View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2137_low_10 (Length: 443)
Name: NF2137_low_10
Description: NF2137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2137_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 8 - 423
Target Start/End: Original strand, 4854947 - 4855361
Alignment:
| Q |
8 |
aagcataggttgaataaggagttacaattatcctaaaaaatgtaatccagattgatatgnnnnnnnnnnnnnnn-gttccgaaataagaaactaagggtg |
106 |
Q |
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| T |
4854947 |
aagcataggttgaataaggagttacaattatcctaaaaaatgtaatccagattgatatgaaaaaaaaaaaaaaaagttccgaaataagaaactaagggtg |
4855046 |
T |
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| Q |
107 |
tgatatgtttttaaatgttagtcaatctttttgcttaatctaatggtcaaatagaatagtacatgagaggtgcttaatcgagtgctcgccctaagacact |
206 |
Q |
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| T |
4855047 |
tgatatgtttttaaatgttagtcaatctttttgcttaatctaatcgtcaaatagaatagtacatgagaggtgcttaatcgagtgctcgccctaagatact |
4855146 |
T |
|
| Q |
207 |
ccttaaaaacatttaaaaacattttgacactttaaagagagaaatagataaagagaatgatgtgatatgttactgatgtgatggaaaaatagagatgaaa |
306 |
Q |
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||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
4855147 |
ccttaaaaacatttaaaaatattttgacactttaa--agagaaatagataaagagaatgatgtgatatgttattgatgtgatggaaaaatagagatgaaa |
4855244 |
T |
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| Q |
307 |
cnnnnnnntacaatgttgaattaatgtataaaagttagagtgttcaaat-aaaaaagttgttagattaaataaactaatatgatctaacagaaatgatat |
405 |
Q |
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||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
4855245 |
-aaaaatatactatgttgaattaatgtataaaagttagagtgttcaaataaaaaaagttgttagattaaataaactaatatgatctaacataaatgatat |
4855343 |
T |
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| Q |
406 |
ttaaagaacaattttatg |
423 |
Q |
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|||||||||||||||||| |
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| T |
4855344 |
ttaaagaacaattttatg |
4855361 |
T |
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