View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2137_low_1 (Length: 598)
Name: NF2137_low_1
Description: NF2137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2137_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 493; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 22 - 587
Target Start/End: Original strand, 42655698 - 42656264
Alignment:
| Q |
22 |
gacgtaattccgaatcagaattgtgtcacaatccatgccactattttgcaacaaaattgtcaagagccaaagaaaagaacgagaatctgatcacaaattc |
121 |
Q |
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| T |
42655698 |
gacgtaattccgaatcagaattgtgtcacaatccatgccactattttgcaacaaaattgtcaagagccaaagaaaagaacgagaatctgatcacaaattc |
42655797 |
T |
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| Q |
122 |
atcacccgcactcatgtaggaaaatttcattttaatttggagagaaaagcatatcactannnnnnnnnnnnnna-aaacagtaaatatcaatggaatctc |
220 |
Q |
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| T |
42655798 |
atcacccgcacttatgtaggaaaatttcattttaatttggagagaaaagcatatcactgttttttttttttttttaaacaataaatatcaatggaatctc |
42655897 |
T |
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| Q |
221 |
tcaaggcaaaattgacacgtgcccaacaattttctgtcataacaaaacaaaacggacaaaataagagcggtgattttgttaacatctgtggaatctaatc |
320 |
Q |
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| T |
42655898 |
tcaaggcaaaattgacacgtgcccaacaattttctgtcataacaaaacaaaacggacaaaataatagcggtgattttgttaacatctgtggaatctaatc |
42655997 |
T |
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| Q |
321 |
taaggtttgagagtaaagttaaataggccagggaaatatgcaattagaaatattagaaaaataacaaaaaggcgagattccttttgctaaaattctacct |
420 |
Q |
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| T |
42655998 |
taaggtttgagagtaaagttaaataggccagggaaatatgtaattagaaatattagaaaaataacaaaaaggcgagattccttttgctaaaattctacct |
42656097 |
T |
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| Q |
421 |
gatgaaaatctacatagattattatatttatgtgactactatgtatttatgttatatagagtacaagaatatatattgataatgagccctgttgtgtaac |
520 |
Q |
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| T |
42656098 |
gatgaaaatctacatagattattatatttatgtgactactatgtatttatgttatatagagtacaagaatatatattgataatgagccctgttgtgtaac |
42656197 |
T |
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| Q |
521 |
ttttaaaaaattaagtaccactagttgctcaaagattatataggttagcttagcctcatgagttcat |
587 |
Q |
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| T |
42656198 |
ttttaaaaaattaagtaccactagttgctcaaagattatataggttagcttagcctcatgagttcat |
42656264 |
T |
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