View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21377_low_11 (Length: 213)

Name: NF21377_low_11
Description: NF21377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21377_low_11
NF21377_low_11
[»] chr3 (10 HSPs)
chr3 (15-150)||(146758-146882)
chr3 (147-200)||(37797236-37797289)
chr3 (148-191)||(15321309-15321352)
chr3 (149-200)||(27276352-27276403)
chr3 (148-181)||(682684-682717)
chr3 (148-198)||(43150-43200)
chr3 (148-198)||(10118542-10118592)
chr3 (147-181)||(41756768-41756802)
chr3 (149-197)||(10050011-10050059)
chr3 (149-197)||(11820567-11820615)
[»] chr2 (14 HSPs)
chr2 (147-200)||(26912898-26912951)
chr2 (148-200)||(24255452-24255504)
chr2 (148-197)||(2870628-2870677)
chr2 (147-200)||(3650531-3650584)
chr2 (149-200)||(21418815-21418866)
chr2 (144-181)||(24270556-24270593)
chr2 (149-181)||(40483710-40483742)
chr2 (147-198)||(28659304-28659355)
chr2 (148-198)||(39435843-39435893)
chr2 (149-198)||(33351683-33351732)
chr2 (149-198)||(37818139-37818188)
chr2 (149-181)||(3564632-3564664)
chr2 (149-181)||(11042442-11042474)
chr2 (150-198)||(41912404-41912452)
[»] scaffold0770 (1 HSPs)
scaffold0770 (148-200)||(4585-4637)
[»] scaffold0118 (1 HSPs)
scaffold0118 (148-200)||(19049-19101)
[»] scaffold0029 (2 HSPs)
scaffold0029 (148-200)||(102889-102941)
scaffold0029 (147-181)||(133357-133391)
[»] chr7 (7 HSPs)
chr7 (148-200)||(42239868-42239920)
chr7 (147-197)||(46053530-46053580)
chr7 (148-198)||(12773141-12773191)
chr7 (149-198)||(12730768-12730817)
chr7 (148-180)||(7044592-7044624)
chr7 (149-181)||(12727309-12727341)
chr7 (149-197)||(42074059-42074107)
[»] chr5 (12 HSPs)
chr5 (148-200)||(24622701-24622753)
chr5 (149-200)||(10031979-10032030)
chr5 (148-200)||(3868222-3868274)
chr5 (149-200)||(3700876-3700927)
chr5 (148-198)||(27890324-27890374)
chr5 (148-198)||(30322416-30322466)
chr5 (149-198)||(8424637-8424686)
chr5 (150-181)||(14184606-14184637)
chr5 (147-181)||(4057221-4057255)
chr5 (148-198)||(37379990-37380040)
chr5 (147-188)||(2254365-2254406)
chr5 (150-182)||(6095206-6095238)
[»] chr4 (10 HSPs)
chr4 (148-200)||(55549961-55550013)
chr4 (147-198)||(13236137-13236188)
chr4 (149-198)||(37519373-37519422)
chr4 (149-198)||(37523589-37523638)
chr4 (149-197)||(795683-795731)
chr4 (148-200)||(49716669-49716721)
chr4 (148-198)||(49779997-49780047)
chr4 (149-198)||(610984-611033)
chr4 (149-198)||(1864995-1865044)
chr4 (149-178)||(14288639-14288668)
[»] chr1 (13 HSPs)
chr1 (148-200)||(52508114-52508166)
chr1 (143-198)||(2349477-2349532)
chr1 (146-198)||(24493724-24493776)
chr1 (149-192)||(6300525-6300568)
chr1 (147-198)||(48770622-48770673)
chr1 (148-181)||(16048435-16048468)
chr1 (148-181)||(28969511-28969544)
chr1 (149-181)||(7102780-7102812)
chr1 (149-181)||(25066553-25066585)
chr1 (149-200)||(16650061-16650112)
chr1 (148-183)||(37384073-37384108)
chr1 (155-197)||(27347057-27347099)
chr1 (149-181)||(14862415-14862447)
[»] chr8 (16 HSPs)
chr8 (149-200)||(14788683-14788734)
chr8 (148-200)||(14787570-14787622)
chr8 (148-200)||(14787793-14787845)
chr8 (148-200)||(14788016-14788068)
chr8 (148-200)||(14788239-14788291)
chr8 (148-200)||(14788462-14788514)
chr8 (148-197)||(14787350-14787399)
chr8 (147-197)||(18665981-18666031)
chr8 (147-182)||(23102938-23102973)
chr8 (149-198)||(25200563-25200612)
chr8 (149-181)||(4971292-4971324)
chr8 (150-198)||(30334039-30334087)
chr8 (147-198)||(7782728-7782779)
chr8 (147-198)||(7832002-7832053)
chr8 (146-181)||(14105026-14105061)
chr8 (149-181)||(33854788-33854820)
[»] chr6 (10 HSPs)
chr6 (150-200)||(24202625-24202675)
chr6 (149-198)||(23149332-23149381)
chr6 (156-200)||(4212736-4212780)
chr6 (147-198)||(10197496-10197547)
chr6 (146-181)||(10198997-10199032)
chr6 (146-197)||(12576853-12576904)
chr6 (149-181)||(15339385-15339417)
chr6 (150-182)||(18864486-18864518)
chr6 (148-198)||(30890851-30890901)
chr6 (149-177)||(24200920-24200948)
[»] scaffold0131 (1 HSPs)
scaffold0131 (146-198)||(29137-29189)
[»] scaffold0090 (1 HSPs)
scaffold0090 (149-198)||(41176-41225)
[»] scaffold0025 (1 HSPs)
scaffold0025 (143-180)||(22120-22157)
[»] scaffold0316 (1 HSPs)
scaffold0316 (149-198)||(8658-8707)
[»] scaffold0012 (1 HSPs)
scaffold0012 (148-197)||(53001-53050)
[»] scaffold0583 (1 HSPs)
scaffold0583 (149-181)||(5847-5879)
[»] scaffold0073 (4 HSPs)
scaffold0073 (148-180)||(13425-13457)
scaffold0073 (148-181)||(48463-48496)
scaffold0073 (149-181)||(48718-48750)
scaffold0073 (149-181)||(53249-53281)
[»] scaffold0003 (1 HSPs)
scaffold0003 (149-197)||(192877-192925)
[»] scaffold0376 (1 HSPs)
scaffold0376 (147-198)||(14197-14248)
[»] scaffold0356 (1 HSPs)
scaffold0356 (146-181)||(2459-2494)
[»] scaffold0002 (1 HSPs)
scaffold0002 (147-181)||(311185-311219)
[»] scaffold0276 (1 HSPs)
scaffold0276 (148-181)||(181-214)
[»] scaffold0281 (1 HSPs)
scaffold0281 (149-181)||(9808-9840)
[»] scaffold0196 (1 HSPs)
scaffold0196 (149-181)||(25528-25560)
[»] scaffold0150 (1 HSPs)
scaffold0150 (149-181)||(8039-8071)


Alignment Details
Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 146758 - 146882
Alignment:
Q  15 catagggcatcgtggtactaacatatagtttgaaattgaattgaaggtacacatatagaaacaatgaaagaacgatgaatccattttgaattttatatgc 114  Q
    |||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  146758 catagggcatcgtggtactaacatatagtttga-----------aggtacacatatagaaacaataaaacaacgatgaatccattttgaattttatatgc 146846  T
Q  115 cgaagggcaacgcaaatccgaaagaaagaaaataat 150  Q
    |||| |||| ||||||||||||||||||||||||||    
T  146847 cgaaaggcaccgcaaatccgaaagaaagaaaataat 146882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 37797236 - 37797289
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  37797236 taatctatataatataaatttaggatctatttcatagttttttatggaaatgtt 37797289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 15321309 - 15321352
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttat 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  15321309 aatctatataatataaatttaggacctatttcatatctttttat 15321352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 27276403 - 27276352
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  27276403 atctatataatataaatttaggacctatttcataactttttatagaaatgtt 27276352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 682684 - 682717
Alignment:
Q  148 aatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||||||||||    
T  682684 aatctatataatataaatttaggacctatttcat 682717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 43200 - 43150
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  43200 aatctatataatataaatttaggatccatttcatagacttttatggaaatg 43150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 10118592 - 10118542
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  10118592 aatctatataatataaatttaggatccatttcatagacttttatggaaatg 10118542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 41756768 - 41756802
Alignment:
Q  147 taatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||| |||||||||||||    
T  41756768 taatctatataatataaatttgggacctatttcat 41756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 10050059 - 10050011
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    |||||||||||||||||||| |||| |||||||||  ||||||| ||||    
T  10050059 atctatataatataaatttatgacccatttcatagacttttatggaaat 10050011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 11820615 - 11820567
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    |||||||||||||||||||| |||| |||||||||  ||||||| ||||    
T  11820615 atctatataatataaatttatgacccatttcatagacttttatggaaat 11820567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 8e-20; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 26912898 - 26912951
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26912898 taatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 26912951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 24255452 - 24255504
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24255452 aatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 24255504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 2870628 - 2870677
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2870628 aatctatataatataaatttaggacctatttcatagctttttatggaaat 2870677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 3650584 - 3650531
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  3650584 taatctatataatataaatttaggacctatttcatagctttatatggaaatgtt 3650531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 21418866 - 21418815
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  21418866 atctatataatataaatttatgacctatttcatagctttttatggaaatgtt 21418815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 24270593 - 24270556
Alignment:
Q  144 aaataatctatataatataaatttaggacctatttcat 181  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24270593 aaattatctatataatataaatttaggacctatttcat 24270556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 40483710 - 40483742
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||||||||||    
T  40483710 atctatataatataaatttaggacctatttcat 40483742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 28659304 - 28659355
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||| ||| |||||||||  ||||||| |||||    
T  28659304 taatctatataatataaatttagaacccatttcatagacttttatggaaatg 28659355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 39435843 - 39435893
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||| |||||    
T  39435843 aatctatataatataaatttatgacctattttatagacttttatggaaatg 39435893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 33351732 - 33351683
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| ||||| |||  ||||||| |||||    
T  33351732 atctatataatataaatttaggacccatttcgtagacttttatggaaatg 33351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 37818139 - 37818188
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||| |||||    
T  37818139 atctatataatataaatttagaacccatttcatagacttttatggaaatg 37818188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 3564632 - 3564664
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||| |||||||||    
T  3564632 atctatataatataaatttaggatctatttcat 3564664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 11042474 - 11042442
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||| ||||||||||||    
T  11042474 atctatataatataaatttaagacctatttcat 11042442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 41912404 - 41912452
Alignment:
Q  150 tctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||| |||| |||||||||  ||||||| |||||    
T  41912404 tctatataatataaatttatgacccatttcatagacttttatggaaatg 41912452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 4585 - 4637
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4585 aatctatataatataaatttatgacctatttcatagctttttatgaaaatgtt 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 19049 - 19101
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19049 aatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 19101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 102889 - 102941
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  102889 aatctatataatataaatttatgacctatttcatagctttttatgaaaatgtt 102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 133357 - 133391
Alignment:
Q  147 taatctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||| ||||||||||||    
T  133357 taatctatataatataaatttatgacctatttcat 133391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 42239920 - 42239868
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42239920 aatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 42239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 46053580 - 46053530
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46053580 taatctatataatataaatttaggacctatttcatagctttttatggaaat 46053530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 12773141 - 12773191
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  12773141 aatctatataatataaatttaggacccatttcatagacttttatggaaatg 12773191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 12730817 - 12730768
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  12730817 atctatataatataaatttaggacccatttcatagacttttatggaaatg 12730768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 7044624 - 7044592
Alignment:
Q  148 aatctatataatataaatttaggacctatttca 180  Q
    |||||||||||||||||||||||||||||||||    
T  7044624 aatctatataatataaatttaggacctatttca 7044592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 12727341 - 12727309
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||| |||||||||    
T  12727341 atctatataatataaatttaggatctatttcat 12727309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 42074059 - 42074107
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    ||||||||||||||||||||||| |||||||||  |  |||||||||||    
T  42074059 atctatataatataaatttaggatctatttcatgtccctttatgaaaat 42074107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 24622701 - 24622753
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24622701 aatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 24622753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 10032030 - 10031979
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10032030 atctatataatataaatttaggacctatttcatagctttttatggaaatgtt 10031979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 3868222 - 3868274
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  3868222 aatctatataatataaatttaggacctatttcatagctttataaggaaatgtt 3868274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 3700927 - 3700876
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  3700927 atctatataatataaatttaggacctatttcatagctttataaggaaatgtt 3700876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 27890374 - 27890324
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  27890374 aatctatataatataaatttaggacccatttcatagacttttatggaaatg 27890324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 30322466 - 30322416
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  30322466 aatctatataatataaatttaggacatatttcatagacttttatggaaatg 30322416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 8424637 - 8424686
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  8424637 atctatataatataaatttaggacccatttcatagacttttatggaaatg 8424686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 181
Target Start/End: Original strand, 14184606 - 14184637
Alignment:
Q  150 tctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||||||||    
T  14184606 tctatataatataaatttaggacctatttcat 14184637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 4057255 - 4057221
Alignment:
Q  147 taatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||| |||||||||    
T  4057255 taatctatataatataaatttaggatctatttcat 4057221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 37380040 - 37379990
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  37380040 aatctatataatataaatttaggaaccatttcatagacttttatggaaatg 37379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 2254365 - 2254406
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttt 188  Q
    ||||||||||||||||||||||||| | ||||||||| ||||    
T  2254365 taatctatataatataaatttaggatccatttcatagatttt 2254406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 6095238 - 6095206
Alignment:
Q  150 tctatataatataaatttaggacctatttcata 182  Q
    ||||||||||||||||||||||| |||||||||    
T  6095238 tctatataatataaatttaggacttatttcata 6095206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 55549961 - 55550013
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55549961 aatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 55550013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 13236137 - 13236188
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||| |||||    
T  13236137 taatctatataatataaatttaggacctattttatagacttttatggaaatg 13236188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 37519373 - 37519422
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  37519373 atctatataatataaatttaggacccatttcatagacttttatggaaatg 37519422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 37523589 - 37523638
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  37523589 atctatataatataaatttaggacccatttcatagacttttatggaaatg 37523638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 795731 - 795683
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    |||||||||||||||||||||||||||||||||  |  |||||||||||    
T  795731 atctatataatataaatttaggacctatttcatgtccctttatgaaaat 795683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 49716721 - 49716669
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||||||    
T  49716721 aatctatataatataaatttaggatccatttcatagacttttatggaaatgtt 49716669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 49779997 - 49780047
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||| ||| |||||||||  ||||||| |||||    
T  49779997 aatctatataatataaatttagaacccatttcatagacttttatggaaatg 49780047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 610984 - 611033
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||| |||| |||||||||  ||||||| |||||    
T  610984 atctatataatataaatttatgacccatttcatagacttttatggaaatg 611033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 1865044 - 1864995
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  1865044 atctatataatataaatttaggatccatttcatagacttttatggaaatg 1864995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 14288639 - 14288668
Alignment:
Q  149 atctatataatataaatttaggacctattt 178  Q
    ||||||||||||||||||||||||||||||    
T  14288639 atctatataatataaatttaggacctattt 14288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 52508166 - 52508114
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  52508166 aatctatataatataaatttaggacctatttcatagctttttatggaaatgtt 52508114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 2349532 - 2349477
Alignment:
Q  143 aaaataatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  2349532 aaaataatctatataatataaatttaggacccatttcatagacttttatggaaatg 2349477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 24493724 - 24493776
Alignment:
Q  146 ataatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  24493724 ataatctatataatataaatttaggacccatttcatagacttttatggaaatg 24493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 6300525 - 6300568
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatg 192  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  6300525 atctatataatataaatttaggacctatttcatagacttttatg 6300568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 48770622 - 48770673
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  48770622 taatctatataatataaatttaggacccatttcatagacttttatggaaatg 48770673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 16048468 - 16048435
Alignment:
Q  148 aatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||||||||||    
T  16048468 aatctatataatataaatttaggacctatttcat 16048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 28969544 - 28969511
Alignment:
Q  148 aatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||||||||||    
T  28969544 aatctatataatataaatttaggacctatttcat 28969511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 7102812 - 7102780
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||||||||||    
T  7102812 atctatataatataaatttaggacctatttcat 7102780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 25066553 - 25066585
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||||||||||    
T  25066553 atctatataatataaatttaggacctatttcat 25066585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 16650061 - 16650112
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||| |||||||    
T  16650061 atctatataatataaatttagtacccatttcatagacttttatggaaatgtt 16650112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 37384073 - 37384108
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatag 183  Q
    |||||||||||||||||||||||||| |||||||||    
T  37384073 aatctatataatataaatttaggacccatttcatag 37384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 27347099 - 27347057
Alignment:
Q  155 ataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    |||||||||||||||||||||||||||||  ||||||| ||||    
T  27347099 ataatataaatttaggacctatttcatagacttttatggaaat 27347057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 14862447 - 14862415
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||| ||||||    
T  14862447 atctatataatataaatttaggacctgtttcat 14862415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 14788734 - 14788683
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14788734 atctatataatataaatttaggacctatttcatagctttatatgaaaatgtt 14788683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 14787622 - 14787570
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14787622 aatctatataatataaatttaggacctatttcatagctttatatggaaatgtt 14787570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 14787845 - 14787793
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14787845 aatctatataatataaatttaggacctatttcatagctttatatggaaatgtt 14787793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 14788068 - 14788016
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14788068 aatctatataatataaatttaggacctatttcatagctttatatggaaatgtt 14788016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 14788291 - 14788239
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14788291 aatctatataatataaatttaggacctatttcatagctttatatggaaatgtt 14788239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 14788514 - 14788462
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14788514 aatctatataatataaatttaggacctatttcatagctttatatggaaatgtt 14788462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 14787399 - 14787350
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  14787399 aatctatataatataaatttaggacctatttcatagctttatatggaaat 14787350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 18666031 - 18665981
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  18666031 taatctatataatataaatttaggacccatttcatagacttttatgaaaat 18665981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 23102938 - 23102973
Alignment:
Q  147 taatctatataatataaatttaggacctatttcata 182  Q
    ||||||||||||||||||||||||||||||||||||    
T  23102938 taatctatataatataaatttaggacctatttcata 23102973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 25200563 - 25200612
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||| |||||||||||  ||||||| |||||    
T  25200563 atctatataatataaatttaggatctatttcatagacttttatggaaatg 25200612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 4971324 - 4971292
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||||||||||    
T  4971324 atctatataatataaatttaggacctatttcat 4971292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 30334087 - 30334039
Alignment:
Q  150 tctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  30334087 tctatataatataaatttaggacccatttcatagacttttatggaaatg 30334039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 7782779 - 7782728
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||| |||||    
T  7782779 taatctatataatataaatttaggacccatctcatagacttttatggaaatg 7782728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 7832053 - 7832002
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||| |||||    
T  7832053 taatctatataatataaatttaggacccatctcatagacttttatggaaatg 7832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 14105026 - 14105061
Alignment:
Q  146 ataatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14105026 ataatctatataatataaatttaggacatatttcat 14105061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 33854788 - 33854820
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||| |||||||||||||    
T  33854788 atctatataatataaatttgggacctatttcat 33854820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 24202675 - 24202625
Alignment:
Q  150 tctatataatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  24202675 tctatataatataaatttaggacctatttcatagctttatatggaaatgtt 24202625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 23149332 - 23149381
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  23149332 atctatataatataaatttaggacctatttcatagacttttatggaaatg 23149381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 4212736 - 4212780
Alignment:
Q  156 taatataaatttaggacctatttcatagctttttatgaaaatgtt 200  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  4212736 taatataaatttatgacctatttcatagctttttatggaaatgtt 4212780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 10197547 - 10197496
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  10197547 taatctatataatataaatttatgacccatttcatagatttttatggaaatg 10197496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 10199032 - 10198997
Alignment:
Q  146 ataatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||||||||||||    
T  10199032 ataatctatataatataaatttaggacctatttcat 10198997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 12576904 - 12576853
Alignment:
Q  146 ataatctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||    
T  12576904 ataatctatataatataaatttaggacctatttcatgtccctttatgaaaat 12576853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 15339417 - 15339385
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||||||||||    
T  15339417 atctatataatataaatttaggacctatttcat 15339385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 18864518 - 18864486
Alignment:
Q  150 tctatataatataaatttaggacctatttcata 182  Q
    |||||||||||||||||||||||||||||||||    
T  18864518 tctatataatataaatttaggacctatttcata 18864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 30890901 - 30890851
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  30890901 aatctatataatataaatttaggatccatttcatagacttttatggaaatg 30890851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 24200948 - 24200920
Alignment:
Q  149 atctatataatataaatttaggacctatt 177  Q
    |||||||||||||||||||||||||||||    
T  24200948 atctatataatataaatttaggacctatt 24200920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 29189 - 29137
Alignment:
Q  146 ataatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  29189 ataatctatataatataaatttaggacctatttcatagacttttatggaaatg 29137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 41176 - 41225
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  41176 atctatataatataaatttaagacctatttcatagatttttatggaaatg 41225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 22157 - 22120
Alignment:
Q  143 aaaataatctatataatataaatttaggacctatttca 180  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22157 aaaataatctatataatataaatttaggacctatttca 22120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 8707 - 8658
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  8707 atctatataatataaatttaggacccatttcatagacttttatggaaatg 8658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 53001 - 53050
Alignment:
Q  148 aatctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    ||||||||||||||||||||||||||||||||||  |  |||||||||||    
T  53001 aatctatataatataaatttaggacctatttcatgcccctttatgaaaat 53050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 5847 - 5879
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||||||||||||    
T  5847 atctatataatataaatttaggacctatttcat 5879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 13457 - 13425
Alignment:
Q  148 aatctatataatataaatttaggacctatttca 180  Q
    |||||||||||||||||||||||||||||||||    
T  13457 aatctatataatataaatttaggacctatttca 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 48496 - 48463
Alignment:
Q  148 aatctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||||| |||||||||    
T  48496 aatctatataatataaatttaggaactatttcat 48463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 48750 - 48718
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||| |||||||||    
T  48750 atctatataatataaatttaggaactatttcat 48718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 53281 - 53249
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||| |||||||||    
T  53281 atctatataatataaatttaggaactatttcat 53249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 192925 - 192877
Alignment:
Q  149 atctatataatataaatttaggacctatttcatagctttttatgaaaat 197  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| ||||    
T  192925 atctatataatataaatttaggacccatttcatagacttttatggaaat 192877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 14197 - 14248
Alignment:
Q  147 taatctatataatataaatttaggacctatttcatagctttttatgaaaatg 198  Q
    ||||||||||||||||||||||||||  |||||||||  ||||||| |||||    
T  14197 taatctatataatataaatttaggactcatttcatagacttttatggaaatg 14248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 2459 - 2494
Alignment:
Q  146 ataatctatataatataaatttaggacctatttcat 181  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2459 ataatctatataatataaatttaggacatatttcat 2494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 311185 - 311219
Alignment:
Q  147 taatctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||||| ||||||||||||    
T  311185 taatctatataatataaatttatgacctatttcat 311219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 214 - 181
Alignment:
Q  148 aatctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||| |||||||||||||    
T  214 aatctatataatataaatttgggacctatttcat 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 9808 - 9840
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||| ||||||||||||    
T  9808 atctatataatataaatttaagacctatttcat 9840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 25528 - 25560
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||| ||||||||||||||    
T  25528 atctatataatataaattcaggacctatttcat 25560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 8071 - 8039
Alignment:
Q  149 atctatataatataaatttaggacctatttcat 181  Q
    |||||||||||||||||||| ||||||||||||    
T  8071 atctatataatataaatttaagacctatttcat 8039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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