View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21374_low_9 (Length: 296)
Name: NF21374_low_9
Description: NF21374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21374_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 21944629 - 21944862
Alignment:
| Q |
4 |
tgcagcaattttggtgcatagatggttacctgggtcaagagtgttgaagaaatcggtgcatttatgtcttcaaggggtggctttagcttctgggatattt |
103 |
Q |
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| T |
21944629 |
tgcagcaattttggtgcatagatggttacctggatcaagagggttgaagaaatcggtgcatttatgtcttcaaggggtggctttagcttctgggatattt |
21944728 |
T |
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| Q |
104 |
gggatttggacaaaattccaagtaaatgatgggattgtggctaatttctacagtctgcattcatggatgggtttgatttgtgtatcactctttggagctc |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21944729 |
gggatttggacaaaattccaagtaaatgatgggattgtggctaatttctacagtctgcattcatggatgggtttgatttgtgtatcactctttggagctc |
21944828 |
T |
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| Q |
204 |
aggtgggtattctctatcatttctttacattttt |
237 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
21944829 |
aggtgggtattctctatcatttctttacattttt |
21944862 |
T |
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