View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21374_low_14 (Length: 251)
Name: NF21374_low_14
Description: NF21374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21374_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 9411811 - 9411851
Alignment:
| Q |
195 |
gacctatttttagatcctgagaaaattcgtaaaacccaaat |
235 |
Q |
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| T |
9411811 |
gacctatttttagatcctgagaaaattcgtaaaacccaaat |
9411851 |
T |
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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 9411702 - 9411738
Alignment:
| Q |
86 |
ttattagaagtatttcattacagtcaatgaatatcac |
122 |
Q |
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| T |
9411702 |
ttattagaagtatttcattacagtcaatgaatatcac |
9411738 |
T |
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