View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2138_high_55 (Length: 231)
Name: NF2138_high_55
Description: NF2138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2138_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 45740036 - 45740238
Alignment:
| Q |
13 |
tcagcgtagctccattacacacccaatgagaactgataagtgtcaaaatcttgcaatgaatattcacaacaaacaaaccacgatcaaagggtagttgggt |
112 |
Q |
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| T |
45740036 |
tcagcgtagctccattacacacccaatgagaactgataagtgtcaaaatcttgcaatgaatattcacaacaaacaaaccacgatcaaagggtagttgggt |
45740135 |
T |
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| Q |
113 |
tctagatgacaactattgagtgcattcaaggatcttaatatcaaagcgttcaacaaaataaagcaaagtttccatcatatatgaatgcagaacgtgcaat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45740136 |
tctagatgacaactattgagtgcattcaaggatcttaatatcaaagcgttcaacaaaataaagcaaagtttccatcatatatgaatgcagaacgtgcaat |
45740235 |
T |
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| Q |
213 |
ttg |
215 |
Q |
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| T |
45740236 |
ttg |
45740238 |
T |
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