View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2137_high_27 (Length: 225)

Name: NF2137_high_27
Description: NF2137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2137_high_27
NF2137_high_27
[»] chr7 (35 HSPs)
chr7 (34-210)||(11304061-11304237)
chr7 (36-210)||(23664127-23664301)
chr7 (17-210)||(14105413-14105606)
chr7 (17-210)||(14415430-14415623)
chr7 (36-210)||(29797424-29797599)
chr7 (36-210)||(29801243-29801418)
chr7 (35-176)||(12207693-12207832)
chr7 (110-200)||(17505043-17505133)
chr7 (110-200)||(17548081-17548171)
chr7 (35-176)||(12201088-12201227)
chr7 (152-210)||(16107979-16108037)
chr7 (35-126)||(7530089-7530181)
chr7 (28-178)||(15727361-15727512)
chr7 (35-134)||(39994857-39994957)
chr7 (155-210)||(18455712-18455767)
chr7 (155-210)||(39431311-39431366)
chr7 (152-210)||(1856521-1856579)
chr7 (152-210)||(13917693-13917751)
chr7 (152-210)||(25926420-25926478)
chr7 (73-129)||(14249708-14249764)
chr7 (159-210)||(4325969-4326020)
chr7 (155-206)||(13864486-13864537)
chr7 (155-210)||(16462942-16462997)
chr7 (155-210)||(23557406-23557461)
chr7 (152-200)||(11661989-11662037)
chr7 (73-129)||(14265178-14265234)
chr7 (152-199)||(13256577-13256624)
chr7 (152-199)||(14188414-14188461)
chr7 (17-64)||(15690961-15691008)
chr7 (17-64)||(15698554-15698601)
chr7 (152-195)||(42374425-42374468)
chr7 (152-210)||(13648155-13648213)
chr7 (28-96)||(16574231-16574300)
chr7 (28-96)||(16591362-16591431)
chr7 (17-65)||(15726349-15726397)
[»] chr2 (15 HSPs)
chr2 (36-210)||(13100739-13100913)
chr2 (36-210)||(10683937-10684111)
chr2 (36-210)||(20262033-20262207)
chr2 (110-210)||(23338478-23338578)
chr2 (35-134)||(25652174-25652273)
chr2 (114-200)||(20590365-20590451)
chr2 (35-185)||(24161179-24161328)
chr2 (155-199)||(43707171-43707215)
chr2 (155-210)||(22173101-22173156)
chr2 (152-210)||(41301050-41301108)
chr2 (17-96)||(23086390-23086469)
chr2 (152-210)||(31345993-31346051)
chr2 (73-134)||(22795837-22795898)
chr2 (152-200)||(21072809-21072857)
chr2 (155-198)||(7187311-7187354)
[»] chr6 (23 HSPs)
chr6 (34-210)||(12943003-12943179)
chr6 (32-210)||(28288508-28288685)
chr6 (35-173)||(9184999-9185138)
chr6 (35-134)||(18138497-18138596)
chr6 (28-178)||(1588649-1588800)
chr6 (155-210)||(14978665-14978720)
chr6 (155-210)||(20556156-20556211)
chr6 (34-120)||(21470738-21470825)
chr6 (152-210)||(13765220-13765278)
chr6 (152-210)||(23225978-23226036)
chr6 (152-210)||(23956736-23956794)
chr6 (157-210)||(25619023-25619076)
chr6 (34-120)||(25773516-25773604)
chr6 (152-210)||(23415778-23415836)
chr6 (152-210)||(31021842-31021900)
chr6 (28-96)||(1254820-1254889)
chr6 (34-89)||(21477270-21477325)
chr6 (17-47)||(25808167-25808197)
chr6 (155-200)||(611683-611728)
chr6 (28-96)||(34296187-34296256)
chr6 (17-65)||(1589764-1589812)
chr6 (29-61)||(25469700-25469732)
chr6 (17-61)||(29847263-29847307)
[»] chr5 (14 HSPs)
chr5 (34-210)||(41875595-41875771)
chr5 (36-210)||(9776979-9777153)
chr5 (34-210)||(37804075-37804251)
chr5 (35-173)||(7786093-7786229)
chr5 (17-129)||(17021897-17022010)
chr5 (35-134)||(26707324-26707423)
chr5 (35-134)||(26977058-26977157)
chr5 (28-185)||(21553384-21553541)
chr5 (152-210)||(18419325-18419383)
chr5 (152-210)||(27868695-27868753)
chr5 (152-210)||(33472684-33472742)
chr5 (155-197)||(22412973-22413015)
chr5 (28-96)||(36461032-36461101)
chr5 (17-98)||(17813468-17813551)
[»] chr3 (27 HSPs)
chr3 (34-210)||(3803687-3803863)
chr3 (34-210)||(12305936-12306112)
chr3 (36-210)||(29544038-29544212)
chr3 (35-210)||(55291605-55291780)
chr3 (36-210)||(54521636-54521810)
chr3 (54-210)||(46722609-46722765)
chr3 (35-176)||(15238969-15239108)
chr3 (110-200)||(10555190-10555280)
chr3 (35-185)||(11325049-11325199)
chr3 (49-132)||(12855006-12855090)
chr3 (28-185)||(13837039-13837196)
chr3 (152-210)||(42401-42459)
chr3 (152-210)||(5224196-5224254)
chr3 (152-210)||(13437112-13437170)
chr3 (152-210)||(15465968-15466026)
chr3 (156-210)||(24152509-24152563)
chr3 (152-210)||(43549776-43549834)
chr3 (28-96)||(11913784-11913853)
chr3 (155-199)||(50243697-50243741)
chr3 (155-210)||(6820043-6820098)
chr3 (155-210)||(16643956-16644011)
chr3 (152-210)||(10833426-10833484)
chr3 (152-210)||(16324661-16324719)
chr3 (152-210)||(26054555-26054613)
chr3 (28-96)||(51602519-51602588)
chr3 (109-176)||(15233101-15233166)
chr3 (28-96)||(30123368-30123437)
[»] chr4 (22 HSPs)
chr4 (36-210)||(36038684-36038858)
chr4 (36-210)||(15534995-15535169)
chr4 (36-210)||(49546949-49547122)
chr4 (110-200)||(16277366-16277456)
chr4 (35-176)||(32490653-32490792)
chr4 (110-200)||(53386976-53387066)
chr4 (110-199)||(33849627-33849716)
chr4 (35-185)||(15415882-15416031)
chr4 (35-132)||(15318871-15318969)
chr4 (35-185)||(16370724-16370872)
chr4 (34-116)||(15069727-15069811)
chr4 (34-120)||(15076323-15076411)
chr4 (155-210)||(23802528-23802583)
chr4 (152-210)||(28386117-28386175)
chr4 (152-200)||(45005828-45005876)
chr4 (155-210)||(12611784-12611839)
chr4 (155-210)||(13043893-13043948)
chr4 (155-210)||(15344808-15344863)
chr4 (155-210)||(15447501-15447556)
chr4 (155-210)||(51463152-51463207)
chr4 (28-200)||(18230624-18230797)
chr4 (28-96)||(56114756-56114825)
[»] scaffold0004 (1 HSPs)
scaffold0004 (35-185)||(385057-385208)
[»] chr1 (12 HSPs)
chr1 (110-210)||(297229-297329)
chr1 (34-134)||(24476279-24476380)
chr1 (34-185)||(21526784-21526933)
chr1 (34-120)||(25091418-25091505)
chr1 (155-210)||(13880660-13880715)
chr1 (73-120)||(21986077-21986124)
chr1 (152-210)||(45574140-45574198)
chr1 (152-200)||(28313232-28313280)
chr1 (75-133)||(5381568-5381626)
chr1 (31-93)||(21180277-21180339)
chr1 (152-210)||(22130146-22130204)
chr1 (155-184)||(20058382-20058411)
[»] chr8 (23 HSPs)
chr8 (35-178)||(22617542-22617684)
chr8 (155-210)||(17460331-17460386)
chr8 (155-210)||(20455860-20455915)
chr8 (155-210)||(20463068-20463123)
chr8 (155-210)||(23661170-23661225)
chr8 (152-210)||(8413869-8413927)
chr8 (152-210)||(14397031-14397089)
chr8 (28-185)||(20387386-20387542)
chr8 (152-199)||(11775598-11775645)
chr8 (152-210)||(19882821-19882879)
chr8 (160-210)||(20455124-20455174)
chr8 (160-210)||(20460838-20460888)
chr8 (152-210)||(25483562-25483620)
chr8 (73-134)||(21299350-21299411)
chr8 (28-96)||(22433609-22433678)
chr8 (73-120)||(20011291-20011338)
chr8 (17-98)||(21860517-21860600)
chr8 (17-47)||(17796267-17796297)
chr8 (34-96)||(43113015-43113077)
chr8 (36-96)||(364852-364913)
chr8 (30-67)||(14056560-14056597)
chr8 (30-67)||(25111998-25112035)
chr8 (28-96)||(42559449-42559518)
[»] scaffold0016 (2 HSPs)
scaffold0016 (35-178)||(182049-182192)
scaffold0016 (155-210)||(174232-174287)
[»] scaffold0090 (1 HSPs)
scaffold0090 (35-134)||(31449-31549)
[»] scaffold0480 (1 HSPs)
scaffold0480 (34-134)||(1419-1520)
[»] scaffold0014 (1 HSPs)
scaffold0014 (35-185)||(189630-189779)
[»] scaffold0790 (1 HSPs)
scaffold0790 (33-120)||(5421-5509)
[»] scaffold0070 (1 HSPs)
scaffold0070 (54-210)||(8964-9119)
[»] scaffold0453 (1 HSPs)
scaffold0453 (152-210)||(7131-7189)
[»] scaffold0485 (1 HSPs)
scaffold0485 (17-96)||(3738-3815)
[»] scaffold0422 (1 HSPs)
scaffold0422 (152-200)||(3847-3895)
[»] scaffold0956 (1 HSPs)
scaffold0956 (155-210)||(2219-2274)
[»] scaffold0023 (1 HSPs)
scaffold0023 (155-210)||(163207-163262)
[»] scaffold0293 (1 HSPs)
scaffold0293 (152-210)||(19420-19478)
[»] scaffold0200 (1 HSPs)
scaffold0200 (152-210)||(18467-18525)
[»] scaffold0106 (1 HSPs)
scaffold0106 (156-210)||(21857-21911)
[»] scaffold0058 (1 HSPs)
scaffold0058 (152-210)||(39933-39991)
[»] scaffold0207 (1 HSPs)
scaffold0207 (34-134)||(9606-9707)
[»] scaffold0151 (1 HSPs)
scaffold0151 (153-210)||(9968-10025)
[»] scaffold1276 (1 HSPs)
scaffold1276 (28-200)||(1023-1196)
[»] scaffold0394 (1 HSPs)
scaffold0394 (155-199)||(12934-12978)
[»] scaffold0278 (1 HSPs)
scaffold0278 (152-200)||(23839-23887)
[»] scaffold0083 (1 HSPs)
scaffold0083 (155-199)||(42181-42225)
[»] scaffold0877 (1 HSPs)
scaffold0877 (155-210)||(2151-2206)
[»] scaffold0364 (1 HSPs)
scaffold0364 (155-210)||(8037-8092)
[»] scaffold0290 (1 HSPs)
scaffold0290 (155-210)||(946-1001)
[»] scaffold0125 (1 HSPs)
scaffold0125 (155-210)||(1174-1229)
[»] scaffold0057 (1 HSPs)
scaffold0057 (155-210)||(72310-72365)
[»] scaffold0117 (1 HSPs)
scaffold0117 (152-210)||(42545-42603)
[»] scaffold0051 (1 HSPs)
scaffold0051 (152-210)||(32016-32074)
[»] scaffold0001 (2 HSPs)
scaffold0001 (152-210)||(169313-169371)
scaffold0001 (152-210)||(176666-176724)
[»] scaffold0599 (1 HSPs)
scaffold0599 (28-96)||(1060-1129)
[»] scaffold0046 (1 HSPs)
scaffold0046 (75-120)||(71510-71555)
[»] scaffold0112 (1 HSPs)
scaffold0112 (155-199)||(23247-23291)
[»] scaffold0069 (1 HSPs)
scaffold0069 (17-65)||(35528-35576)
[»] scaffold0049 (2 HSPs)
scaffold0049 (73-129)||(42111-42167)
scaffold0049 (73-129)||(52806-52862)
[»] scaffold0026 (1 HSPs)
scaffold0026 (73-133)||(36502-36562)
[»] scaffold1439 (1 HSPs)
scaffold1439 (155-210)||(949-1004)
[»] scaffold0371 (1 HSPs)
scaffold0371 (30-93)||(8516-8579)
[»] scaffold0071 (1 HSPs)
scaffold0071 (28-93)||(51991-52058)
[»] scaffold0334 (1 HSPs)
scaffold0334 (152-210)||(1998-2056)
[»] scaffold0607 (1 HSPs)
scaffold0607 (17-88)||(3788-3861)
[»] scaffold0192 (1 HSPs)
scaffold0192 (73-134)||(21780-21841)
[»] scaffold0061 (1 HSPs)
scaffold0061 (73-134)||(56391-56452)
[»] scaffold0028 (1 HSPs)
scaffold0028 (75-120)||(91779-91824)
[»] scaffold0017 (1 HSPs)
scaffold0017 (73-134)||(142181-142242)
[»] scaffold0011 (1 HSPs)
scaffold0011 (17-93)||(20784-20858)
[»] scaffold0008 (1 HSPs)
scaffold0008 (75-120)||(124108-124153)
[»] scaffold0413 (1 HSPs)
scaffold0413 (28-64)||(11680-11716)
[»] scaffold0104 (1 HSPs)
scaffold0104 (73-129)||(40834-40890)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 11304237 - 11304061
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11304237 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 11304138  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11304137 ttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaat 11304061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 23664127 - 23664301
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664127 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 23664226  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  23664227 ggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaat 23664301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 14105413 - 14105606
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattggg 116  Q
    |||||||||||||||||||||||||||||||   |  |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  14105413 agttctgtccttcaatctaaggtaagggtgatgtttactctcaatgataatggttatataattctaattttggtttagaatagttctagctgaaattggg 14105512  T
Q  117 aattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||    
T  14105513 aattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaat 14105606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 14415430 - 14415623
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattggg 116  Q
    |||||||||||||||||||||||||||||||   |  |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  14415430 agttctgtccttcaatctaaggtaagggtgatgtttactctcaatgataatggttatataattctaattttggtttagaatagttctagctgaaattggg 14415529  T
Q  117 aattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||    
T  14415530 aattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaat 14415623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 29797599 - 29797424
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggt-ttt 134  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||    
T  29797599 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagctgaaattgggaattgggggttaggttttt 29797500  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||| ||||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||    
T  29797499 tggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaat 29797424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 29801418 - 29801243
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggt-ttt 134  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||    
T  29801418 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagctgaaattgggaattgggggttaggttttt 29801319  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||| ||||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||    
T  29801318 tggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaat 29801243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 12207693 - 12207832
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  12207693 aaggtaagggtgagactaactctcaatgataatggttgtacaattctgattttggtttagcaaggttctagttgaaattgggaattgggggttaggtttt 12207792  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggca 176  Q
      ||||||  || ||| ||| || ||||||||| ||||||||    
T  12207793 --gagtatgctttttgaattaaagagtgtagaatccatggca 12207832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 17505043 - 17505133
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17505043 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcag 17505133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 17548171 - 17548081
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17548171 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcag 17548081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 12201088 - 12201227
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| ||||||||| |||| ||| || |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  12201088 aaggtaagggtgagactaactctcaatggtaatagttgtacaattctgattttggtttagcaagattctagttgaaattgggaattgggggttaggtttt 12201187  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggca 176  Q
      |||||| ||| ||  ||| || ||||||||| ||||||||    
T  12201188 --gagtatgatttttcaattaaagagtgtagaatccatggca 12201227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 16107979 - 16108037
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||    
T  16107979 attgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaat 16108037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 7530181 - 7530089
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggt 126  Q
    ||||||||||||| |||| |||||||||||||  ||| |||| ||||||||||| |||||| | ||||||||||||| |||| ||||||||||    
T  7530181 aaggtaagggtgagactaactctcaatgataacagttgtatacttctgattttgatttagcaagagttctagttgaatttggaaattgggggt 7530089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 15727361 - 15727512
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggt-tatataattctgattttggtttagcata--gttctagttgaaattgggaattgggg 124  Q
    |||||||||||||||||||| |||| ||||||||||| || || |||||||||||||| ||| |||| || |  ||||||||| || |||||| ||| ||    
T  15727361 tcaatctaaggtaagggtgagactaactctcaatgattatagtctatataattctgatgttgatttaacaaagggttctagtt-aatttgggatttgagg 15727459  T
Q  125 gttaggtttttggagtat-cattcttgtattgaaaagtgtagaaaccatggcaat 178  Q
     |||||||||  || |||  ||| ||| |||||||||||||||||||||| ||||    
T  15727460 tttaggtttt--gattatagatttttgaattgaaaagtgtagaaaccatgacaat 15727512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 39994857 - 39994957
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||| ||||| |||| |||||||||||||| ||| |||| ||||||||||| |||| | |  |||||||||||| |||| |||| ||||||||||||    
T  39994857 aaggtaaaggtgagactaactctcaatgataatagttctatacttctgattttgatttaacaagggttctagttgaatttggaaattaggggttaggttt 39994956  T
Q  134 t 134  Q
    |    
T  39994957 t 39994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 18455712 - 18455767
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  18455712 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 18455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 39431311 - 39431366
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||    
T  39431311 gaaaagtgtagaaaccatgtcaattgtgttaagaattgatgttcaggttgtagaat 39431366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 1856521 - 1856579
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  1856521 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 1856579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 13917693 - 13917751
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  13917693 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 13917751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 25926420 - 25926478
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  25926420 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 25926478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 14249708 - 14249764
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttag 129  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||||| ||| ||||    
T  14249708 tataattctgattttggtttaacatagttctggttaaaattgggaatttgggtttag 14249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 4326020 - 4325969
Alignment:
Q  159 agtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||| |||||||||||||||| |||||||||  ||||||||    
T  4326020 agtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaat 4325969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 13864486 - 13864537
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgta 206  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||| ||||    
T  13864486 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcagattgta 13864537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 16462997 - 16462942
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||  ||||||||    
T  16462997 gaaatgtgtagaaacgatggcaattgtgttaagaattgatgttcaggttgtagaat 16462942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 23557461 - 23557406
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||  ||||||||    
T  23557461 gaaaagtgtagaaaccatgacaattgtgttatgaattgatgttcaggttgtagaat 23557406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 11662037 - 11661989
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  11662037 attgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcag 11661989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 14265178 - 14265234
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttag 129  Q
    ||||||||||||||| ||||| ||||||||| ||| |||||||||||| ||| ||||    
T  14265178 tataattctgattttagtttaacatagttctggttaaaattgggaatttgggtttag 14265234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 13256624 - 13256577
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    ||||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  13256624 attgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttca 13256577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 14188414 - 14188461
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    ||||||| ||||||||||||| | ||||||||||||||| ||||||||    
T  14188414 attgaaatgtgtagaaaccatcgaaattgtgttaagaattgatgttca 14188461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 15691008 - 15690961
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgat 64  Q
    |||||||||||||||||||||||||||||||   || |||||||||||    
T  15691008 agttctgtccttcaatctaaggtaagggtgaggttaactctcaatgat 15690961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 15698601 - 15698554
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgat 64  Q
    |||||||||||||||||||||||||||||||   || |||||||||||    
T  15698601 agttctgtccttcaatctaaggtaagggtgaggttaactctcaatgat 15698554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 42374425 - 42374468
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatg 195  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||    
T  42374425 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatg 42374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 13648213 - 13648155
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||| ||  ||||||||    
T  13648213 attgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaat 13648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 16574300 - 16574231
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||| | || | |||||||||||||||| || |||||||    
T  16574300 tcaatctaaggtaagggtgaggctaactctcaatggttatagtttatataattctgattctgttttagca 16574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 16591362 - 16591431
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||| | || | |||||||||||||||| || |||||||    
T  16591362 tcaatctaaggtaagggtgaggctaactctcaatggttatagtttatataattctgattctgttttagca 16591431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 15726397 - 15726349
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgata 65  Q
    |||| ||| ||||||||||||||||||||||  ||| ||||||||||||    
T  15726397 agttttgttcttcaatctaaggtaagggtgaggctaactctcaatgata 15726349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 8e-85; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 13100739 - 13100913
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13100739 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgtgaattgggggttaggttttt 13100838  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13100839 ggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 13100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 10683937 - 10684111
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10683937 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 10684036  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  10684037 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaat 10684111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 20262207 - 20262033
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20262207 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 20262108  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  20262107 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaat 20262033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 23338478 - 23338578
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaa 209  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23338478 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaa 23338577  T
Q  210 t 210  Q
    |    
T  23338578 t 23338578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 25652273 - 25652174
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||  |||| |||||||||||||| |||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  25652273 aaggtaagggtgggactaactctcaatgataatagttatacaattctgattttggtttagcaagattctagttgaaattgggaattgggggttaggtttt 25652174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 20590365 - 20590451
Alignment:
Q  114 gggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20590365 gggaattgggggttaggttttgggagtatgattattggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcag 20590451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 24161328 - 24161179
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| |||||||||||||| ||| |||| ||||||||||| |||||| |  |||||||||||| |||| ||||||||||||| |||    
T  24161328 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttgatttagcaagggttctagttgaatttggaaattgggggttagattt 24161229  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |  || ||| ||| ||| ||| || |||||| ||||||||||||| ||||||    
T  24161228 t--gattatgatttttgaattaaagagtgtaaaaaccatggcaatggtgtta 24161179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 43707171 - 43707215
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  43707171 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttca 43707215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 22173101 - 22173156
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  22173101 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 22173156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 41301050 - 41301108
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  41301050 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 41301108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 23086469 - 23086390
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagca 96  Q
    |||| ||| ||| ||||||||||||||||||  ||| ||||||||||| || | | |||||||||||||||| |||||||    
T  23086469 agttttgttctttaatctaaggtaagggtgaggctaactctcaatgattatagatgtataattctgattttgatttagca 23086390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 31346051 - 31345993
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| || ||||||    
T  31346051 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaat 31345993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 22795837 - 22795898
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||||||||||| | ||||||| || ||||||||||||| |||  ||||||||    
T  22795837 tataattctgattttggtttaacctagttctggtagaaattgggaatttgggtctaggtttt 22795898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 21072809 - 21072857
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  21072809 attgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcag 21072857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 7187354 - 7187311
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttc 198  Q
    |||||||||||||||||||  ||||||||||||||| |||||||    
T  7187354 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttc 7187311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 12943179 - 12943003
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12943179 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 12943080  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  12943079 ttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaat 12943003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 32 - 210
Target Start/End: Original strand, 28288508 - 28288685
Alignment:
Q  32 tctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggt 131  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28288508 tctaaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttagg- 28288606  T
Q  132 ttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  28288607 ttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaat 28288685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 173
Target Start/End: Original strand, 9184999 - 9185138
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataa-ttctgattttggtttagcatagttctagttgaaatt-gggaattgggggttaggtt 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||| || |||| | ||||||| |    
T  9184999 aaggtaagggtgagactatctctcaatgataatggttatataatttctgattttggtttagcaaggttctagttgaaattaggaaattagaggttagg-t 9185097  T
Q  133 tttggagtatcattcttgtattgaaaagtgtagaaaccatg 173  Q
    |||||||||| ||| ||| ||| |||||||||||| |||||    
T  9185098 tttggagtatgatttttgaattaaaaagtgtagaatccatg 9185138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 18138596 - 18138497
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctga-ttttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  18138596 aaggtaaaggtgagactatctctcaatgataatggttatataattctgatttttggtttagcatagttccagttgaaattgagaatt-ggggttaggttt 18138498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 1588800 - 1588649
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggt-tatataattctgattttggtttagcata--gttctagttgaaattgggaattgggg 124  Q
    |||||||||||||||||||| |||| ||||||||||| || || |||||||||||||| ||| |||| || |  ||||||||| || |||||| ||| ||    
T  1588800 tcaatctaaggtaagggtgagactaactctcaatgattatagtctatataattctgatgttgatttaacaaagggttctagtt-aatttgggatttgagg 1588702  T
Q  125 gttaggtttttggagtat-cattcttgtattgaaaagtgtagaaaccatggcaat 178  Q
     |||||||||  || |||  ||| ||| |||||||||||||||||||||| ||||    
T  1588701 tttaggtttt--gattatagatttttgaattgaaaagtgtagaaaccatgacaat 1588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 14978665 - 14978720
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  14978665 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 14978720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 20556156 - 20556211
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  20556156 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 20556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 21470825 - 21470738
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttgg-tttagcatagttctagttgaaattgggaatt 120  Q
    |||||||| ||||| ||||||| ||||   ||||| |||||||||| ||||||||| |||||||||||||| || |||||||||||||    
T  21470825 taaggtaatggtgagactatctttcaacattaatgattatataattttgattttgggtttagcatagttctggtagaaattgggaatt 21470738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 13765278 - 13765220
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  13765278 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 13765220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 23225978 - 23226036
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  23225978 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 23226036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 23956794 - 23956736
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  23956794 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 23956736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 25619023 - 25619076
Alignment:
Q  157 aaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  25619023 aaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 25619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 25773604 - 25773516
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt--ggtttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||| |||| ||||||| ||||   ||||| |||||||| |||||||||  |||||||||||||||| || |||||||||||||    
T  25773604 taaggtaagagtgagactatctttcaacattaatgattatataagtctgatttttgggtttagcatagttctggtagaaattgggaatt 25773516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 23415836 - 23415778
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  23415836 attgaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 23415778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 31021842 - 31021900
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||| || | ||||||||||||||| |||||||||  ||||||||    
T  31021842 attgaaaagtgtagaaactatcgaaattgtgttaagaattgatgttcaggttgtagaat 31021900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 1254889 - 1254820
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || | || |||||||||||||||| |||||||    
T  1254889 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttagca 1254820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 21477325 - 21477270
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttgg 89  Q
    |||||||||||||| ||||||| ||||   ||||| ||||||||||||||||||||    
T  21477325 taaggtaagggtgagactatctttcaacattaatgattatataattctgattttgg 21477270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 25808197 - 25808167
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtga 47  Q
    |||||||||||||||||||||||||||||||    
T  25808197 agttctgtccttcaatctaaggtaagggtga 25808167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 611728 - 611683
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||| ||||||||||| ||||  ||||||||    
T  611728 gaaaagtgtagaaaccatgacaattgtgttaggaattaatgttcag 611683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 34296187 - 34296256
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||   || ||||||||||| || | || |||||||||||||||| |||||||    
T  34296187 tcaatctaaggtaagggtgaggttaactctcaatgattatagtttgtataattctgattttgatttagca 34296256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 1589764 - 1589812
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgata 65  Q
    |||| ||| ||||||||||||||||||||||  ||| ||||||||||||    
T  1589764 agttttgttcttcaatctaaggtaagggtgaggctaactctcaatgata 1589812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 25469700 - 25469732
Alignment:
Q  29 caatctaaggtaagggtgaaactatctctcaat 61  Q
    ||||||||||||||||||| |||||||||||||    
T  25469700 caatctaaggtaagggtgagactatctctcaat 25469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 29847263 - 29847307
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaat 61  Q
    |||| ||||||||||||||||||||||||||  ||| ||||||||    
T  29847263 agttatgtccttcaatctaaggtaagggtgaggctaactctcaat 29847307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 41875595 - 41875771
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41875595 taaggtaagggtgagactctctctcattgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 41875694  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41875695 ttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 41875771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 9777153 - 9776979
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9777153 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 9777054  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||    
T  9777053 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattatgttaagaatcgatgttcagattgtagaat 9776979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 37804075 - 37804251
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37804075 taaggtaagggcgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagtagaaattgggaattgggggttaggttt 37804174  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  37804175 ttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaat 37804251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 7786229 - 7786093
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  7786229 aaggtaagggtgagactaactctcaatgataatggttatacaattctaattttggtttagcagggttccagttgaaattgggaattgggggttaggtttt 7786130  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatg 173  Q
      |||||| ||| ||| ||| || ||||||||| |||||    
T  7786129 --gagtatgatttttgaattaaagagtgtagaatccatg 7786093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 17021897 - 17022010
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttgg-tttagcatagttctagttgaaattgg 115  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||| |||||||||||||| ||| |||||||    
T  17021897 agttctgtccttcaatctaaggtaagggtgagactatctctcaatagtaatggttgtataattctgattttggatttagcatagttctggttaaaattgg 17021996  T
Q  116 gaattgggggttag 129  Q
    ||||| ||| ||||    
T  17021997 gaatttgggtttag 17022010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 26707423 - 26707324
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| ||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  26707423 aaggtaagggtgagactaactctcaatggtaatggttatacaactctgattttggtttagcaaggttctagttgaaattgggaattgggagttaggtttt 26707324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 26977157 - 26977058
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| ||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  26977157 aaggtaagggtgagactaactctcaatggtaatggttatacaactctgattttggtttagcaaggttctagttgaaattgggaattgggagttaggtttt 26977058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 21553384 - 21553541
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggt-tatataattctgattttggtttagca--tagttctagttgaaattgggaattgggg 124  Q
    ||||||||||||||||||||  ||| ||||||||| | || || |||||||||||||||||| |||||||    ||||| ||| |||||||||||| |||    
T  21553384 tcaatctaaggtaagggtgaggctaactctcaatggttatagtctatataattctgattttgttttagcaaggggttctggtt-aaattgggaatt-ggg 21553481  T
Q  125 gttaggtttttggagta-tcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
     |||||||||  ||  | | ||| ||| |||||||||||||||||||||| |||||||||||    
T  21553482 tttaggtttt--gatcattgatttttgaattgaaaagtgtagaaaccatgacaattgtgtta 21553541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 18419383 - 18419325
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  18419383 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 18419325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 27868695 - 27868753
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  27868695 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 27868753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 33472684 - 33472742
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  33472684 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 33472742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 22413015 - 22412973
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgtt 197  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  22413015 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgtt 22412973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 36461101 - 36461032
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || | || |||||||||||||||| |||||||    
T  36461101 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttagca 36461032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 17813551 - 17813468
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataa-ttctgattttggtttagcata 98  Q
    |||| ||| |||||||| ||||||||||||| |||| ||||||||||| || | |||||||| ||||||||||| |||| ||||    
T  17813551 agttttgttcttcaatcaaaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgatttaacata 17813468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 3803863 - 3803687
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3803863 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 3803764  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  3803763 ttggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaat 3803687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 12306112 - 12305936
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12306112 taaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 12306013  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  12306012 ttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaat 12305936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 29544038 - 29544212
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29544038 aggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 29544137  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    || |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  29544138 ggggtatgattcttggattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaat 29544212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 55291605 - 55291780
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  55291605 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggtttt 55291704  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
     ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  55291705 gggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaat 55291780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 54521810 - 54521636
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  54521810 aggtaagggtgagactatctctcaaggataatggttatataattctgatcttggtttagcatagttctagttgaaattggaaattgagggttaggttttt 54521711  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  54521710 ggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaat 54521636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 46722609 - 46722765
Alignment:
Q  54 ctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatcattcttgtat 153  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||    
T  46722609 ctctcaatgataatggttatataattctgattttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggat 46722708  T
Q  154 tgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||||  ||||||||    
T  46722709 tgaaaagtgtggaaactatggcaattgtgttaagaattgatgttcaggttgtagaat 46722765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 15239108 - 15238969
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  15239108 aaggtaagggtgagactaactctcaatgataatggttatacaattctgattttggtttagcaaggttctagttaaaattgggaattgggggttaggtttt 15239009  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggca 176  Q
      |||||| ||| ||| ||| || ||||||||| ||||||||    
T  15239008 --gagtatgatttttgaattaaagagtgtagaatccatggca 15238969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 10555280 - 10555190
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10555280 aattgggaattggggtttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcag 10555190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 11325049 - 11325199
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcata-gttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| ||||||||| |||| ||| |||| ||||||||||| |||| || | |||||||||||| |||| || ||||||||||||||    
T  11325049 aaggtaagggtgagactaactctcaatgttaatagttctatacttctgattttgatttaacaaaggttctagttgaatttggaaaatgggggttaggttt 11325148  T
Q  134 ttggagtatca-ttcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |  || ||| | || ||| |||||| |||||||||||||||||||| ||||||    
T  11325149 t--gactatgattttttgaattgaagagtgtagaaaccatggcaatagtgtta 11325199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 12855006 - 12855090
Alignment:
Q  49 actatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaa-ttgggggttaggtt 132  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||| || || |||| |||||||||    
T  12855006 actatctctcaatgataatggttatacaattctgattttgatttaacaaagttctagttgaaataggaaatttggaggttaggtt 12855090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 13837196 - 13837039
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggt-tatataattctgattttggtttagc-atagttctagttgaaattgggaattggggg 125  Q
    |||||||||||||||||||| |||| ||||||||||| || || | |||||||||||||||| |||||| |  ||||| ||| ||||| |||| | |||     
T  13837196 tcaatctaaggtaagggtgagactaactctcaatgattatagtctgtataattctgattttgttttagcaagggttctggtt-aaatttggaaattggga 13837098  T
Q  126 ttaggtttttggagta-tcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |||||||||  || || | ||| ||| |||||| ||||||||||||||| |||||||||||    
T  13837097 ttaggtttt--gaatattaatttttgaattgaagagtgtagaaaccatgacaattgtgtta 13837039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 42459 - 42401
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  42459 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 42401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 5224254 - 5224196
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  5224254 attgaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaat 5224196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 13437170 - 13437112
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||||  ||||||||    
T  13437170 attgaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaat 13437112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 15466026 - 15465968
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  15466026 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 15465968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 24152509 - 24152563
Alignment:
Q  156 aaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  24152509 aaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 24152563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 43549776 - 43549834
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  43549776 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 43549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 11913853 - 11913784
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || |||| |||||||||||||||| |||||||    
T  11913853 tcaatctaaggtaagggtgaggctaactctcaatgattataggttgtataattctgattttgatttagca 11913784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 50243741 - 50243697
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  50243741 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttca 50243697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 6820098 - 6820043
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||  ||||||||    
T  6820098 gaaaagtgtagaaactatgtcaattgtgttaagaattgatgttcaggttgtagaat 6820043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 16644011 - 16643956
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||  ||||||||    
T  16644011 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaat 16643956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 10833426 - 10833484
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||| |||| || |||||    
T  10833426 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaat 10833484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 16324661 - 16324719
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||| |||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  16324661 attggaaagtgtagaaaccattgaaattgtgttaagaattgatgttcaggttgtagaat 16324719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 26054555 - 26054613
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||| |||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  26054555 attgaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 26054613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 51602519 - 51602588
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || | || |||||||||||||||| |||||||    
T  51602519 tcaatctaaggtaagggtgaggctaactctcaatgattatagattgtataattctgattttgatttagca 51602588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 15233166 - 15233101
Alignment:
Q  109 aaattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggca 176  Q
    ||||||||||||||||||||||||||  |||||| ||| ||| ||| || ||||||||| ||||||||    
T  15233166 aaattgggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatggca 15233101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 30123368 - 30123437
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    |||||||||||||||| |||  ||| ||||||||||| || | || |||||||||||||||| |||||||    
T  30123368 tcaatctaaggtaaggttgaggctaactctcaatgattatagtttgtataattctgattttgatttagca 30123437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 5e-80; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 36038858 - 36038684
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36038858 aggtaagggtgagactatctctcaatggtaatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 36038759  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  36038758 ggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaat 36038684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 15535169 - 15534995
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15535169 aggtaagggtgagactatctctcaatgataatggttatataattctgattttgatttagcatagttctagttgaaattgggaattgggggttaggttttt 15535070  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  15535069 ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaat 15534995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 49546949 - 49547122
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49546949 aggtaagggtgagactatctctcaatgataatggttatataattctgatcttggtttagcatagttctagttgaaattgggaattgggggttaggttttt 49547048  T
Q  136 ggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49547049 ggagta-cgatcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaat 49547122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 16277366 - 16277456
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16277366 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcag 16277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 32490792 - 32490653
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||| ||||||||  ||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  32490792 aaggtaagggtgagactaactctcaatagtaatggttatacaattctgattttgatttagcaaggttctagttgaaattgggaattgggggttaggtttt 32490693  T
Q  135 tggagtatcattcttgtattgaaaagtgtagaaaccatggca 176  Q
      |||||| ||| ||| ||| || ||||||||| ||||||||    
T  32490692 --gagtatgatttttgaattaaagagtgtagaatccatggca 32490653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 53386976 - 53387066
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53386976 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcag 53387066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 33849716 - 33849627
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  33849716 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttca 33849627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 15415882 - 15416031
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| |||||||||||||| ||| |||| ||||||||||| |||||| |  |||||||||||| |||||| |||||||||||||||    
T  15415882 aaggtaagggtgagactaactctcaatgataatagttctatacttctgattttgatttagcaagggttctagttgaatttgggatttgggggttaggttt 15415981  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |  || ||| ||| ||| |||||||||||||||| |||||||||| ||||||    
T  15415982 t--gattatgatttttgaattgaaaagtgtagaatccatggcaatagtgtta 15416031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 15318969 - 15318871
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaa-ttgggggttaggtt 132  Q
    ||||||||||||| ||||||||||||||||| ||||| || ||||||||||||| |||| || ||||||||||||||||||||| ||| ||||||||||    
T  15318969 aaggtaagggtgagactatctctcaatgatattggttctacaattctgattttgatttaacaaagttctagttgaaattgggaatttgcgggttaggtt 15318871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 16370724 - 16370872
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatag-ttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| |||||||||||||| ||  |||| ||||||||||| |||||||  | ||||||||||| |||| |||||||||||||||||    
T  16370724 aaggtaagggtgagactaactctcaatgataatagtg-tatacttctgattttgatttagcaagggttctagttgaatttggaaattgggggttaggttt 16370822  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |  || ||| ||| ||| |||||| ||||||||||| |||||||| ||||||    
T  16370823 t--gattatgatttttgaattgaagagtgtagaaactatggcaatggtgtta 16370872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 15069811 - 15069727
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt--ggtttagcatagttctagttgaaattggg 116  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||||||||||  |||||||||||||| |||| |||||||||    
T  15069811 taaggtaagggtgagactatctctcaataatgatggttatgtaattctgatttttgggtttagcatagttatagtagaaattggg 15069727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 15076411 - 15076323
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt--ggtttagcatagttctagttgaaattgggaatt 120  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||||||||||  | ||||||||||||||||| |||||| ||||||    
T  15076411 taaggtaagggtgagactatctctcaataatgatggttatgtaattctgatttttggatttagcatagttctagtagaaatttggaatt 15076323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 23802528 - 23802583
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  23802528 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 23802583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 28386175 - 28386117
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  28386175 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 28386117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 45005876 - 45005828
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  45005876 attgaaaagtgtagaaaccattgaaattgtgttaagaattgatgttcag 45005828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 12611839 - 12611784
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||  ||||||||    
T  12611839 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaat 12611784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 13043893 - 13043948
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  13043893 gaaaagtgtagaaaccatagtaattgtgttaagaattgatgttcaggttgtagaat 13043948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 15344863 - 15344808
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||  ||||||||    
T  15344863 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcaggttgtagaat 15344808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 15447501 - 15447556
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||  ||||||||    
T  15447501 gaaaagtgcagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaat 15447556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 51463152 - 51463207
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||  ||||||||    
T  51463152 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaat 51463207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 18230797 - 18230624
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggtta-tataattctgattttggtttagcatag--ttctagttgaaattgggaattgggg 124  Q
    ||||||||||||||||||||  ||| ||||||||||| || |||  ||| |||||||||||| |||| ||  |  || | ||| || ||||||||||||     
T  18230797 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtatgattctgattttgatttaacaaggggttgtggttaaatttgggaattggga 18230698  T
Q  125 gttaggtttttggagtatc-attcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
     |||||||||  || |||  ||| ||| ||||||||||||||||| ||| | ||||||||||||||| |||||||||    
T  18230697 -ttaggtttt--gattattgatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcag 18230624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 56114756 - 56114825
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || | || |||||||||||||||| |||||||    
T  56114756 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttagca 56114825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 385208 - 385057
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  385208 aaggtaagggtgagactatctctcaatgataatggttatataattctgattttggtttagcatagttctagttgaaattgggaattggggattaggtttt 385109  T
Q  135 tggagtatcattcttgtattgaaaa-gtgtagaaaccatggcaattgtgtta 185  Q
    |||||||| ||| ||| |||||||| ||||||| ||||| | ||| ||||||    
T  385108 tggagtatgatttttggattgaaaaggtgtagagaccattgtaatagtgtta 385057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 297329 - 297229
Alignment:
Q  110 aattgggaattgggggttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaa 209  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  297329 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaa 297230  T
Q  210 t 210  Q
    |    
T  297229 t 297229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 24476380 - 24476279
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt-ggtttagcatagttctagttgaaattgggaattgggggttaggtt 132  Q
    |||||||||||||| ||||||||||||| || |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||| ||    
T  24476380 taaggtaagggtgagactatctctcaataatgatggttatgtaattctgattttgggtttagcatagttctagtagaaattgggaatttgggtttagatt 24476281  T
Q  133 tt 134  Q
    ||    
T  24476280 tt 24476279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 185
Target Start/End: Original strand, 21526784 - 21526933
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagca-tagttctagttgaaattgggaattgggggttaggtt 132  Q
    |||||||||||||| | || ||||||||||| || ||  |||| ||||||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  21526784 taaggtaagggtgagaataactctcaatgatgatagtg-tatacttctgattttggtttagcaatggttctagttgaaattgagaattgggggttaggtt 21526882  T
Q  133 tttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    ||  || ||| ||| ||| ||| || |||| |||| |||||||||| ||||||    
T  21526883 tt--gattatgatttttgaattaaagagtgaagaatccatggcaatagtgtta 21526933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 25091418 - 25091505
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt-ggtttagcatagttctagttgaaattgggaatt 120  Q
    |||||||||||||| ||||||||||||| |||| |||||| | ||||||||||| ||||||||||||||||||| | |||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataataacggttatgtgattctgattttgggtttagcatagttctagtagtaattgggaatt 25091505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 13880660 - 13880715
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  13880660 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 13880715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 21986077 - 21986124
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  21986077 tataattctgattttggtttaacatagttctggttaaaattgggaatt 21986124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 45574140 - 45574198
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||| ||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  45574140 attgaaaagtgcagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 45574198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 28313280 - 28313232
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  28313280 attgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcag 28313232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 5381626 - 5381568
Alignment:
Q  75 taattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||| |||  |||||||    
T  5381626 taattctgattttggtttaacatgtttctggttgaaattgggaatttgggtctaggttt 5381568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 21180277 - 21180339
Alignment:
Q  31 atctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggttta 93  Q
    ||||||||||||||||| |||| ||||||||||| || | | ||| |||||||||||| ||||    
T  21180277 atctaaggtaagggtgagactaactctcaatgattatagatgtatgattctgattttgattta 21180339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 22130146 - 22130204
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||||   ||||||||||||||| |||||| ||  ||||||||    
T  22130146 attgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaat 22130204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 184
Target Start/End: Complemental strand, 20058411 - 20058382
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgtt 184  Q
    ||||||||||||||||||||||||||||||    
T  20058411 gaaaagtgtagaaaccatggcaattgtgtt 20058382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 178
Target Start/End: Complemental strand, 22617684 - 22617542
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| |||||||||||||| ||| |||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  22617684 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaagggttctagttgaaattgggaattgggggttaggttt 22617585  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaat 178  Q
    |  || | | ||| ||| ||| || ||||||||||||||||||||    
T  22617584 t--gattttgatttttgaattaaagagtgtagaaaccatggcaat 22617542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 17460331 - 17460386
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  17460331 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 17460386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 20455915 - 20455860
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  20455915 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 20455860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 20463123 - 20463068
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  20463123 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 20463068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 23661225 - 23661170
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  23661225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 23661170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 8413869 - 8413927
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  8413869 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 8413927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 14397031 - 14397089
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  14397031 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 14397089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 20387542 - 20387386
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagca--tagttctagttgaaattgggaattggggg 125  Q
    ||||||||||||||||||||  ||| ||||||||  | |||||| |||||||||||||||| |||||||    ||||| ||| || ||||||||| |||     
T  20387542 tcaatctaaggtaagggtgaggctaactctcaatagttatggttgtataattctgattttgatttagcaaggggttctggttaaatttgggaatt-ggga 20387444  T
Q  126 ttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |||||||||  |    | ||| ||| |||||||||||||||||||||| |||| ||||||    
T  20387443 ttaggtttt--gttattgatttttgaattgaaaagtgtagaaaccatgacaatagtgtta 20387386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 11775645 - 11775598
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  11775645 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca 11775598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 19882879 - 19882821
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||| ||| |||||||||  ||||||||    
T  19882879 attgaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaat 19882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 20455174 - 20455124
Alignment:
Q  160 gtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  20455174 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 20455124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 20460888 - 20460838
Alignment:
Q  160 gtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  20460888 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 20460838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 25483562 - 25483620
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||| ||  ||||||||    
T  25483562 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaat 25483620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 21299350 - 21299411
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||||||||||| | ||||||| || ||||||||||||| |||  ||||||||    
T  21299350 tataattctgattttggtttaacctagttctggtagaaattgggaatttgggtctaggtttt 21299411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 22433609 - 22433678
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggt-tatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || || | |||||||||||||||| |||||||    
T  22433609 tcaatctaaggtaagggtgaggctaactctcaatgattatagtctgtataattctgattttgttttagca 22433678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 20011291 - 20011338
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||||||||||||||| | ||||||| || |||||||||||||    
T  20011291 tataattctgattttggtttaacttagttctggtagaaattgggaatt 20011338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 21860517 - 21860600
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataa-ttctgattttggtttagcata 98  Q
    |||| ||| |||||||| ||||||||||||| |||| ||||||||||| || | |||||||| ||||||||||| |||| ||||    
T  21860517 agttttgttcttcaatcaaaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgatttaacata 21860600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 17796297 - 17796267
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtga 47  Q
    |||||||||||||||||||||||||||||||    
T  17796297 agttctgtccttcaatctaaggtaagggtga 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 43113077 - 43113015
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagca 96  Q
    ||||||||||||||  ||| ||||||||||| || ||| ||||||||||||| || |||||||    
T  43113077 taaggtaagggtgaggctaactctcaatgattatagttttataattctgattatgttttagca 43113015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 364913 - 364852
Alignment:
Q  36 aggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    |||||||||||| |||| ||||||||||| || | || |||||||||||||||| |||||||    
T  364913 aggtaagggtgagactaactctcaatgattatagtttgtataattctgattttgatttagca 364852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 14056560 - 14056597
Alignment:
Q  30 aatctaaggtaagggtgaaactatctctcaatgataat 67  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  14056560 aatctaaggtaagggtgagactatctctcaataataat 14056597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 25112035 - 25111998
Alignment:
Q  30 aatctaaggtaagggtgaaactatctctcaatgataat 67  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  25112035 aatctaaggtaagggtgagactatctctcaataataat 25111998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 42559449 - 42559518
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || | || ||||||| |||||||| |||||||    
T  42559449 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattatgattttgatttagca 42559518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 35 - 178
Target Start/End: Original strand, 182049 - 182192
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagcata-gttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| |||||||||||||| ||| |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  182049 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaaaggttctagttgaaattgggaagtgggggttaggttt 182148  T
Q  134 ttggagtatca-ttcttgtattgaaaagtgtagaaaccatggcaat 178  Q
    |  || ||| | || ||| ||| |||||||||||| ||||||||||    
T  182149 t--gattatgattttttgaattaaaaagtgtagaatccatggcaat 182192  T

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Target: scaffold0016; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 174232 - 174287
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||||  ||||||||    
T  174232 gaaaagtgtagaaaccatgacaattgtgttaagaattgatggtcaggttgtagaat 174287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 31449 - 31549
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| |||| |||||||||||||| ||| |||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  31449 aaggtaagggtgagactaactctcaatgataatagttgtatacttctgattttggtttagcaagggttctagttgaaattgggaattgggggttaggttt 31548  T
Q  134 t 134  Q
    |    
T  31549 t 31549  T

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Target: scaffold0480 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 1520 - 1419
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt-ggtttagcatagttctagttgaaattgggaattgggggttaggtt 132  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||| |||||||||||| ||||||||||||| ||| |||| ||    
T  1520 taaggtaagggtgagactatctctcaatgataatggttatgttattctgattttgggtttaacatagttctagtagaaattgggaatttgggtttagatt 1421  T
Q  133 tt 134  Q
    ||    
T  1420 tt 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 189779 - 189630
Alignment:
Q  35 aaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagc-atagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||| || | |||||||||||||| ||| |||| ||||||||||| |||| | |  |||||||||||| |||| || ||||||||||||||    
T  189779 aaggtaagggtgagaccaactctcaatgataatagttctatacttctgattttgatttaacaagggttctagttgaatttggaaaatgggggttaggttt 189680  T
Q  134 ttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgtta 185  Q
    |  || ||| ||| ||| |||||| |||||| ||||||||||||| ||||||    
T  189679 t--gattatgatttttgaattgaagagtgtacaaaccatggcaatggtgtta 189630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 5509 - 5421
Alignment:
Q  33 ctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttgg-tttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  5509 ctaaggtaagggtgagactatctttcaatagtaatgggtatatgattctgattttggatttagcatagttctggttaaaattgggaatt 5421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 9119 - 8964
Alignment:
Q  54 ctctcaatgataatggttatataattctgattttggtttagcatag--ttctagttgaaattgggaattgggggttaggtttttggagtatcattcttgt 151  Q
    ||||||||||| || ||| |||||||||||||||| |||||||  |  |||| ||| || ||||||||||||  |||||||||  || ||| | | |||     
T  9119 ctctcaatgattatagttgtataattctgattttgatttagcaaggggttctggttaaatttgggaattggga-ttaggtttt--gattattaattttga 9023  T
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
     | |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  9022 ttagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaat 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 7131 - 7189
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  7131 attgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaat 7189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 3815 - 3738
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggtttagca 96  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||  | |  |||||||||||||||| |||||||    
T  3815 agttctgtccttcaatctaaggtaagggtgaggctaactctcaatgatatagat--tataattctgattttgatttagca 3738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 3895 - 3847
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  3895 attgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcag 3847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 2219 - 2274
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||    
T  2219 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaat 2274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 163262 - 163207
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  163262 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaat 163207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 19420 - 19478
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  19420 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 19478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 18525 - 18467
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || |||||| |||||||||    
T  18525 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaat 18467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 21911 - 21857
Alignment:
Q  156 aaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||    
T  21911 aaaagtgtagaaaccatggcaattgtgttaacaattgatgttcaggttgtagaat 21857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 39933 - 39991
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  39933 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 39991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 9707 - 9606
Alignment:
Q  34 taaggtaagggtgaaactatctctcaatgataatggttatataattctgatttt-ggtttagcatagttctagttgaaattgggaattgggggttaggtt 132  Q
    |||||||||||||| | |||||||||||  | |||| ||| ||||||||||||| |||||| ||||||||| || ||| ||||||||| ||| |||| ||    
T  9707 taaggtaagggtgagattatctctcaatagtgatggctatgtaattctgattttgggtttaacatagttctggtagaatttgggaatttgggtttagatt 9608  T
Q  133 tt 134  Q
    ||    
T  9607 tt 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 10025 - 9968
Alignment:
Q  153 ttgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  10025 ttgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaat 9968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 1196 - 1023
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataatggtta-tataattctgattttggtttagcatag--ttctagttgaaattgggaattgggg 124  Q
    ||||||||||||||||||||  ||| ||||||||||| || |||  ||| |||||||||||| |||||||  |  || | ||| || ||||||||||||     
T  1196 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtatgattctgattttgatttagcaaggggttgtggttaaatttgggaattggga 1097  T
Q  125 gttaggtttttggagtatcattcttgtattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
     ||||||||| |   | | ||| ||| ||||||||||||||||||||| | ||||||||||||| | |||||||||    
T  1096 -ttaggtttt-gatttttgatttttgaattgaaaagtgtagaaaccatagaaattgtgttaagagttgatgttcag 1023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 12978 - 12934
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  12978 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttca 12934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 23839 - 23887
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcag 200  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  23839 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcag 23887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 42225 - 42181
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  42225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttca 42181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 2151 - 2206
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||  ||||||||    
T  2151 gaaaagtgtagaaaccatggtaattgtgttaagaactgatgttcaggttgtagaat 2206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 8092 - 8037
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||  ||||||||    
T  8092 gaaaagtgtagaaatcatggcaattgttttaagaattgatgttcaggttgtagaat 8037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 1001 - 946
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||  ||||||||    
T  1001 gaaaagtgtagaaaccatggtaattgtgttaagagttgatgttcaggttgtagaat 946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 1174 - 1229
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||  ||||||||    
T  1174 gaaaagtgtagaaaccatggtaattgtgttaaaaattgatgttcaggttgtagaat 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 72365 - 72310
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||  ||||||||    
T  72365 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaat 72310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 42603 - 42545
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||| ||||||||||| || |||||| |||||||||    
T  42603 attgaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaat 42545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 32074 - 32016
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||| | || |||||| |||||||||    
T  32074 attgaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaat 32016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 169371 - 169313
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || ||||||  ||||||||    
T  169371 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaat 169313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 176724 - 176666
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    ||||||||||||||||||||| | ||||||||||||||| || ||||||  ||||||||    
T  176724 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaat 176666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 1129 - 1060
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataattctgattttggtttagca 96  Q
    ||||||||||||||||||||  ||| ||||||||||| || | || |||||||||||||||| |||||||    
T  1129 tcaatctaaggtaagggtgaggctaactctcaatgattatagtttgtataattctgattttgatttagca 1060  T

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Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 71555 - 71510
Alignment:
Q  75 taattctgattttggtttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  71555 taattctgattttggtttaacatagttctggttaaaattgggaatt 71510  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 23247 - 23291
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttca 199  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  23247 gaaaaatgtagaaaccatggtaattgtgttaagaattgatgttca 23291  T

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Target: scaffold0069 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 35576 - 35528
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgata 65  Q
    |||||||||||||||||||||||||||||||   || ||||||||||||    
T  35576 agttctgtccttcaatctaaggtaagggtgaggttaactctcaatgata 35528  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 42111 - 42167
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttag 129  Q
    ||||||||||| ||||||||| ||||||||| ||| |||||||||||| ||| ||||    
T  42111 tataattctgagtttggtttaacatagttctggttaaaattgggaatttgggtttag 42167  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 52806 - 52862
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttag 129  Q
    ||||||||||| ||||||||| ||||||||| ||| |||||||||||| ||| ||||    
T  52806 tataattctgagtttggtttaacatagttctggttaaaattgggaatttgggtttag 52862  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 36562 - 36502
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggttt 133  Q
    ||||||||||||||||||||| |||  |||| || ||||||||||||| ||| ||||||||    
T  36562 tataattctgattttggtttaacatgtttctggtagaaattgggaatttgggtttaggttt 36502  T

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Target: scaffold1439 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 1004 - 949
Alignment:
Q  155 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||| ||||  ||||||||||||||| |||||||||  ||||||||    
T  1004 gaaaagtgtagaaatcatgataattgtgttaagaattgatgttcaggttgtagaat 949  T

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Target: scaffold0371 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 8579 - 8516
Alignment:
Q  30 aatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggttta 93  Q
    ||||||||||||||||||  ||| ||||||||||| || | | |||||||||||||||| ||||    
T  8579 aatctaaggtaagggtgaggctaactctcaatgattatagatgtataattctgattttgattta 8516  T

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Target: scaffold0071 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 52058 - 51991
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataa-ttctgattttggttta 93  Q
    |||||||||||||||||||| |||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  52058 tcaatctaaggtaagggtgagactaactctcaatgattatagattatataacttctgattttgattta 51991  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 2056 - 1998
Alignment:
Q  152 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaat 210  Q
    |||||||||||||||||| |||  ||||||||||||||| |||||| ||  ||||||||    
T  2056 attgaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaat 1998  T

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Target: scaffold0607 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 3861 - 3788
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataat-ggttatataa-ttctgattttg 88  Q
    |||| ||| |||||||| ||||||||||||| |||| ||||||||||| || | |||||||| |||||||||||    
T  3861 agttttgttcttcaatcaaaggtaagggtgagactaactctcaatgattatagattatataacttctgattttg 3788  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 21841 - 21780
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||||||||||| ||||| ||||||||| || ||||||| | ||| ||| |||||||||    
T  21841 tataattctgatttttgtttaacatagttctggtagaaattgaggatttgggtttaggtttt 21780  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 56391 - 56452
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||| ||||||||||||| | ||||||| || ||||||||||||| |||  ||||||||    
T  56391 tataattatgattttggtttaacctagttctggtagaaattgggaatttgggtctaggtttt 56452  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 91779 - 91824
Alignment:
Q  75 taattctgattttggtttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||||||| ||||| ||||||||| ||| ||||||||||||    
T  91779 taattctgattttcgtttaacatagttctggttaaaattgggaatt 91824  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 142242 - 142181
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttaggtttt 134  Q
    ||||||| ||||||||||||| | ||||||| || ||||||||||||| |||  ||||||||    
T  142242 tataattatgattttggtttaacctagttctggtagaaattgggaatttgggtctaggtttt 142181  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 20784 - 20858
Alignment:
Q  17 agttctgtccttcaatctaaggtaagggtgaaactatctctcaatgataatggttatataattctgattttggttta 93  Q
    |||| ||||||||||||||||||||||||||   || ||||||||||||  | |  |||||||||||||||| ||||    
T  20784 agttttgtccttcaatctaaggtaagggtgaggttaactctcaatgatatagat--tataattctgattttgattta 20858  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 124108 - 124153
Alignment:
Q  75 taattctgattttggtttagcatagttctagttgaaattgggaatt 120  Q
    ||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  124108 taattctgattttggtttaacatagttccggttaaaattgggaatt 124153  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 11716 - 11680
Alignment:
Q  28 tcaatctaaggtaagggtgaaactatctctcaatgat 64  Q
    |||||||||||||||||||| |||| |||||||||||    
T  11716 tcaatctaaggtaagggtgagactaactctcaatgat 11680  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 40834 - 40890
Alignment:
Q  73 tataattctgattttggtttagcatagttctagttgaaattgggaattgggggttag 129  Q
    ||||||| ||||||||| ||| ||||||||| ||| |||||||||||| ||| ||||    
T  40834 tataattttgattttgggttaacatagttctggttaaaattgggaatttgggtttag 40890  T

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