View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2137_low_31 (Length: 240)
Name: NF2137_low_31
Description: NF2137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2137_low_31 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 304761 - 304968
Alignment:
| Q |
19 |
ctgcactgctttgataaaagtccaaaaacacaaactttgctcctggaagctgccctccatttatattctgaactaactgcttaagacctgagttaaaata |
118 |
Q |
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| T |
304761 |
ctgcactgctttgataaaagtccaaaaacacaaactttgctcctggaagctgccctccatttatattctgaactaactgcttaagacctgagttaaaata |
304860 |
T |
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| Q |
119 |
ctgaatggcattgttgatcttgtcattgcatccag---tgttgttaccattaatacgtgctaattcatatggtatgcacccaatttgaccaactgctgta |
215 |
Q |
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||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
304861 |
ctggatggcattgttgatcttgtcattgcatccagtactgctgttaccattaatacgtgctaattcatatggtatgcacccaatttgaccaactgctgta |
304960 |
T |
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| Q |
216 |
acgatcac |
223 |
Q |
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|||||||| |
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| T |
304961 |
acgatcac |
304968 |
T |
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