View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21383_low_16 (Length: 298)
Name: NF21383_low_16
Description: NF21383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21383_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 3338889 - 3338617
Alignment:
| Q |
22 |
tgagacatctttatttattcgttgtagcttggccattggattgggatttccaaacgtgcttattagagctttataaatagtgaaatcatactcctaccac |
121 |
Q |
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| T |
3338889 |
tgagacatctttatttattcgttgtagcttggccattggattgggatttccaaacgtgcttattagagctttataaatagtgaaatcatactcctaccac |
3338790 |
T |
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| Q |
122 |
tttttgaaaaccttaattcttcccctttggcattgcttgctaccctgagtttttcctgtgtttgttttggaaggggtggttattaattggagcctttgtt |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3338789 |
tttttgaaaaccttaattcttcccctttggcattgcttgctcccctgagtttttcctgtgtttgttttggaaggggtggttattaattggagcctttgtt |
3338690 |
T |
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| Q |
222 |
ccttg-gnnnnnnnnccatgctgtgttcaggttttcagggcctgttttgttctcttgctcaccctttgcttct |
293 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
3338689 |
ccttgttttttttttccatgctgtgttcaggttttcagggcctgttttgttctcttgctcaccctttccttct |
3338617 |
T |
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