 2088735
Alignment:
Q  184 tagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagt 283  Q
    |||||||||||  |||| | ||||||||||| |||| ||||||| ||||  |||||||||||||||||| |||||||| ||||| ||| |||| ||||||    
T  2088839 tagcaacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagt 2088740  T
Q  284 gtaga 288  Q
    |||||    
T  2088739 gtaga 2088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 11895134 - 11895222
Alignment:
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattag-agagagtgttcataagagagtgttgctagcattact 362  Q
    ||||||||||||||||||||||||||| ||| | | |||||||||||| ||| | | |||||||| |||||||||||||||||||||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttgctagcattact 11895222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 350
Target Start/End: Complemental strand, 19937341 - 19937180
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactctttta-ttggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    ||||||||||||| |||  ||||||||||| ||| | ||||| ||||||  ||||||||||||||| |||| | | |||| |||| ||||||||||| ||    
T  19937341 aacactcacttttaaat--tctctctagcatttaattttttaattggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtata 19937244  T
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgtt 350  Q
    || | ||||||||| ||||||   | |||||||| |||| |||||||||| | |||||||||||    
T  19937243 gatcgacaatgattcaaaccaacaaaagagtgagaattaaagagagtgtttaaaagagagtgtt 19937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 17778191 - 17778040
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttc 102  Q
    |||||| ||||| |||||| ||||||||| | ||||||||| || |||||||| |||||||||||||||||||| ||  |||||||  | || ||||| |    
T  17778191 catggtacttttgtccttgccaaaactgattggtttagtcccatatgtgaagttcatattggagaagctcttgggttgatttcagcactagagtgggtgc 17778092  T
Q  103 atgggcttaatctaggacctatcgattttgagctggatgtaaagagagtggt 154  Q
    ||| ||| ||  | |||||||| || |||||| ||||||  |||||||||||    
T  17778091 atgagctcaacttgggacctattgactttgagatggatgcgaagagagtggt 17778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 16178611 - 16178692
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    ||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||    
T  16178611 actctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 16178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 355
Target Start/End: Original strand, 51206079 - 51206221
Alignment:
Q  214 agcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgag 312  Q
    |||||| |||| |||||| |||||||||||||||||||| | |||||| |||| |||  ||||||||| |||| | || ||| |||||| | ||| | |     
T  51206079 agcactcactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaa 51206178  T
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||    
T  51206179 agagtgagtgctagagagagtgctcaaaagagagtgttgctag 51206221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 49682974 - 49682842
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||||||||||   | ||||| ||| ||| ||||| | ||| |||||| ||||||||||||||||| ||  |||||||| | ||  ||||||    
T  49682974 gaggaatgttagcaacacttgttattcaacactttctttagcattcacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaat 49682875  T
Q  275 tttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||||| |||||  |||||||||||    
T  49682874 tttcaaagtgtagagccacatcgatttaaacca 49682842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 52279373 - 52279253
Alignment:
Q  244 tgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataaga 343  Q
    ||||||| | || ||||| | ||| ||||||||||||||| |||||||||||||||||| | || |  |||||||| ||||||| |||||||| | || |    
T  52279373 tgtatgttccacaactttttctggattcaattttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtttaaaaaa 52279274  T
Q  344 gagtgttgctagcattactct 364  Q
    || |||||||| |||||||||    
T  52279273 gaatgttgctaccattactct 52279253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 364
Target Start/End: Original strand, 35179653 - 35179796
Alignment:
Q  222 ctcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagt---gtagacccacaatgatttaaaccactgagagagtg 318  Q
    ||||||||| |||||||||||||||||||   || |||||  |||||||||| |||||||||   ||||||| ||||||||||| || | | | ||||||    
T  35179653 ctcttttatcggatgaaatcaatgtatgtttcactactttacgtgggttcaa-tttcaaagtgtagtagacctacaatgatttatactaataatagagtg 35179751  T
Q  319 agtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    | ||||| ||| |||| ||| |||||||||||| ||||||||||||    
T  35179752 aatattaaagatagtg-tcaaaagagagtgttgttagcattactct 35179796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 51206228 - 51206157
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||| |||||||||||| ||||| |  ||||||||||||||| ||||||||||||| |||||||||||||    
T  51206228 aggaatactagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 362
Target Start/End: Complemental strand, 51904778 - 51904611
Alignment:
Q  196 cttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-agacccaca 294  Q
    |||||||| ||||||| |  |||| | ||| ||||| ||||||||||||||||| || | ||||||  ||||   | |||| |||||||| ||||||||     
T  51904778 cttttcaacactctctttgtcactcattctcttattagatgaaatcaatgtatgacccatcactttaagtggaacctatttacaaagtgtgagacccacc 51904679  T
Q  295 atgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    ||||||||| ||| | |||  || ||| |||||||||||||| | |||||||||||||||||| ||||    
T  51904678 atgatttaagccaataagaatgtaagtgttagagagagtgttgaaaagagagtgttgctagcaatact 51904611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 38636375 - 38636461
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgattta 302  Q
    |||| ||||||||||| ||| |||||||||||||||  || ||||| |||||||  |||||| |||||||||| |||||||||||||    
T  38636375 cactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgattta 38636461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 305
Target Start/End: Complemental strand, 49769987 - 49769857
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||| | |||||| || | ||| | || ||| ||||||||||||||||||||||||  ||| ||| || | ||| |||| |||  ||    
T  49769987 gaggaatgctagcaacagttacttttgaacattctttttaacacatactcttttattggatgaaatcaaaatatatcccactattttatgtgagttttat 49769888  T
Q  275 tttcaaagtgtagacccacaatgatttaaac 305  Q
    ||||||||| || ||| ||||||||||||||    
T  49769887 tttcaaagtataaacctacaatgatttaaac 49769857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 40812034 - 40812103
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaat 244  Q
    |||| |||||||||||||||  |||| || ||||||||||||||| ||||||||||||| ||||||||||    
T  40812034 gaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 46536384 - 46536295
Alignment:
Q  236 gaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatta 325  Q
    ||||||||| |||||| |||||||||||||  ||||||||||||||||||| ||||||| |  |||||| || | ||||||||| |||||    
T  46536384 gaaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtgaatatta 46536295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 50652470 - 50652369
Alignment:
Q  224 cttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtat 323  Q
    ||||||||| || |||||||||||| ||  |||||||||||| ||||||||||||||| |||||||  ||||| ||||||| || | ||| ||||| |||    
T  50652470 cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtgaatat 50652371  T
Q  324 ta 325  Q
    ||    
T  50652370 ta 50652369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 53708467 - 53708350
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| ||||| |||||||||||||||||||| || ||  |  | |||||||| | ||||||||| || ||||    
T  53708467 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttggtttattatctgctctacaatgggttcacgagcttaatcttggtccta 53708368  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  53708367 tggattttgagatggatg 53708350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 362
Target Start/End: Original strand, 27654478 - 27654662
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||  |||||| |||||||| |||||||||| |||| | ||| ||||||||| |||  ||||||||||| ||||||||  ||||   | |||| |    
T  27654478 aatgctagggacactctcttttcaacactctctctaacactcattctcttattggataaaactaatgtatgtcccaccactttaagtggaacccatttcc 27654577  T
Q  279 aaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    || |||| | | ||||  |||||||||||| | | | | ||||| || ||||||||||| | |||||||||||||||||| ||||    
T  27654578 aacgtgtgaaatccaccttgatttaaaccaataataaattgagtgtttgagagagtgttgaaaagagagtgttgctagcactact 27654662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 39016845 - 39016777
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| ||||||||||| ||||| || ||||||||||||||||||||||||||| | | |||||||||||    
T  39016845 aatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgta 39016777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 41278755 - 41278695
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    ||||||||||||| | |||| |||||||||||||||||||| ||||||||| |||||||||    
T  41278755 actcttttattgggtaaaattaatgtatgtcctaccactttatgtgggttccattttcaaa 41278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 363
Target Start/End: Complemental strand, 18421962 - 18421826
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||| |||||||||||||||||||| |||||  |||||| ||| |||||| ||||| |  |   |||||||||||||||| | | | ||||| ||||    
T  18421962 ttttattagatgaaatcaatgtatgtcccaccac--tgtgtgtgtttaatttttaaagtatgtatttacaatgatttaaaccaataaaaaagtgaatatt 18421865  T
Q  325 agagagagtgttcataagagagtgttgctagcattactc 363  Q
    | | | ||| |||| ||||||||||||||| ||||||||    
T  18421864 aaataaagtattcaaaagagagtgttgctaacattactc 18421826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 359
Target Start/End: Original strand, 37315564 - 37315742
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||||||| ||||| |  |||||||||| |||| ||||||   |||| |||||||||||||||||| |||||||| |||  |||  ||||||    
T  37315564 aatgctagcaacactctcttttgagcactctctctaacactcactctt---ttgggtgaaatcaatgtatgtcccaccactttatgtaagtttcattttc 37315660  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||| ||| |  | ||| |||||| | ||| | | |||||||||  ||  ||||||| ||| || |||||||||||||||||    
T  37315661 aaagcgtaggttctacattgatttcacccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcatt 37315742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 42862415 - 42862490
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgt 250  Q
    |||||||||||||||||||| ||||| |  ||| | ||||||||| ||||||||||||| |||||||||| |||||    
T  42862415 gaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgt 42862490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 44832460 - 44832650
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| ||||| || ||||| |  | ||| |||| |||| ||| ||||||||| |||||| ||||||||||| |||| ||| ||||| ||| ||    
T  44832460 gaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattccat 44832559  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    || ||||||| | | || ||| |||||| | ||| | | | | |||||  | ||||||||| ||| |||||||||||||||||||| ||||    
T  44832560 ttccaaagtgcaggtcctacattgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcctct 44832650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 48608077 - 48608163
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    ||||||||||| |||||||| ||||| | |||| ||| || || | ||||||||||||||| |||| ||||||||||| ||||||||    
T  48608077 gaggaatgctaacaacactctcttttaagtactttctttaacattcactcttttattggataaaattaatgtatgtcccaccacttt 48608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 11127796 - 11127859
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttc-aattttcaaagtg 284  Q
    |||||||||| ||||||||||||||||||||| |||||||||| | ||||| |||||||||||||    
T  11127796 actcttttatgggatgaaatcaatgtatgtcc-accactttgtattggttctaattttcaaagtg 11127859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 44832649 - 44832577
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  |||||||| |||||| | | ||||||||| |||||||||||||    
T  44832649 gaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgta 44832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 1559891 - 1559812
Alignment:
Q  184 tagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgt 263  Q
    |||||||||||||||||  | ||||||| ||||||| |||| ||||||| ||| |||||| |||||||| |||| |||||    
T  1559891 tagcaacactcacttttgtacactctctttagcactcactcctttattgaatggaatcaacgtatgtcccaccaatttgt 1559812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 4138913 - 4138991
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||||||||||||||||||||||| ||||  || | ||| ||| |||| |||||||||||| | |||| |||||||    
T  4138913 tttattggatgaaatcaatgtatgtcccaccatattttatggattctatttccaaagtgtagactcgcaataatttaaa 4138991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 37315610 - 37315564
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  37315610 agagtgagtgttagagagagtgctcaaaagagagtgttgctagcatt 37315564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 32663459 - 32663532
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttgg 76  Q
    |||||| ||||| |||||  ||||||||| | ||||||||| || |||||||| ||||||||||||||| ||||    
T  32663459 catggtacttttgtccttaccaaaactgattggtttagtcccatatgtgaagttcatattggagaagcttttgg 32663532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 37315743 - 37315674
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||  |||| |  ||||||  ||||||| ||||||||||||| |||||||||||||    
T  37315743 gaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgta 37315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 2860924 - 2861024
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    |||| ||||||||||| ||||||| | | | | |||| ||||| |||||||||||||||||||| |||||||  ||||| ||| | |  |||||||||||    
T  2860924 ttttgttggatgaaattaatgtattttccatccctttctgtggattcaattttcaaagtgtagatccacaatagtttaagccaatcaccgagtgagtatt 2861023  T
Q  325 a 325  Q
    |    
T  2861024 a 2861024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 359
Target Start/End: Original strand, 34961699 - 34961828
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||||||||| |||||||||| |   |||||||||| |||||||||||||||||   ||||  |||||| |||||||| | | | ||||||||||||    
T  34961699 ttttattggatgagatcaatgtatatttcaccactttgt-tgggttcaattttcaaa--atagagtcacaataatttaaactaataaaagagtgagtatt 34961795  T
Q  325 agagagagtgttcataagagagtgttgctagcatt 359  Q
      | |||||||||| | |||||||||  |||||||    
T  34961796 --aaagagtgttcaaacgagagtgttattagcatt 34961828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 281
Target Start/End: Original strand, 50879471 - 50879559
Alignment:
Q  193 tcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    |||||||| || ||||| ||||||||| |||||||||||| ||| |||  ||| |||||| |||| ||| ||||||||| |||| ||||    
T  50879471 tcacttttgaacactctttctagcactcactcttttattgaatggaattcatgcatgtcccaccattttatgtgggttctatttccaaa 50879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 53871046 - 53871002
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcact 219  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||    
T  53871046 gaggaatgctagcaacactcactttccaacactctctctaacact 53871002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 28304144 - 28304089
Alignment:
Q  230 ttggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    |||||||||||||||| |||||| ||||||||  ||||| || |||||||||||||    
T  28304144 ttggatgaaatcaatgcatgtcccaccacttttagtggggtccattttcaaagtgt 28304089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 363
Target Start/End: Complemental strand, 1560047 - 1559909
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    |||||||| ||| ||||||  ||||||| || | ||| |||| |||| |||| | | |||||||| || |||||||||||||| | ||| | | | ||||    
T  1560047 ttttattgaatgtaatcaacatatgtcccactaatttttgtgagttctatttcctaggtgtagactcaaaatgatttaaaccaataagaaattcaatatt 1559948  T
Q  325 agagagagtgttcataagagagtgttgctagcattactc 363  Q
    || ||||||||||| || | ||||||| ||||| |||||    
T  1559947 agtgagagtgttcaaaataaagtgttgttagcactactc 1559909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 16178739 - 16178697
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||| | || |||||||||||||||||||||||||||    
T  16178739 actctctctaactctcactcttttattggatgaaatcaatgta 16178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 20225388 - 20225350
Alignment:
Q  325 agagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  20225388 agagagagtgttcaaaagagagtgttgctagcactactc 20225350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 362
Target Start/End: Complemental strand, 5995052 - 5994863
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    |||||| ||||||  ||| || |||||||| ||||||| || |||| | ||| ||||||||| |||  |||||||| |  ||||||||  ||||   | |    
T  5995052 cgaggattgctagggacattctcttttcaacactctctttaacactcattctcttattggataaaactaatgtatgactcaccactttaagtggaaccca 5994953  T
Q  274 ttttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    ||| ||| |||| |||||||| |||||||||  || | ||| ||||| | || ||||||||||| | |||||| ||||||||||| ||||    
T  5994952 tttccaatgtgtgagacccaccatgatttaagtcaattagaaagtgaatgttggagagagtgttgaaaagagactgttgctagcactact 5994863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 363
Target Start/End: Complemental strand, 19321947 - 19321873
Alignment:
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||| |||||||| |||||| | ||||||| |||||||||||||  ||||| |||||||||  ||||||| |||||    
T  19321947 gacccgcaatgattcaaaccaataagagagtaagtattagagaga--gttcaaaagagagtgaagctagcactactc 19321873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 40812084 - 40812039
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    |||||||||  ||||||||||||||| || ||||||||||||||||    
T  40812084 agagtgagtgctagagagagtgttcaaaaaagagtgttgctagcat 40812039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 47237767 - 47237800
Alignment:
Q  207 tctctctagcacttactcttttattggatgaaat 240  Q
    ||||||||||||| ||||||||||||||||||||    
T  47237767 tctctctagcactcactcttttattggatgaaat 47237800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 51904616 - 51904657
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttac 222  Q
    |||||||||||||| |||||||| |||||||||| |||||||    
T  51904616 tgctagcaacactctcttttcaacactctctctaacacttac 51904657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 11895084 - 11895136
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttt 227  Q
    |||||||||||| ||||||||||||||||   ||||||||||||  |||||||    
T  11895084 gaggaatgctagtaacactcacttttcaaccatctctctagcacccactcttt 11895136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 13070126 - 13070054
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||| |||||||||||||| ||||| || | | |||||| |||| ||||||||||||  | |||||||||||    
T  13070126 gaggagtgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgta 13070054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 19933555 - 19933475
Alignment:
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||||  |||||||||||||| | | |  ||||  |||||| |||||||||||| || |||||||||||| ||||    
T  19933555 aaagtgtagactaacaatgatttaaactaataaatgagttggtattaaagagagtgttcaaaatagagtgttgctaacatt 19933475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 27654526 - 27654474
Alignment:
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||| ||||| |||||||||||||| | ||||||||||  ||||||||||||    
T  27654526 agagaatgagtgttagagagagtgttgaaaagagagtgtccctagcattactc 27654474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 33788053 - 33787989
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaa 239  Q
    ||||| |||||||||||||| |||||||| |  | ||||| |||| || ||||||||||||||||    
T  33788053 gaggagtgctagcaacactctcttttcaacatccactctaacactcacacttttattggatgaaa 33787989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 37586551 - 37586459
Alignment:
Q  273 attttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||| |||||||| ||||||||| | | | ||| ||||||| || ||||||||||| | ||||| ||||  |||||||| ||||    
T  37586551 attttcaaagtgtgagacccaccatgatttaagctaattagaaagtgagtgttggagagagtgttgaaaagagggtgtccctagcattcctct 37586459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 40925787 - 40925843
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggat 235  Q
    |||||||| | ||| | ||||| ||||||||||||| ||| ||||||||||||||||    
T  40925787 aatgctaggagcacgctctttttaatactctctctaacacctactcttttattggat 40925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 40977661 - 40977589
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat 248  Q
    |||||||||| ||||| |||| ||| || ||||  |||| |||||||| ||| |||||||||||| |||||||    
T  40977661 aggaatgctaacaacattcacatttgaacactccttctaacacttactttttcattggatgaaattaatgtat 40977589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 40991705 - 40991773
Alignment:
Q  296 tgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||| | ||| ||| |||||||||  ||||||||||||| | ||| |||||||||||||||| ||||    
T  40991705 tgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctct 40991773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 42925377 - 42925337
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    ||||| |||||||||||||| ||||||||||| ||||||||    
T  42925377 actctcttattggatgaaattaatgtatgtccgaccacttt 42925337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 47109334 - 47109402
Alignment:
Q  296 tgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||| ||| | ||| |||||| || ||||| || |||| ||||||||||||||| ||||||    
T  47109334 tgatttaaaccaatgaaaaagtaagtatttgaaagagtatttataaaagagtgttgctagcactactct 47109402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 5e-69; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 22189936 - 22190124
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  22189936 gaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaat 22190035  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||||| ||||||||||||||| | |  ||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  22190036 tttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttgttagcattactc 22190124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 27888279 - 27888468
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| |  |||||||||| |||| || || | ||||||| |||||||||||||||| |||||||||||||||||||||    
T  27888279 gaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaat 27888378  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||    
T  27888379 ttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctct 27888468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 175 - 359
Target Start/End: Original strand, 27949270 - 27949454
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||| |||| |||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||  |||||||||||| |||||||| ||||||     
T  27949270 gaggaaagctaacaacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaa 27949369  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27949370 tttcaaagtgtagacccacaatgatttaaactaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 27949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 11824072 - 11824254
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||| |||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||    
T  11824072 aatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttc 11824171  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||| ||||||||||||||||| || | ||| ||||||||||  |||||||||||| |||||||||||| |||||||||||    
T  11824172 aaagtgtaaacccacaatgatttaaatcaataagaaagtgagtatt--agagagtgttcaaaagagagtgttgttagcattactc 11824254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 175 - 353
Target Start/End: Original strand, 33008101 - 33008276
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||    
T  33008101 gaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctat 33008200  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgct 353  Q
    || ||| |||||||||||||||||||||||||| | | |||| ||||||||   |||||||||| ||||||||||||||    
T  33008201 ttccaatgtgtagacccacaatgatttaaaccaataaaagagagagtatta---agagtgttcaaaagagagtgttgct 33008276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 171 - 364
Target Start/End: Original strand, 14795124 - 14795315
Alignment:
Q  171 taacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggtt 270  Q
    |||||| |||||||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  14795124 taacgaagaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggtt 14795223  T
Q  271 caattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| |||||||| | ||| |||||||||||| | | ||||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  14795224 caatttttaaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgttc--aaaagagtgttgctagcattactct 14795315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 171 - 364
Target Start/End: Original strand, 15242116 - 15242307
Alignment:
Q  171 taacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggtt 270  Q
    |||||| |||||||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  15242116 taacgaagaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggtt 15242215  T
Q  271 caattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| |||||||| | ||| |||||||||||| | | ||||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  15242216 caatttttaaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgttc--aaaagagtgttgctagcattactct 15242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 178 - 362
Target Start/End: Original strand, 46517293 - 46517475
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||||||||||||||| || |||||  |||||||| |||| |||||||||| |||||||||||| ||| |||| | |||| ||||||||||||    
T  46517293 gaatgctagcaacactcactttttaacactct--ctagcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaatttt 46517390  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    |||||||||||| ||||||||||||||||| | ||||| ||||||||||||||  |||||| |||||||||||||||||||||||    
T  46517391 caaagtgtagactcacaatgatttaaaccaataagagaatgagtattagagaggctgttcaaaagagagtgttgctagcattact 46517475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 6442162 - 6442351
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| || ||||||||| ||||||| |||||||||| |||| | || ||||||| ||||||||||||||||| | |||| |||||| || ||||||    
T  6442162 gaggaatgttaacaacactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaat 6442261  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||||| ||| |||||||| |||| |||||||||| |||||||||    
T  6442262 tttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaagatagtgttcaaaagaaagtgttgctaacattactct 6442351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 170 - 352
Target Start/End: Original strand, 32205071 - 32205250
Alignment:
Q  170 ataacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggt 269  Q
    |||| |||||||||||||||||||||||||| || ||||||||||   || ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32205071 ataaagaggaatgctagcaacactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggt 32205167  T
Q  270 tcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgc 352  Q
    |||||||| ||||| |||  | |||||||||||||| | | ||||||||||||||||||||  |||||| |||| ||||||||    
T  32205168 tcaatttttaaagtataggtctacaatgatttaaactaataagagagtgagtattagagaggatgttcaaaagaaagtgttgc 32205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 31502647 - 31502504
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||| |||||||| |||| |||||||| |||||||    
T  31502647 gaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaat 31502548  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtg 318  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||    
T  31502547 tttcaaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 32213049 - 32212864
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||| ||||||||||||| || |||||||||||||||   |||||||||||||||||||||||||||||  || ||||||| || ||||||||||    
T  32213049 gaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttt 32212950  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||| ||||| ||||||||||||||||||| | ||||||||||||||| | || ||||||| ||||||||||||||||| |||||||    
T  32212949 taaaatgtag-cccacaatgatttaaaccaataagagagtgagtattatatagggtgttcaaaagagagtgttgctagcgttactct 32212864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 197 - 362
Target Start/End: Original strand, 7775019 - 7775183
Alignment:
Q  197 ttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaat 296  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || ||| |||    
T  7775019 ttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaat 7775117  T
Q  297 gatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    ||||||||| | | || |||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  7775118 gatttaaacaaataagtgagtgaatattagagagagtgttcaaaagagaatgttgttagcattact 7775183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 12263619 - 12263458
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||| |||||||||||| ||||||||| |||||||||| ||   |||||||||| ||||| ||||||||||||||| | |||||||||| || |||||    
T  12263619 gaggaacgctagcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaat 12263520  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  12263519 tttcaaagtgtagacccacaatgatttaaaccaataagatagtgagtattagagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 221 - 360
Target Start/End: Original strand, 11692222 - 11692361
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||||||||| | |  |||||||||    
T  11692222 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtgag 11692321  T
Q  321 tattagagagagtgttcataagagagtgttgctagcatta 360  Q
    |||||||||| ||||||| |||||||||||||||| ||||    
T  11692322 tattagagagtgtgttcaaaagagagtgttgctagtatta 11692361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 170 - 364
Target Start/End: Original strand, 39254075 - 39254269
Alignment:
Q  170 ataacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggt 269  Q
    |||| ||| ||||||||||||| ||||||||||| | ||||| ||||||| |||||||||||| || |||| |||||||||   |||||||||||| |||    
T  39254075 ataaagagaaatgctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggt 39254174  T
Q  270 tcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| ||| |||||||||||||| ||||||| || | ||||||||||| ||| |||||||||||| |||||| ||||| ||||||| ||||    
T  39254175 tcaatttttaaaatgtagacccacaataatttaaatcaataagagagtgagtgttaaagagagtgttcaaaagagaatgttgttagcattgctct 39254269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 225 - 362
Target Start/End: Complemental strand, 25686968 - 25686831
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||    
T  25686968 ttttatttgatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtatt 25686869  T
Q  325 agagagagtgttcataagagagtgttgctagcattact 362  Q
    ||| ||| |||||| ||||||||||||||| |||||||    
T  25686868 agaaagaatgttcaaaagagagtgttgctaacattact 25686831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 177 - 369
Target Start/End: Complemental strand, 48374618 - 48374428
Alignment:
Q  177 ggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    |||||||||||||||||||||||| || |||||||  || ||| |||||||||||| ||| |||  ||| |||||| |||||||| | ||||||| ||||    
T  48374618 ggaatgctagcaacactcacttttgaacactctct--agtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctattt 48374521  T
Q  277 tcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctcttta 369  Q
     ||||||||| || |||||| ||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  48374520 ccaaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgctagcactactcttttta 48374428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 179 - 364
Target Start/End: Complemental strand, 24539302 - 24539116
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||| |||||| |||||  | |||||||||| |||| ||||||||||||||| |||||||| ||||||| |||||||| | ||| ||| |||| |    
T  24539302 aatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttcc 24539203  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| |||| |||||||| |||||||| ||| ||||||||||||| ||||||||||||| || |||||||||||||||||| ||||||    
T  24539202 aaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagcactactct 24539116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 358
Target Start/End: Complemental strand, 6580188 - 6580002
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattg---gatgaaatcaatgtatgtcctaccactttgtgtgggttc 271  Q
    |||||||| |||||||||||||||||||| ||||| ||| ||||| ||| |||| ||    | || | ||||||||||||  || ||||||||| |||||    
T  6580188 gaggaatggtagcaacactcacttttcaacactctttcttgcactcactttttttttttttggtggattcaatgtatgtctcactactttgtgtaggttc 6580089  T
Q  272 aattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    |||||||||| | | |||||||||| |||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  6580088 aattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttggtagcat 6580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 179 - 364
Target Start/End: Original strand, 13919781 - 13919967
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||||||| ||||| |  |||||||||||||||  ||| |||||||| |||||||||||||||||| |||||||| ||||||||| ||||||    
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttc 13919880  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| | || ||| |||||| | ||| | |  ||||||||  ||||||||||| ||| |||||||||||||||||||| ||||    
T  13919881 aaagtgtaggtcctacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctct 13919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 179 - 364
Target Start/End: Original strand, 17749695 - 17749881
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||| ||||||  ||||  | |||||||||| |||| ||||||||||||||| |||||||| ||||||| |||||||| | ||| ||  |||| |    
T  17749695 aatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttcc 17749794  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| |||| |||||||| |||||||| ||| ||||||||||||| ||||||||||||| || |||||||||||||||||| ||||||    
T  17749795 aaaatgtatgacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagcactactct 17749881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 19423014 - 19422854
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| |||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||||||||| ||| | |||| | |   | |||||    
T  19423014 gaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactatttt 19422915  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttca 338  Q
    | ||||||||| |||||||||||||||||| | | ||||||||||| ||||| ||||||||    
T  19422914 cgaagtgtagatccacaatgatttaaaccaataaaagagtgagtatcagagatagtgttca 19422854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 195 - 360
Target Start/End: Complemental strand, 44350965 - 44350800
Alignment:
Q  195 acttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccaca 294  Q
    ||||||||| ||| |||||| ||   ||| ||||||||||| |||||||||||||||    |||||||| | ||||||||||||||||||||||| ||||    
T  44350965 acttttcaacactttctctaacatccacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcaca 44350866  T
Q  295 atgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatta 360  Q
    |||||||||||||   | |||||||||||||||||  ||||||| |||||||||||| ||||||||    
T  44350865 atgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttgttagcatta 44350800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 176 - 288
Target Start/End: Complemental strand, 19494521 - 19494409
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    ||||||||||||| ||||| ||||| | |||| ||||||| ||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||| |||    
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 19494422  T
Q  276 ttcaaagtgtaga 288  Q
    |||||||||||||    
T  19494421 ttcaaagtgtaga 19494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 26703621 - 26703438
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||  |||| |  | ||||||||||||| ||||||||||||| |||||||||||||||||  |||||||| ||||||||| ||    
T  26703621 gaggaatgctagcaacactc--ttttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccat 26703524  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||  |||||||| | || ||| | |||| | ||| | | |||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  26703523 ttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcatt 26703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 44511112 - 44510999
Alignment:
Q  182 gctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    |||| ||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||  | |||||||| || |||||||||||||     
T  44511112 gctaacaacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaat 44511013  T
Q  282 gtgtagacccacaa 295  Q
    ||||||| ||||||    
T  44511012 gtgtagatccacaa 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 17354710 - 17354598
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||  |||| |  |||||||||| |||| | |||||||||||||||||||||||||||||| |||||||| ||||||||| ||    
T  17354710 gaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctat 17354611  T
Q  275 tttcaaagtgtag 287  Q
    || ||||||||||    
T  17354610 ttccaaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 25092840 - 25092712
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||| ||||||||||||||||| |||||||   ||||  ||||||| ||| |||| |||||||||||||||||| |||||||||| |||||||||||    
T  25092840 aatgctaacaacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttc 25092741  T
Q  279 aaagtgtagacccacaatgatttaaacca 307  Q
     |||| ||||| |||||| ||||||||||    
T  25092740 taagtatagacacacaataatttaaacca 25092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 25428659 - 25428472
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||||||||| ||||| |  ||||| | ||| ||| ||||||||||||  |||||||||||||||||| |||||||| ||||||||  ||||     
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttc 25428560  T
Q  278 caaagtgtaga-cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| || ||| |||||| | ||| | | |||||||||  || |||||||| ||| ||||||||||||||| |||| ||||    
T  25428559 caaagtgtagatcctacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatttctct 25428472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 357
Target Start/End: Original strand, 45909453 - 45909636
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactctttt-attggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||| |||||||  ||||| |  |||||| |||||| | |||||||| ||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  45909453 aggaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 45909552  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    || |||| |||| | || ||| |||||| | ||| | | ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  45909553 ttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 32178981 - 32178824
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||| || | ||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||| | |||||| ||| |   |||||||||    
T  32178981 gaatgctagtaaaattcacttttcaacactctct--agcacttactattttattggatgaaattaatgtatgttccaccactctgtttta-ttcaatttt 32178885  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttca 338  Q
    ||||||||| || |||||||||||||| || | ||||||||| ||| ||||||| ||||||    
T  32178884 caaagtgtatacacacaatgatttaaatcaataagagagtgattatcagagagattgttca 32178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 36845701 - 36845573
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| |||||||| ||| ||||||| ||| ||| || | || |||||||||||| ||||||||||| ||| ||  |||| |||||||||||||||||||    
T  36845701 gaatgttagcaacattcatttttcaacactttctttatcgctcactcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaatttt 36845603  T
Q  278 caaagtgtagacccacaatgatttaaacca 307  Q
    |||||| |||||||||||||||||||||||    
T  36845602 caaagtatagacccacaatgatttaaacca 36845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 287
Target Start/End: Original strand, 22786149 - 22786260
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    ||||||||||||||||||| ||||| |  ||||||||||||||| ||| ||||||| | |||||||||||||||||  |||||||| ||||||||| |||    
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatt 22786248  T
Q  276 ttcaaagtgtag 287  Q
    | ||||||||||    
T  22786249 tccaaagtgtag 22786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 362
Target Start/End: Original strand, 7459353 - 7459527
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    ||||||||||||| || | ||||| ||  ||| | ||||||||| ||| |||||||||||| | | |||||||| |||| | |||||||||||| | |||    
T  7459353 aacactcactttttaacattctctataatactcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatag 7459452  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    | ||||||| |||||||||| | | ||||||||||||| ||||||| |||| |  | ||||||||||||||||||    
T  7459453 atccacaataatttaaaccaataaaagagtgagtattaaagagagtattcaaataaaagtgttgctagcattact 7459527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 8073473 - 8073367
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||| |||| |||||||| ||||||| | |||  |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  |||||    
T  8073473 acgaggaatactagtaacactcatttttcaacattcttcctagcactcactcttttatcggatgaaatcaatgtatgtcccaccactttgtgtaagttca 8073374  T
Q  273 attttca 279  Q
    |||||||    
T  8073373 attttca 8073367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 12270985 - 12271095
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||  ||||||||| ||||||| |||||   ||||||||||  |||||||||||||||||||| |||||||||||| ||||| ||    
T  12270985 gaggaatgctagcaacac--acttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgt-ggttctat 12271081  T
Q  275 tttcaaagtgtaga 288  Q
    ||||||||||||||    
T  12271082 tttcaaagtgtaga 12271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 9648919 - 9649053
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaa--tcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||||| | ||||| |||| |||||||||| ||||||| ||| ||| ||||||| |||  ||||||||||| | ||||||||||| ||||||     
T  9648919 gaggaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggttct 9649018  T
Q  273 attttcaaagtgtagacccacaatgatttaaacca 307  Q
     ||| ||| ||||| ||||||||||||||||||||    
T  9649019 gtttccaatgtgtatacccacaatgatttaaacca 9649053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 359
Target Start/End: Complemental strand, 19841022 - 19840883
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagagtga 319  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||| | || | | |||||| | ||| | | |||||||    
T  19841022 actcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgtaggtcctatattgatttcacccaataaaagagtga 19840923  T
Q  320 gtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||  ||||||||||| ||| || |||||||||||||||||    
T  19840922 gtgctagagagagtgctcaaaatagagtgttgctagcatt 19840883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 32605333 - 32605457
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||| ||||||||||  |||||||| ||||| | ||||||| | |||||||| ||||||||||||||||||||  |  ||||||||||| |||||||||     
T  32605333 aatgttagcaacacttgcttttcaacactctttttagcactcattcttttat-ggatgaaatcaatgtatgtctcattactttgtgtggattcaattttt 32605431  T
Q  279 aaagtgtagacccacaatgatttaaa 304  Q
    ||||||||| | ||||||||||||||    
T  32605432 aaagtgtaggctcacaatgatttaaa 32605457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 345
Target Start/End: Complemental strand, 10934149 - 10933978
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    |||||||||||  |||||||||  ||| || ||||||||||  | | | ||||||||||||| |||| ||| ||||||  |||||||||| ||| ||| |    
T  10934149 cgaggaatgctttcaacactcatgttttaacactctctctattattcattcttttattggataaaattaatatatgtctcaccactttgtatggtttcta 10934050  T
Q  274 ttttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagaga 345  Q
    ||| |||||| || |||||||||||||||||| | | ||||| ||||||||| | |||| ||||| ||||||    
T  10934049 tttccaaagtataaacccacaatgatttaaactaataagagattgagtattaaaaagagcgttcaaaagaga 10933978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 27320441 - 27320547
Alignment:
Q  245 gtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagag 344  Q
    |||| ||| |||| ||||||| ||||||||||| |||||||||||||||||| |||||||  | | ||| |||||||| |||||||||| |||| |||||    
T  27320441 gtatatcccaccattttgtgtaggttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaagag 27320540  T
Q  345 agtgttg 351  Q
    | |||||    
T  27320541 aatgttg 27320547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 47294875 - 47295005
Alignment:
Q  11 ttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggctt 110  Q
    |||| ||||||  |||||| ||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||| | | ||| || |||||||  |||    
T  47294875 ttttgtccttgcaaaaacttagtggtttagtccaatttgtgaagtacatattgaagaagctcttagtttattttcaacttaggaatgagttcatgaactt 47294974  T
Q  111 aatctaggacctatcgattttgagctggatg 141  Q
    ||| | ||| |||| || |||||| ||||||    
T  47294975 aatttgggatctattgactttgagttggatg 47295005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 11567860 - 11567743
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| ||||| |||||||||||||||||||| || ||  | || |||||||| | ||||||||| || ||||    
T  11567860 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttggtttattatctgctctagaatgggttcacgagcttaatcttggtccta 11567761  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  11567760 tggattttgagatggatg 11567743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 37549616 - 37549693
Alignment:
Q  170 ataacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| |||||||||||||||||||| ||||| |  ||| ||||||||||||||||||||||||| |||| ||||||||    
T  37549616 ataaagaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 37549693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 13919966 - 13919894
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||| |||| |||||||| |||||||||||||    
T  13919966 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 13919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 359
Target Start/End: Original strand, 14759669 - 14759825
Alignment:
Q  204 tactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgattta 302  Q
    ||||||| |||||||| ||||||||||||  |||||||||| ||||||| ||||||||  || ||||| |||| ||||||||| | || ||| | ||||     
T  14759669 tactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttc 14759768  T
Q  303 aaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    | ||| | | |||||| ||  ||| ||||||| ||| ||||||||||||||||||||    
T  14759769 atccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 14759825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 10619574 - 10619464
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| |  |||||||||||||| |||||| || |||| |||||||||| ||| ||| | |||||| ||||||||| ||    
T  10619574 gaggaatgctagcaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatatatatcccatcactttatgtgggttccat 10619476  T
Q  275 tttcaaagtgta 286  Q
    |  |||||||||    
T  10619475 tgacaaagtgta 10619464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 45909636 - 45909570
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||||||||| | |||||||||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 354
Target Start/End: Complemental strand, 46994496 - 46994366
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtat 323  Q
    ||||||| ||||||||||||||||| || ||||||||  |||   || |||| |||||||| |||||||| ||||||||| ||| | | | ||||||| |    
T  46994496 ttttattagatgaaatcaatgtatgacccaccactttaagtgatatccatttccaaagtgtgagacccaccatgatttaagccaataaaaaagtgagtgt 46994397  T
Q  324 tagagagagtgttcataagagagtgttgcta 354  Q
    ||||||||| ||| | |||||||||||||||    
T  46994396 tagagagagcgttaaaaagagagtgttgcta 46994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 14759830 - 14759757
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||||||||||| ||||| |  |||||| |||||||  |||||||||||||||||||| ||||||    
T  14759830 cgaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 14759757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 18807264 - 18807381
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | |||||||||  | |||||||| ||||| |||||||||||||||||||| || || || || |||||||| | |||||| || || ||||    
T  18807264 aaaactgaatggtttagtccgttatgtgaagttcatataggagaagctcttggtttattatccgctttagaatgggttcacgagcttaaccttggtccta 18807363  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  18807364 tggattttgagatggatg 18807381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 19840879 - 19840948
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaat 244  Q
    ||||||||||||||||||||  |||| |  ||||||||||||||| ||||||||||||| ||||||||||    
T  19840879 gaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 36845566 - 36845495
Alignment:
Q  283 tgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    ||||||||||||||||||||||||| | ||||||||| ||||  ||||||| |||| || ||||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttgcta 36845495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 286
Target Start/End: Complemental strand, 9111516 - 9111406
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    |||||||| || |||| ||| |||| || ||||| | ||||| | ||||||||||| |||||||||||| ||| |||||||||||| | ||| |||||||    
T  9111516 aggaatgcaagtaacattcattttttaacactctatttagcattcactcttttattagatgaaatcaatctatatcctaccactttatttggattcaatt 9111417  T
Q  276 ttcaaagtgta 286  Q
    || ||| ||||    
T  9111416 tttaaaatgta 9111406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 26703436 - 26703506
Alignment:
Q  177 ggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||| ||| | |  ||||||||||||||| ||||||||||||| |||||| ||||||    
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 31874117 - 31874174
Alignment:
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 2520630 - 2520698
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaa 243  Q
    ||||| |||||| ||||||| |||||||| |||||||| | |||| ||||||||||||| |||||||||    
T  2520630 gaggagtgctaggaacactctcttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 25428477 - 25428545
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| ||||||||||| ||||| |  ||||||| ||||||| ||||||||||||||| |||||||||||    
T  25428477 aatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgta 25428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 27320226 - 27320294
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||| ||| ||||||| |||||||| | |||| |||||||||||| || |||||||||||    
T  27320226 aatgctagcaacattcatttttcaacactctctccaacactcactcttttattgaataaaatcaatgta 27320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 31874061 - 31874105
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcc 252  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgtatgtcc 31874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 360
Target Start/End: Original strand, 31759839 - 31759943
Alignment:
Q  254 accactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgct 353  Q
    |||||||||||||  ||||||||  ||||| ||||| | ||||||||||| ||| | ||| | ||||||||  |||||||||| | ||||| ||||||||    
T  31759839 accactttgtgtgacttcaatttataaagtatagactcgcaatgatttaagccaataagaaaatgagtatt--agagagtgtttaaaagagggtgttgct 31759936  T
Q  354 agcatta 360  Q
    |||||||    
T  31759937 agcatta 31759943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 307
Target Start/End: Original strand, 32055594 - 32055705
Alignment:
Q  196 cttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaa 295  Q
    ||||| || ||| |||||| |||| |||| ||||||||||||||||| | ||||||| |||||||| ||   || | ||| ||||| ||||||| ||||     
T  32055594 cttttgaacactatctctaacactaactcatttattggatgaaatcattttatgtcccaccactttatgcaagtactattgtcaaactgtagactcacat 32055693  T
Q  296 tgatttaaacca 307  Q
    ||||||||||||    
T  32055694 tgatttaaacca 32055705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 7774944 - 7775009
Alignment:
Q  277 tcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataaga 343  Q
    ||||||||| |||| |||||||||||||||| | ||||||| | |||||||||||||||||| ||||    
T  7774944 tcaaagtgtggacc-acaatgatttaaaccaataagagagtaaatattagagagagtgttcaaaaga 7775009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  286 agacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||||||||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 38065398 - 38065328
Alignment:
Q  286 agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    ||||||||  |||||||||||| | ||| |||||||||| ||||||||||| |  ||||||||||||||||    
T  38065398 agacccaccttgatttaaaccaataagaaagtgagtatttgagagagtgttgaagagagagtgttgctagc 38065328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 31960036 - 31959967
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat 248  Q
    ||||||| |||||||| ||||| |  ||||||||||||||| |||  ||||||||||||||| |||||||    
T  31960036 aatgctaacaacactctcttttgagcactctctctagcactcacttatttattggatgaaattaatgtat 31959967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 3855905 - 3855861
Alignment:
Q  263 tgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  3855905 tgtgggttcaattttcaaagttcagacctacaatgatttaaacca 3855861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 10477284 - 10477340
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    |||||||||||||||||| |||||||   |||| ||||||| |||||||||||||||    
T  10477284 ttttattggatgaaatcagtgtatgtttcaccattttgtgtaggttcaattttcaaa 10477340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 23834624 - 23834740
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| |||||  || |||||||||||||||| || ||  | || |||||||| | ||||||||| || ||||    
T  23834624 aaaactgaatggtttagtccgatatgtgaagttcatatacgaaaagctcttggtttattatctgctctagaatgggttcacgagcttaatcttggtccta 23834723  T
Q  124 tcgattttgagctggat 140  Q
    |  |||||||| |||||    
T  23834724 tgaattttgagatggat 23834740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 27888346 - 27888278
Alignment:
Q  296 tgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||| | ||| |||||| |||||| |||||||||||| ||| ||| |||||||||||||||| ||||    
T  27888346 tgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctct 27888278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 31628080 - 31628180
Alignment:
Q  259 tttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    ||||| ||||||| ||||  ||||||| |||| || ||||||||||||| | ||||||| ||||||| ||| |||||||| |||  ||||| | ||||||    
T  31628080 tttgtttgggttctatttataaagtgttgacctacgatgatttaaaccaataagagagtaagtattaaagatagtgttcaaaagcaagtgtcgttagcat 31628179  T
Q  359 t 359  Q
    |    
T  31628180 t 31628180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 42863617 - 42863573
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcact 219  Q
    |||||||||||||||||||||||||| || |||||||||| ||||    
T  42863617 gaggaatgctagcaacactcacttttaaacactctctctaacact 42863573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 45206077 - 45206025
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtggg 268  Q
    |||||||||||| || ||||||||||||||||||||  ||||| |||||||||    
T  45206077 cacttactctttcatcggatgaaatcaatgtatgtctcaccacattgtgtggg 45206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 46067940 - 46068036
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctct-agcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    |||||||||||||| ||||| |   |||||||| | |||| ||||  ||||||| |||||||||||||||| | |||||||| ||||||||| ||||    
T  46067940 tgctagcaacactctctttttagcgctctctcttaacactcactcccttattggttgaaatcaatgtatgttccaccactttatgtgggttccattt 46068036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 322
Target Start/End: Original strand, 1687985 - 1688127
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||| | |||| || |||||||||  || | ||| |||  |||||||||||  |||||||||  |||||||||  || |||  |||| |    
T  1687985 aatgctagcaacact-attttttaacactctctctgtcattcactttttctttggatgaaattgatgtatgtctcaccactttgcatgagttttatttcc 1688083  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagta 322  Q
    |||||||||||| |||| ||||||| ||| | | ||||||||||    
T  1688084 aaagtgtagacctacaacgatttaacccaataaaagagtgagta 1688127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 17813923 - 17813857
Alignment:
Q  209 tctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    ||||||||||| |||||||||||  | |||||||||||||| || ||||||||||||| |||| ||||    
T  17813923 tctctagcactcactcttttattaaaagaaatcaatgtatg-cccaccactttgtgtgagttctattt 17813857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 23934084 - 23934021
Alignment:
Q  183 ctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgt 246  Q
    |||||||||||| ||||| |  ||| | ||||||||||||||||||||||| | ||||||||||    
T  23934084 ctagcaacactctcttttaagcactttgtctagcacttactcttttattgggtaaaatcaatgt 23934021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 24539256 - 24539307
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||| ||||||||||||| || |||||||||| ||||||||| ||||    
T  24539256 agagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatttctct 24539307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 27888467 - 27888400
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatca 242  Q
    |||||||||||||||||||| ||||| |  |||||||||| |||| ||||| ||||||| | ||||||    
T  27888467 gaggaatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatca 27888400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 28713054 - 28713101
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgt 263  Q
    ||||||||||||||||| ||||||||||| ||||||  ||||||||||    
T  28713054 cacttactcttttattgaatgaaatcaatatatgtctcaccactttgt 28713101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 30742615 - 30742544
Alignment:
Q  283 tgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    |||||||| ||||||||||||| || | ||| | ||| |||||||| ||||||||| || ||||||||||||    
T  30742615 tgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgttcaaaatagagtgttgcta 30742544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 331
Target Start/End: Complemental strand, 31731439 - 31731282
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat----gtcctaccactttgtgtgggttc 271  Q
    ||||||| ||||||||||||||||| || ||||||| |  |||| | | || |||||||||  ||||||||||    || | ||||||||||||  ||||    
T  31731439 aggaatgttagcaacactcacttttgaacactctctat--cactgaatattctattggatgtgatcaatgtatatatgttccaccactttgtgtatgttc 31731342  T
Q  272 aattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagaga 331  Q
     |||| |||| | ||||||| | || |||||||||| | ||| | |||||||||||||||    
T  31731341 tatttccaaaatatagacccgcgataatttaaaccaataagaaaatgagtattagagaga 31731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 2520773 - 2520715
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattgg 233  Q
    |||||||||||||||||||| |||||||| |||||| ||| |||| || | ||||||||    
T  2520773 gaggaatgctagcaacactctcttttcaacactctcactatcactcacacatttattgg 2520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 23564156 - 23564086
Alignment:
Q  237 aaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||| ||||||||||  |||||||||| || |||| |||||||||||||||| ||||  | ||||||||||    
T  23564156 aaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaacca 23564086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 20954859 - 20954798
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatca 242  Q
    |||||||||||||| |||||||| |||||||| | |||| ||| ||||||||| | ||||||    
T  20954859 tgctagcaacactctcttttcaacactctctcaaacactcacttttttattggcttaaatca 20954798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 38065485 - 38065415
Alignment:
Q  189 acactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    |||||| |||||||||||||| |  | |||| ||| |||||||||||||||| ||||||| ||| ||||||||    
T  38065485 acactctcttttcaatactcttt--aacactaacttttttattggatgaaattaatgtatctcccaccacttt 38065415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 22786196 - 22786152
Alignment:
Q  315 agtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||  ||||||||||| ||| ||||||||||||||||||||    
T  22786196 agtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 22786152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 24789108 - 24789140
Alignment:
Q  58 atattggagaagctcttggtttattttcagcgt 90  Q
    ||||||||||||||||||||||||| |||||||    
T  24789108 atattggagaagctcttggtttattctcagcgt 24789140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 32205115 - 32205075
Alignment:
Q  324 tagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||| ||| |||||||||||||||| ||||    
T  32205115 tagagagagtgttcaaaagtgagtgttgctagcattcctct 32205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 35549683 - 35549643
Alignment:
Q  324 tagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||| | |||||||||||||||||| ||||||    
T  35549683 tagagagagtgttgaaaagagagtgttgctagcactactct 35549643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 42274688 - 42274656
Alignment:
Q  219 ttactcttttattggatgaaatcaatgtatgtc 251  Q
    ||||||||||||| |||||||||||||||||||    
T  42274688 ttactcttttatttgatgaaatcaatgtatgtc 42274656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 42863569 - 42863613
Alignment:
Q  315 agtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||| |||||||||||||| | ||| ||||||||||||||||    
T  42863569 agtgagtgttagagagagtgtttaaaagtgagtgttgctagcatt 42863613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 3e-67; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 1977356 - 1977167
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||| |||||||||| || ||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  1977356 gaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaat 1977257  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||| ||||| ||||| |||||||||||||    
T  1977256 tttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgttactagcattactct 1977167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 16983391 - 16983580
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||  |||||||||| |||||| | ||||||| | ||||||||| |||||||||    
T  16983391 gaggaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaat 16983490  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16983491 tttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcattactct 16983580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 178 - 367
Target Start/End: Complemental strand, 28414049 - 28413861
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||| ||||||||||||||||| |||||||||||| || ||| ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaatttt 28413950  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctctt 367  Q
    |||||| |||||||| |||||||||||||| | | ||| |||||||||| | ||||||||| ||||||||  ||||||||||||||||||    
T  28413949 caaagtatagacccataatgatttaaaccaataaaagaatgagtattag-gcgagtgttcaaaagagagtactgctagcattactctctt 28413861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 176 - 356
Target Start/End: Original strand, 5979878 - 5980057
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    |||||||||||||||||| ||||||||| ||||||||||| |   |||||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  5979878 aggaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaatt 5979977  T
Q  276 ttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagc 356  Q
    ||||||||||  || ||||||| ||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||||    
T  5979978 ttcaaagtgtgaactcacaatggttt-aaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagc 5980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 175 - 366
Target Start/End: Complemental strand, 34861368 - 34861184
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||| | |||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  34861368 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaat 34861271  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactctct 366  Q
    |||||||||     |||||||| |||||||||| | |||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  34861270 tttcaaagt-----cccacaataatttaaaccaataagagagtgagtattagggagggtgttcaaaagagagtgttgctagcattagtctct 34861184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 32072098 - 32072255
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||     
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaattttt 32072197  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||||||||||||||| ||||||| || | ||||| || | |||||||||||||||    
T  32072198 aaagtgtagacccacaattatttaaatcaataagagaatgggcattagagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 178 - 363
Target Start/End: Original strand, 8903852 - 8904037
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| |||||||||||| ||||||| ||||||||||| ||| |||  |||||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  8903852 gaatgttagcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaatttt 8903951  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||||||||||||||||||||||| | ||||||| |||| |||| |   |||||| |||||||||||| ||| |||||||    
T  8903952 caaagtgtagacccacaatgatttaaaccaataagagagtaagtaatagaaaagatgttcaaaagagagtgttgttagtattactc 8904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 364
Target Start/End: Complemental strand, 9952936 - 9952752
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||| |||| | ||||||||| ||||||||||||||| | | ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  9952936 aatgctagtaacatttacttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttc 9952837  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| |||||||||||||||||||| | ||| | ||||||||  |||||||||||| ||||||||||||||| | |||||||    
T  9952836 aaagtgtaaacccacaatgatttaaaccaataagataatgagtatttaagagagtgttca-aagagagtgttgctaacgttactct 9952752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 35151912 - 35151728
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| |||||||||||||||||| || ||||| | ||||| |||||||||||||||||||||||||||||||||| |||| |||||| || ||||||    
T  35151912 gaggaatactagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaat 35151813  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||| |||||||||||||||||| ||| |||| | | ||| ||||| ||||| | |||||||||| ||||||||||||||||||||    
T  35151812 ttttaaagtgtagacccacaataattcaaactaataagaaagtgaatattaaatagagtgttcaaaagagagtgttgctagcatt 35151728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 24056098 - 24055932
Alignment:
Q  185 agcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtg 284  Q
    |||||||||||||||||||  |||||| |||||||  |||||||||  |||||||| ||||||||||| ||||||||||||  |||||||||||||||||    
T  24056098 agcaacactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtg 24055999  T
Q  285 tagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
    |||||||||||| |||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||    
T  24055998 tagacccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 205 - 364
Target Start/End: Complemental strand, 17499386 - 17499229
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||||||||   |||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  17499386 actctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaa 17499287  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| | |||||||||||||||||||||||  ||  || ||||||||||||||||||||||    
T  17499286 ccaataagagagtgagtattagagagagttgtc--aaaagagtgttgctagcattactct 17499229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 8914768 - 8914929
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| |   ||||||||| |||| ||||||| ||||||| ||| |||||||||||| ||||||||||||||||||| |    
T  8914768 gaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatt 8914867  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||   ||||||||||||    
T  8914868 tttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgtt 8914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 13407507 - 13407322
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||  ||||||||||  ||||  | |||||||||| |||| ||| ||||||||||| |||||||||||||||| |||| |||  |||||||| ||    
T  13407507 gaggaatgtcagcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctat 13407408  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||||| |||||||| |||||||| ||| ||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  13407407 tttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttgctagcatt 13407322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 175 - 347
Target Start/End: Complemental strand, 7493530 - 7493353
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaa----tgtatgtcctaccactttgtgt-gggt 269  Q
    |||||||| || ||| |||||||||| || |||||||||| |||||| | ||||||||||||||||||     ||| |||| ||||||||||||| ||||    
T  7493530 gaggaatgttaacaatactcacttttaaacactctctctaacacttatttttttattggatgaaatcatatattgtgtgtcttaccactttgtgttgggt 7493431  T
Q  270 tcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagt 347  Q
    || ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  7493430 tctattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagaaagagtgttcataagagagt 7493353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 330
Target Start/End: Original strand, 43506535 - 43506687
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || |||||||  | |||| ||| |||||||||||  ||||||||||||| | |||||||||||||||||| |     
T  43506535 gaggaatgctagcaacactcacttttgaacactctct--aacactcact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttctac 43506631  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagag 330  Q
    |||||| |||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  43506632 tttcaatgtgtagacccacaatgatttaagccaataagagagtgagtattagagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 23685131 - 23685313
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||| ||||||||  | |||||||  |||||| ||| |||||||||||||||||||||||||||| |||||||| || | |||| ||||     
T  23685131 gaatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 23685230  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||  | ||||||||||||||| |     ||| |||||||||||||||||||| ||||||||| |||||||| ||||||    
T  23685231 caaagtgtagattcgcaatgatttaaaccaat----aagttagtattagagagagtgttcaaaagagagtggtgctagcactactct 23685313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 41727427 - 41727588
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||  |||||||||||||| || ||||||| ||||| | |||||||| || ||| |||||||||||||||| ||| |||||||| |||||  |    
T  41727427 gaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgt 41727526  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||| || |||||||| || ||||||||||||||   ||||||||||||||||||||||||||    
T  41727527 ttttaatgtgtagactcataatgatttaaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 364
Target Start/End: Complemental strand, 36804992 - 36804833
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||||||  ||| ||| | |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| | || | ||||||| |||||||    
T  36804992 actctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaa 36804893  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     || | ||||||| ||||||||||||| |||| | |||||||||||| | ||||| ||||    
T  36804892 tcaataagagagtaagtattagagagaatgttgaaaagagagtgttgttggcatttctct 36804833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 1961295 - 1961400
Alignment:
Q  191 actcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacc 290  Q
    ||||||||||| || ||||||||| |||||| ||||||||||||| ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||    
T  1961295 actcacttttcgatgctctctctaccacttaatcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtagacc 1961394  T
Q  291 cacaat 296  Q
     |||||    
T  1961395 aacaat 1961400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 14236335 - 14236496
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| || |||||||| |||||||| ||| | |||| |||| | | |||||||||| ||||| ||  ||||||| ||||||||||||  |||||||    
T  14236335 gaggaatgttaacaacactctcttttcaacactttttctaccactcatttttttattggaagaaattaaaatatgtcccaccactttgtgtaagttcaat 14236434  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||| ||||||||| | |||||| ||||||||||   ||||||||||||||||||||||||||    
T  14236435 tttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 351
Target Start/End: Original strand, 4674911 - 4675079
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| |||||||| |||||||| |||||||||| ||  ||| ||||||||||| ||||||||||||||    |||| ||||||||||| ||| ||||||    
T  4674911 gaatgttagcaacattcactttt-aatactctctttaaaactcactcttttattagatgaaatcaatgt----cctatcactttgtgtgagtttaatttt 4675005  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
    |||||||||| | ||||||||||||||||| | | | | ||| ||||||| |||||||||| || |||||||||    
T  4675006 caaagtgtagtcacacaatgatttaaaccaataaaaaaatgaatattagaaagagtgttcaaaatagagtgttg 4675079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 357
Target Start/End: Original strand, 6387564 - 6387741
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||||||| |||||    || ||||||| |||| ||||||||||||||| |||||||||||||||| |||| ||| ||||||||| |||| |    
T  6387564 aatgctagcaacactctctttt--ggacactctctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttcc 6387661  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    ||||| || |||||||| || ||||| ||| | ||||| ||||| ||||||||||||| || ||| || |||||||||||    
T  6387662 aaagtatacgacccacattgttttaacccaataagagaatgagtgttagagagagtgtccaaaagggattgttgctagca 6387741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 350
Target Start/End: Original strand, 31301112 - 31301286
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||  ||||||||||||| || ||| | ||  ||||| |||||||||||||||||||||||||||||| | ||||||||||||| |||| ||    
T  31301112 gaggaatgctaataacactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctat 31301211  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgtt 350  Q
    |||||| |||||||  || ||| |||||||||| | ||||| ||| |||| |||| | ||| || |||||||||||    
T  31301212 tttcaatgtgtaga-tcataataatttaaaccaataagagaatgaatatttgagataatgtacaaaagagagtgtt 31301286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 364
Target Start/End: Complemental strand, 11962857 - 11962676
Alignment:
Q  182 gctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    |||||| ||||||||||||||| || |||| ||  ||| |||||||||||| || ||||||| |||| ||| |||| ||| ||| |||||||||||||||    
T  11962857 gctagcgacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaa 11962758  T
Q  282 gtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| ||| |||||||||||||| | | | || ||||||||   |||||||||| |||||  ||||||||||||| ||||    
T  11962757 gtgtagatcca-aatgatttaaaccaataaaaaagcgagtattaacaagagtgttcaaaagaggatgttgctagcattgctct 11962676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 225 - 363
Target Start/End: Original strand, 13214542 - 13214680
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    |||||||||||| ||| ||||||||||| | || ||||||| | ||||||||||||||||||||||||||||  | ||||| | | |||||| |||||||    
T  13214542 ttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtatt 13214641  T
Q  325 agagagagtgttcataagagagtgttgctagcattactc 363  Q
    || ||||||||||| || ||| ||||||||| |||||||    
T  13214642 agggagagtgttcaaaatagaatgttgctagtattactc 13214680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 348
Target Start/End: Original strand, 35689490 - 35689651
Alignment:
Q  188 aacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-a 286  Q
    ||||||| ||||| |  ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||||| |    
T  35689490 aacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaa 35689589  T
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtg 348  Q
    | |||||| || ||| | ||| | | | |||||||  ||||||||||| ||| |||||||||    
T  35689590 gtcccacattgttttcacccaataaaaaagtgagtgctagagagagtgctcaaaagagagtg 35689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 357
Target Start/End: Original strand, 45246432 - 45246613
Alignment:
Q  178 gaatgctagcaacactcactttt-ca-atactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    ||||||||| ||||||||||||| || | ||||||| ||||||| ||| ||||||||||| |||||||||||||||  |||||||| || | |||| |||    
T  45246432 gaatgctagtaacactcacttttgcacacactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatt 45246531  T
Q  276 ttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    | ||||||||||| |  |||||||||||| || | |||||| | ||||  |||||||| |||| |||||||||||| |||||    
T  45246532 tccaaagtgtagatctgcaatgatttaaatcaataagagagggggtataggagagagtattcaaaagagagtgttgatagca 45246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 7599605 - 7599493
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| |||||||||||  |||| || |||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||| |||||||||  |    
T  7599605 gaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttcctt 7599506  T
Q  275 tttcaaagtgtag 287  Q
    || ||||||||||    
T  7599505 ttccaaagtgtag 7599493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 17741680 - 17741552
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||||||| || |  ||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||| | |||| ||||||    
T  17741680 actctctctagcacgtaattgtttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaa 17741581  T
Q  305 ccactgagagagtgagtattagagagagt 333  Q
    ||| | |   | |||||||||||||||||    
T  17741580 ccaataaagaaatgagtattagagagagt 17741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 351
Target Start/End: Complemental strand, 6098928 - 6098784
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||| |||| ||  |||||| ||||||||| |  |||| ||| |||||||||||   ||||||||||||||||||||| ||||||| |||||||    
T  6098928 actctctctaacactcacatttttataggatgaaatta--gtatatcccaccactttgtgcatgttcaattttcaaagtgtagatccacaataatttaaa 6098831  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
     || | ||||||||||||||||||||| |||| | ||||||||||||    
T  6098830 tcaataagagagtgagtattagagagaatgtttaaaagagagtgttg 6098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 35797426 - 35797551
Alignment:
Q  209 tctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccac 308  Q
    ||||||||| | ||||||||||||||| |||||||||||||| | ||||||||||| | |||||||||| |||||||| | ||||||||||||||| ||     
T  35797426 tctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaa 35797525  T
Q  309 tgagagagtgagtattagagagagtgtt 336  Q
    |   ||||||||||||  ||||||||||    
T  35797526 t--aagagtgagtattgtagagagtgtt 35797551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 36629656 - 36629816
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| ||| ||||| |||| || ||| ||| ||||||||||||||||||| |||||||| |||||||||  || |||  ||||||||||| ||    
T  36629656 gaggaatgctaacaatactcatttttgaacactatctttagcacttactcttttattagatgaaataaatgtatgtattatcac--tgtgtgggttctat 36629753  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccact-gagagagtgagtattagagagagtgtt 336  Q
    || ||| |||||||||| ||||||| ||||||| |  | | | ||||||||||||||||||||    
T  36629754 ttccaatgtgtagacccgcaatgatctaaaccaataaaaaaaatgagtattagagagagtgtt 36629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 9192040 - 9192126
Alignment:
Q  217 acttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaa 303  Q
    ||||||||||| || |||| |||||||||||| ||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  9192040 acttactctttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 304
Target Start/End: Original strand, 17716856 - 17716977
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaa 280  Q
    ||||| ||||||||||||||||  ||||| |  | |||| ||  |||||||||||||||||||| ||||||| || | ||| |||||||| |||||||||    
T  17716856 tgctaacaacactcacttttcatcactcttt--aacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaa 17716953  T
Q  281 agtgtagacccacaatgatttaaa 304  Q
    |||||||||||||||||| |||||    
T  17716954 agtgtagacccacaatgagttaaa 17716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 4319909 - 4319787
Alignment:
Q  182 gctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    ||||||||||| |||||||||||| | ||| ||||| ||||| ||||||| ||| ||||||||| |||||  | |||||||||||  || ||||||||||    
T  4319909 gctagcaacacccacttttcaatattttctttagcatttacttttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaa 4319810  T
Q  282 gtgtagacccacaatgatttaaa 304  Q
    ||||||||| ||| | |||||||    
T  4319809 gtgtagacctacactaatttaaa 4319787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 9193427 - 9193568
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagta 322  Q
    ||||||||| |||||||| | ||||||||  || |||||||||  ||||||||||||||||||||||| ||||| ||| |||||| | | | | || |||    
T  9193427 tcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataaaaaaatgtgta 9193526  T
Q  323 ttagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||  ||  |||| || |||||||||||||||||||||||||    
T  9193527 ttaatgatcgtgtacaaaagagagtgttgctagcattactct 9193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 9453502 - 9453621
Alignment:
Q  218 cttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagagag 316  Q
    |||||||| ||||||||||||| ||||| |||||| | ||||||  ||||||||  |||||||| |||| ||||||||  ||||||| ||| | ||||||    
T  9453502 cttactctcttattggatgaaaccaatgcatgtcccatcactttacgtgggttcccttttcaaaatgtatgacccacatagatttaacccaattagagag 9453601  T
Q  317 tgagtattagagagagtgtt 336  Q
    ||||||||| ||||||||||    
T  9453602 tgagtattaaagagagtgtt 9453621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 1423746 - 1423855
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttac--tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    |||| ||||||||||||||||||||| ||||| |  || | ||||  ||||||||| ||| |||||||||||||||| ||||||||||  | ||||||||    
T  1423746 gaatactagcaacactcacttttcaacactcttt--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 1423843  T
Q  276 ttcaaagtgtag 287  Q
    ||||||||||||    
T  1423844 ttcaaagtgtag 1423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 363
Target Start/End: Original strand, 34952504 - 34952628
Alignment:
Q  239 atcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgag-agagtgagtattagagagagtgttc 337  Q
    |||||||||||||| |||| |||||| |  ||||||||||||  ||||||||| |||||||||||||||  ||| | | | |||||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaacca-agagaaaaataagtattagagagagtgttc 34952602  T
Q  338 ataagagagtgttgctagcattactc 363  Q
    | || | |||||||||| ||||||||    
T  34952603 aaaaaatagtgttgctaacattactc 34952628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 35819198 - 35819259
Alignment:
Q  244 tgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaac 305  Q
    ||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaac 35819259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 352
Target Start/End: Original strand, 17915849 - 17915986
Alignment:
Q  211 tctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactg 310  Q
    |||| |||||||||||||||| ||| |||  || | ||||||||||| ||||||| |||| ||||||||||||    ||  |||||||||||||| | |     
T  17915849 tctaacacttactcttttattagataaaaataacgaatgtcctaccattttgtgttggtttaattttcaaagt----acttacaatgatttaaactaata 17915944  T
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgc 352  Q
    | | |||||||||||||||||||||| | || ||||||||||    
T  17915945 ataaagtgagtattagagagagtgtttaaaaaagagtgttgc 17915986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 1205829 - 1205936
Alignment:
Q  180 atgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttca 279  Q
    ||||||||||||||| ||||| |  ||||||| ||||||| ||||||||||| | | |||| ||||||||||  |||||||| | ||||||| |||| ||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttcca 1205928  T
Q  280 aagtgtag 287  Q
    ||||||||    
T  1205929 aagtgtag 1205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 43026321 - 43026400
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||||||||| ||| ||||||| | | ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||    
T  43026321 ctctctagcactcacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaagtgtag 43026400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 26381629 - 26381512
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttcatgggcttaatctaggaccta 123  Q
    |||||||| | ||||||||| || |||||||| ||||| ||||||||||||| |||||| || ||  | || |||||||| | ||||||||| || ||||    
T  26381629 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttgatttattatctgctctagaatgggttcacgagcttaatcttggtccta 26381530  T
Q  124 tcgattttgagctggatg 141  Q
    | ||||||||| ||||||    
T  26381529 tggattttgagatggatg 26381512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 13856578 - 13856506
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||| ||||  ||||| |||| |||||||||| |||  |||||||||||||||||||||||||||    
T  13856578 gaggaatgctagtaacatccacttctcaacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 31691692 - 31691625
Alignment:
Q  177 ggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaat 244  Q
    |||||||||||||||||||||||| || ||||||| || |||| |||||||||||| | |||||||||    
T  31691692 ggaatgctagcaacactcacttttgaaaactctctttaacactcactcttttattgaacgaaatcaat 31691625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 1961402 - 1961444
Alignment:
Q  322 attagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  1961402 attagagagagtgttcaaaagagagtgttgctagcattactct 1961444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 10868021 - 10868094
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaa 281  Q
    ||||||| |||||| | |||||||||||||| |||||||||||   |||| ||||||||| |||||||||||||    
T  10868021 ctctctatcacttatttttttattggatgaactcaatgtatgtttcaccattttgtgtggattcaattttcaaa 10868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 336
Target Start/End: Original strand, 25915088 - 25915190
Alignment:
Q  237 aaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga---cccacaatgatttaaaccactgagagagtgagtattagagagagt 333  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||||||||||||    ||||| |||||| | ||| | | |||||||||| ||| ||||||    
T  25915088 aaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagtactagggagagt 25915187  T
Q  334 gtt 336  Q
    |||    
T  25915188 gtt 25915190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 37489505 - 37489437
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctac 255  Q
    |||||||||||||| |||| ||| |||| || ||| | |||||||||||||||||| ||||||||||||    
T  37489505 caacactcacttttgaatattctttctaacatttatttttttattggatgaaatcattgtatgtcctac 37489437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 359
Target Start/End: Complemental strand, 5095826 - 5095759
Alignment:
Q  292 acaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||||||||| | ||||||||||||||||||||  |||| | ||| ||||||| ||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagaggatgtttaaaagtgagtgttcctagcatt 5095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 45218698 - 45218614
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    ||||||||||||  |||||| |||||  |||| ||||||| ||||  ||||||||||||||||||||||||  ||||| ||||||||    
T  45218698 gaggaatgctagggacactctctttt--atacactctctaacactcgctcttttattggatgaaatcaatgcgtgtcccaccacttt 45218614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 33417678 - 33417791
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||||| |||||||  ||||| | |||||||||| ||||| ||   |||||| | ||||||||||| |||| | |||||||| ||||||||      
T  33417678 acgaggaatgctaacaacactttcttttgagtactctctct-gcactcacatctttattaggtgaaatcaatgcatgttccaccactttatgtgggtttc 33417776  T
Q  273 attttcaaagtgtag 287  Q
    |||| ||||||||||    
T  33417777 atttccaaagtgtag 33417791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 34952455 - 34952497
Alignment:
Q  172 aacgaggaatgctagcaacactcacttttcaatactctctcta 214  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  34952455 aacgaggaatgctagcaacactcactttttaacactctctcta 34952497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 45525059 - 45524897
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||| ||  |||||| |||||||| |||||||  | |||| | | | ||||||||| ||||||||||||| || ||||||||| ||||   | ||    
T  45525059 gaggaatgccagggacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttgagtggaacccat 45524960  T
Q  275 tttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    || |||||||| | |||||| ||||||||| ||| | | | ||||||| || |||||||||||    
T  45524959 ttccaaagtgtgaaacccaccatgatttaagccaattaaaaagtgagtgttggagagagtgtt 45524897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 12212126 - 12212199
Alignment:
Q  182 gctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctac 255  Q
    ||||||||||||| |||||||| | |||||||| || | |||||||| |||| ||||||||||||  |||||||    
T  12212126 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgtgggtcctac 12212199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 12456554 - 12456627
Alignment:
Q  182 gctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctac 255  Q
    ||||||||||||| |||||||| | |||||||| || | |||||||| |||| ||||||||||||  |||||||    
T  12456554 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgtgggtcctac 12456627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 13407316 - 13407389
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgt 246  Q
    |||||||||||||||||||||| ||||| || |||||||||| |||| | ||| | ||||| | ||||||||||    
T  13407316 acgaggaatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgt 13407389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 28212038 - 28211961
Alignment:
Q  206 ctctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagt 283  Q
    |||||||||||||| |||  |||||||| |||||||||| ||||||  |||| ||| ||||||||| ||||| |||||    
T  28212038 ctctctctagcactcacttatttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttttaaagt 28211961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 28485523 - 28485426
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-agacccacaatgatttaaaccactgag 312  Q
    |||||| ||| |||||||||||||| ||||||||||| ||||||||  ||||   | |||| |||||||| ||||||||| | |||||||||| ||||    
T  28485523 cacttattctcttattggatgaaattaatgtatgtcccaccactttaagtggaacccatttccaaagtgtgagacccacattaatttaaaccaatgag 28485426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 39023428 - 39023509
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctacca 257  Q
    ||||||| || |||||||||| ||| ||   ||||||||||||| | |  ||||||||||||||||||||||||||| ||||    
T  39023428 aggaatgttaacaacactcacgttttaacggtctctctagcactcatttatttattggatgaaatcaatgtatgtcccacca 39023509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 3099777 - 3099693
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    ||||||||| |||| ||||||||||||| | |||| |||||||| |||  |||| |||||| ||| | |||||| ||||||||||    
T  3099777 tcttttattagatggaatcaatgtatgttccaccattttgtgtgagttatatttccaaagtatagtctcacaataatttaaacca 3099693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 11574162 - 11574214
Alignment:
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||| ||| |||||||||||| ||||||||||| ||| ||||||||    
T  11574162 agagagtgagtgttaaagagagtgttcaaaagagagtgttcctaacattactc 11574214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 8671086 - 8671129
Alignment:
Q  315 agtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||    
T  8671086 agtgagtattagagagagcgttcaaaagagaatgttgctagcat 8671129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 34303465 - 34303504
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  34303465 ctctctagcactaactcttttattgggtgaaatcaatgta 34303504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 1206007 - 1205941
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| |||||||||  |||| || ||||||| ||||||| ||||||||||||  |||||||||||||    
T  1206007 tgcttgcaacactctattttgaacactctctttagcactcactcttttattgagtgaaatcaatgta 1205941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 5095882 - 5095829
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactctttt 228  Q
    |||||||| |||||||||| ||||||||| ||||| || | |||||||||||||    
T  5095882 gaggaatgttagcaacacttacttttcaacactctttcgaacacttactctttt 5095829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 6891566 - 6891525
Alignment:
Q  323 ttagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||||| |||| ||||||||| ||||||||||||    
T  6891566 ttagagagagtgttaataaaagagtgttgttagcattactct 6891525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 29011080 - 29011137
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttg 262  Q
    |||||||||| |||| | ||| ||| |||||||||  |||||||||||||||||||||    
T  29011080 actctctctaacactcattctcttaatggatgaaactaatgtatgtcctaccactttg 29011137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 286
Target Start/End: Original strand, 31711620 - 31711730
Alignment:
Q  175 gaggaatgctagcaa-cactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    ||||||||||| ||| ||||||||||| |||  ||| ||||||||| ||||||||||| |||| |||  ||| |||||  | ||||||||||| |||| |    
T  31711620 gaggaatgctatcaaacactcacttttaaat--tctttctagcactcactcttttatttgatggaattcatgcatgtctcatcactttgtgtgagttcta 31711717  T
Q  274 ttttcaaagtgta 286  Q
    |||  ||||||||    
T  31711718 tttctaaagtgta 31711730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 38091468 - 38091537
Alignment:
Q  295 atgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||| ||| | ||| ||||||| || ||||||||||| | |||||| ||||||||||||| ||||    
T  38091468 atgatttaagccaattagaaagtgagtgttggagagagtgttgaaaagagaatgttgctagcattcctct 38091537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 10543823 - 10543883
Alignment:
Q  96 tgggttcatgggcttaatctaggacctatcgattttgagctggatgtaaagagagtggttg 156  Q
    ||||| |||| ||| || ||||||||||| ||||||||| ||||||  |||||||||||||    
T  10543823 tgggtgcatgagctcaacctaggacctattgattttgagatggatgcgaagagagtggttg 10543883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 34303561 - 34303509
Alignment:
Q  235 tgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||||||||||||||  |||||| | ||||| ||| |||||||||||||||    
T  34303561 tgaaatcaatgtatgtctcaccactctatgtggcttcgattttcaaagtgtag 34303509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 175 - 353
Target Start/End: Complemental strand, 28490905 - 28490727
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| | ||| ||||||||||||||||||| |||||||| ||||||||||||  |||||||    
T  28490905 gaggaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaat 28490806  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgct 353  Q
    ||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  28490805 tttgaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgct 28490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 173 - 364
Target Start/End: Original strand, 34368355 - 34368546
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||||||||||||| | |||| || ||| |||||| |||| ||||||| ||||||| ||| |||||||||| | |||||||||||||||||||    
T  34368355 acgaggaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttca 34368454  T
Q  273 attttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     |||||||||||||||||||||||||||||||||| | |||||||| ||   |||||||||| ||| |||||||||||||||||||| ||||    
T  34368455 tttttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgctcaaaagagagtgttgctagcattcctct 34368546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 217 - 364
Target Start/End: Complemental strand, 41105711 - 41105564
Alignment:
Q  217 acttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagag 316  Q
    ||||||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||| | ||||||| |||||||||||| | ||||||    
T  41105711 acttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagag 41105612  T
Q  317 tgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  41105611 cgagtattagagagagtgctcaaaagagagtgttgctcgcattactct 41105564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 178 - 336
Target Start/End: Complemental strand, 10142154 - 10141998
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||||||| ||||||| ||||| |  |||||| ||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||    
T  10142154 gaatgctagcaacactcatttttcaacactctat--agcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccatttt 10142057  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    ||||||||||||| ||||| ||||||| || | ||||||||||| ||||||||||||||    
T  10142056 caaagtgtagaccaacaattatttaaatcaataagagagtgagtgttagagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 5413874 - 5413730
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | | | ||||||    
T  5413874 actcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtgag 5413775  T
Q  321 tatta---gagagagtgttcataagagagtgttgctagcattact 362  Q
    |||||    |||||||||||| |||||||||||||| ||||||||    
T  5413774 tattatagtagagagtgttcaaaagagagtgttgcttgcattact 5413730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 30326054 - 30325869
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||  |||||||| || | |||| || |     
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctc 30325955  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| || ||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  30325954 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtg-tgctagcactactct 30325869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 37455346 - 37455538
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| || | |||||||| |||| || ||||||||||||||  |||| |||||| ||| |||||||||||||| | |||| |||||| |||||||||    
T  37455346 gaggaatacttgtaacactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaat 37455445  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattaga----gagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||| |||||| | |||||||| | |||||||||||||||||    ||| ||||||| |||||||||||||||||||||||||    
T  37455446 tttcaaagtgtagactcacaat-aattaaaccaataagagagtgagtattagagagggagggtgttcaaaagagagtgttgctagcattactct 37455538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 17537285 - 17537124
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| || ||| ||||||||||||| |||||||||| |||| ||||||||||| ||| |||||||||||||||| |||| ||| ||| |||| |||    
T  17537285 gaggaatgataacaatactcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaat 17537186  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||||||||||| ||| |||||||||||||| | ||||||||| ||| ||||||| ||||    
T  17537185 tttcaaagtgtagatccataatgatttaaaccaataagagagtgaatataagagagattgtt 17537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 42224774 - 42224584
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||| ||||||||| ||    
T  42224774 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42224675  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    || ||||||||| | || ||| |||||| | ||| | | |||||||||  | ||||||||  ||| |||||||||||||||||||| ||||    
T  42224674 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctct 42224584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 351
Target Start/End: Complemental strand, 28223955 - 28223783
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||||||||||||||||| |||  || || |||||| |||||||||| ||||||| | ||||||| |  | | |||||||||| |||||||||    
T  28223955 aatgctagcaacactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttc 28223856  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttg 351  Q
    ||||| |||||||| |||||||||||||| | | ||||||||||||||||||  |||||| ||||| ||||||    
T  28223855 aaagtatagacccataatgatttaaaccaataaaagagtgagtattagagaggatgttcaaaagagggtgttg 28223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 362
Target Start/End: Complemental strand, 34384863 - 34384687
Alignment:
Q  186 gcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    ||||| ||||||||| |||||| ||| || |||| | ||||||||||| |||||||||||||||||| || | |||||||| |||||||||||||| | |    
T  34384863 gcaacgctcactttttaatactttctttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattat 34384764  T
Q  286 agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    |||| |||||||||||| |||  | | ||||||||||||| |||||||||||| ||||||||| | ||| |||||||    
T  34384763 agactcacaatgatttagaccgataaaagagtgagtattaaagagagtgttcaaaagagagtgctactaccattact 34384687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 28611961 - 28611772
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||||||||| |  |||||||||| || | ||||||| |||||||  || || ||||||||| | |||||||| || |||| ||    
T  28611961 gaggaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccat 28611862  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| ||||||||||| |||||||||||||| || | | |||||  || |||||||||||| ||| |||||||||||||||||||| ||||    
T  28611861 ttttaaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgctagcatttctct 28611772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 25710625 - 25710494
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||| || |||| ||||||||||||  |||||||||||||||||||||||||| || || |||| |||||||||||||||||||||||| |||||||    
T  25710625 actctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatttaaa 25710526  T
Q  305 ccactgagagagtgagtattagagagagtgtt 336  Q
    ||| | ||||| ||| ||||| ||||||||||    
T  25710525 ccaataagagaatgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 364
Target Start/End: Complemental strand, 28434969 - 28434816
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||| |||| | ||||||||||||| |||||||| ||||||| ||||||  |||| ||||||||||||||||| ||||||||||||||||||||    
T  28434969 actctctctaacactaattcttttattggataaaatcaatatatgtcccaccact--gtgttggttcaattttcaaagtttagacccacaatgatttaaa 28434872  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| | ||| | ||||||||||||||    || | |||||| ||||||||||||||||||    
T  28434871 ccaataagaaaatgagtattagagag----tttaaaagagaatgttgctagcattactct 28434816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 221 - 363
Target Start/End: Complemental strand, 41330530 - 41330390
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||||||| |||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| |   ||    
T  41330530 actcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaatgtag 41330431  T
Q  321 tattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||| |||| ||||||  || |||||||||||||||||||||    
T  41330430 tattaaagagtgtgttc--aaaagagtgttgctagcattactc 41330390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 27592632 - 27592446
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||| |||| ||||||| |||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||  |||||||| || | |||| ||||     
T  27592632 gaattctagtaacactcgcttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttc 27592533  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| |  ||||||||||||||| | |||||||| |||   |||||||| |||| |||||||||||| ||||| ||||||    
T  27592532 caaagtgtagatctgcaatgatttaaaccaataagagagtgggtacaggagagagtattcaaaagagagtgttgatagcactactct 27592446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 320
Target Start/End: Original strand, 39246605 - 39246750
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||| |||||||| |  |  ||||||| || | ||| | ||||||||| |||||||||||||||| ||||||||||||| ||||| |    
T  39246605 gaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagt 39246704  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||||||||||||||||||  ||||||||| | ||||||||||    
T  39246705 tttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 179 - 364
Target Start/End: Complemental strand, 1923731 - 1923546
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||| ||||||| |||||||||||||||||  ||| ||||| || ||||||| |||| ||  ||||||||||  ||||||||||||| ||||||||||     
T  1923731 aatgccagcaacattcacttttcaatactctacctaccactttcttttttattagatgcaaagaatgtatgtcacaccactttgtgtgagttcaattttt 1923632  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||    |||||||||||||||| | ||| | |||||||||||||   |||||| || ||||||||| || |||||||||    
T  1923631 aaagtgtagttttacaatgatttaaaccaataagataatgagtattagagatgatgttcaaaaaagagtgttgttaccattactct 1923546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 357
Target Start/End: Complemental strand, 40971636 - 40971453
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||| ||||| |  ||||||||||||||| ||||||||||||  |||||||||||||||||| |||||||| |||  |||  ||    
T  40971636 gaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttcat 40971537  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    || ||||||||| | |  ||| |||||| | ||| | | | ||||||| ||||| |||||||||| ||||||||||||||||||    
T  40971536 ttccaaagtgtaggtcttacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagca 40971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 43405390 - 43405551
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||  || ||||| |||| || || |||| |  |||| |||||||||||| ||||||||||||||||||  |||||||||| |  |||| ||    
T  43405390 gaggaatgctaataatactcaatttttaacacgctctttgtcactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctat 43405489  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    || ||||||||||||||||||||||||||| || | ||||||||| ||| |||| |||||||    
T  43405490 ttccaaagtgtagacccacaatgatttaaatcaataagagagtgaatatcagagggagtgtt 43405551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 336
Target Start/End: Complemental strand, 28090407 - 28090251
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||| |||||||||| | ||||||| ||||||| |  |||||||| || ||||  |||||||||||  |||||| ||||||||||||| ||||||||||    
T  28090407 gaatgttagcaacacttatttttcaacactctctat--cacttactattatattatatgaaatcaattcatgtcccaccactttgtgtgagttcaatttt 28090310  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||| |||| | |||||||||||||||| | | ||||||| ||||| | ||||||||    
T  28090309 caaagtttagatcaacaatgatttaaaccaataaaagagtgaatattacatagagtgtt 28090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 25630808 - 25630936
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||||| ||| ||||||||| ||||||| || || ||||| |||||||  || |||| ||||||| ||| || | ||||| | ||||||||||||    
T  25630808 aatgctagcaatacttacttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttc 25630907  T
Q  279 aaagtgtagacccacaatgatttaaacca 307  Q
    ||||||||||||||| |||||||||||||    
T  25630908 aaagtgtagacccacgatgatttaaacca 25630936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 330
Target Start/End: Original strand, 10950083 - 10950238
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |  |||| | ||| ||| ||||||| |  |||||||||||| |||| ||||||||||||||||||| |||| ||||| ||| ||| ||    
T  10950083 gaggaatgctaaccgcacttattttccaacactctctttctcacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctat 10950182  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagag 330  Q
    ||||||||| ||||| || |||||||||||| | | ||||| ||| ||||||||||    
T  10950183 tttcaaagtatagactcataatgatttaaactaataagagaatgaatattagagag 10950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 14553573 - 14553665
Alignment:
Q  239 atcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagaga 331  Q
    ||||||||||||||||||| |||  || ||||||||||| |||||||||||||||||| | ||||||||   |||||||||||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 364
Target Start/End: Complemental strand, 36338023 - 36337881
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagaga---gtgagt 321  Q
    ||||||| |||||||| ||||||||||| |  | |||||||  ||||||||| |||||||||||||||||||||||||||||| | | | |     | ||    
T  36338023 ttttatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatttaaaccaataaaaaaaataagtgt 36337924  T
Q  322 attagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||    
T  36337923 attagagagagtgttcaaaagatagtgttgatagcattactct 36337881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 364
Target Start/End: Original strand, 4714796 - 4714935
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||||||| |||| | ||| ||||| | || ||||||||||||| ||||||||| ||||||  |||||||||||| |||| | | ||||    ||||    
T  4714796 ttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttataccaataaaagagaacatatt 4714895  T
Q  325 agagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| |||||| |||||||||||||||||| ||||||    
T  4714896 agagagaatgttcaaaagagagtgttgctagcactactct 4714935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 28155881 - 28155769
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||| |||| ||||||||  |||| |||||| |||  ||||||||||||||||||| ||||||||||||||||| | |||| ||| | |||||| |||    
T  28155881 gaggaaggctaacaacactctttttttaatactttct--agcacttactcttttattgaatgaaatcaatgtatgttcaaccattttttatgggtttaat 28155784  T
Q  275 tttcaaagtgtagac 289  Q
    |||||||||||||||    
T  28155783 tttcaaagtgtagac 28155769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 25919266 - 25919340
Alignment:
Q  233 gatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||| ||||||  |||| |||||||||| |||||||||||||||||||| |||||||||||||||||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaacca 25919340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 4959275 - 4959387
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| |  ||||||||||  ||  ||||||||||||| |||||||||||||||||  | || ||| ||||||||  ||    
T  4959275 gaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttacat 4959374  T
Q  275 tttcaaagtgtag 287  Q
    |||||||||||||    
T  4959375 tttcaaagtgtag 4959387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 362
Target Start/End: Original strand, 32401114 - 32401302
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||| |  |||||||  ||||||| |||||||| | |||||||||| ||||||  |||||| ||||||| | | |||||||| ||||||||| ||    
T  32401114 gaggaatgcaaataacactctattttcaacactctctcaaacacttactctcttattgagtgaaattaatgtatattccaccactttatgtgggttccat 32401213  T
Q  275 tttcaaagtgtag-acccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattact 362  Q
    ||| |||  |||| | ||||| | ||||||  ||   | |||||||||||||||||||||||||| ||||  |||||||||||| ||||    
T  32401214 tttaaaaacgtaggatccacattaatttaagtcaactaaagagtgagtattagagagagtgttcaaaagaaggtgttgctagcactact 32401302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 32309475 - 32309562
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactt 260  Q
    ||||||||||||||  |||||| |||||||| | ||||||||||||| ||||| ||||||||| |||| ||||||||||| |||||||    
T  32309475 acgaggaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 359
Target Start/End: Complemental strand, 17435019 - 17434849
Alignment:
Q  186 gcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    |||||||| ||||||||| ||||||| ||  ||| |||  |||||||||| |||  ||| ||||| |||| | ||||| || |||| ||||  |||||||    
T  17435019 gcaacacttacttttcaacactctctttattactcact--tttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgt 17434922  T
Q  286 agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||| |||||||||||| | | |||||||  |||||||||| |||| | ||||||||||||||| ||||    
T  17434921 agacccacattgatttaaaccaataaaagagtgaacattagagaga-tgtttaaaagagagtgttgctaacatt 17434849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 364
Target Start/End: Complemental strand, 10666819 - 10666682
Alignment:
Q  227 ttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattag 326  Q
    ||||| ||| |||||| ||||| |||||||||||| ||||||||| ||||| ||| ||||||| |||| | |||||||||| | ||||||||| | |||     
T  10666819 ttattagataaaatcattgtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtgaatgttaa 10666720  T
Q  327 agagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| || | || ||||||| |||| || ||||||    
T  10666719 agagagtcttaaaaaaagagtgtagctatcactactct 10666682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 12076133 - 12076056
Alignment:
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| |||||||| ||| | ||||||||||||||||| | |||||||| |||||||||||||||||| ||||||    
T  12076133 gacccacattgatttaagccaattagagagtgagtattagataaagtgttcaaaagagagtgttgctagcactactct 12076056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 31885963 - 31885882
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||||| ||||| |||||| |||| ||| ||  |||||||||||||||||||||| | ||||||||||||||||    
T  31885963 tttattggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaacca 31885882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 359
Target Start/End: Complemental strand, 17568856 - 17568700
Alignment:
Q  204 tactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgattta 302  Q
    ||||||| |||||||| ||||||||||||  |||||||||| ||||||| ||||||||  || ||||| |||| ||||||||| | || ||| | ||||     
T  17568856 tactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttc 17568757  T
Q  303 aaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    | ||| | | |||||| ||  ||| ||||||| ||| ||||||||||||||||||||    
T  17568756 atccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 17568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 42224585 - 42224657
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  |||||||| |||||| ||||||||||||| |||||||||||||    
T  42224585 gaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgta 42224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 13456315 - 13456236
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||||  ||| |||||||||| ||||||||||||||||| ||| |||| ||| ||||||||| |||||||||||||||    
T  13456315 ctctctattactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattttcaaagtgtag 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 359
Target Start/End: Original strand, 32050334 - 32050489
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag-acccacaatgatttaa 303  Q
    ||||||||||||| | | ||||||||||| |||||| ||| ||||||  | |||||| ||||||||| ||||||||||||| | ||  ||| |||||| |    
T  32050334 actctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaagtgtggaacatacattgatttca 32050433  T
Q  304 accactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
     ||| | | | |||||||  |||||||| || ||| ||||||||||||||||||||    
T  32050434 cccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcatt 32050489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 17568695 - 17568768
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||||||||||||| ||||| |  |||||| |||||||  |||||||||||||||||||| ||||||    
T  17568695 cgaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 17568768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 43541871 - 43541956
Alignment:
Q  198 tttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagt 283  Q
    |||||| ||||||| ||  |||| ||||||||||| || |||||||||||||||  | ||||||||||| ||||||||||||||||    
T  43541871 tttcaacactctctttaatacttcctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaagt 43541956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 24915099 - 24915163
Alignment:
Q  222 ctcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    |||||||||| | |||||||||| ||||||| |||||||| ||||||||| ||||||||||||||    
T  24915099 ctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgta 24915163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 24990930 - 24990994
Alignment:
Q  222 ctcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||| ||||| ||||||||||||||    
T  24990930 ctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgta 24990994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 32050490 - 32050418
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgt 250  Q
    ||||||||||||||||| ||||| |  | ||||||||||||| ||| ||||||||| ||||||||||||||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgt 32050418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 357
Target Start/End: Original strand, 6263881 - 6264061
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    ||||||| ||| ||||||| ||||| |  |||||||||| |||| |||| |||||||| | |||||||| ||||||| |||||||| ||  ||||| | |    
T  6263881 aggaatgttagtaacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccactttatg--ggttccagt 6263978  T
Q  276 ttcaaagtgtagaccc-acaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    | |||||||| || |  ||| |||||| | ||||| | |||||||||  |||| |||||| | | ||||||||||||||||||    
T  6263979 tccaaagtgttgatcttacattgatttcacccactaaaagagtgagtgctagatagagtgcttaaaagagagtgttgctagca 6264061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 359
Target Start/End: Original strand, 26072106 - 26072285
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaa 280  Q
    ||||| |||||||| ||||| |  ||||| ||||  ||| | |||||| |||| |||||||||||||||||  |||||||| |||||  |  |||| |||    
T  26072106 tgctaacaacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgtatgtctcaccactttatgtggaattcatttccaa 26072205  T
Q  281 agtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||| | |||||| || ||| | ||| | | |||||||||  |||||||| || ||| ||||||||||||||||||||    
T  26072206 agtgtaggtcccacattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcatt 26072285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 26072289 - 26072218
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgt 246  Q
    |||||||||||||||||||| ||||| |  | ||||||||||||| ||||||||||||| ||||| ||||||    
T  26072289 gaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 1649547 - 1649633
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    |||||||| |||  |||||| |||||||| |||||||||| |||| ||| | |||||||||||||| ||||||||  ||||||||||    
T  1649547 gaggaatgttagggacactctcttttcaacactctctctaacactcactatcttattggatgaaattaatgtatgctctaccacttt 1649633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 4959464 - 4959391
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat 248  Q
    ||||| |||||| ||||||| ||||| |  ||||||||||||||| |||||||||||||  |||||||||||||    
T  4959464 gaggagtgctagtaacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 17700166 - 17700256
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgt 265  Q
    ||||||||| |||||||||||||||||| |||||||| |  | | || |||||||||||||||| || ||||||||  || ||||||||||||    
T  17700166 acgaggaatactagcaacactcacttttgaatactctat--acccctcactcttttattggatggaaccaatgtataccccaccactttgtgt 17700256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 6264067 - 6263995
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||| |||||||||||||| ||||| |  ||||| ||||||||| ||||||||| ||| |||||||||||||    
T  6264067 gaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgta 6263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 10253232 - 10253164
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattt 276  Q
    ||||||| |||| |||||| ||||||||||||| ||||||||||| |||||||| |||| |||| ||||    
T  10253232 ctctctaacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctattt 10253164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 4959325 - 4959274
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||| ||||    
T  4959325 agagtgggtattagagagagtgctcaaaagagagtgttgctagcattcctct 4959274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 8912511 - 8912618
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||| ||| ||||| || ||| | ||||||||| ||||||||||| | | |||| ||| |||||||  ||||||| ||||||||  |||| |    
T  8912511 aatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaattaatatatgtccctccactttctgtgggtttcatttcc 8912610  T
Q  279 aaagtgta 286  Q
    ||||||||    
T  8912611 aaagtgta 8912618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 25564080 - 25564033
Alignment:
Q  224 cttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttc 271  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  25564080 cttttattggatgaaataaatgtatgttccaccactttgtgtgggttc 25564033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 2525583 - 2525721
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    ||||||||| |||| || ||||||| || ||||   | |||||||||||||||||||||||| |   |||||||||||||  |||  |||||||||||||    
T  2525583 caacactcattttttaacactctctttaacactcgtttttttattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgta 2525682  T
Q  287 gacccacaatgatttaaaccactgagagagtgagtatta 325  Q
     |  || |||||||||||  | | ||||||||| |||||    
T  2525683 aatacataatgatttaaattaataagagagtgaatatta 2525721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 34480079 - 34480005
Alignment:
Q  230 ttggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||||||||||| ||| ||  |||| ||||||||  ||||||||| |||||| ||||||||||| |||||||    
T  34480079 ttggatgaaatcaatatatatctcaccattttgtgtgaattcaatttttaaagtgcagacccacaataatttaaa 34480005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 40971445 - 40971519
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||| |||||||||||||| ||||| || ||||| |||| |||| ||| ||||||||| | |||||||||||    
T  40971445 acgaggagtgctagcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgta 40971519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 5465725 - 5465656
Alignment:
Q  285 tagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    |||||||| |||||||||||||| | ||||||||| ||||||| | ||||||||   |||||||||||||    
T  5465725 tagacccataatgatttaaaccaataagagagtgaatattagaaaaagtgttcaatggagagtgttgcta 5465656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 24915239 - 24915169
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||| |||||||||||| |||||  |  | |||||||||||| ||||||||||||| |||||||||||||    
T  24915239 gaggaatactagcaacactctctttt--aagcactctctagcactcactcttttattgggtgaaatcaatgta 24915169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 24991070 - 24991000
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||| |||||||||||| |||||  |  | |||||||||||| ||||||||||||| |||||||||||||    
T  24991070 gaggaatactagcaacactctctttt--aagcactctctagcactcactcttttattgggtgaaatcaatgta 24991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 25002091 - 25002014
Alignment:
Q  273 attttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgt 349  Q
    |||| |||||||| |||||||| ||||||||||||| | ||| ||||||| || ||||||||||| | ||||||||||    
T  25002091 atttccaaagtgtgagacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttgaaaagagagtgt 25002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 13456170 - 13456239
Alignment:
Q  184 tagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctac 255  Q
    ||||||||||| ||||| | ||||||  |||||||| ||||||||||| | ||||||||||||| |||||||    
T  13456170 tagcaacactctcttttgagtactct--ctagcactcactcttttattaggtgaaatcaatgtaggtcctac 13456239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 42224724 - 42224770
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  42224724 agagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 42224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 305
Target Start/End: Original strand, 4427336 - 4427369
Alignment:
Q  272 aattttcaaagtgtagacccacaatgatttaaac 305  Q
    |||||||||||||||||| |||||||||||||||    
T  4427336 aattttcaaagtgtagactcacaatgatttaaac 4427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 355
Target Start/End: Complemental strand, 4877898 - 4877752
Alignment:
Q  213 tagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgag 312  Q
    ||||||||| | ||||||||||||||||||||||| |||  | || |||  |||| || ||||||||| || || || |||  ||||||||| || | ||    
T  4877898 tagcacttatttttttattggatgaaatcaatgtacgtctcatcattttacgtggttttaattttcaacgtataaactcacgttgatttaaatcaataag 4877799  T
Q  313 agagtgagtattagagag----agtgttcataagagagtgttgctag 355  Q
    ||||||| | ||||| ||    ||| |||| ||||||||||||||||    
T  4877798 agagtgatttttagaaagaataagtattcaaaagagagtgttgctag 4877752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 10300052 - 10300088
Alignment:
Q  327 agagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||| | ||||||||||||||||||||||||    
T  10300052 agagagtgttgaaaagagagtgttgctagcattactc 10300088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 175 - 360
Target Start/End: Complemental strand, 6133807 - 6133623
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||||| ||||||| ||||  |||||||||||||||    
T  6133807 gaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaat 6133708  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatta 360  Q
    ||||||||| || ||||||||||| |||||||| | ||||||||||||||||||||  |||||| ||||||||||||||| |||||    
T  6133707 tttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtattagagaggatgttcaaaagagagtgttgctaacatta 6133623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 179 - 363
Target Start/End: Complemental strand, 10659948 - 10659764
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactctttt-attggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||| |||| || |||||||||||||| |||||| |||||||||||| |||||||||||    
T  10659948 aatgttagcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaatttt 10659849  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||| |||| | |||||||||||||||||    
T  10659848 caaagtgtagacccacgatgatttaaaccaataagagagtg-gtattagagaaagtgttcaaaagaaaatgttgctagcattactc 10659764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 173 - 358
Target Start/End: Complemental strand, 26980447 - 26980262
Alignment:
Q  173 acgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||||| ||||||||||||||||| ||||||||||  ||| ||||| |||||||||||||||||||||||||| |||| |||||||| |||||    
T  26980447 acgaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttca 26980348  T
Q  273 attttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    ||||||||| | || | ||||||||||||||| || | ||||||||||||||| |||||||||| | |||||||||||||||||||    
T  26980347 attttcaaaatatacatccacaatgatttaaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttgctagcat 26980262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 11987623 - 11987811
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| ||| ||||||||||||||||| |||||||| | || ||| || ||||||||||||||| ||||||||| | ||||||| ||| |||||||||    
T  11987623 gaggaatactaacaacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaat 11987722  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||||||||||||||||||||| | ||||||||  ||||||| |||||||| | ||||||||||||||||||||||||    
T  11987723 tttcaaagtgtagacccacaatgatttaaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttgctagcattactc 11987811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 8899015 - 8899199
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||| |||||||||||||||||||| | || ||||| ||||| || ||| ||| |||||||| || |||||||| ||| |||||||||||||||||||||    
T  8899015 aatgttagcaacactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttc 8899114  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||||  ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  8899115 aaagtgtaggtccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttgctagcattactc 8899199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 41958082 - 41958241
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||| |||||||||||||||| ||||||   |||||| |||| ||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  41958082 gaggaatgctagtaacactcacttttcaacactctca--agcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaat 41958179  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||    
T  41958180 tttcaaagtgtagacccacagtgatttaaaccaataagagagtgagtattagaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 19101781 - 19101595
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||| || | |||| |||||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttt 19101682  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| |  ||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  19101681 caaagtgtagatctgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtagtgctagcactactct 19101595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 28218231 - 28218040
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||| | |||||||||||| |||||||  |||||| ||||| | |||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  28218231 gaggaaggttagcaacactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaat 28218132  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattaga--gagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||||| ||||| | |||||||  | | ||| |||||||||||||  | ||||||||| |||||||||||||||||||||||||    
T  28218131 tttcaaagtgtagaaccacagtaatttaaattaataagatagtgagtattagagcgggagtgttcaaaagagagtgttgctagcattactct 28218040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 2225223 - 2225409
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||| |||||||| ||||||| |||||  |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||  |    
T  2225223 gaggaatgctagtaacactcaattttcaacactct--ctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggt 2225320  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    || ||||||||||||| ||| |||||||||||| | ||| ||||||||| | | || ||||||| ||||||||||| ||||| ||||||    
T  2225321 ttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgagtatcacaaagcgtgttcaaaagagagtgttactagccttactc 2225409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 8741405 - 8741217
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctct--agcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 275  Q
    |||||||||||||||||||||||||| |||||||||  ||   | ||| |||||||||||||||||||||||||||  || | |||||||||||||||||    
T  8741405 gaatgctagcaacactcacttttcaaaactctctctttagtggtcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaatt 8741306  T
Q  276 ttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| || || ||||||||||||||| | | ||||||||||||||||||| | |||||| |||||||||||||||| || |||||    
T  8741305 ttcaaagtataaacacacaatgatttaaactaataagagagtgagtattagagaaattgttcaaaagagagtgttgctagtataactct 8741217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 350
Target Start/End: Original strand, 25543337 - 25543511
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||| || |  ||    
T  25543337 gaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgtagg-tatat 25543435  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgtt 350  Q
    |  ||| ||| || | ||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||    
T  25543436 tcccaatgtgcagcctcacaatgatttaaaccaataagatagtgagtattagagagagtgttcaaaagagagtgtt 25543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 221 - 364
Target Start/End: Complemental strand, 30679048 - 30678905
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||    
T  30679048 actctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtgag 30678949  T
Q  321 tattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    | |||||||||||| ||| || ||||||||||||||||| ||||    
T  30678948 tgttagagagagtgctcaaaaaagagtgttgctagcattcctct 30678905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 221 - 364
Target Start/End: Complemental strand, 41948283 - 41948140
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgag 320  Q
    ||||||||||||||| |||||||||||| | |||||||||||||| |||||||||||||||||||| | ||||||||||||||| || | ||||||||||    
T  41948283 actcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagagtgag 41948184  T
Q  321 tattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    | |||||||||||||||| |||||| | ||||||||||| ||||    
T  41948183 tgttagagagagtgttcaaaagagaatattgctagcattgctct 41948140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 205 - 354
Target Start/End: Complemental strand, 32211937 - 32211788
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||||| || |||||||||| |||||||||| || |||||||||||||||||||||||    
T  32211937 actctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaa 32211838  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgcta 354  Q
    ||| | |||||||||  |||| ||| |||||| | |||||||||||||||    
T  32211837 ccaataagagagtgatcattaaagaaagtgttgaaaagagagtgttgcta 32211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 226 - 348
Target Start/End: Original strand, 33193098 - 33193219
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatta 325  Q
    ||||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  33193098 tttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtatta 33193197  T
Q  326 gagagagtgttcataagagagtg 348  Q
    |||| |||||||| |||||||||    
T  33193198 gagaaagtgttca-aagagagtg 33193219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 931371 - 931560
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||||||||||||  || ||||||  ||| |||||||||||| ||| || |||||||||||| | || ||| ||||||||||||    
T  931371 gaggaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaat 931470  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| | || |||||||||||||||||||| | | ||||||| ||||||| | |||||| | |  ||||||||||||||||| ||||    
T  931471 tttcaaaatatacacccacaatgatttaaaccaataaaagagtgaatattagaaaaagtgttaaaagaagagtgttgctagcattcctct 931560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 22540368 - 22540550
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||| || | |||| ||||     
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 22540467  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||||| || ||||||||||||||| |     ||| ||||||| |||||||||||| ||||||||| |||||||| ||||||    
T  22540468 caaagtgtagatccgcaatgatttaaaccaat----aagttagtattaaagagagtgttcaaaagagagtggtgctagcactactct 22540550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 358
Target Start/End: Original strand, 11135736 - 11135920
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  11135736 gaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11135835  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    || ||||||||| | || ||| |||||| | ||| | | |||||||||  ||||||||||  ||| |||||||||||||||||||    
T  11135836 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcat 11135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 3872813 - 3872685
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||  || |||||||| ||||||  |||||||||||| ||||||||||     
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttc 3872715  T
Q  278 caaagtgtagacccacaatgatttaaacca 307  Q
    ||||||||||||||||||||||| ||||||    
T  3872714 caaagtgtagacccacaatgattcaaacca 3872685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 44271915 - 44272076
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||  ||||||| || ||||||| ||||||||||| |||||||| ||||||||||||||||| | |||| ||| ||| ||||||||    
T  44271915 gaggaatgctagcaacatccacttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaat 44272014  T
Q  275 tttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgtt 336  Q
    |||||||||||||| | ||||||||||||| || | | | | ||||||||||| ||||||||    
T  44272015 tttcaaagtgtagaacaacaatgatttaaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 357
Target Start/End: Complemental strand, 32848766 - 32848583
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||| ||||| || ||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||| ||||| ||| ||    
T  32848766 gaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccat 32848667  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||||||||||| | || ||| ||| || ||||| | | ||||| |||  |||||| |||| ||| ||||||||||||||||||    
T  32848666 tttcaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagca 32848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 11430438 - 11430627
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||| |||||||| ||||| |  ||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  11430438 gaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11430537  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    || ||||||||| | || ||| ||| ||  |||| | | |||||||||  ||||||||||| ||| |||||||||||||||||||| ||||    
T  11430538 ttccaaagtgtaggtcctacattgaatt-caccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctct 11430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 364
Target Start/End: Complemental strand, 13114849 - 13114663
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||| |||||| |||||  | |||||||||| |||| ||||||||||| ||| |||||||| ||||||| |||||||| | ||| ||| |||| |    
T  13114849 aatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttcc 13114750  T
Q  279 aaagtgtaga-cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||| |||| | |||||| |||||||| ||| ||||| ||||||| ||||||||||||| || |||||||||||||||||| ||||||    
T  13114749 aaaatgtataacccacattgatttaacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttgctagcactactct 13114663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 364
Target Start/End: Complemental strand, 41095788 - 41095602
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||| |||||||| |||||||||||||||||| | |||| ||||||||||| ||||||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttc 41095689  T
Q  279 aaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||| | || ||| |||||| | ||| | |   |||||||  ||||||||||| ||| |||||||||||||||||||| ||||    
T  41095688 aaagtgtaggtcctacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctct 41095602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 15523210 - 15523392
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||| ||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||| || | |||| ||||     
T  15523210 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 15523309  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     |||||||||| || ||||||||||||||| |     ||| |||||||||||||||||||| ||||||||  |||||||| ||||||    
T  15523310 taaagtgtagatccgcaatgatttaaaccaat----aagttagtattagagagagtgttcaaaagagagtagtgctagcactactct 15523392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 15531204 - 15531386
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||| ||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||| || | |||| ||||     
T  15531204 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 15531303  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     |||||||||| || ||||||||||||||| |     ||| |||||||||||||||||||| ||||||||  |||||||| ||||||    
T  15531304 taaagtgtagatccgcaatgatttaaaccaat----aagttagtattagagagagtgttcaaaagagagtagtgctagcactactct 15531386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 35336868 - 35337023
Alignment:
Q  180 atgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttca 279  Q
    |||||||||||||||||||||||| | || |||||||||| | | |||||||||||||||||||||| |     |||||||||||||||||||||||||     
T  35336868 atgctagcaacactcacttttcaaca-tc-ctctagcactcattattttattggatgaaatcaatgtctc----accactttgtgtgggttcaattttct 35336961  T
Q  280 aagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataa 341  Q
     | ||||||| ||||||||||||||||| | |||||  ||||||||||||||||||| ||||    
T  35336962 taatgtagacacacaatgatttaaaccaataagagaacgagtattagagagagtgttgataa 35337023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 37553102 - 37552962
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||||||||||||||| | |||||||||||||| ||||| ||||| | ||||||  |||||||  |||||||||||||||| |||||||||||||||    
T  37553102 actctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaatgatttaaa 37553003  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagt 347  Q
     || | ||||||||||||||  | |||||||||| ||||||||    
T  37553002 tcaataagagagtgagtatt--aaagagtgttcaaaagagagt 37552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 178 - 355
Target Start/End: Complemental strand, 33060072 - 33059896
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    |||||||||||| ||||||||||| ||||  ||| || || | |||||||||||||||||||| || | |||||| |||||| | |||||||| ||||||    
T  33060072 gaatgctagcaatactcacttttctatacattctttaacagtcactcttttattggatgaaattaaagcatgtcc-accactctctgtgggtttaatttt 33059974  T
Q  278 caaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
     |||||||| || ||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||||| |||||||    
T  33059973 taaagtgtacactcacaatgttttaaaccaataagagagtgggtactagaaaaagtgttcaaaagagagtattgctag 33059896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 41917995 - 41918104
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatttt 277  Q
    ||||||||||||||||| ||||| |  || |||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||| ||| |||||    
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccatttt 41918094  T
Q  278 caaagtgtag 287  Q
    ||||||||||    
T  41918095 caaagtgtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 359
Target Start/End: Original strand, 27570234 - 27570406
Alignment:
Q  187 caacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 286  Q
    ||||| |||||||| || |||||||||  |||| | ||||||||||| |||||| ||  ||||||| |||| |||||||| ||| |||||| ||||||||    
T  27570234 caacagtcactttttaacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgta 27570333  T
Q  287 gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
     |||||||||||||| ||| | | ||| ||||| | | |||||||||||||| |||||| |||||||||||||    
T  27570334 aacccacaatgatttgaactaataagaaagtgaatttgagagagagtgttcaaaagagaatgttgctagcatt 27570406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 49730861 - 49730993
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||  |||||| |||| | ||||| ||||||| || |||| ||||||||||| ||| |||  ||| ||||||  || ||||||||||||||||||    
T  49730861 gaggaatgacagcaacgctcattcttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaat 49730960  T
Q  275 tttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||||||||||||||||||||||||    
T  49730961 tttcaaagtgtagacccacaatgatttaaacca 49730993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 205 - 363
Target Start/End: Original strand, 15928582 - 15928738
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||||||||||  ||||||||||| |||| |||  |||||||||  |||| |||||||| |||| |||||||| ||||||||  ||| |||||||||    
T  15928582 actctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaa 15928681  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||| | | ||||||||||||  |||||||||||| |||||||||||| ||||| |||||    
T  15928682 ccaataaaagagtgagtatt--agagagtgttcaaaagagagtgttggtagcactactc 15928738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 29673502 - 29673633
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||| |||| | | ||||||||||| |||||||| ||||||| |||| ||||||| | |||||||||||||||||||| | ||||| |||||||    
T  29673502 actctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaa 29673601  T
Q  305 ccactgagagagtgagtattagagagagtgtt 336  Q
    ||| | | | ||||||||||||||||||||||    
T  29673602 ccaataaaaaagtgagtattagagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 359
Target Start/End: Complemental strand, 14094184 - 14093999
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||||||||| ||| |  ||||| || |||||||| |||||| ||| ||||||||| |||||||||||||||||| |||||||| ||||||||| ||    
T  14094184 gaggaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 14094085  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    || ||||||||| | || ||| |||||| |  || | | | ||||||| ||| | |||||||||| ||||||||||||||| ||||    
T  14094084 ttccaaagtgtaggtcctacattgatttcactcaatcaaaaagtgagtgttacaaagagtgttcaaaagagagtgttgctaacatt 14093999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 363
Target Start/End: Original strand, 39019572 - 39019752
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||||||||| |||||||| |||||||| | ||||       ||||||| |||||||||||||||||| ||||||    |||||||  ||    
T  39019572 gaggaatgctagcaacactctcttttcaacactctctcaaacactc------ttattgggtgaaatcaatgtatgtcccaccact----gtgggtttcat 39019661  T
Q  275 tttcaaagtgtag-acccacaatgatttaaaccactg-agagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    |||||||  |||| ||||||| ||||| || ||| |  ||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  39019662 tttcaaaacgtaggacccacattgattgaagccaatttagagagtgagtattagagaaagtgttcaaaagagagtgttgctagcactactc 39019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 46335092 - 46335223
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactctt---ttattggatgaaatcaatgtatgtcctaccactttgtgtgggttca 272  Q
    ||||||||||||||  ||||||||| || ||||| ||||||||| ||||||   |||||||||||||||||| ||| ||||||||||||||  | |||      
T  46335092 aggaatgctagcaaacctcacttttgaacactctttctagcactcactcttcttttattggatgaaatcaatctatatcctaccactttgtcagagttat 46335191  T
Q  273 attttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||| || ||||||||||||||||||||    
T  46335192 attttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 326
Target Start/End: Original strand, 31074717 - 31074863
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||| |||||||||  ||| || |||||| ||| || ||||||||||||| ||||||||||||  |||||||| |||||| ||| | ||| ||||||    
T  31074717 aatgctatcaacactcatgtttgaacactctccctaacatttactcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttc 31074816  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattag 326  Q
    ||| |||||||||||||||| ||| |||| | |||||||| |||||||    
T  31074817 aaaatgtagacccacaatga-ttagaccaataagagagtgggtattag 31074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 50539162 - 50539251
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaac 305  Q
    |||| ||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||  ||||||||| | |||||||||||||    
T  50539162 cactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaac 50539251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 13388331 - 13388403
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||| ||| |||||||||||||||||||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 44739115 - 44739227
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||||||||||| ||||| || ||||||||||||||| |||||||| |||  |||||| ||||||||||| |||||||| |||| |||  ||    
T  44739115 gaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgtat 44739214  T
Q  275 tttcaaagtgtag 287  Q
    || ||||||||||    
T  44739215 ttccaaagtgtag 44739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 39039537 - 39039470
Alignment:
Q  176 aggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaa 243  Q
    |||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||||    
T  39039537 aggaatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 39974326 - 39974194
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatta 325  Q
    |||||| ||||||||||||| |||| | |||| ||||| |||||||||      ||||| |||   |||||||||||||||| | |||||||||||||||    
T  39974326 tttattagatgaaatcaatggatgttccaccattttgtatgggttcaa------aagtgcagatttacaatgatttaaaccaataagagagtgagtatta 39974233  T
Q  326 gagagagtgttcataagagagtgttgctagcattactct 364  Q
    || ||| |||||| |||||||||||| ||||||||||||    
T  39974232 gaaagaatgttcaaaagagagtgttgttagcattactct 39974194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 346
Target Start/End: Original strand, 15468258 - 15468388
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagaga 315  Q
    |||| |||||||||||  ||  ||||||||||||||  |  ||||||||||||||||||||||| |||||||||||||||| |||||||  | | | |||    
T  15468258 cactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaaga 15468357  T
Q  316 gtgagtattagagagagtgttcataagagag 346  Q
    || |||||| |||| |||||||| |||||||    
T  15468358 gtaagtatttgagatagtgttcaaaagagag 15468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 364
Target Start/End: Complemental strand, 50773294 - 50773104
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||| ||| |||||||||||  |||| | | ||||||||| |||| ||||||||||||||| |||||||| ||||| | |||||||| ||||||||| ||    
T  50773294 gagggatgttagcaacactctattttgactgctctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgggttccat 50773195  T
Q  275 tttcaaagtgta-gacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    || |||| | || | || ||| | |||| | ||| | | ||| |||||  ||||||||||||||| |||||||| ||||||||||| ||||    
T  50773194 ttccaaaatataggtcctacattaattttacccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatttctct 50773104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 358
Target Start/End: Original strand, 51732290 - 51732456
Alignment:
Q  189 acactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga 288  Q
    |||||||||||||||  | ||||||| || | ||| ||||||| |||||||| ||||||| | | || ||||| |||| ||| |||||||||||| || |    
T  51732290 acactcacttttcaa--cgctctctaacattcacttttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaa 51732387  T
Q  289 cccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    |||||||| |||||||||| | | ||||||||||||||||| |  ||||| || | ||||||||||||||    
T  51732388 cccacaataatttaaaccaataaaagagtgagtattagagaaaacgttca-aaaaaagtgttgctagcat 51732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 359
Target Start/End: Complemental strand, 13388483 - 13388335
Alignment:
Q  214 agcacttactcttttattggatgaaatcaatgtatgtcctaccactt--tgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactg 310  Q
    |||||| ||||||||||||| |||||||||||||||||  |||||||  | ||||||||  |||||||||||||| |  | ||| |||||| | ||| |     
T  13388483 agcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttcatccaata 13388384  T
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    | | ||||||| ||||||||||| |||| ||||||||||||||||||||    
T  13388383 aaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcatt 13388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 20491269 - 20491422
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttattttcagcgttggattgggttc 102  Q
    |||||| ||||| |||||| ||||||||| | ||||||||| || |||||||| |||||||||||||||||||| ||  |||||||  | || ||||| |    
T  20491269 catggtacttttgtccttgccaaaactgattggtttagtcccatatgtgaagttcatattggagaagctcttgggttgatttcagcactagagtgggtgc 20491368  T
Q  103 atgggcttaatctaggacctatcgattttgagctggatgtaaagagagtggttg 156  Q
     || ||| ||| | |||||||| || |||||| ||||||  |||||||||||||    
T  20491369 gtgagctcaatttgggacctattgactttgagatggatgcgaagagagtggttg 20491422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 347
Target Start/End: Original strand, 36566925 - 36567059
Alignment:
Q  207 tctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacc 306  Q
    ||||| || |||||||| |||||||||||||||||||||||||||  | |||||| | ||||||| |||||||||||||||| ||| ||| |||          
T  36566925 tctctttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagatccagaattatt------ 36567018  T
Q  307 actgagagagtgagtattagagagagtgttcataagagagt 347  Q
    | | | |||||||||||||||||| ||||||| ||||||||    
T  36567019 aataatagagtgagtattagagagtgtgttcaaaagagagt 36567059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 359
Target Start/End: Original strand, 33113976 - 33114152
Alignment:
Q  183 ctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaag 282  Q
    ||||||| |||| ||||| |||||| ||| ||  ||| ||| | ||||| | | |||||| ||||||||| |||| ||| ||| ||||||||||||||||    
T  33113976 ctagcaatactctcttttaaatactttctttaatactcactttcttattagtttaaatcattgtatgtcccaccattttatgtaggttcaattttcaaag 33114075  T
Q  283 tgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||| ||| |||||||||||||| | | | |||||||  || |||||||||| | ||| || | |||||||||||    
T  33114076 tgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtttaaaagtgaatcttgctagcatt 33114152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 45179378 - 45179270
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatta 325  Q
    ||||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||| ||||||||| | |||||  | | ||| | |||||||||    
T  45179378 tttattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtatta 45179279  T
Q  326 gagagagtg 334  Q
    |||||||||    
T  45179278 gagagagtg 45179270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 205 - 364
Target Start/End: Complemental strand, 50425019 - 50424859
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaa 303  Q
    |||||||||| |||| ||||||||||||||| ||||||||  ||  || |||||||| |||  |||| |||| ||||||||| |||||||| ||||||||    
T  50425019 actctctctaacactcactcttttattggataaaatcaatccataccccaccactttatgtaagttccatttccaaagtgtatgacccacattgatttaa 50424920  T
Q  304 accactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     ||| | | | ||||| | ||||||||||||   | |||||||||||||||||| ||||||    
T  50424919 cccaataaaaaagtgaatgttagagagagtgcctaaaagagagtgttgctagcactactct 50424859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 9165299 - 9165390
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtg 266  Q
    ||||||||||| | |||||| ||||| |  ||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9165299 gaggaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgtatgtcctaccactttatgtg 9165390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 24436650 - 24436540
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||||||||| ||| | ||||| |||| | ||| ||| ||| ||| ||||||  |||||||||||||||| ||| |||||||| ||||||||| ||    
T  24436650 gaggaatgctagcagcaccctcttttgaataatttctttagtactcacttttttatctgatgaaatcaatgtatatcccaccactttatgtgggttctat 24436551  T
Q  275 tttcaaagtgt 285  Q
    |||||||||||    
T  24436550 tttcaaagtgt 24436540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 333
Target Start/End: Original strand, 31866361 - 31866470
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagta 322  Q
    |||||| ||||||||||||||||||||||| || | ||| ||  ||||||||||| |||||||| | |||||||||||||||| | | ||| ||||||||    
T  31866361 tcttttgttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagta 31866459  T
Q  323 ttagagagagt 333  Q
    ||| |||||||    
T  31866460 ttaaagagagt 31866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 39499430 - 39499519
Alignment:
Q  213 tagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaa 303  Q
    ||||||| ||||||| ||| ||| ||||||||||||||| || |||||| |||| |||||||||||||| |||||| ||||||||||||||    
T  39499430 tagcactcactcttt-attagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaa 39499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 355
Target Start/End: Original strand, 18157039 - 18157214
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||||  |||||| |||||||| |||||||||| |||  ||| |||||||||||||||| ||||||||||| ||||||||  ||||     |||| |    
T  18157039 aatgctagggacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccactttaagtggaacacatttcc 18157138  T
Q  279 aaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    ||||||| ||||||||  ||| |||||||| | ||  |||||||||| |||||| |||| | ||||||||||||||||    
T  18157139 aaagtgtgagacccac-ttga-ttaaaccaataaggaagtgagtatttgagagaatgttgaaaagagagtgttgctag 18157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 11135925 - 11135853
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| ||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||| |||||||||||||    
T  11135925 gagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 16948603 - 16948523
Alignment:
Q  284 gtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||| ||||||||||||||| || | ||||||||||||||||||| | ||||||  ||||||||||||||||||| ||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagagaaaatgttcaacagagagtgttgctagcattcctct 16948523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 43851218 - 43851114
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    |||||||| ||||||||||| ||||| |   | |||||||| ||| |||| |||||||| |||||||||||||||||| |||||||| | ||||||| ||    
T  43851218 gaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttatatgggttccat 43851119  T
Q  275 tttca 279  Q
    |||||    
T  43851118 tttca 43851114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 364
Target Start/End: Complemental strand, 1093223 - 1093063
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||| ||||||  |||| |||||| |||||||||||||||||| | |||||||||| || |||  |||| ||||||||||  |||||||||||||||| |    
T  1093223 ctctttagcacgcactcgtttattagatgaaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaacta 1093124  T
Q  308 ctgag----agagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
     | ||    | |||| |||||| ||||||||||||  ||||||||||| || || ||||||    
T  1093123 ataagatatatagtgggtattaaagagagtgttcaagagagagtgttgttatcactactct 1093063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 4578752 - 4578632
Alignment:
Q  181 tgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtg-tgggttcaattttca 279  Q
    |||||||||||||| |||||||| |||||||  | |||| ||||||||||||| ||||||||||||| |||| |||||||| ||  |||| | |||| ||    
T  4578752 tgctagcaacactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtaggtcccaccactttatgcggggtcccatttcca 4578655  T
Q  280 aagtgta-gacccacaatgattt 301  Q
    ||||||| |||||||| ||||||    
T  4578654 aagtgtaggacccacattgattt 4578632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 15660931 - 15661063
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccactgagag 314  Q
    |||| ||||||||||||||| ||||||||| |||||| |||||||| || |||||  |||| |||| |||| ||  |||| |||||||| ||| | | ||    
T  15660931 cactcactcttttattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatga--cacattgatttaacccaataatag 15661028  T
Q  315 agtgagtattagagagagtgttcataagagagtgt 349  Q
    ||||||| ||||||||||||| || ||||||||||    
T  15661029 agtgagtgttagagagagtgtccaaaagagagtgt 15661063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 303
Target Start/End: Original strand, 24911493 - 24911588
Alignment:
Q  208 ctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaa 303  Q
    |||||||||||| | ||||||||| ||||||||| |||||||||| |||||||| ||||||||  |||| |||||| ||||  | |||||||||||    
T  24911493 ctctctagcactcattcttttattcgatgaaatccatgtatgtcccaccactttttgtgggttttatttccaaagtatagatacgcaatgatttaa 24911588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 6325993 - 6325864
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 274  Q
    ||||||| |||||||| ||||||||| || |||||||  |  | | |||| ||||||  || |||||||||||||||| |||| |||||||| ||||  |    
T  6325993 gaggaatactagcaacgctcacttttgaacactctct--aataatcactcatttattaaataaaatcaatgtatgtcccaccattttgtgtgagttct-t 6325897  T
Q  275 tttcaaagtgtagacccacaatgatttaaacca 307  Q
    |||||||||||| |||||||||||| |||||||    
T  6325896 tttcaaagtgtaaacccacaatgatgtaaacca 6325864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 11430631 - 11430555
Alignment:
Q  170 ataacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| |||||||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||| |||| ||||||||    
T  11430631 ataaagaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg-tgaattcaatgta 11430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 12767418 - 12767329
Alignment:
Q  268 gttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagca 357  Q
    |||| ||||| ||||||||||| || |||||||||||||| | | |||||||||||||||||| || |||| |||||| | |||||||||    
T  12767418 gttctatttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagagggttttcaaaagagatttttgctagca 12767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 32848572 - 32848649
Alignment:
Q  170 ataacgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||| ||||| |||||||||||||| ||||| |  ||| ||||||||||||||||||||||||| |||| ||||||||    
T  32848572 ataaagaggactgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 32848649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 347
Target Start/End: Original strand, 15906412 - 15906579
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttc 278  Q
    ||||||| | ||||||| |||| || ||| ||||||| ||||| | |||||||| || |||||||||||||||| | |||||||||||   ||||||| |    
T  15906412 aatgctaacgacactcaatttttaacactttctctagtacttaatattttattgcataaaatcaatgtatgtcc-atcactttgtgtgaactcaatttac 15906510  T
Q  279 aaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagt 347  Q
    ||| ||||||   ||||||||||||| || | |  || ||||||||||||| | |||| | ||||||||    
T  15906511 aaaatgtagatttacaatgatttaaatcaataaacgaatgagtattagagataatgttaaaaagagagt 15906579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 37525572 - 37525656
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaac 305  Q
    ||||||| ||||||| ||| | |||||||| | |||| ||| ||||||||||||||||||||| |||| | ||||||||||||||    
T  37525572 actctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaac 37525656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 41095603 - 41095675
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||| |||  |||||||| |||||||||||||    
T  41095603 gaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgta 41095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 359
Target Start/End: Original strand, 28109899 - 28110049
Alignment:
Q  209 tctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga-cccacaatgatttaaacca 307  Q
    ||||||||||| ||| ||||||||| ||||||||||| |||| | |||| ||| ||||||||| | |||||||||||||| || | |||||||| | |||    
T  28109899 tctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttcca-tttcaaagtgtagatcctagaatgatttcatcca 28109997  T
Q  308 ctgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
     | | | ||||||||||||||| |||  | | ||||||||||| ||| ||||    
T  28109998 ataaaaaagtgagtattagagaaagtacttaaaagagagtgttcctaacatt 28110049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 21466751 - 21466681
Alignment:
Q  178 gaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtat 248  Q
    |||||||||||||| ||||||||  | ||||||| ||||||| ||| |||||||||||||||||| |||||    
T  21466751 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcagtgtat 21466681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 47644396 - 47644331
Alignment:
Q  259 tttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||| || | |||||| |||||||    
T  47644396 tttgtgtgggttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagtatt 47644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 5602721 - 5602657
Alignment:
Q  197 ttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    |||| |||||| |||||| |||||||||| |||||||||||||| ||| ||||||| ||||||||    
T  5602721 tttttaatactttctctaacacttactctcttattggatgaaattaatatatgtcccaccacttt 5602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 364
Target Start/End: Original strand, 28274797 - 28274973
Alignment:
Q  189 acactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt-ag 287  Q
    |||||| |||||||| |||||||||| |||| ||||| |||||||||||||  | ||||||||| | ||| ||  ||||   | |||| ||| |||| ||    
T  28274797 acactctcttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccatcaccttaagtggaacccatttccaatgtgtgag 28274896  T
Q  288 acccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||  |||||||||||| | | | |||| || ||  |||||||||| | ||||||||||| |||||| ||||||    
T  28274897 acccaccttgatttaaaccaataataaagtgggtgtttaagagagtgttgaaaagagagtgttactagcactactct 28274973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 357
Target Start/End: Original strand, 28941869 - 28942000
Alignment:
Q  225 ttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtatt 324  Q
    |||||||||||||||| | ||||||||| ||||  || ||||||||| |||||| |||| | || ||||| | | ||||| || | ||||||||| | ||    
T  28941869 ttttattggatgaaattattgtatgtcccaccatattatgtgggttccattttctaagtatggatccacatttacttaaatcaataagagagtgaatgtt 28941968  T
Q  325 agagagagtgttcataagagagtgttgctagca 357  Q
    ||| |||||||| | || |||||||||||||||    
T  28941969 agatagagtgttta-aaaagagtgttgctagca 28942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 743467 - 743546
Alignment:
Q  226 tttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaac 305  Q
    ||||||||||||||||||||||||| | | |||||||||   ||| |||||||||| |  ||||| ||||||||||||||    
T  743467 tttattggatgaaatcaatgtatgttccatcactttgtggaagtttaattttcaaaatagagacctacaatgatttaaac 743546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 13889287 - 13889330
Alignment:
Q  321 tattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  13889287 tattagagagagtgttcaaaagagagtgttgctagcattcctct 13889330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 21466680 - 21466614
Alignment:
Q  298 atttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||| || | ||| ||||| |||||||||||||||||| ||||||||| |||||||| ||||||    
T  21466680 atttaaatcaataagaaagtgaatattagagagagtgttcaaaagagagtggtgctagcactactct 21466614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 5212891 - 5212948
Alignment:
Q  24 aaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttggtttat 81  Q
    |||||||| | ||||||||| || |||||||| ||||| |||||||||||||||||||    
T  5212891 aaaactgaatggtttagtccgatatgtgaagttcatataggagaagctcttggtttat 5212948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 364
Target Start/End: Original strand, 29418524 - 29418669
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga-cccacaatgatttaaaccact-gagagagtg 318  Q
    ||||||||||||||| |||| ||||||| ||  |||||||| |||| |||| |||| ||||||||||| || ||| |||||| | ||| |  | | ||||    
T  29418524 actcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtagatcctacattgatttcacccaataaaaaaagtg 29418623  T
Q  319 agtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||  || |||||||| ||| |||||| ||||||||||||| ||||    
T  29418624 agtgatatagagagtgatcaaaagagactgttgctagcattcctct 29418669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 50773109 - 50773177
Alignment:
Q  179 aatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    ||||||||||| |||| ||||| || ||||||||||||||| | ||||||||||| | |||| ||||||    
T  50773109 aatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaattaatgta 50773177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 13114803 - 13114854
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    ||||||||| ||||||||||||| || |||||||||| ||||||||| ||||    
T  13114803 agagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatttctct 13114854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 359
Target Start/End: Original strand, 32848695 - 32848762
Alignment:
Q  292 acaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||| | ||| | | |||||||||  ||||||||||||||| |||||||||||| |||||||    
T  32848695 acaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcatt 32848762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 44739165 - 44739114
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    |||||||||  ||||||||||||||| ||||||||||||||| |||| ||||    
T  44739165 agagtgagtgctagagagagtgttcaaaagagagtgttgctaacattcctct 44739114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 26980395 - 26980441
Alignment:
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||||    
T  26980395 agagtgagtattagagagagtgttgaaaagtgagtgttgttagcatt 26980441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 14341083 - 14341018
Alignment:
Q  196 cttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    |||||||| |||||||||| |||| | | |||||||||||||||  ||| ||||||| ||||||||    
T  14341083 cttttcaacactctctctaacactcatttttttattggatgaaactaatatatgtcccaccacttt 14341018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 41095743 - 41095788
Alignment:
Q  314 gagtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  41095743 gagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 11135784 - 11135740
Alignment:
Q  315 agtgagtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    |||||||  ||||||||||| ||| ||||||||||||||||||||    
T  11135784 agtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 11135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 28274835 - 28274783
Alignment:
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||| |||||||||||||| | ||||||||||  |||| |||||||    
T  28274835 agagagtgagtgttagagagagtgttgaaaagagagtgtccctagtattactc 28274783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 44760716 - 44760756
Alignment:
Q  221 actcttttattggatgaaatcaatgtatgtcctaccacttt 261  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  44760716 actcttttattggatgaaatcaatgtacatcataccacttt 44760756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 50308786 - 50308822
Alignment:
Q  207 tctctctagcacttactcttttattggatgaaatcaa 243  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  50308786 tctctctagcactcactcttttattgggtgaaatcaa 50308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 50539525 - 50539565
Alignment:
Q  319 agtattagagagagtgttcataagagagtgttgctagcatt 359  Q
    ||||||||||||| |||||| || |||||||||||||||||    
T  50539525 agtattagagagaatgttcaaaaaagagtgttgctagcatt 50539565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 213 - 363
Target Start/End: Original strand, 27847 - 27997
Alignment:
Q  213 tagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgag 312  Q
    ||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||| | ||    
T  27847 tagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataag 27946  T
Q  313 agagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||| |||||    
T  27947 agagtgagtattaaagagagtgttcaaaagagggtgttgctagcactactc 27997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 358
Target Start/End: Complemental strand, 27015 - 26862
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    ||||||| || |||| ||||| ||||||||  |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  27015 actctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaa 26916  T
Q  305 ccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcat 358  Q
    ||| | | ||||||  | ||||||| |||| ||| ||  |||||||||||||||    
T  26915 ccaataaaagagtggatgttagagaaagtgctcaaaaacgagtgttgctagcat 26862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 9691 - 9791
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||| |||| ||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| |||||| |||||||    
T  9691 actctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaa 9790  T
Q  305 c 305  Q
    |    
T  9791 c 9791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 11237 - 11337
Alignment:
Q  205 actctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaa 304  Q
    |||||||||| |||| ||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| |||||| |||||||    
T  11237 actctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaa 11336  T
Q  305 c 305  Q
    |    
T  11337 c 11337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 2237 - 2346
Alignment:
Q  193 tcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagaccca 292  Q
    ||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||  || |||||||||||  |  ||||| ||| |||||| |||    
T  2237 tcacttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtgg--tgcatttttaaaatgtagatcca 2334  T
Q  293 caatgatttaaa 304  Q
    ||||||||||||    
T  2335 caatgatttaaa 2346  T

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Target: scaffold0832 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 2268 - 2377
Alignment:
Q  193 tcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagaccca 292  Q
    ||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||  || |||||||||||  |  ||||| ||| |||||| |||    
T  2268 tcacttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtgg--tgcatttttaaaatgtagatcca 2365  T
Q  293 caatgatttaaa 304  Q
    ||||||||||||    
T  2366 caatgatttaaa 2377  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 204810 - 204704
Alignment:
Q  256 cactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctag 355  Q
    ||||||||||  | |||||||| ||| |||||||  ||||| || ||||||| | | |||||||||| |||||||| |||||| || |||||||||||||    
T  204810 cactttgtgtctgatcaatttttaaattgtagacttacaattatataaaccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttgctag 204711  T
Q  356 cattact 362  Q
    |||||||    
T  204710 cattact 204704  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 363
Target Start/End: Original strand, 296832 - 297022
Alignment:
Q  174 cgaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaa 273  Q
    |||| ||||||||  |||||  |||||||| |||||||||| |||| ||||| |||||||||||||  | ||||||||| ||||| ||  ||||   | |    
T  296832 cgagtaatgctagggacactttcttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccaccaccttaagtggaaccca 296931  T
Q  274 ttttcaaagtgt-agacccacaatgatttaaaccactgagagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||| ||| |||| ||||||||  | |||||||||| | |   ||||||| || ||||||||||| | |||||||||||||||||| |||||    
T  296932 tttccaatgtgtgagacccaccttcatttaaaccaataatgaagtgagtgtttgagagagtgttgaaaagagagtgttgctagcactactc 297022  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 296885 - 296833
Alignment:
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||| |||||||||||||| | |||| |||||  ||||||||||||    
T  296885 agagagtgagtgttagagagagtgttgaaaagaaagtgtccctagcattactc 296833  T

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Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 8554 - 8405
Alignment:
Q  219 ttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt----ttcaaagtgtagacccacaatgatttaaaccactgagag 314  Q
    |||||||||||| ||||||||||||| ||||||  |||||||| ||| | |  || |    ||| |||||||||| || |||||||||||||| | | ||    
T  8554 ttactcttttatgggatgaaatcaatatatgtctcaccactttatgttgatctaactaactttcgaagtgtagactcataatgatttaaaccaataaaag 8455  T
Q  315 agtgagtattagagagagtgttcataagagagtgttgctagcattactct 364  Q
    | | ||||||| ||||||| |||| |||||||||||| |||| |||||||    
T  8454 aattagtattaaagagagtattcaaaagagagtgttgttagccttactct 8405  T

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Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 27358 - 27420
Alignment:
Q  223 tcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgt 285  Q
    ||||||||||| |||||||||| ||||||| |||||||| ||| ||||| |||||||||||||    
T  27358 tcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgt 27420  T

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Target: scaffold0250 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 21416 - 21488
Alignment:
Q  3 catggtgcttttctccttgtcaaaactgagtagtttagtccaatctgtgaagtacatattggagaagctcttg 75  Q
    |||||| ||||| | |||| ||||||||| | ||||||||| || |||||||| |||||||||||||||||||    
T  21416 catggtacttttgttcttgccaaaactgattggtttagtcccatatgtgaagttcatattggagaagctcttg 21488  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 30907 - 30979
Alignment:
Q  175 gaggaatgctagcaacactcacttttcaatactctctctagcacttactcttttattggatgaaatcaatgta 247  Q
    |||||| ||||||||||||| ||||| | |||||| ||||||| | ||| ||||||||| ||| |||||||||    
T  30907 gaggaaggctagcaacactctcttttgagtactctttctagcattcacttttttattgggtgacatcaatgta 30979  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 31057 - 30984
Alignment:
Q  214 agcacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||||| ||| ||||||| | |||||| || ||||||| ||||||||| | |||||||  ||||||||||||||    
T  31057 agcactcacttttttattaggtgaaattaacgtatgtcataccactttatatgggttccgttttcaaagtgtag 30984  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 121247 - 121196
Alignment:
Q  311 agagagtgagtattagagagagtgttcataagagagtgttgctagcattactc 363  Q
    ||||||||||||||||||||| | |||| |||||| |||||||||||||||||    
T  121247 agagagtgagtattagagagatttttca-aagagaatgttgctagcattactc 121196  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 35632 - 35703
Alignment:
Q  216 cacttactcttttattggatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtag 287  Q
    |||| ||||| ||||| |||||||||||||||||||| | || ||| ||||||||| ||| ||||| |||||    
T  35632 cactcactctcttatttgatgaaatcaatgtatgtcccatcattttatgtgggttccattctcaaaatgtag 35703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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