View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21388_low_20 (Length: 205)
Name: NF21388_low_20
Description: NF21388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21388_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 41698296 - 41698466
Alignment:
| Q |
15 |
agcaaagggtctaagctgattttgaagtatggtgtcatcagccactctgttttttatcctttgggagaatctttggcctattaagaaacccatttcgtat |
114 |
Q |
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| T |
41698296 |
agcaaagggtctaagctgattttgaagtatggtgtcatcagccactctgttttttatcctttgggagaatctttggcctattaagaaacccatttcgtat |
41698395 |
T |
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| Q |
115 |
gaatctttgcatggtccaacttcaaacatctcaagtttttcacgttccattccaaagctctgtggccaagt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41698396 |
gaatctttgcatggtccaacttcaaacatctcaagtttttcacgttccattccaaagctctgtggccaagt |
41698466 |
T |
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