View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21374_high_14 (Length: 240)
Name: NF21374_high_14
Description: NF21374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21374_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 22714980 - 22714770
Alignment:
| Q |
18 |
gtaataagattcataataataataat---cagaagagatcatcatcagttgttgtttcagcagttggagatgtatcttctgatggtactatttatcttgt |
114 |
Q |
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| T |
22714980 |
gtaataagattcataataataataataatcagaagagatcatcatcagttgttgtttcagcagttggagatgtatcttctgatggtactatttatcttgt |
22714881 |
T |
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| Q |
115 |
tgctggtgctattggaattgctcttgttggaactgcatttcctatcattttctctcgtaaagacacgtaagtaacatcatcattagtttcattttcatgg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22714880 |
tgctggtgctattggaattgctcttgttggaactgcatttcctatcattttctctcgtaaagacacgtaagtaacatcatcattagtttcattttcatgg |
22714781 |
T |
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| Q |
215 |
ttttatatttt |
225 |
Q |
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||||||||||| |
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| T |
22714780 |
ttttatatttt |
22714770 |
T |
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