View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2138_low_39 (Length: 259)
Name: NF2138_low_39
Description: NF2138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2138_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 26 - 250
Target Start/End: Complemental strand, 38932017 - 38931793
Alignment:
| Q |
26 |
tcatgtcatgtagagattttatctagctgggaatccagtaaaacagagtggtagaaagcgtggtgataaagaagaagaaactaacaacatgttcagtggt |
125 |
Q |
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| T |
38932017 |
tcatgtgatgtagagattttatctagctgggaatccagtaaaacagagtggaagaaagcgtggtgataaagaagaagaaactaacaacatgttcagtggt |
38931918 |
T |
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| Q |
126 |
tttgattcacgtttcttgggacaagttttgaaagtgaaagaaagtataattagaaagcttcaatctccagatgaagaacatagaaagcaccaaattatac |
225 |
Q |
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| T |
38931917 |
tttgattcacgtttcttgggacaagttttgaaagtgaaagaaagtataattagaaagcttcaatctcaagatgaacaacatagaaagcaccaaattatac |
38931818 |
T |
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| Q |
226 |
atgttaaaggaggtcttagtattat |
250 |
Q |
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| T |
38931817 |
atgttaaaggaggtcttagtattat |
38931793 |
T |
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