View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21385_low_10 (Length: 321)
Name: NF21385_low_10
Description: NF21385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21385_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 31 - 308
Target Start/End: Complemental strand, 43575826 - 43575549
Alignment:
| Q |
31 |
ggtagagttatcacacaaaatagaaaaaattacaagcaattgctaattatatatgcacacacattctacgtgtgtttgtgtgtatagtacatatctacct |
130 |
Q |
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| T |
43575826 |
ggtagagttatcacacaaaatagaaaaaattacaagcaattgctaattatatatgcacacacattctacgtgtgtttgtatgtatagtacatatctacct |
43575727 |
T |
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| Q |
131 |
tgacatgaataagttaggttcaaagtaacgttttaagatggtatacccaaaatgaattaagatacaagcgtttgatattatcaacaaagtgtataagtag |
230 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| |
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| T |
43575726 |
tgacatgaataagttaggttcaaagtaacgttttaagaaggtatacccaaaatgaattaagatacaagcatttgatattatcaacaaaatgtataattag |
43575627 |
T |
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| Q |
231 |
ttaacttaccagtcaaattatcaaactaccattcttctacgacttcagcagcctaatttattatcagatttccagctc |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
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| T |
43575626 |
ttaacttaccagtcaaattatcaaactaccattcttctacgatttcagcagcctaatttattatcagatttcaagctc |
43575549 |
T |
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