View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21381_low_2 (Length: 487)

Name: NF21381_low_2
Description: NF21381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21381_low_2
NF21381_low_2
[»] chr4 (38 HSPs)
chr4 (90-460)||(48492260-48492639)
chr4 (7-89)||(711960-712042)
chr4 (7-89)||(25051693-25051775)
chr4 (7-89)||(33703141-33703223)
chr4 (7-92)||(27316731-27316816)
chr4 (7-94)||(28982840-28982927)
chr4 (7-89)||(1771284-1771366)
chr4 (7-93)||(17619170-17619256)
chr4 (7-89)||(23035980-23036062)
chr4 (7-89)||(27864564-27864646)
chr4 (7-89)||(55966364-55966446)
chr4 (7-88)||(41878407-41878488)
chr4 (7-92)||(35017730-35017814)
chr4 (9-89)||(960890-960970)
chr4 (9-89)||(27550309-27550389)
chr4 (7-87)||(27893860-27893940)
chr4 (7-90)||(55272394-55272477)
chr4 (7-89)||(28988473-28988555)
chr4 (7-89)||(48463468-48463550)
chr4 (9-90)||(12496955-12497036)
chr4 (7-87)||(43949819-43949900)
chr4 (7-87)||(3756264-3756344)
chr4 (7-87)||(43514704-43514784)
chr4 (11-86)||(23204800-23204875)
chr4 (7-89)||(21687006-21687088)
chr4 (7-89)||(32728357-32728439)
chr4 (7-87)||(39631102-39631183)
chr4 (7-87)||(35037007-35037087)
chr4 (7-89)||(48435597-48435679)
chr4 (7-87)||(31680904-31680984)
chr4 (7-87)||(43735744-43735824)
chr4 (7-91)||(45490331-45490415)
chr4 (7-89)||(46827724-46827806)
chr4 (54-94)||(36004169-36004209)
chr4 (7-87)||(41327561-41327641)
chr4 (9-89)||(49229684-49229764)
chr4 (9-47)||(51512285-51512323)
chr4 (7-87)||(38851515-38851595)
[»] chr5 (14 HSPs)
chr5 (7-89)||(41334681-41334763)
chr5 (7-89)||(7617133-7617215)
chr5 (7-92)||(2614667-2614752)
chr5 (7-89)||(18033982-18034064)
chr5 (7-91)||(22512303-22512387)
chr5 (7-90)||(32473412-32473495)
chr5 (7-87)||(5256997-5257077)
chr5 (14-89)||(33855068-33855143)
chr5 (7-89)||(33801469-33801551)
chr5 (7-89)||(17208074-17208156)
chr5 (11-89)||(38470579-38470657)
chr5 (7-87)||(25915006-25915085)
chr5 (7-81)||(39122451-39122524)
chr5 (7-89)||(30622737-30622818)
[»] chr8 (26 HSPs)
chr8 (7-94)||(11582761-11582848)
chr8 (7-89)||(36743501-36743583)
chr8 (7-88)||(45397317-45397398)
chr8 (7-87)||(26125637-26125717)
chr8 (7-91)||(29705360-29705444)
chr8 (9-89)||(30660762-30660842)
chr8 (7-87)||(42295197-42295277)
chr8 (7-89)||(35181516-35181598)
chr8 (7-89)||(42197453-42197535)
chr8 (7-100)||(34304777-34304870)
chr8 (7-87)||(29800968-29801048)
chr8 (7-87)||(42699259-42699339)
chr8 (7-87)||(20148762-20148842)
chr8 (7-87)||(30912580-30912660)
chr8 (7-90)||(1375541-1375624)
chr8 (7-89)||(2165981-2166063)
chr8 (7-89)||(5754903-5754985)
chr8 (7-89)||(16603644-16603726)
chr8 (7-89)||(18066736-18066818)
chr8 (7-81)||(31384672-31384746)
chr8 (7-87)||(33630011-33630091)
chr8 (7-89)||(2546996-2547078)
chr8 (45-89)||(19386626-19386670)
chr8 (54-91)||(28977144-28977181)
chr8 (7-47)||(9241594-9241634)
chr8 (7-87)||(3743773-3743853)
[»] chr3 (25 HSPs)
chr3 (7-90)||(36150129-36150212)
chr3 (7-92)||(42100685-42100770)
chr3 (7-87)||(27748565-27748645)
chr3 (7-88)||(54237097-54237178)
chr3 (7-91)||(45126946-45127030)
chr3 (7-97)||(25413672-25413763)
chr3 (7-89)||(4190283-4190365)
chr3 (7-89)||(24688420-24688502)
chr3 (7-89)||(46941053-46941135)
chr3 (7-89)||(54246166-54246248)
chr3 (7-88)||(40480750-40480831)
chr3 (7-88)||(42394437-42394518)
chr3 (7-89)||(40808865-40808947)
chr3 (7-87)||(53581876-53581956)
chr3 (7-94)||(47191044-47191130)
chr3 (7-89)||(9434124-9434206)
chr3 (7-89)||(10457910-10457992)
chr3 (7-89)||(25996268-25996350)
chr3 (7-91)||(34791827-34791911)
chr3 (7-85)||(29558252-29558330)
chr3 (7-89)||(53273702-53273784)
chr3 (7-93)||(1078223-1078308)
chr3 (7-93)||(51757589-51757675)
chr3 (7-89)||(52627995-52628077)
chr3 (7-47)||(52629870-52629910)
[»] chr6 (18 HSPs)
chr6 (7-89)||(7292747-7292829)
chr6 (7-89)||(7273353-7273435)
chr6 (7-89)||(9698351-9698433)
chr6 (7-91)||(13743239-13743323)
chr6 (7-91)||(13748739-13748823)
chr6 (7-89)||(26670027-26670109)
chr6 (7-87)||(24204005-24204085)
chr6 (7-87)||(27441544-27441624)
chr6 (7-90)||(30014342-30014425)
chr6 (7-89)||(7367549-7367631)
chr6 (7-89)||(26466799-26466881)
chr6 (7-89)||(33242403-33242485)
chr6 (11-89)||(3213400-3213478)
chr6 (7-92)||(33253910-33253995)
chr6 (7-87)||(30735984-30736064)
chr6 (12-89)||(31109245-31109322)
chr6 (7-89)||(21279929-21280011)
chr6 (11-89)||(21293699-21293777)
[»] chr7 (29 HSPs)
chr7 (7-92)||(24001030-24001115)
chr7 (7-90)||(42538449-42538532)
chr7 (7-89)||(41861674-41861758)
chr7 (7-90)||(5810942-5811025)
chr7 (7-89)||(35069721-35069803)
chr7 (7-87)||(10573751-10573831)
chr7 (7-91)||(45326018-45326102)
chr7 (7-89)||(5194249-5194331)
chr7 (7-89)||(40236919-40237001)
chr7 (9-86)||(26898422-26898499)
chr7 (7-87)||(4638217-4638297)
chr7 (7-87)||(43343642-43343722)
chr7 (7-87)||(44326180-44326260)
chr7 (7-87)||(44416952-44417032)
chr7 (7-90)||(31513286-31513369)
chr7 (7-89)||(5015395-5015477)
chr7 (7-89)||(9216302-9216383)
chr7 (7-89)||(42972852-42972934)
chr7 (7-89)||(43317443-43317525)
chr7 (7-89)||(24280614-24280696)
chr7 (7-73)||(27393278-27393344)
chr7 (11-88)||(31408655-31408732)
chr7 (22-90)||(39998407-39998475)
chr7 (7-89)||(27535249-27535331)
chr7 (9-80)||(32029837-32029908)
chr7 (7-89)||(33384870-33384953)
chr7 (56-89)||(38160661-38160694)
chr7 (7-87)||(16180375-16180454)
chr7 (7-47)||(38160597-38160637)
[»] chr2 (33 HSPs)
chr2 (7-91)||(1750412-1750496)
chr2 (7-91)||(16096745-16096829)
chr2 (295-458)||(7794882-7795045)
chr2 (7-89)||(12302271-12302353)
chr2 (7-89)||(30838632-30838714)
chr2 (7-88)||(19047158-19047239)
chr2 (7-87)||(43490419-43490499)
chr2 (7-94)||(12415478-12415565)
chr2 (7-94)||(12427538-12427625)
chr2 (7-89)||(43114557-43114639)
chr2 (7-87)||(11825672-11825752)
chr2 (7-87)||(41281992-41282072)
chr2 (7-89)||(16803968-16804050)
chr2 (7-89)||(16843250-16843332)
chr2 (10-87)||(33229303-33229381)
chr2 (7-89)||(43335781-43335863)
chr2 (7-94)||(966852-966939)
chr2 (6-89)||(14285676-14285759)
chr2 (7-89)||(4764744-4764826)
chr2 (7-89)||(18491705-18491787)
chr2 (7-87)||(6518487-6518566)
chr2 (7-89)||(34895759-34895841)
chr2 (7-88)||(34817794-34817875)
chr2 (7-87)||(4299438-4299518)
chr2 (7-87)||(8896601-8896681)
chr2 (7-91)||(13780753-13780837)
chr2 (54-92)||(42849911-42849949)
chr2 (56-92)||(7070413-7070449)
chr2 (7-47)||(42849876-42849916)
chr2 (7-62)||(4451968-4452023)
chr2 (62-92)||(42849964-42849994)
chr2 (10-47)||(39149313-39149350)
chr2 (61-93)||(36168990-36169022)
[»] chr1 (25 HSPs)
chr1 (7-90)||(43571104-43571187)
chr1 (7-89)||(5489776-5489858)
chr1 (7-91)||(48119626-48119710)
chr1 (7-89)||(44112677-44112759)
chr1 (7-91)||(38335916-38336000)
chr1 (7-90)||(35003293-35003376)
chr1 (7-89)||(23989541-23989624)
chr1 (11-89)||(37814778-37814856)
chr1 (7-89)||(41065153-41065235)
chr1 (7-89)||(46168383-46168465)
chr1 (7-89)||(48498980-48499062)
chr1 (9-90)||(50448280-50448361)
chr1 (7-89)||(38113213-38113295)
chr1 (7-89)||(45427763-45427845)
chr1 (7-89)||(45639750-45639832)
chr1 (7-87)||(2497580-2497660)
chr1 (13-89)||(24769523-24769599)
chr1 (7-89)||(750323-750405)
chr1 (7-87)||(4401329-4401410)
chr1 (8-89)||(26585462-26585543)
chr1 (7-87)||(7447828-7447907)
chr1 (42-89)||(14427347-14427394)
chr1 (7-94)||(35000131-35000218)
chr1 (7-89)||(45705825-45705907)
chr1 (7-39)||(4888093-4888125)
[»] scaffold0119 (1 HSPs)
scaffold0119 (7-89)||(685-767)
[»] scaffold0038 (1 HSPs)
scaffold0038 (7-88)||(112656-112737)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-87)||(45737-45817)
[»] scaffold0385 (1 HSPs)
scaffold0385 (7-89)||(11251-11333)
[»] scaffold0187 (2 HSPs)
scaffold0187 (7-89)||(14206-14288)
scaffold0187 (7-89)||(24534-24616)
[»] scaffold0100 (1 HSPs)
scaffold0100 (7-90)||(35474-35557)
[»] scaffold0157 (1 HSPs)
scaffold0157 (9-90)||(23441-23522)


Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-159; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 90 - 460
Target Start/End: Complemental strand, 48492639 - 48492260
Alignment:
Q  90 ataatctaaacaacatgaactttaacnnnnnnngtgtcaattttactttctaaaaatagaacttatacaattttgtcaaaaaacagaatttttagaatta 189  Q
    |||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48492639 ataatctaaacaacatcaactttaactttttttgtgtcaattttactttctaaaaatagaacttatacaattttgtcaaaaaacagaatttttagaatta 48492540  T
Q  190 a--------aatgtcatannnnnnn-caccgtgtcctttttaggcagcaccctatttttagtagtttctttatcatcttattgaatggaatatggcagaa 280  Q
    |        ||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48492539 atagtagtaaatgtcattttttttttcaccgtgtcctttttaggcagcaccctatttttagtagtttctttatcatcttattgaatggaaaatggcagaa 48492440  T
Q  281 tgtttggtgtaaaagatgagatattctgcatgtttgagggagctctagacaatttagggagattaaggcaacaatatggactagccaagtcagccaatga 380  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48492439 tgtttggtgtaaaagatgagatattctgcatgtttgagggagctctagacaatttagggagattaaggcaacaatatggactagccaagtcagctaatga 48492340  T
Q  381 agttgttttggtgattgaggcttacaaagctttacgtgacagagcaccttatcctcccaatcacgttgttggtcatctca 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48492339 agttgttttggtgattgaggcttacaaagctttacgtgacagagcaccttatcctcccaatcacgttgttggtcatctca 48492260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 712042 - 711960
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||||||| |||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  712042 tgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 25051775 - 25051693
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||| |||||||||| |||||||||    
T  25051775 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 33703223 - 33703141
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| | ||||  ||||||||||||||||||||||||||||    
T  33703223 tgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 33703141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 27316731 - 27316816
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    |||||||||||||||||||||||| |||||||| |||||||||||  |||||| ||||||||||||||| | ||||||||||||||    
T  27316731 tgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttccata 27316816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 28982840 - 28982927
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    |||||||||||||||||||||||||||||| || || |||| |||| ||||||  |||||||||||||||||||||||||||| ||||    
T  28982840 tgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttccttaat 28982927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 1771284 - 1771366
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||| ||||||||| ||||||||| ||||||| |||  |||||| |||||||||||||||||||||||||||||    
T  1771284 tgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 17619170 - 17619256
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataa 93  Q
    ||||||||| |||||||||||||| |||| ||| ||||||| |||| ||||||||| |||| |||||||||||||||||||||||||    
T  17619170 tgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttccataa 17619256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 23036062 - 23035980
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||| |||||| |||||||||  ||||||||||||||||||    
T  23036062 tgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcc 23035980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 27864646 - 27864564
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  | |||||||||||| |||||| ||||||||||||||    
T  27864646 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcc 27864564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 55966364 - 55966446
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| || |||| |||  | ||||||||||||||||||| ||||||||||||||    
T  55966364 tgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 55966446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 41878488 - 41878407
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||| |||||||||||||||  |||||||||| |||  ||||||||||||||| |||||||||||||||||||    
T  41878488 tgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 35017814 - 35017730
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||  | | || ||||||||||||||||||||||||||||||||    
T  35017814 tgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttccata 35017730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 960890 - 960970
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| |||||||||| ||||||||  |||||||||| ||||  |||||||| ||||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 960970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 27550389 - 27550309
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||  |||||| |||   |||||  ||||||||||||||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 27893860 - 27893940
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||  | |||||||||||| |||||| ||||||||||||    
T  27893860 tgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 55272394 - 55272477
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||| |||||||||||||| |||| ||| ||||||| ||||  |||||||| |||||| ||||||||||||||||||||    
T  55272394 tgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcca 55272477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 28988555 - 28988473
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| |||||| |||||| | ||| ||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcc 28988473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 48463468 - 48463550
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| || |||| |||    |||||||||||| |||||| ||||||||||||||    
T  48463468 tgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcc 48463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 12497036 - 12496955
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||||||||||||||| ||||||||| || |||| |||   ||||| ||||||||||||||||| ||||||||||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcca 12496955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 43949819 - 43949900
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaat-aaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  |||| | |||| |||||||||||||||| ||||||    
T  43949819 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 3756264 - 3756344
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||| || |||| ||||||||| |||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  3756264 tgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 43514704 - 43514784
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||| |||||||||||   ||||| |||   ||||| |||||||||||||||||||||||||||    
T  43514704 tgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 23204800 - 23204875
Alignment:
Q  11 atgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattt 86  Q
    |||||||||| ||||||||||||||||||||| |||| |||  | |||| |||||||| |||||||||||||||||    
T  23204800 atgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 21687088 - 21687006
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| |||||||  |||||||||| | ||||||||  ||||||  |||||||| |||||||||||||||||||    
T  21687088 tgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcc 21687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 32728439 - 32728357
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||| ||||| ||| |||| ||| ||||||| |||| ||||||||| |||||| |||||||||||||||||||    
T  32728439 tgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 32728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 39631183 - 39631102
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaat-aaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||||||||||||  |||||| |||  |||||| |||| |||||| ||||||||| ||||||    
T  39631183 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 35037087 - 35037007
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||||||| |||| ||| ||||||| ||||  |||||||  ||||||||| ||||||||||||||    
T  35037087 tgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 48435597 - 48435679
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||| || |||||||| ||| ||||||| |||| ||||| ||| |||| ||||||||||||||| |||||    
T  48435597 tgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 48435679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 31680984 - 31680904
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||||||||| |  ||||||| |||    |||||||||||| |||||| | ||||||||||    
T  31680984 tgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 43735824 - 43735744
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||| ||||||||| ||||||||| |  ||||||||  | |||| ||||||||| ||||||||||| |||||    
T  43735824 tgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 45490331 - 45490415
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||| |||| ||| ||||||||||||||  |||||| |||  | ||||| ||||||  ||||||||||||||||||||||    
T  45490331 tgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttccat 45490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 46827724 - 46827806
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||| || |||||||||  | | |||| ||| ||||||| ||||  |||||||| ||||||||||||||||||||||||||    
T  46827724 tgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 46827806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 36004169 - 36004209
Alignment:
Q  54 ggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  36004169 ggtgtatgattaaagggtattcatgtaacattttccataat 36004209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 41327561 - 41327641
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||| ||| || | |||| |||||| |||  ||||| ||||||||||||||  ||||||||||||    
T  41327561 tgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 49229684 - 49229764
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| |||||| ||||||| |||| |||   ||||| |||| ||||||||| |||||| ||||||| |||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcc 49229764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 51512285 - 51512323
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgta 47  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  51512285 agatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 38851595 - 38851515
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| ||| |||||| ||| |||| ||| | ||||| | |||| ||||||| |||||| | |||||||||||||||    
T  38851595 tgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaacatttt 38851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 41334681 - 41334763
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  41334681 tgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 7617215 - 7617133
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||    
T  7617215 tgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcc 7617133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 2614667 - 2614752
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||||||||||||||||||    
T  2614667 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccata 2614752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 18034064 - 18033982
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| |||||||||||||||||||||||||| |||   ||||| |||||||||||||||||||||||||||||    
T  18034064 tgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 22512387 - 22512303
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||   ||||| |||||||||||||||||||||||||||||||    
T  22512387 tgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccat 22512303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 32473412 - 32473495
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||| ||||||||||||||||||| |||  |||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  32473412 tgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcca 32473495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 5257077 - 5256997
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||  | |||||||||||| |||||| ||||||||||||    
T  5257077 tgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 33855068 - 33855143
Alignment:
Q  14 aacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||| | |||||||||| ||||||| |||  |||||| |||||||||||||||||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 33801551 - 33801469
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| |||||||||||||||||| | ||||| |||  ||||||  |||||||| |||||||||||||||||||    
T  33801551 tgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcc 33801469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 17208156 - 17208074
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| ||| |||| ||| ||||||| ||||  |||||||| ||||||||||||| ||||||||||||    
T  17208156 tgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcc 17208074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 38470657 - 38470579
Alignment:
Q  11 atgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||| |||||||||||||| |||||||| ||||||| |||    ||||||||||||||||||| ||||||||||||||    
T  38470657 atgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcc 38470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 25915006 - 25915085
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| ||| ||||||| | |||||||| ||||||| |||  |||||| |||||||||||||||||||||||||||    
T  25915006 tgagatgaacctacaaaaatattc-taatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 39122451 - 39122524
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaa 81  Q
    ||||||||| |||||||||||| |||||||||| |||||| ||||  | |||||||||||| |||||||||||||    
T  39122451 tgagatgaatttaccaaaatattcctaatacat-gggtgtctaattagatgtatgaataaaaggtgttcatgtaa 39122524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 30622737 - 30622818
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||| || |||||||||||||| |||| ||| || | || |||| ||||||||| |||||| |||||||||||||||||||    
T  30622737 tgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcc 30622818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 11582848 - 11582761
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||||||||||||||||||||    
T  11582848 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccataat 11582761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 36743501 - 36743583
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| |||||||||||||||||||||||||||||    
T  36743501 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 45397398 - 45397317
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  |||||| |||||||||||||||| |||||||||||    
T  45397398 tgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 26125717 - 26125637
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||| ||||||||||||    
T  26125717 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 29705444 - 29705360
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||  ||||||  ||||||||||||||||||||||||||||||    
T  29705444 tgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttccat 29705360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 30660762 - 30660842
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||||||| |||  | ||||  ||||||||||||||||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcc 30660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 42295277 - 42295197
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||  |||||| |||||||||||||||||||||||||||    
T  42295277 tgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 35181598 - 35181516
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  35181598 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42197453 - 42197535
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||  |||||| ||||||| |||||||||||||||||||||    
T  42197453 tgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 34304870 - 34304777
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataatctaaac 100  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| |||| ||||||||| |||||| ||||||||||||||||||| |||| |||||    
T  34304870 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttccttaatataaac 34304777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 29800968 - 29801048
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  | |||||||||||| |||||| ||||||||||||    
T  29800968 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 42699339 - 42699259
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||| ||||||||| ||||||||| |||||| |||  |||||| |||||||||||||||||||||||||||    
T  42699339 tgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 20148842 - 20148762
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||  | ||||||||||||||||||| ||||||||||||    
T  20148842 tgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 30912580 - 30912660
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||| |||||||||||   ||||| |||  |||||| |||||||||||||||||||||||||||    
T  30912580 tgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 1375624 - 1375541
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    |||||| || |||||||||||||||||||| || ||||||| |||  |||||||||||||| ||||||||||||| ||||||||    
T  1375624 tgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcca 1375541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 2165981 - 2166063
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||| ||||||||| |||| || |||  |||||| ||||||| ||||||||||||| |||||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 5754985 - 5754903
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||| || || |||| |||  | |||| ||||||| |||||||||||||||||||||    
T  5754985 tgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcc 5754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 16603644 - 16603726
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| ||  |||| ||| |||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  16603644 tgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcc 16603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 18066736 - 18066818
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||| |||||||||||||||||| || |||| ||||   ||||||| ||||||||||||||||||||||||||    
T  18066736 tgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcc 18066818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 31384746 - 31384672
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaa 81  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||   |||| |||||||||||||||||||||    
T  31384746 tgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaa 31384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 33630011 - 33630091
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||| ||||| |||||||| ||||||||||| |||  ||||||||| |||||||||||| |||||||||||    
T  33630011 tgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 2547078 - 2546996
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| ||||||||||||||||||  |||||| |||   |||||  ||||||| ||||||||||||||||||||    
T  2547078 tgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 2546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 19386626 - 19386670
Alignment:
Q  45 gtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||    
T  19386626 gtataatagggtgtatgattaaagggtgttcatgtaacattttcc 19386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 28977181 - 28977144
Alignment:
Q  54 ggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    |||||| |||||||||||||||||||||||||||||||    
T  28977181 ggtgtaggaataaagggtgttcatgtaacattttccat 28977144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 9241634 - 9241594
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgta 47  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  9241634 tgagatgaacttacaaaaatatccctaatatatagggtgta 9241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 3743853 - 3743773
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||| |||||||| | ||||| || |||||||||||  |  | |||||||||||||||  ||| ||||||||    
T  3743853 tgagatgaacttatcaaaatatacttaatatatggggtgtataatgggagggatgaataaagggtgtatatggaacatttt 3743773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36150212 - 36150129
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  36150212 tgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcca 36150129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 42100770 - 42100685
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  |||||| ||||||||||||||||||||||||||||||||    
T  42100770 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccata 42100685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 27748645 - 27748565
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||||    
T  27748645 tgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 54237178 - 54237097
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||||||||||||||    
T  54237178 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 45126946 - 45127030
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  | ||||||||||||||||||| ||||||||||||||||    
T  45126946 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttccat 45127030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 25413763 - 25413672
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc-ataatcta 97  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||  |||||| ||||||||||||||||||||||||||||| ||||||||    
T  25413763 tgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctataatcta 25413672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 4190283 - 4190365
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||||||||| |||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  4190283 tgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 24688420 - 24688502
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||   |||||  ||||||||||||||||||||||||||||    
T  24688420 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 24688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 46941135 - 46941053
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  | |||| |||||||||||||||||||||||||||||    
T  46941135 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 54246166 - 54246248
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||    
T  54246166 tgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 40480831 - 40480750
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    |||||||||||||||||||||||||||||||||||| |||| |||  ||  |||||||||||||||||||||||||||||||    
T  40480831 tgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 42394437 - 42394518
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||||||||||||||||||||||||||||| |||    |||| ||||||||||||||||||||||||||||    
T  42394437 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 40808947 - 40808865
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  |||||| ||||||| |||||| ||||||||||||||    
T  40808947 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcc 40808865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 53581876 - 53581956
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||| |||||||||||||||||||||| |||| |||   |||||||||||||| ||||||||||||||||||    
T  53581876 tgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 47191044 - 47191130
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    ||||||||||||| ||||||||| ||||||||| ||||||| |||  |||||| ||||||||||||||||||||||||||||| ||||    
T  47191044 tgagatgaacttatcaaaatatctctaatacat-gggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttaat 47191130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 9434206 - 9434124
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| ||||  |||||||| ||||||||||||||||||||||||||    
T  9434206 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 9434124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 10457910 - 10457992
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||| || |||||||||||||| |||| ||| ||||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  10457910 tgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 10457992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 25996350 - 25996268
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| ||| ||||| || ||||||| |||| | ||||||| ||||||||||||||||||||||||||    
T  25996350 tgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcc 25996268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 34791911 - 34791827
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||| |||  ||||| |||||||| |||  ||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  34791911 tgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttccat 34791827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 29558252 - 29558330
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatt 85  Q
    ||||||||| ||||||| |||| ||||||| |||||||||| |||  | |||||||||||||||||||||| |||||||    
T  29558252 tgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacatt 29558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 53273702 - 53273784
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| || |||| |||  ||| || ||||||| | ||||||| |||||||||||    
T  53273702 tgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcc 53273784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 1078308 - 1078223
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataa 93  Q
    |||||||||| ||| ||||||||| ||||||||  |||||| |||  |||| | ||||||||||||||||||||||||||| |||||    
T  1078308 tgagatgaacctacaaaaatatcc-taatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttttcataa 1078223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 51757675 - 51757589
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataa 93  Q
    ||||||||| |||| ||||| ||| |||| |||  |||||| |||| ||||||||| ||||||||||| |||||| |||||||||||    
T  51757675 tgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttccataa 51757589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 52627995 - 52628077
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||||| | |||| |||  |||||| |||| | ||||||| ||||||||||||| ||||||||||||    
T  52627995 tgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcc 52628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 52629910 - 52629870
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgta 47  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  52629910 tgagatgaacttacaaaaatatccttaatacatagggtgta 52629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 7292829 - 7292747
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||||||    
T  7292829 tgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcc 7292747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 7273353 - 7273435
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  7273353 tgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 9698351 - 9698433
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| |||||||||||||||||||||||||||||    
T  9698351 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 13743239 - 13743323
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  | |||||||||||| |||||||||||||||||||||||    
T  13743239 tgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttccat 13743323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 13748739 - 13748823
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  | |||||||||||| |||||||||||||||||||||||    
T  13748739 tgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttccat 13748823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 26670027 - 26670109
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||  |||||| |||  |||||| |||||||||||||||||||||||||||||    
T  26670027 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 24204005 - 24204085
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  24204005 tgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 27441624 - 27441544
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||||||| ||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||    
T  27441624 tgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 30014425 - 30014342
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    |||||||||||||||||||||| |||||||||| || ||||||||  | |||| ||||||||||||||||||||||||||||||    
T  30014425 tgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcca 30014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 7367631 - 7367549
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| || |||| |||  |||||||||||||| | ||||||| |||||||||||    
T  7367631 tgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcc 7367549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 26466881 - 26466799
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||| ||||||||||| | ||||| |||  |||||| |||||||||||||| ||||||||||||||    
T  26466881 tgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 33242485 - 33242403
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| ||| |||||||| ||||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  33242485 tgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcc 33242403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 3213478 - 3213400
Alignment:
Q  11 atgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||| |||||||||||||| |||||||| ||||||| |||  | ||||||||||||||||||| ||||||||||||||    
T  3213478 atgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 3213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 33253995 - 33253910
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    ||||||||| ||||||| || |||||||| ||| ||||||| |||| ||||| ||| |||| ||||||||||||||||||||||||    
T  33253995 tgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttccata 33253910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 30736064 - 30735984
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||| |||||||||  |||||| |||  |||||| |||||||  ||||||||||||||||||    
T  30736064 tgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 31109245 - 31109322
Alignment:
Q  12 tgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||| ||| ||||||||||||| | ||| |||||||||||  | ||||||| ||||||||||||||||||||||||||    
T  31109245 tgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcc 31109322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 21280011 - 21279929
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||||||||||||||||||| || |||  |||    ||||  ||||||||||||||||||||||||||||    
T  21280011 tgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcc 21279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 21293699 - 21293777
Alignment:
Q  11 atgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||| |||||||||||||| |||||||| ||||||| | |    ||||||||||||||||||| ||||||||||||||    
T  21293699 atgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcc 21293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 24001030 - 24001115
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||||||||||||||||||    
T  24001030 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccata 24001115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 42538449 - 42538532
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||||||||||||||||    
T  42538449 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcca 42538532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 41861758 - 41861674
Alignment:
Q  7 tgagatgaacttaccaaaatatcccta--atacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||| |||||||||||||||| |||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  41861758 tgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcc 41861674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 5810942 - 5811025
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||  |||||| |||||||||||| |||||||||||||||||    
T  5810942 tgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcca 5811025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 35069803 - 35069721
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||  |||||| |||  |||||| |||||||| ||||||||||||||||||||    
T  35069803 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 10573831 - 10573751
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||||| |||||||||| ||||||| |||| | ||||||||||||||||||| ||||||||||||    
T  10573831 tgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 45326102 - 45326018
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    |||||||||||||||||||||||||||||| || ||||||| ||| || |||||||||||| |||||| |||||||| |||||||    
T  45326102 tgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttccat 45326018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 5194249 - 5194331
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| |||||||||| ||| |||||||||||| |||  |||||||||||||| |||||||||||||||||||||    
T  5194249 tgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 40237001 - 40236919
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| |||| | ||||||| ||||||||||||||||||||||||||    
T  40237001 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcc 40236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattt 86  Q
    ||||||||||||||||||||||||||||||| |  |||| |||  |||||||||||||| ||||||||||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 4638217 - 4638297
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||| ||||| || ||||||| |||   ||||||||||||| |||||||||||||||||||    
T  4638217 tgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 43343642 - 43343722
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||  |||||| | |||||||||||||||||    
T  43343642 tgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 44326260 - 44326180
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||  | ||||||||||||||||||| ||||||||||||    
T  44326260 tgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 44416952 - 44417032
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||  |||||| | |||||||||||||||||    
T  44416952 tgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 31513369 - 31513286
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||| |||||||||||||| |||| ||| |||| || |||| ||||||||| ||||| |||||||||||||||||||||    
T  31513369 tgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcca 31513286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 5015477 - 5015395
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||  |||||| |||   |||||  ||||||| ||||||||||||||||||||    
T  5015477 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 5015395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 9216383 - 9216302
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||| ||||| ||| ||||||| |||| | | || |||||||||||||||||||||||||||||    
T  9216383 tgagatgaacttaccaaaatatctctaatgcat-gggtgtacaataggatataggaataaagggtgttcatgtaacattttcc 9216302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 42972934 - 42972852
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||  |||||| |||   ||||| ||||||||| |||||| ||||||||||||    
T  42972934 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 43317525 - 43317443
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| ||||||||||||||  |||||| |||| |||  |||||||||||||| |||||||||||||||||||||    
T  43317525 tgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 43317443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 24280614 - 24280696
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||||||||  ||| | ||| || |||| |||| ||||||||||||||||||||||| ||||||||||||    
T  24280614 tgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcc 24280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 27393278 - 27393344
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgt 73  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||| | |||| |||||||||||||    
T  27393278 tgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 31408655 - 31408732
Alignment:
Q  11 atgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||| |||||||||||||| |||| ||| || |||| ||||  |||||||| |||||||||||||||||||||||||    
T  31408655 atgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 39998475 - 39998407
Alignment:
Q  22 aaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    |||||||||||||||||| ||||||| |||| | ||||||| ||||  |||||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcca 39998407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 27535249 - 27535331
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| ||  ||| |||| | ||||| ||||  |||||||| ||||||||||||||||||||||||||    
T  27535249 tgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 27535331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 32029837 - 32029908
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgta 80  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||  |||||| |||||||  ||||| |||||    
T  32029837 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 33384953 - 33384870
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatgg-tgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| | || || |||| || ||||||| |||| | |||||||||||||||||||    
T  33384953 tgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcc 33384870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 38160661 - 38160694
Alignment:
Q  56 tgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||| |||||||||||||||||||||||||||||    
T  38160661 tgtaggaataaagggtgttcatgtaacattttcc 38160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 16180375 - 16180454
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| ||||||||||||   |||||| | ||||||| |||  |||||| ||||||| |||||| ||||||||||||    
T  16180375 tgagatgaatttaccaaaatatttataatacgtggggtgtacaatg-ggtgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 38160597 - 38160637
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgta 47  Q
    ||||||||| |||| |||||||||||||||||| |||||||    
T  38160597 tgagatgaagttactaaaatatccctaatacatggggtgta 38160637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 1750496 - 1750412
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||||    
T  1750496 tgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttccat 1750412  T

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Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 16096829 - 16096745
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  16096829 tgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttccat 16096745  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 458
Target Start/End: Original strand, 7794882 - 7795045
Alignment:
Q  295 gatgagatattctgcatgtttgagggagctctagacaatttagggagattaaggcaacaatatggactagccaagtcagccaatgaagttgttttggtga 394  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| || || || |||||||||||  | || || || |||||||| ||| |  |||    
T  7794882 gatgagatattctgcttgtttgaaggatctctagacaatttagggagcttgagacagcaatatggactttcaaaatctgcaaatgaagtagttcttatga 7794981  T
Q  395 ttgaggcttacaaagctttacgtgacagagcaccttatcctcccaatcacgttgttggtcatct 458  Q
    |||||||||||||||||||||| ||  | |||||||| ||| | ||||| |||||||| |||||    
T  7794982 ttgaggcttacaaagctttacgcgatcgtgcaccttaccctgctaatcatgttgttggccatct 7795045  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 12302271 - 12302353
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  ||||||  ||||||||||||||||||||||||||||    
T  12302271 tgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T

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Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 30838714 - 30838632
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| | ||||  ||||||||||||||||||||||||||||    
T  30838714 tgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 30838632  T

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Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 19047239 - 19047158
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||||||||||||||||||||||||||||| |||    |||| ||||||||||||||||||||||||||||    
T  19047239 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

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Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 43490419 - 43490499
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||  | |||| |||||||||||||||||||||||||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

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Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 12415478 - 12415565
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    |||||| || |||||||||| |||||||| ||| ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  12415478 tgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttccataat 12415565  T

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Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 12427538 - 12427625
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    |||||| || |||||||||| |||||||| ||| ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  12427538 tgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttccataat 12427625  T

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Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 43114639 - 43114557
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  43114639 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 43114557  T

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Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 11825672 - 11825752
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  11825672 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 41281992 - 41282072
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| ||| |||||| |||||||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  41281992 tgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 16804050 - 16803968
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| |||||| |||||||| ||| || |||| |||| ||||||||| ||||||||||||||||||||||||||    
T  16804050 tgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16803968  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 16843332 - 16843250
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| |||||| |||||||| ||| || |||| |||| ||||||||| ||||||||||||||||||||||||||    
T  16843332 tgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16843250  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 33229381 - 33229303
Alignment:
Q  10 gatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaat-aaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||||||||| ||||||| |||  |||||| |||| |||||||||||||||| ||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 43335781 - 43335863
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||| || |||| |||  |||||| ||||||| | ||||||| |||||||||||    
T  43335781 tgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcc 43335863  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 966852 - 966939
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    ||||||||| |||||||||  | | |||| ||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||    
T  966852 tgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttaat 966939  T

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Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 14285759 - 14285676
Alignment:
Q  6 ctgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||||||||||||  ||||| |||||||||| |||| ||||||||| |||||||||||  ||||| |||||||    
T  14285759 ctgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttcc 14285676  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 4764744 - 4764826
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||||||||   |||||||| ||||||| |||| |||||| ||||||| |||||| ||||||||||||||    
T  4764744 tgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcc 4764826  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 18491787 - 18491705
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| | | |||| |||  |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  18491787 tgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 18491705  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 6518487 - 6518566
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| ||||  |||||||| |||||| |||||||||||||||||    
T  6518487 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagg-tgttcatgtaacatttt 6518566  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 34895759 - 34895841
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||| || |||||||| ||| ||||||| |||| ||||| ||| |||| ||||||||||||||| |||||    
T  34895759 tgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 34895841  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 34817794 - 34817875
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||||||| |||||||||| | | || | ||| ||||||| |||  ||||| |||||||||||||||||||||||||||||    
T  34817794 tgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 4299438 - 4299518
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||| ||  |||| ||| | ||||| |||| ||||||||| |||||||||||||| |||||||||    
T  4299438 tgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 8896601 - 8896681
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||||| |||| |  |||||||||| |||    ||| ||||||||||||||||||||||||||||    
T  8896601 tgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 13780753 - 13780837
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||| ||| |||||||||||||||  || ||||||| |||  ||||| ||||||||  ||||| ||||||||||||||||    
T  13780753 tgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttccat 13780837  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 42849911 - 42849949
Alignment:
Q  54 ggtgtatgaataaagggtgttcatgtaacattttccata 92  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  42849911 ggtgtaggaataaagggtgttcatgtaacattttccata 42849949  T

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Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 7070449 - 7070413
Alignment:
Q  56 tgtatgaataaagggtgttcatgtaacattttccata 92  Q
    |||||||||||||||||||||||||||||||| ||||    
T  7070449 tgtatgaataaagggtgttcatgtaacatttttcata 7070413  T

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Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 42849876 - 42849916
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgta 47  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  42849876 tgagatgaacttatcaaaatatccctaatacatggggtgta 42849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 4451968 - 4452023
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatga 62  Q
    ||||||||| ||||||||||||||||||| |||| |||||| |||| | |||||||    
T  4451968 tgagatgaatttaccaaaatatccctaatgcatatggtgtacaataagatgtatga 4452023  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 42849994 - 42849964
Alignment:
Q  62 aataaagggtgttcatgtaacattttccata 92  Q
    |||||||||||||||||||||||||||||||    
T  42849994 aataaagggtgttcatgtaacattttccata 42849964  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 39149313 - 39149350
Alignment:
Q  10 gatgaacttaccaaaatatccctaatacatagggtgta 47  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  39149313 gatgaacttaccaaaatatctctaatacataggatgta 39149350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 36168990 - 36169022
Alignment:
Q  61 gaataaagggtgttcatgtaacattttccataa 93  Q
    |||||||||||||| ||||||||||||||||||    
T  36168990 gaataaagggtgtttatgtaacattttccataa 36169022  T

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Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 43571104 - 43571187
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||  |||||| ||||||||||||||||||||||||||||||    
T  43571104 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcca 43571187  T

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Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 5489858 - 5489776
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  | |||| |||||||||||||||||||||||||||||    
T  5489858 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 48119710 - 48119626
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||| |||||||||||||| |||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  48119710 tgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccat 48119626  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 44112759 - 44112677
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  44112759 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 44112677  T

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Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 38336000 - 38335916
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccat 91  Q
    ||||||||| |||||||||||||| |||| ||| || |||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  38336000 tgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttccat 38335916  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 35003376 - 35003293
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||| |||||||||||||| ||||  || ||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  35003376 tgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcca 35003293  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 23989541 - 23989624
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaat-aaagggtgttcatgtaacattttcc 89  Q
    |||||| || |||||||||||||||||||||||||||| || |||   |||||||||| |||||||||||||||||||||||||    
T  23989541 tgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcc 23989624  T

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Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 37814856 - 37814778
Alignment:
Q  11 atgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||| |||||||||||||| |||||||| ||||||| |||  | ||||||||||||||||||| ||||||||||||||    
T  37814856 atgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 41065235 - 41065153
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||||||  ||||||| ||| ||||||| || | ||||||||| ||||||||||||||||||||||||||    
T  41065235 tgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcc 41065153  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 46168465 - 46168383
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||||||| |||| ||| ||||||| |||| | | ||||| ||||||||||||||||||||||||||    
T  46168465 tgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 48498980 - 48499062
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||  |||||| |||   |||||  ||||||| ||||||||||||||||||||    
T  48498980 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 48499062  T

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Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 50448280 - 50448361
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    |||||||||||| ||||||||||||||||||| |||||| |||   |||||  ||||||| |||||||||||||||||||||    
T  50448280 agatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcca 50448361  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 38113213 - 38113295
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| ||  |||| ||| ||||||| |||| ||||||||| |||||||||||||| |||||||||||    
T  38113213 tgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcc 38113295  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 45427763 - 45427845
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||| |||||||| ||| | ||||| |||| ||||||||| |||| ||| |||||||||||||||||    
T  45427763 tgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcc 45427845  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 45639750 - 45639832
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||||||||||||| ||||  || ||||||| |||| | ||||||| ||||| ||||||||||||||||||||    
T  45639750 tgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcc 45639832  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 2497580 - 2497660
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||||||||||||| ||||| || ||||||| |||    |||||||||||| |||||| ||||||||||||    
T  2497580 tgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 24769523 - 24769599
Alignment:
Q  13 gaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||| ||||||| |||   |||||  |||||| |||||||||| ||||||||||    
T  24769523 gaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcc 24769599  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 750323 - 750405
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| |||||||||||| |||||| ||||||| |||  |||||| |||  ||||||||||| ||||||||||||    
T  750323 tgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcc 750405  T

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Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 4401410 - 4401329
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaat-aaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||   ||||| |||| |||| ||||||||||| ||||||    
T  4401410 tgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 26585543 - 26585462
Alignment:
Q  8 gagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||| |||| ||||||||| |||| ||| ||||||| ||||| |||||||| |||||  ||||||| |||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcc 26585462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 7447907 - 7447828
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||| |||||||||  |||||||| ||||||| |||  | |||| ||||||||| |||||||||||||||||    
T  7447907 tgagatgaacttatcaaaatatctgtaatacat-gggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 14427394 - 14427347
Alignment:
Q  42 ggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  14427394 ggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 14427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 35000131 - 35000218
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttccataat 94  Q
    |||||| || ||| |||||| ||||||||||||   || || ||||  |||||||| |||| ||||||||||||||||||||||||||    
T  35000131 tgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttccataat 35000218  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 45705907 - 45705825
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||| |||||| ||| |||| ||| | ||||| ||||   ||||||| |||||||||||||| |||||||||||    
T  45705907 tgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcc 45705825  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 4888125 - 4888093
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacat 39  Q
    |||||| ||||||||||||||||||||||||||    
T  4888125 tgagataaacttaccaaaatatccctaatacat 4888093  T

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Target: scaffold0119 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 767 - 685
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||  |||||| |||  |||||| |||||||||||||||||||||||||||||    
T  767 tgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 112737 - 112656
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||||||||||||||||||||||||||||| |||    |||| ||||||||||||||||||||||||||||    
T  112737 tgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 45737 - 45817
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacatttt 87  Q
    ||||||||| |||||||||||||| ||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||    
T  45737 tgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 11333 - 11251
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||| || ||||||| |||  ||||||||||||||| |||||||||| |||||||||    
T  11333 tgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcc 11251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 14206 - 14288
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||  ||||||  ||||||||||||||||||||||||||||    
T  14206 tgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 24534 - 24616
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||  ||||||  ||||||||||||||||||||||||||||    
T  24534 tgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35474 - 35557
Alignment:
Q  7 tgagatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||| ||||||| || |||||||| ||| ||||||| |||||||||||||| |||| |||||| |||||||||||||||    
T  35474 tgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcca 35557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 23441 - 23522
Alignment:
Q  9 agatgaacttaccaaaatatccctaatacatagggtgtataatatggtgtatgaataaagggtgttcatgtaacattttcca 90  Q
    ||||||||||||||||||||| ||||||||| || |||| |||   ||||| ||||||||||||||||| ||||||||||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcca 23522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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