View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21377_low_10 (Length: 234)
Name: NF21377_low_10
Description: NF21377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21377_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 26293972 - 26293759
Alignment:
| Q |
6 |
agaaaaaatattaatgttgacattagttttcacaattaattttgagtaaccctttaataagtggaataatttctgctcaattaactatactcaaaactaa |
105 |
Q |
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| T |
26293972 |
agaaaaaatattaatgttgacattagttttcacaattaattttgagtaaccctttaataagtggaataatttctgctcaattaactatactcaaaactaa |
26293873 |
T |
|
| Q |
106 |
ctgtatactcagaattttctatgatacttcttagaaaattaacagtgtcctacaataagtgatgaagttatgagatgattaaatagtttctactctgaac |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26293872 |
ctgtatactcagaattttctatgatacttcttagaaaattaacagtgtcctacaataagtgatgaagttatgagatgattaaatagtttctactctgaac |
26293773 |
T |
|
| Q |
206 |
ttaatactgcatat |
219 |
Q |
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|||||||||||||| |
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| T |
26293772 |
ttaatactgcatat |
26293759 |
T |
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