View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21391_low_18 (Length: 238)
Name: NF21391_low_18
Description: NF21391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21391_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 41172190 - 41171983
Alignment:
| Q |
16 |
cagatacctagttttcttgatttaggctatattaggttctttaaattcatactgtcgctagatttcaagtgtaatcagattaatttctatttgagttctg |
115 |
Q |
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| T |
41172190 |
cagatacctagttttcttgatttaggctatattaggttctttaaattcatactgtcgctagatttcaagtgtaatcagattaatttctatttgagttctg |
41172091 |
T |
|
| Q |
116 |
tatctgagatgattttaatttctgtttcagctaattatatttaattttgttgtttcttttcattaacgtctagggagtgacctatatatacttgaagcat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41172090 |
tatctgagatgattttaatttctgtttcagctaattatatttaattttgttgtttcttttcattaacgtctagggagtgacctatatatacttgaagcat |
41171991 |
T |
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| Q |
216 |
ataatctg |
223 |
Q |
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|||||||| |
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| T |
41171990 |
ataatctg |
41171983 |
T |
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