View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21374_low_10 (Length: 294)
Name: NF21374_low_10
Description: NF21374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21374_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 15167552 - 15167274
Alignment:
| Q |
1 |
ctctaacacatgataagcataagatggttcactcagatgggaaaaacctcaagagtaggtctaagtggaggttcctcaaactaaagagcttattaatatt |
100 |
Q |
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| T |
15167552 |
ctctaacacatgataagcataagatggttcactcagatgggaaaaatctcaagagtaggtctaagtggaggttcctcaaactaaagagcttattaatatt |
15167453 |
T |
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| Q |
101 |
ccgactgacattgttttacaacaaagtcctattgtagaaggacttgaacaacatctggaacaacttgaagaggacatggtaatagcaacacatattctgc |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15167452 |
ccgactgacattgttttacaacagagtcctattgtagaaggacttgaacaacatctggaacaacttgaagaggacatggtaatagcaacacatattctgc |
15167353 |
T |
|
| Q |
201 |
aaattgataatcagagtggtgttgaggatgcaggcatcatcttgaacaattcttttgatctgcttagctcagttgaggt |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
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| T |
15167352 |
aaattgataatcagagtggtgttgaggatgcaggcatcaccttgaacaattctttcgatctgcttagctcagttgaggt |
15167274 |
T |
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