View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21386_high_3 (Length: 239)
Name: NF21386_high_3
Description: NF21386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21386_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 55301265 - 55301044
Alignment:
| Q |
1 |
tatttggttgcccacagatactcatacatacttcctgcctcagccgtgttcatcgacttatgctcacaaggtaattccattgacactgtttgttcagaag |
100 |
Q |
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|||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55301265 |
tatttggttgcccacagatactcatacatatttccttccacagccgtgttcatcgacttatgctcacaaggtaattccattgacactgtttgttcagaag |
55301166 |
T |
|
| Q |
101 |
cagtcttttgaccacccaaccaaaagtctctgagttcctctttcaaatctgttgtctctgtatttattagtacattctcattcccaacttgtgacgcacg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55301165 |
cagtcttttgaccacccaaccaaaagtctctgagttcctctttcaaacctgttgtctctgtatttattagtacattctcattcccaacttgtgacgcacg |
55301066 |
T |
|
| Q |
201 |
actctctctcaatggcttctct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
55301065 |
actctctctcaatggcttctct |
55301044 |
T |
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