View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21390_low_4 (Length: 534)

Name: NF21390_low_4
Description: NF21390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21390_low_4
NF21390_low_4
[»] chr8 (22 HSPs)
chr8 (8-517)||(6332781-6333290)
chr8 (8-517)||(6322197-6322723)
chr8 (8-221)||(6275649-6275862)
chr8 (338-517)||(6275330-6275509)
chr8 (15-221)||(7460565-7460771)
chr8 (22-221)||(6425183-6425382)
chr8 (8-118)||(6371300-6371410)
chr8 (342-517)||(6363969-6364144)
chr8 (13-206)||(6364381-6364574)
chr8 (362-517)||(6353173-6353328)
chr8 (15-125)||(6353589-6353699)
chr8 (342-515)||(7460073-7460246)
chr8 (338-439)||(6289831-6289932)
chr8 (22-231)||(6290391-6290600)
chr8 (364-515)||(7471651-7471800)
chr8 (33-118)||(6264927-6265012)
chr8 (328-455)||(6424909-6425036)
chr8 (15-116)||(6392094-6392195)
chr8 (25-116)||(6411258-6411349)
chr8 (25-115)||(6458262-6458352)
chr8 (369-422)||(6264369-6264422)
chr8 (25-109)||(6452175-6452259)
[»] chr2 (2 HSPs)
chr2 (25-109)||(42694397-42694481)
chr2 (338-448)||(42694042-42694152)


Alignment Details
Target: chr8 (Bit Score: 466; Significance: 0; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 8 - 517
Target Start/End: Complemental strand, 6333290 - 6332781
Alignment:
Q  8 attattctactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaat 107  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6333290 attagtctactacagacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcggataggatctatgactacgatgtttacaat 6333191  T
Q  108 gacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaac 207  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6333190 gacttgggtgatcctgacaagaaagaaagcttggctcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaac 6333091  T
Q  208 atgctaaaaaaggtgataaactttatgctctatcttaagttaacggtcctatgatcaaaacatttcctctatacgattttaaagatattgatcttgttgc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6333090 atgctaaaaaaggtgataaactttatgctctatcttaagttaaaggtcctatgatcaaaacatttcctctatatgattttaaagatattgatcttgttgc 6332991  T
Q  308 taatgtcttatatttgtatgttacagatgataaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttct 407  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6332990 taatgtcttctatttgtatgttacagatgataaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttca 6332891  T
Q  408 gactttcttgtttatatactgaaatcagcatcacaaaatgttatacctcaattacgatctgcacttacattacaattcaatcagccagagtttaacacct 507  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6332890 gactttcttgtttatatactgaaatcagcatctcaaaatgttatacctcaattacgatctgcacttacattacaattcaatcagccagagtttaacactt 6332791  T
Q  508 ttgaagatgt 517  Q
    ||||||||||    
T  6332790 ttgaagatgt 6332781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 8 - 517
Target Start/End: Complemental strand, 6322723 - 6322197
Alignment:
Q  8 attattctactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaat 107  Q
    |||| |||||||  || |||||||||||||||||||||||||||||||||||||| ||||||| |||   ||||| ||||||||||||||||||||||||    
T  6322723 attagtctactatagagaagaagaattgaagactttaagaggagatggaacgggtcagcgcaaggaacacgatagaatctatgactacgatgtttacaat 6322624  T
Q  108 gacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaac 207  Q
    ||||||||||||||||||| | | | |  ||||| |||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||    
T  6322623 gacttgggtgatcctgacaagtacgcacacttggctcgtcccgttattggaggatccgacaccttgccttaccctcgaaggggcagaaccggcaggaaac 6322524  T
Q  208 atgctaaaaaaggtgataaactttatgctctatcttaagttaacggtcctatgatcaaaacatttcctcta-tacgattttaaagatattgatcttgttg 306  Q
      |||||||||||| ||||  || | | || || |||| |||| ||| || |||||||||||||| ||||| || || ||||||| ||| |||||| |||    
T  6322523 cagctaaaaaaggttataattttaaagttccatattaaattaatggtgctgtgatcaaaacattttctctattatgactttaaagttatcgatctttttg 6322424  T
Q  307 cta--------------atgtctt-atatttgtatgt-tacagatgataaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttg 390  Q
    |||               |||||| |  |||||||||  ||||||  |||||||||||| |||  ||||||||||||| |||||||||||||| ||||||    
T  6322423 ctagtacttgctaatgcgtgtcttcaattttgtatgtgaacagatcctaaaagtgagagacgggacgactttgtttacgttccaagagatgaagcatttg 6322324  T
Q  391 gccacttgaagtcttctgactttcttgtttatatactgaaatcagcatcacaaaatgttatacctcaattacgatctgcacttacattacaattcaatca 490  Q
    | |||||||||||||| || ||||||||||| ||||| |||||||| || |||| | | ||||||||||||| ||||||| ||||||||||| ||||| |    
T  6322323 gtcacttgaagtcttcagattttcttgtttacatactcaaatcagcttctcaaagtttcatacctcaattacaatctgcaattacattacaactcaataa 6322224  T
Q  491 gccagagtttaacacctttgaagatgt 517  Q
    |||||| ||||| | |||||| |||||    
T  6322223 gccagaatttaatagctttgatgatgt 6322197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 6275862 - 6275649
Alignment:
Q  8 attattctactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaat 107  Q
    |||| |||||||  |||||||||| ||||| |||||||||||||||||||| || ||||| |||||||  || |||||||||||||||||||| ||||||    
T  6275862 attagtctactatagacaagaagagttgaacactttaagaggagatggaacaggagagcgtaaagaatgggaaaggatctatgactacgatgtctacaat 6275763  T
Q  108 gacttgggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaac 207  Q
    ||  ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  6275762 gatgtgggtgatcctgacaagaaagcaagcttggctcgtcccgttattggaggatccaacaccttgccttaccctcgaagagggagaaccggcaggaaac 6275663  T
Q  208 atgctaaaaaaggt 221  Q
      ||||| ||||||    
T  6275662 cagctaagaaaggt 6275649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 338 - 517
Target Start/End: Complemental strand, 6275509 - 6275330
Alignment:
Q  338 taaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagca 437  Q
    |||||||||||| |||||||| | | ||||  |||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| ||||||| |    
T  6275509 taaaagtgagagacggagcgagtatatttatcttccaagagatgaatcatttggtcacttgaagtcttcagattttcttgtttacatactcaaatcagta 6275410  T
Q  438 tcacaaaatgttatacctcaattacgatctgcacttacattacaattcaatcagccagagtttaacacctttgaagatgt 517  Q
    || |||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||| |||||| |||||    
T  6275409 tctcaaaatgtcatacctcaattacaatctgcaattacattacaattcaataagccagaatttaacagctttgatgatgt 6275330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 7460771 - 7460565
Alignment:
Q  15 tactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgg 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||  || || || ||||| || ||||| |||||||||||||    
T  7460771 tactacagacaagaagaattgaagactttaagaggagatggaacgggagagcgcaaggaatgggacagaatatatgattatgatgtctacaatgacttgg 7460672  T
Q  115 gtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaa 214  Q
    ||||||| |||  |||||  ||||||| |||||| |||| ||||||| |    ||||||||||||||||||||||| ||||||||||| ||||   ||||    
T  7460671 gtgatcccgaccagaaagctagcttggctcgtcctgttgctggaggacctggaaacttgccttaccctcgaaggggaagaaccggcagaaaaccatctaa 7460572  T
Q  215 aaaaggt 221  Q
    |||||||    
T  7460571 aaaaggt 7460565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 6425382 - 6425183
Alignment:
Q  22 gacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtgatcc 121  Q
    |||||||||| |||||||||||||||||||||||||  || |||||||| ||||  || ||||||||||| |||||||| |||||||| |||||||| ||    
T  6425382 gacaagaagagttgaagactttaagaggagatggaaaaggagagcgcaaggaatgggaaaggatctatgattacgatgtctacaatgatttgggtgagcc 6425283  T
Q  122 tgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggt 221  Q
    ||||  ||||   | |||||||||||| ||| |||||||||| |  | ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||    
T  6425282 tgactcgaaacctaccttgggtcgtccagttcttggaggatcgagcaccttgccttaccctcgaagggggagaacaggcagaaaaccagctaaaaaaggt 6425183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 6371410 - 6371300
Alignment:
Q  8 attattctactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaat 107  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  6371410 attagtctactacagacaagaagagttgaagactttaagaggagatggaacgggtgagcgcaaagaatgggataggatctatgactacgatgtctacaat 6371311  T
Q  108 gacttgggtga 118  Q
    || ||||||||    
T  6371310 gatttgggtga 6371300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 342 - 517
Target Start/End: Complemental strand, 6364144 - 6363969
Alignment:
Q  342 agtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagcatcac 441  Q
    ||||||||||| || |||  ||||||| | |||||||||||||||||||| |||   ||||| || |||||||||||| | ||||| ||||| ||||| |    
T  6364144 agtgagagtcgaagtgacactgtttacctcccaagagatgaatcatttggacacacaaagtcatcagactttcttgttcacatactcaaatctgcatctc 6364045  T
Q  442 aaaatgttatacctcaattacgatctgcacttacattacaattcaatcagccagagtttaacacctttgaagatgt 517  Q
    ||||||| ||||||| |||| |||||  | |||||||||||||| || |||| |||||||||||||||||||||||    
T  6364044 aaaatgtcatacctcgattaagatctatagttacattacaattccatgagcctgagtttaacacctttgaagatgt 6363969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 6364574 - 6364381
Alignment:
Q  13 tctactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgactt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || ||||| || ||||  || || || ||||| || ||||| |||||||| ||    
T  6364574 tctactacagacaagaagaattgaagactttaagaggagatggaactggagagcgtaaggaatgggaaagaatatatgattatgatgtctacaatgattt 6364475  T
Q  113 gggtgatcctgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaa 206  Q
    |||||||   |||| ||| |  || |||| |||||| |||||||||||||| |  | | | |||||||||||||| ||||||||||||||||||    
T  6364474 gggtgatgtggacaagaacgctagtttggctcgtcctgttgttggaggatctagcaccctcccttaccctcgaagagggagaaccggcaggaaa 6364381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 362 - 517
Target Start/End: Complemental strand, 6353328 - 6353173
Alignment:
Q  362 tgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagcatcacaaaatgttatacctcaatta 461  Q
    ||||||| |||||||||||||||| ||||| |||   ||||| || |||||||||||||| ||||| ||||||||||| |||||||| ||||||||| |     
T  6353328 tgtttaccttccaagagatgaatcttttggacacacaaagtcatcagactttcttgtttacatactcaaatcagcatctcaaaatgtcatacctcaactg 6353229  T
Q  462 cgatctgcacttacattacaattcaatcagccagagtttaacacctttgaagatgt 517  Q
     |||||| | ||||||||||| ||||| | || ||||||||||||||| |||||||    
T  6353228 agatctgtagttacattacaactcaataaccctgagtttaacacctttcaagatgt 6353173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 6353699 - 6353589
Alignment:
Q  15 tactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgg 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||  || || || ||||| |||||||| |||||||| ||||    
T  6353699 tactacagacaagaagaattgaagactttaagaggagatggaactggagagcgcaaggaatgggaaagaatatatgattacgatgtctacaatgatttgg 6353600  T
Q  115 gtgatcctgac 125  Q
    |||| ||||||    
T  6353599 gtgagcctgac 6353589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 342 - 515
Target Start/End: Complemental strand, 7460246 - 7460073
Alignment:
Q  342 agtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagcatcac 441  Q
    ||||||||||| || |||  | ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||| ||||||||| | |    
T  7460246 agtgagagtcgaagtgacgctatttacgttccaagagatgaatcatttggtcacttgaagtcatctgactttcttggttatgtactcaaatcagcaactc 7460147  T
Q  442 aaaatgttatacctcaattacgatctgcacttacattacaattcaatcagccagagtttaacacctttgaagat 515  Q
    | |  || |||||| | ||  |||||  |  |||||||||| ||||| | || |||||||||||||||||||||    
T  7460146 acagagtcatacctaatttgagatctaaagctacattacaactcaataaccctgagtttaacacctttgaagat 7460073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 6289932 - 6289831
Alignment:
Q  338 taaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagca 437  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||  |||  ||||||||| || ||||||| | |  ||||||||||||||    
T  6289932 taaaagtgagagtcggaacggctttgtttacattccaagagatgaatcatttgatcacaagaagtcttcagaatttcttgataacctactgaaatcagca 6289833  T
Q  438 tc 439  Q
    ||    
T  6289832 tc 6289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 6290600 - 6290391
Alignment:
Q  22 gacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtgatcc 121  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||  || || || ||||| |||||||| |||||||| || ||||| ||    
T  6290600 gacaagaagaattgaagactttaagaggagatggaacaggagagcgcaaggaatgggaaagaatatatgattacgatgtctacaatgatttaggtgagcc 6290501  T
Q  122 tgacaggaaagaaagcttgggtcgtcccgttgttggaggatccaataacttgccttaccctcgaagggggagaaccggcaggaaacatgctaaaaaaggt 221  Q
    ||||  ||||      ||||  ||||   || |||| ||||| |  || || ||||||||||||||||| |||||||||||| |||  ||||| ||||||    
T  6290500 tgactcgaaacctcaattggcgcgtcaaattcttgggggatcgagcaatttcccttaccctcgaaggggaagaaccggcagggaaccagctaagaaaggt 6290401  T
Q  222 gataaacttt 231  Q
     |||||||||    
T  6290400 tataaacttt 6290391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 364 - 515
Target Start/End: Complemental strand, 7471800 - 7471651
Alignment:
Q  364 tttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagcatcacaaaatgttatacctcaattacg 463  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||| ||||||||| | || |  || || ||| | ||  |    
T  7471800 tttacgttccaagagatgaatcatttggtcacttgaagtcatctgactttcttggttatgtactcaaatcagcaactcaga--gtcatgcctaatttgag 7471703  T
Q  464 atctgcacttacattacaattcaatcagccagagtttaacacctttgaagat 515  Q
    ||||  | ||||||||||| ||||| | || |||||||||||||||||||||    
T  7471702 atctaaagttacattacaactcaataaccccgagtttaacacctttgaagat 7471651  T

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Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 6265012 - 6264927
Alignment:
Q  33 ttgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggtga 118  Q
    ||||||||||||||||||||||||||||| |||||||||||||  || ||  | ||||| || |||||||||||||| ||||||||    
T  6265012 ttgaagactttaagaggagatggaacgggggagcgcaaagaatgggacagagtttatgattatgatgtttacaatgatttgggtga 6264927  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 455
Target Start/End: Complemental strand, 6425036 - 6424909
Alignment:
Q  328 ttacagatgataaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatact 427  Q
    ||||||||  ||| |||||||||||||||| |  ||||||| |||||||||||||  ||||||| |||   |||||||| |||||||||| ||  |||||    
T  6425036 ttacagatcctaagagtgagagtcggagcggcactgtttaccttccaagagatgaggcatttggacacacaaagtcttcagactttcttgctttcatact 6424937  T
Q  428 gaaatcagcatcacaaaatgttatacct 455  Q
     ||||||||||| |||||| | ||||||    
T  6424936 caaatcagcatctcaaaatatcatacct 6424909  T

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Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 6392195 - 6392094
Alignment:
Q  15 tactacggacaagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgg 114  Q
    |||||| |||||||||||||||| |||||||||||||||||||| || ||||| || ||||  || || || ||||| || ||||| |||||||| ||||    
T  6392195 tactacagacaagaagaattgaatactttaagaggagatggaactggagagcgtaaggaatgggacagaatatatgattatgatgtctacaatgatttgg 6392096  T
Q  115 gt 116  Q
    ||    
T  6392095 gt 6392094  T

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Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 6411349 - 6411258
Alignment:
Q  25 aagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttgggt 116  Q
    |||||||||||||||||||||||||||||||||| || ||||| || | ||  || || || ||||| || ||||| |||||||| ||||||    
T  6411349 aagaagaattgaagactttaagaggagatggaactggagagcgtaaggtatgggacagaatatatgattatgatgtctacaatgatttgggt 6411258  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 6458352 - 6458262
Alignment:
Q  25 aagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatgacttggg 115  Q
    ||||||| ||| ||||| |||||||||||||||| || |||||||||||| | |||||  | ||||| || ||| |||| ||||| |||||    
T  6458352 aagaagagttgcagactctaagaggagatggaactggagagcgcaaagaagcggatagagtttatgattatgatatttataatgatttggg 6458262  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Complemental strand, 6264422 - 6264369
Alignment:
Q  369 attccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttat 422  Q
    ||||||||||||||| | || ||||||||||| || || |||||||||||||||    
T  6264422 attccaagagatgaagctttcggccacttgaaatcctcagactttcttgtttat 6264369  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 6452259 - 6452175
Alignment:
Q  25 aagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatga 109  Q
    ||||||| ||| ||| | |||||||||||||||| || || ||||||||||  |||||||| || || || |||||||| |||||    
T  6452259 aagaagagttgcagaatctaagaggagatggaaccggagaacgcaaagaatgggataggatatacgattatgatgtttataatga 6452175  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 42694481 - 42694397
Alignment:
Q  25 aagaagaattgaagactttaagaggagatggaacgggtgagcgcaaagaatcagataggatctatgactacgatgtttacaatga 109  Q
    ||||||||||||| | |||||||||||||||||| || || ||||||||||  || || |||||||| || ||||| ||||||||    
T  42694481 aagaagaattgaacaatttaagaggagatggaacaggagaacgcaaagaatgggaaagaatctatgattatgatgtctacaatga 42694397  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 42694152 - 42694042
Alignment:
Q  338 taaaagtgagagtcggagcgactttgtttacattccaagagatgaatcatttggccacttgaagtcttctgactttcttgtttatatactgaaatcagca 437  Q
    ||||||||||||| |||| || ||||| ||  |||||||||||||| | ||||| |||||||| || || || ||||||  ||||  ||||||| ||| |    
T  42694152 taaaagtgagagtaggagtgattttgtgtatcttccaagagatgaagcttttggtcacttgaaatcatcagattttcttacttatggactgaaagcagta 42694053  T
Q  438 tcacaaaatgt 448  Q
    || ||||||||    
T  42694052 tctcaaaatgt 42694042  T

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