View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2137_low_21 (Length: 286)
Name: NF2137_low_21
Description: NF2137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2137_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 5 - 275
Target Start/End: Original strand, 31291849 - 31292120
Alignment:
| Q |
5 |
aaatcttgattgttcttttaccatccctttatttcaaggtaaccataaaattgacatatgcccacggacgcatggttgttccgttgaagacttacacatt |
104 |
Q |
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| T |
31291849 |
aaatcttgattgttcttctatcatccctttatttcaaggtaaccataaaattgacatatccccacggacgcatgtttgttccgttgaagacttgcacatt |
31291948 |
T |
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| Q |
105 |
tatcccatggcaaggtaggaggcttttcttgggaagttacaaagttttgaataaattggcatacatg-catcgcatgtgatgccttgatcgatctaagct |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
31291949 |
tatcccatggcaaggtaggaggcttttcttgggaagttacaaagttttgaatgaattggcatacatgacatcgcatgtgatgccttgatcgatctaagct |
31292048 |
T |
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| Q |
204 |
ctttttactttgaatttggctacgtagatctcgataaggagggagaagatggagtttaacattcctcctagt |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31292049 |
ctttttactttgaatttggctacgtagatctcgataaggagggagaagatggagtttaacattcctcctagt |
31292120 |
T |
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