View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2138_low_62 (Length: 219)
Name: NF2138_low_62
Description: NF2138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2138_low_62 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 37493154 - 37493362
Alignment:
| Q |
1 |
caaaacttttccagtgtgcctatgttttccattcacaagactcgaacatgagactgcgtaaagagattcatgctcattgcctcatcgacccacataagtt |
100 |
Q |
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| T |
37493154 |
caaaacttttccagtgtgcctatgttttccattcacaagactcgaacatgagactgcgtaaagagattcatgctcactgcctcatcg----acataagtt |
37493249 |
T |
|
| Q |
101 |
ttaaatttaagatagcacaccaatgatcggcatataatt--tgtgttttattattccgtcatttcaaaatatttatcgttccatgtacttgcaaacatat |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
37493250 |
ttaaatttaagatagcacaccaatgatcggcatataatttgtgtgttttattattccgtcatttcaaaatatttatcgttccatgtactttcaaacatat |
37493349 |
T |
|
| Q |
199 |
tcatagtattatc |
211 |
Q |
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||||||||||||| |
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| T |
37493350 |
tcatagtattatc |
37493362 |
T |
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