View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21392_high_2 (Length: 467)

Name: NF21392_high_2
Description: NF21392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21392_high_2
NF21392_high_2
[»] chr6 (14 HSPs)
chr6 (155-456)||(6320199-6320499)
chr6 (155-318)||(24088418-24088581)
chr6 (2-159)||(6319945-6320104)
chr6 (155-319)||(31768974-31769142)
chr6 (23-159)||(31769237-31769374)
chr6 (23-157)||(24088187-24088321)
chr6 (328-422)||(24088627-24088721)
chr6 (213-316)||(3381049-3381152)
chr6 (228-313)||(30424143-30424228)
chr6 (159-206)||(21600990-21601037)
chr6 (328-391)||(31768867-31768930)
chr6 (155-194)||(3381182-3381221)
chr6 (228-312)||(29821737-29821821)
chr6 (278-315)||(7912702-7912739)
[»] chr8 (51 HSPs)
chr8 (155-450)||(5303857-5304135)
chr8 (155-318)||(39846622-39846785)
chr8 (155-319)||(39601988-39602152)
chr8 (155-319)||(40076886-40077050)
chr8 (155-319)||(41249709-41249873)
chr8 (155-319)||(43188322-43188486)
chr8 (155-319)||(15036364-15036528)
chr8 (155-319)||(34822653-34822817)
chr8 (155-319)||(43211778-43211942)
chr8 (155-319)||(39252285-39252448)
chr8 (155-319)||(39938852-39939016)
chr8 (2-159)||(40076641-40076800)
chr8 (165-319)||(45064514-45064668)
chr8 (2-159)||(43188581-43188740)
chr8 (2-159)||(15036109-15036269)
chr8 (2-159)||(34822398-34822558)
chr8 (2-159)||(43212037-43212197)
chr8 (188-319)||(25864609-25864739)
chr8 (2-159)||(39252534-39252694)
chr8 (2-159)||(45064762-45064922)
chr8 (2-159)||(39938599-39938757)
chr8 (155-316)||(42485174-42485335)
chr8 (328-450)||(40077093-40077215)
chr8 (159-316)||(24249759-24249915)
chr8 (155-316)||(489265-489426)
chr8 (328-441)||(43188166-43188279)
chr8 (328-448)||(25864782-25864902)
chr8 (328-441)||(39846832-39846945)
chr8 (2-159)||(39846381-39846527)
chr8 (328-427)||(39601834-39601933)
chr8 (328-427)||(42485380-42485479)
chr8 (2-159)||(5303621-5303762)
chr8 (234-316)||(37327080-37327161)
chr8 (328-438)||(41249916-41250026)
chr8 (328-422)||(45064377-45064471)
chr8 (328-419)||(489471-489562)
chr8 (249-441)||(35026604-35026786)
chr8 (2-159)||(41249489-41249630)
chr8 (328-427)||(39939059-39939158)
chr8 (257-319)||(2984395-2984457)
chr8 (328-422)||(15036571-15036665)
chr8 (328-414)||(39252153-39252239)
chr8 (328-441)||(43211624-43211736)
chr8 (328-422)||(34822861-34822957)
chr8 (155-211)||(37327164-37327220)
chr8 (227-283)||(22495216-22495272)
chr8 (102-159)||(489112-489171)
chr8 (102-159)||(42485012-42485071)
chr8 (159-206)||(35552051-35552098)
chr8 (259-316)||(45128025-45128082)
chr8 (103-139)||(37327264-37327300)
[»] chr4 (59 HSPs)
chr4 (155-319)||(55407423-55407587)
chr4 (155-319)||(51683475-51683639)
chr4 (155-319)||(48256207-48256371)
chr4 (156-319)||(50275007-50275170)
chr4 (155-316)||(21022524-21022685)
chr4 (155-319)||(67864-68028)
chr4 (155-319)||(50901753-50901917)
chr4 (155-319)||(37021719-37021883)
chr4 (2-159)||(51683734-51683893)
chr4 (2-159)||(50902011-50902170)
chr4 (155-319)||(40357916-40358080)
chr4 (2-159)||(48255953-48256112)
chr4 (2-159)||(55407169-55407328)
chr4 (2-159)||(21022270-21022430)
chr4 (2-159)||(40357662-40357822)
chr4 (155-316)||(46436521-46436681)
chr4 (328-452)||(48256415-48256539)
chr4 (2-141)||(68070-68211)
chr4 (155-316)||(30726377-30726538)
chr4 (155-316)||(1308750-1308911)
chr4 (328-441)||(8109510-8109623)
chr4 (6-141)||(37021463-37021601)
chr4 (328-450)||(51683309-51683430)
chr4 (155-316)||(1089220-1089381)
chr4 (328-443)||(67707-67822)
chr4 (328-422)||(55407634-55407728)
chr4 (328-427)||(1308956-1309055)
chr4 (328-438)||(50274854-50274964)
chr4 (328-427)||(1089426-1089525)
chr4 (328-427)||(30726583-30726682)
chr4 (328-427)||(40358123-40358222)
chr4 (155-316)||(14297401-14297572)
chr4 (155-316)||(14315650-14315821)
chr4 (328-422)||(21022731-21022825)
chr4 (2-159)||(50275266-50275407)
chr4 (159-316)||(11083646-11083813)
chr4 (159-315)||(21538092-21538258)
chr4 (328-421)||(21538304-21538397)
chr4 (155-316)||(10753063-10753234)
chr4 (155-316)||(10966832-10967003)
chr4 (234-314)||(4720083-4720163)
chr4 (356-414)||(37021933-37021991)
chr4 (155-206)||(41798631-41798682)
chr4 (328-419)||(50901620-50901711)
chr4 (159-206)||(11050163-11050210)
chr4 (102-159)||(1089067-1089126)
chr4 (102-159)||(1308597-1308656)
chr4 (343-391)||(11083873-11083921)
chr4 (102-151)||(30726224-30726275)
chr4 (343-391)||(46436412-46436460)
chr4 (159-206)||(9892908-9892955)
chr4 (259-314)||(30704301-30704356)
chr4 (159-206)||(50023183-50023230)
chr4 (159-206)||(50030301-50030348)
chr4 (259-316)||(41933363-41933420)
chr4 (343-392)||(41933480-41933528)
chr4 (153-206)||(49165419-49165472)
chr4 (343-391)||(14315542-14315590)
chr4 (103-139)||(46436725-46436761)
[»] chr1 (56 HSPs)
chr1 (155-319)||(35258509-35258673)
chr1 (155-319)||(45825149-45825313)
chr1 (155-319)||(47502588-47502752)
chr1 (156-319)||(19527180-19527343)
chr1 (155-318)||(51320988-51321151)
chr1 (155-319)||(23275739-23275904)
chr1 (155-319)||(31783364-31783528)
chr1 (2-159)||(45825409-45825568)
chr1 (155-319)||(52802404-52802568)
chr1 (2-159)||(31783109-31783269)
chr1 (2-159)||(19526925-19527084)
chr1 (2-148)||(19526738-19526886)
chr1 (2-159)||(51321246-51321404)
chr1 (328-450)||(23275951-23276073)
chr1 (328-456)||(35258715-35258843)
chr1 (34-159)||(35258289-35258414)
chr1 (2-148)||(19525416-19525564)
chr1 (2-148)||(19526551-19526699)
chr1 (155-316)||(19925018-19925179)
chr1 (155-316)||(30890337-30890498)
chr1 (2-159)||(52802663-52802823)
chr1 (2-148)||(19524568-19524716)
chr1 (2-148)||(19524755-19524903)
chr1 (155-316)||(49857579-49857740)
chr1 (328-426)||(11183310-11183408)
chr1 (200-319)||(29622105-29622224)
chr1 (328-438)||(47502435-47502545)
chr1 (2-158)||(23275504-23275644)
chr1 (224-319)||(11183454-11183549)
chr1 (228-319)||(11196153-11196244)
chr1 (341-452)||(51320821-51320931)
chr1 (328-441)||(52802249-52802360)
chr1 (328-427)||(30890193-30890292)
chr1 (328-430)||(22524255-22524357)
chr1 (328-432)||(45825013-45825117)
chr1 (328-427)||(29622267-29622366)
chr1 (2-159)||(47502835-47502976)
chr1 (328-427)||(19924888-19924987)
chr1 (2-104)||(11196268-11196372)
chr1 (328-427)||(2425529-2425628)
chr1 (2-97)||(19524942-19525039)
chr1 (2-97)||(19525603-19525700)
chr1 (2-97)||(19526077-19526174)
chr1 (257-319)||(22524399-22524461)
chr1 (5-75)||(49857382-49857454)
chr1 (257-319)||(2425113-2425175)
chr1 (159-310)||(17514336-17514497)
chr1 (356-427)||(31783587-31783658)
chr1 (102-159)||(19925273-19925332)
chr1 (102-159)||(30890592-30890651)
chr1 (259-314)||(38127223-38127278)
chr1 (208-314)||(25147571-25147676)
chr1 (2-51)||(2424590-2424641)
chr1 (159-206)||(2365622-2365669)
chr1 (159-206)||(19156401-19156448)
chr1 (2-51)||(22524871-22524922)
[»] chr5 (41 HSPs)
chr5 (155-318)||(512408-512571)
chr5 (155-315)||(19228308-19228468)
chr5 (155-319)||(42537422-42537586)
chr5 (155-319)||(38968370-38968535)
chr5 (155-319)||(7757597-7757761)
chr5 (155-319)||(42942122-42942286)
chr5 (155-319)||(14325-14489)
chr5 (155-319)||(8580141-8580305)
chr5 (328-456)||(38968197-38968325)
chr5 (328-450)||(19228515-19228637)
chr5 (155-316)||(8701860-8702021)
chr5 (2-159)||(28877174-28877334)
chr5 (2-159)||(8701606-8701765)
chr5 (155-319)||(28876916-28877080)
chr5 (2-159)||(42537681-42537840)
chr5 (2-159)||(42941869-42942028)
chr5 (2-159)||(7757856-7758016)
chr5 (2-159)||(17658854-17659013)
chr5 (2-159)||(38968630-38968789)
chr5 (2-159)||(8579887-8580047)
chr5 (328-450)||(512615-512737)
chr5 (155-316)||(17658598-17658759)
chr5 (155-316)||(28241435-28241596)
chr5 (155-316)||(40624550-40624720)
chr5 (328-427)||(28241641-28241740)
chr5 (216-316)||(20422215-20422315)
chr5 (60-159)||(512214-512313)
chr5 (328-427)||(7757455-7757554)
chr5 (328-450)||(42537250-42537373)
chr5 (328-427)||(14532-14631)
chr5 (328-422)||(8580348-8580442)
chr5 (2-80)||(14177-14257)
chr5 (328-427)||(28876774-28876873)
chr5 (90-159)||(19228144-19228213)
chr5 (155-206)||(19040753-19040804)
chr5 (328-381)||(42942330-42942383)
chr5 (102-159)||(28241282-28241341)
chr5 (343-391)||(40624781-40624829)
chr5 (159-206)||(5197359-5197406)
chr5 (159-206)||(27673293-27673340)
chr5 (330-391)||(8702068-8702129)
[»] chr3 (62 HSPs)
chr3 (155-319)||(20917653-20917817)
chr3 (155-319)||(20926615-20926779)
chr3 (155-319)||(49196083-49196247)
chr3 (155-319)||(42756426-42756590)
chr3 (155-319)||(50963227-50963391)
chr3 (155-319)||(4007959-4008123)
chr3 (155-319)||(42165435-42165599)
chr3 (155-319)||(48889016-48889180)
chr3 (155-319)||(51807242-51807406)
chr3 (155-317)||(44229988-44230150)
chr3 (155-319)||(30255638-30255802)
chr3 (156-319)||(50216515-50216678)
chr3 (155-318)||(47073843-47074006)
chr3 (155-319)||(3501528-3501692)
chr3 (2-159)||(44230245-44230404)
chr3 (328-452)||(48888842-48888966)
chr3 (159-319)||(597031-597191)
chr3 (155-319)||(3975979-3976143)
chr3 (2-159)||(30255384-30255543)
chr3 (328-456)||(30255845-30255973)
chr3 (2-159)||(3976238-3976398)
chr3 (2-159)||(42165694-42165854)
chr3 (2-159)||(48889266-48889425)
chr3 (5-159)||(20917400-20917558)
chr3 (5-159)||(20926362-20926520)
chr3 (155-319)||(42805898-42806054)
chr3 (2-159)||(4007704-4007864)
chr3 (2-159)||(42756683-42756842)
chr3 (2-159)||(42805643-42805803)
chr3 (23-159)||(47073611-47073748)
chr3 (2-159)||(48563459-48563618)
chr3 (328-450)||(42756261-42756383)
chr3 (2-158)||(50963486-50963649)
chr3 (155-319)||(48563216-48563364)
chr3 (328-450)||(48563050-48563172)
chr3 (23-132)||(49268673-49268782)
chr3 (331-443)||(20917862-20917974)
chr3 (331-443)||(20926824-20926936)
chr3 (328-438)||(51807089-51807199)
chr3 (332-422)||(49196294-49196384)
chr3 (328-427)||(50216723-50216822)
chr3 (328-422)||(3501737-3501831)
chr3 (328-427)||(50963085-50963184)
chr3 (328-409)||(596908-596989)
chr3 (2-159)||(49195847-49195988)
chr3 (90-151)||(54681977-54682038)
chr3 (328-396)||(44229877-44229945)
chr3 (328-407)||(47074052-47074131)
chr3 (328-427)||(3975837-3975936)
chr3 (328-427)||(4008166-4008265)
chr3 (328-427)||(42165294-42165393)
chr3 (159-314)||(31045234-31045388)
chr3 (352-422)||(42807498-42807568)
chr3 (3-80)||(50216322-50216401)
chr3 (159-206)||(52391036-52391083)
chr3 (2-51)||(597541-597592)
chr3 (393-441)||(44227231-44227279)
chr3 (159-206)||(16611463-16611510)
chr3 (159-206)||(22047743-22047790)
chr3 (159-206)||(36127822-36127869)
chr3 (159-206)||(41612753-41612800)
chr3 (364-427)||(2647828-2647891)
[»] chr7 (43 HSPs)
chr7 (155-319)||(39460801-39460965)
chr7 (155-319)||(10517253-10517417)
chr7 (155-319)||(47776607-47776771)
chr7 (156-319)||(34738639-34738802)
chr7 (155-319)||(17835349-17835513)
chr7 (155-316)||(36977874-36978035)
chr7 (155-319)||(9494431-9494595)
chr7 (155-319)||(27453255-27453419)
chr7 (155-315)||(47672721-47672881)
chr7 (155-315)||(37340581-37340741)
chr7 (2-159)||(47776866-47777025)
chr7 (2-159)||(9494178-9494337)
chr7 (23-159)||(27453024-27453160)
chr7 (2-159)||(36978130-36978289)
chr7 (328-452)||(37340410-37340534)
chr7 (328-456)||(9494649-9494777)
chr7 (2-159)||(37340836-37340995)
chr7 (155-316)||(15073864-15074025)
chr7 (2-159)||(17835608-17835768)
chr7 (2-159)||(34738898-34739057)
chr7 (155-313)||(42507663-42507821)
chr7 (39-159)||(47672506-47672626)
chr7 (328-441)||(39460645-39460758)
chr7 (328-421)||(36977733-36977826)
chr7 (155-283)||(14689694-14689822)
chr7 (328-438)||(47776453-47776563)
chr7 (2-151)||(14689447-14689591)
chr7 (328-438)||(27453462-27453572)
chr7 (328-427)||(15074070-15074169)
chr7 (328-427)||(17835208-17835306)
chr7 (328-438)||(34738484-34738594)
chr7 (328-404)||(47672928-47673004)
chr7 (328-427)||(42507869-42507968)
chr7 (23-159)||(39461060-39461178)
chr7 (328-426)||(10517113-10517211)
chr7 (223-316)||(17741162-17741255)
chr7 (102-159)||(15073711-15073770)
chr7 (102-159)||(42507510-42507569)
chr7 (159-206)||(17741088-17741135)
chr7 (259-314)||(41734441-41734496)
chr7 (122-159)||(10517512-10517549)
chr7 (159-206)||(556286-556333)
chr7 (343-401)||(17741315-17741373)
[»] chr2 (31 HSPs)
chr2 (155-319)||(21998463-21998627)
chr2 (155-318)||(7185303-7185466)
chr2 (155-318)||(25965094-25965257)
chr2 (155-319)||(39947873-39948037)
chr2 (155-319)||(28468914-28469078)
chr2 (155-319)||(32955990-32956154)
chr2 (155-319)||(17420840-17421004)
chr2 (2-159)||(45136685-45136844)
chr2 (155-319)||(45428864-45429028)
chr2 (2-159)||(45429122-45429282)
chr2 (2-159)||(39948132-39948292)
chr2 (2-159)||(28469172-28469332)
chr2 (2-147)||(32955740-32955888)
chr2 (2-159)||(22686910-22687070)
chr2 (190-319)||(45137103-45137232)
chr2 (328-441)||(25964929-25965042)
chr2 (328-438)||(45137275-45137385)
chr2 (329-430)||(28468769-28468870)
chr2 (328-419)||(42505604-42505695)
chr2 (328-422)||(21998326-21998420)
chr2 (328-427)||(7185159-7185258)
chr2 (328-406)||(45428742-45428820)
chr2 (328-409)||(39947748-39947829)
chr2 (223-313)||(31367308-31367398)
chr2 (328-391)||(32956198-32956261)
chr2 (228-313)||(35464313-35464398)
chr2 (102-159)||(17421098-17421157)
chr2 (259-316)||(25515549-25515606)
chr2 (328-368)||(17420757-17420797)
chr2 (159-206)||(20938282-20938329)
chr2 (159-206)||(29401244-29401291)
[»] scaffold0634 (3 HSPs)
scaffold0634 (155-319)||(7691-7855)
scaffold0634 (2-139)||(7899-8039)
scaffold0634 (328-422)||(7554-7648)
[»] scaffold0180 (3 HSPs)
scaffold0180 (155-319)||(15259-15423)
scaffold0180 (2-159)||(15003-15164)
scaffold0180 (328-427)||(15465-15564)
[»] scaffold0293 (3 HSPs)
scaffold0293 (155-319)||(364-528)
scaffold0293 (328-406)||(565-643)
scaffold0293 (122-159)||(233-270)
[»] scaffold0155 (5 HSPs)
scaffold0155 (213-319)||(8476-8582)
scaffold0155 (328-449)||(8311-8434)
scaffold0155 (84-141)||(10833-10890)
scaffold0155 (26-75)||(10881-10930)
scaffold0155 (155-185)||(10761-10791)
[»] scaffold0101 (2 HSPs)
scaffold0101 (328-427)||(40877-40976)
scaffold0101 (234-316)||(40750-40832)
[»] scaffold0184 (1 HSPs)
scaffold0184 (328-427)||(18138-18237)
[»] scaffold0078 (1 HSPs)
scaffold0078 (328-427)||(54607-54706)
[»] scaffold0007 (1 HSPs)
scaffold0007 (159-314)||(251116-251270)
[»] scaffold0238 (1 HSPs)
scaffold0238 (159-205)||(18573-18619)


Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-140; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 155 - 456
Target Start/End: Original strand, 6320199 - 6320499
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6320199 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 6320298  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaannnnnnnnaaaatgattgatacaacttacttgtga 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  6320299 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa-ttttttaaaaatgattgatacaacttacttgtga 6320397  T
Q  355 taatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttggagaagttttgaaactgatatgtgtct 454  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  6320398 taatgtgcagttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtttggagaagttttgaaactgatgtgtttct 6320497  T
Q  455 gt 456  Q
    ||    
T  6320498 gt 6320499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 24088418 - 24088581
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  24088418 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacattcatttatcaattcataaa 24088517  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24088518 ctacacatgcaattatcaaattgtcaattttaaaatcaacactaaccacatgcaaactactcta 24088581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 6319945 - 6320104
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  6319945 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaattatttctatatacttaatcatttgtgtcc 6320044  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6320045 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 6320104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 31769142 - 31768974
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||  ||||||||| |||||||| ||||||| ||||    
T  31769142 tataaaacatattcaaattgtgttcttttgccaccattcaaaaccacattatgatttaaacaacataagcaacaactacattcatttgtcaattcctaaa 31769043  T
Q  255 ctacacat----gcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    | ||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31769042 ccacacatgcaagcaatcatcaaattgtcgattttaaaatcaaccctaaccacatgcaaactactctaa 31768974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 31769374 - 31769237
Alignment:
Q  23 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtccatcataattctcgtaacctaaa 121  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |  ||| | ||||||||||||||||||||||||||||||||    
T  31769374 atttccataataacataaatatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtccatcataattctcgtaacctaaa 31769275  T
Q  122 ctaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31769274 ctaactaaaaaatcaatatacacttaaccaaactataa 31769237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 24088187 - 24088321
Alignment:
Q  23 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaac 122  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||    
T  24088187 atttccatcataacctaaacatcattcaataattaacatacactgaatcatttctatacacttaatcatttgtgtccatcataattctcataacctaaac 24088286  T
Q  123 taactaaaaaatcaatatacacttaaccacactat 157  Q
    |||||||||||||||||||||| ||| || |||||    
T  24088287 taactaaaaaatcaatatacacctaatcaaactat 24088321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 24088627 - 24088721
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||||  |||| |||||| |||| |||||||    
T  24088627 aaaatgattgatacaacttatttgtgataatttgcggttgatttgcttgcaattcgtgaaaataactttaatgaaaattggagagaaattgagaa 24088721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 316
Target Start/End: Complemental strand, 3381152 - 3381049
Alignment:
Q  213 aacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 312  Q
    |||| ||||| ||||||||| ||||||| |||||| ||||||||||||||||||| || ||||||||||||     || || |||||||||||||||| |    
T  3381152 aacagcataggcaacaactatattcattcatcaatgcataaactacacatgcaatgatgaaattgtcaattcacttataaaacctaaccacatgcaaatt 3381053  T
Q  313 actc 316  Q
    ||||    
T  3381052 actc 3381049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 30424143 - 30424228
Alignment:
Q  228 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaacta 313  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||| ||||||||   | || ||| ||||||||||||| ||||    
T  30424143 aactacattcatttatcaattcctaaactatacatgcaatcatcaaaatgtcaattcatacataaactctaaccacatgcacacta 30424228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 21601037 - 21600990
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  21601037 aaacatattcaaattgtgttcatttgtcaccattcaaaaccacattat 21600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 31768930 - 31768867
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||  ||||||||    
T  31768930 aaaatgattgacacaacttacttgtgataatgtgcaatctatttgcttgcaatttatgaaaatg 31768867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 3381221 - 3381182
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattca 194  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  3381221 tataaaacatattcaaattgtgttcatttgacaccattca 3381182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 29821737 - 29821821
Alignment:
Q  228 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 312  Q
    ||||| |||||||| | |||||||||| ||||||| || | |||||| ||||||||   | ||||||||||||||||| ||||||    
T  29821737 aactacattcatttctaaattcataaattacacatacatttatcaaaatgtcaattcctagatcaaccctaaccacatacaaact 29821821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 7912739 - 7912702
Alignment:
Q  278 tcaattttaaaatcaaccctaaccacatgcaaactact 315  Q
    ||||||| || |||||||||||||||||||||||||||    
T  7912739 tcaatttcaacatcaaccctaaccacatgcaaactact 7912702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 155 - 450
Target Start/End: Original strand, 5303857 - 5304135
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5303857 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaa 5303956  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaannnnnnnnaaaatgattgatacaacttacttgtga 354  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||                   |||||||||||||||||||||||||||    
T  5303957 ctacacatgcaatcatgaaattgtcaattttaaaatcaaccctaaccacatgca-----------------ttaaaatgattgatacaacttacttgtga 5304039  T
Q  355 taatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttggagaagttttgaaactgatatgt 450  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  5304040 taatgtgcagttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtttggagaattcttgaaactgaaatgt 5304135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 39846622 - 39846785
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39846622 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39846721  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39846722 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 39846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 39602152 - 39601988
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39602152 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39602053  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39602052 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 39601988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 40076886 - 40077050
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||    
T  40076886 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacagctacattcatttatcaattcataaa 40076985  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40076986 ctacacatataatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 40077050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 41249709 - 41249873
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  41249709 tataaagcatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 41249808  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41249809 ctacacatgcaatcatcaaattgtcaattttaaaatctaccctaaccacatgcaaactactctaa 41249873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 43188486 - 43188322
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  43188486 tataaaacatattcaaatcgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttattaattcctaaa 43188387  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43188386 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactactctaa 43188322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 15036364 - 15036528
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| | ||    
T  15036364 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctgaa 15036463  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  15036464 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaaccactctaa 15036528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 34822653 - 34822817
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||| |||||||||||||||||   ||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||    
T  34822653 tataaaacatatttaaattgtgttcatttgcagtcattcaaagccacattatgatttaaccaacataggcaacaactacattcatttatcaattcataaa 34822752  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34822753 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 34822817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 43211942 - 43211778
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  43211942 tataaaacatattcaaattgtgttcatttcccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 43211843  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  43211842 ctacacatgcaatcatcgaattgtcaattttaaaatcaaccctaagcacatacaaactactctaa 43211778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 39252448 - 39252285
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||| ||||| ||||    
T  39252448 tataaaacatattcaaattgtattcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttattaattcctaaa 39252349  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  39252348 ctacacatgcaatcatcaaattgtcaattttaaaatcaa-cctaaccacatacaaactactctaa 39252285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 39938852 - 39939016
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39938852 tataaaacttattcaaattgtgttcatttgccaccattcaaagccccattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39938951  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39938952 ctatacatgtaatcatcaaattatcaattttaaaatcaaccctaaccacatgtaaactactctaa 39939016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 40076641 - 40076800
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  40076641 ttacaataaaatttatgtccatcatttccataataacttaaacatcattcaataattaacatacacttaatcatttctatacacttaattatttgtgtcc 40076740  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  40076741 atcataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 40076800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 45064668 - 45064514
Alignment:
Q  165 attcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgc 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||| |||||||||  ||||||||||||||    
T  45064668 attcaaattgtgttcatttgccaccattcaaagccacattaagatttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgc 45064569  T
Q  265 aatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  45064568 aatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 45064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 43188740 - 43188581
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||    
T  43188740 ttacaataaaatttatgttcatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtttcc 43188641  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  43188640 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaatcaaactataa 43188581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 15036109 - 15036269
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  15036109 ttacaataaaatttatgtccatcatttcgataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 15036208  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15036209 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 15036269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 34822398 - 34822558
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  34822398 ttacaataaaatttatgtccatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 34822497  T
Q  100 atcataattctcgtaacctaaactaact-aaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  34822498 atcataattctcataacctaaactaactaaaaaaatcaatatacacttaaccaaactataa 34822558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 43212197 - 43212037
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  43212197 ttacaataaaatttatgtccatcatttccataataacttaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 43212098  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43212097 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 43212037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 188 - 319
Target Start/End: Original strand, 25864609 - 25864739
Alignment:
Q  188 ccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaa 287  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25864609 ccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataa-ctacacatgcaatcatcaaattgtcaattttaa 25864707  T
Q  288 aatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||    
T  25864708 aatcaaccctaaccacatgcaaactactctaa 25864739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 39252694 - 39252534
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||| | |||||||||    
T  39252694 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttgatcatttctatacaactaaatcatttgtgtc 39252595  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  39252594 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttgaccaaactataa 39252534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 45064922 - 45064762
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| ||||||| |  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  45064922 ttacaataaaatttatgtctatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 45064823  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  45064822 catcataattctcctaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 45064762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 39938599 - 39938757
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||   ||||| ||||||||||    
T  39938599 ttacaataaaatttatttccatcatttccataataacctaaacatcattcattaattaacacacacttaatcatttctatacc-ttaatcatttgtgtcc 39938697  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  39938698 atcataattctcgtaacctacactaactaaaaaatcaatatacacttaatcaaactataa 39938757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 42485174 - 42485335
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  42485174 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 42485273  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  42485274 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 42485335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 40077093 - 40077215
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  40077093 aaaatgattgatacaacttacttctgataatgtgcacttgatttgcttgcaattcgtgaaaatggctttgttgaagattggaaagaattagagaagtttg 40077192  T
Q  428 gagaagttttgaaactgatatgt 450  Q
    ||||| | |||||||||| ||||    
T  40077193 gagaattcttgaaactgaaatgt 40077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 24249915 - 24249759
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 258  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||||||||| | || |||| ||   |||||||||| |||||||||||||||||||||||||    
T  24249915 aaacatattcaaaatgtgctcatttgacaccattcaaaaccacattat-acttaaacatcaattacaacaactacattcatttatcaattcataaactac 24249817  T
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||    
T  24249816 acatgcaatcatcaaattgtcaattcctatatcaaccctaaccacatgcaaactactc 24249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 489265 - 489426
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  489265 tataaaacatatttaaattgtgttcatttgcaaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 489364  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||      | || ||||||||||||||||||||||    
T  489365 ctacacatgcaatgatgaaattgtcaattcatttgtaaaacctaaccacatgcaaactactc 489426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 43188279 - 43188166
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||     
T  43188279 aaaatgattgatacaacttacttgtgacaatatgcagttgatttgcttgcaattcttgaaaatgactttggtgaagattggagagaaattgagaatttta 43188180  T
Q  428 gagaagttttgaaa 441  Q
    ||||||||||||||    
T  43188179 gagaagttttgaaa 43188166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 448
Target Start/End: Original strand, 25864782 - 25864902
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||| |||     
T  25864782 aaaatgattaatacaacttacttgtgataatgtgtagttgatttgattgcaattcgtgaaaatgactttggtgaagattagagagaaattgagaattttt 25864881  T
Q  428 gagaagttttgaaactgatat 448  Q
    |||||||||||||| ||||||    
T  25864882 gagaagttttgaaaatgatat 25864902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 441
Target Start/End: Original strand, 39846832 - 39846945
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||| |||| ||| ||| ||||    
T  39846832 aaaatgattgatacaacttacttgtgataatgtgcaattggtttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgtgaattttg 39846931  T
Q  428 gagaagttttgaaa 441  Q
    ||||||||||||||    
T  39846932 gagaagttttgaaa 39846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 39846381 - 39846527
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    |||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  39846381 ttacaataaaatgtatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 39846480  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||             ||||||||||||||||||||||||||||||||||| |||||||    
T  39846481 atca-------------ctaaactaactaaaaaatcaatatacacttaaccaaactataa 39846527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 39601933 - 39601834
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||||| ||||    
T  39601933 aaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgaatttggcgaagattggagagaaattgagaattttg 39601834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 42485380 - 42485479
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  42485380 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 42485479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 5303621 - 5303762
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||| | |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||                  ||||||    
T  5303621 ttacaataacatttatgtccatcatttccataataacctaaacatctttcaataattaacatacacttaatcattt------------------gtgtcc 5303702  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5303703 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 5303762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 234 - 316
Target Start/End: Complemental strand, 37327161 - 37327080
Alignment:
Q  234 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  37327161 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaactactc 37327080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 41249916 - 41250026
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  41249916 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 41250015  T
Q  428 gagaagttttg 438  Q
     | ||||||||    
T  41250016 aacaagttttg 41250026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 45064471 - 45064377
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  45064471 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaa 45064377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 489471 - 489562
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttga 419  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||| |||||||||    
T  489471 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatcggagagaatttga 489562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 441
Target Start/End: Complemental strand, 35026786 - 35026604
Alignment:
Q  249 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaannnnnnnnaaaatgattgatacaacttac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||  | | || ||           ||||||||||| |||||||||    
T  35026786 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaacc-taaacaaattaacatta-tc--------attaaaatgattgacacaacttac 35026697  T
Q  349 ttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttggagaagttttgaaa 441  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| | |||| ||  ||| |||| ||| |||||||||    
T  35026696 ttgtgataatgtgtagttaatttgcttgcaattcgtgaaaatgaatttggtgaagattgtagagaaatttcgaattttgaagatgttttgaaa 35026604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 41249489 - 41249630
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||                  ||||||    
T  41249489 ttacaataaaatttatgtccatcatttccataataacctaaacatcactcattaattaacatacacttaatcattt------------------gtgtcc 41249570  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  41249571 atcataattctcgtaacctacactaactaaaaaatcaatatacacttaatcaaactataa 41249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 39939059 - 39939158
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||   ||||||||||||||| |||| ||||||| ||||    
T  39939059 aaaatgattgacacaacttacttgtgataatgtgcaattgatttgctttcaattcgtgaaaatggacttggtgaagattggagagaaattgagaattttg 39939158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 2984457 - 2984395
Alignment:
Q  257 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2984457 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 2984395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 15036571 - 15036665
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||||||| |||| |||||||    
T  15036571 aaaatgattgacacaacttatttgtgataatgtgcacttgatttgcttgcaattcgcgaaaatggatttggtgaagattggagagaaattgagaa 15036665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 39252239 - 39252153
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaa 414  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  39252239 aaaatgattgacacaacttacttgtgataacgcgcacttgatttgcttgcaattcgtgaaaatgaatttggtgaagattggagagaa 39252153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 43211736 - 43211624
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| | |||||| ||| |||    
T  43211736 aaaatgattgacacaacttacttgtggtaatgtgcagttgatttgcttgcaattcgtgaaagaaga-tttggtgaagattggagaaaatttgtgaa-ttt 43211639  T
Q  427 ggagaagttttgaaa 441  Q
     | ||||||||||||    
T  43211638 tgtgaagttttgaaa 43211624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 34822861 - 34822957
Alignment:
Q  328 aaaatgattgatacaactta--cttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||| |||| |||||||    
T  34822861 aaaatgattgatacaacttatacttgtgataatgtgcagttaatttgcttgcaattcgtgaaaaaagttttggtgaagattggagagaaattgagaa 34822957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 37327220 - 37327164
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  37327220 tataaaacatattcaaattgtgttcatttgccaccattcaaaatcacattatcattt 37327164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 22495272 - 22495216
Alignment:
Q  227 caactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaatt 283  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  22495272 caactacattcatttatcaattcgtaaactacacatgcaaccatcaaaatgtcaatt 22495216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 489112 - 489171
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  489112 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 42485012 - 42485071
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42485012 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 42485071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 35552098 - 35552051
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  35552098 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 35552051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 45128082 - 45128025
Alignment:
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||| | ||||||   | ||||||| ||||||||||||||||||||    
T  45128082 acatgcaatcatcaaaatttcaattcctacatcaaccataaccacatgcaaactactc 45128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 37327300 - 37327264
Alignment:
Q  103 ataattctcgtaacctaaactaactaaaaaatcaata 139  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  37327300 ataattctcataacctaaactaactaaataatcaata 37327264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 3e-83; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 55407423 - 55407587
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  55407423 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 55407522  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55407523 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 55407587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 51683639 - 51683475
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  51683639 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaa 51683540  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51683539 atacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 51683475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 48256207 - 48256371
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||    
T  48256207 tataaaacatattcaaattgttttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaattcataaa 48256306  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48256307 ctacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaactactctaa 48256371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 156 - 319
Target Start/End: Complemental strand, 50275170 - 50275007
Alignment:
Q  156 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||| |||||    
T  50275170 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctgatttaaacaacataggcaacaactacattcatttatcaattcctaaac 50275071  T
Q  256 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50275070 tacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaactactctaa 50275007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 21022524 - 21022685
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  21022524 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 21022623  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  21022624 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 21022685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 68028 - 67864
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  68028 tataaaacatattcaaattgtgttcatttgctaccattcaaagccacattatcatttaaacaacataggcaacaactacatttatttatcaattcataaa 67929  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  67928 ctacacatgcaatcattaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 67864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 50901917 - 50901753
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||    
T  50901917 tataaaacatattcaaattgtgttcatttaacaccattcaaagccacattatgaattaaacaacatagacaacaactacattcatttatcaattcctaaa 50901818  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50901817 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgtaaactactctaa 50901753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 37021719 - 37021883
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||| ||||    
T  37021719 tataaaagatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttatcaattcctaaa 37021818  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  37021819 ctacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatacaaactactctaa 37021883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 51683893 - 51683734
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  51683893 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 51683794  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51683793 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 51683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 50902170 - 50902011
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||     
T  50902170 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtct 50902071  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50902070 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 50902011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 40357916 - 40358080
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| |||||||||  ||||    
T  40357916 tataaaacatattcaaactgtgttcatttgccaccattcaaatccacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaa 40358015  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  40358016 ctacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactctaa 40358080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 48255953 - 48256112
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||    
T  48255953 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatctgtgtcc 48256052  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48256053 atcataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 48256112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 55407169 - 55407328
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| ||||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  55407169 ttacaataaaatttatgtcaataatttccacaataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 55407268  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  55407269 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaacgaaactataa 55407328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 21022270 - 21022430
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  21022270 ttacaataaaatttatgtccatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 21022369  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21022370 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 21022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 40357662 - 40357822
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  40357662 ttacaataaaatttatgtccatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 40357761  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  40357762 catcataattctcgtaacttaaactaactaaaaaatcaaaatacacttaaccaaactataa 40357822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 46436681 - 46436521
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||| |||| ||||  ||||||||| |||| ||||| ||||||||||    
T  46436681 tataaaacatattcaaattgtgttcatttgccaccattcagaaccacaatatcatttaaacagcataagcaacaactacattcgtttattaattcataaa 46436582  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  46436581 ctacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacgtgcaaactactc 46436521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 328 - 452
Target Start/End: Original strand, 48256415 - 48256539
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||       
T  48256415 aaaatgattgatacaatttacttgtgataatgtgcagttgatttgtttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtcat 48256514  T
Q  428 gagaagttttgaaactgatatgtgt 452  Q
    |||||||||||||||||||||||||    
T  48256515 gagaagttttgaaactgatatgtgt 48256539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 68211 - 68070
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| || ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  68211 ttacaataaaatttgtgtccatcatttccatcataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 68112  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatata 141  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  68111 atcataattctcataacctaaactaactaaataatcaatata 68070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 30726377 - 30726538
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||||    
T  30726377 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaa 30726476  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||| |||||| || ||||||||||||     || || |||||||| |||||||||||||    
T  30726477 ctacacgtgcaatgatgaaattgtcaattcatttataaaacctaaccaaatgcaaactactc 30726538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 1308750 - 1308911
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||  ||||| ||| |||||||||||||| ||||||    
T  1308750 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacatatgcaacatctacattcatttatcaatacataaa 1308849  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  1308850 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 1308911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 8109623 - 8109510
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||| |||     
T  8109623 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgaatttggtgaagattggagagaaattgagaacttta 8109524  T
Q  428 gagaagttttgaaa 441  Q
    ||||||||||||||    
T  8109523 gagaagttttgaaa 8109510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 37021463 - 37021601
Alignment:
Q  6 aataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata-tagttaataatttgtgtccatc 102  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||||||    
T  37021463 aataaaatttatgtccatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtccatc 37021562  T
Q  103 ataattctcgtaacctaaactaactaaaaaatcaatata 141  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  37021563 ataattctcgtaacctaaactaactaaaaaattaatata 37021601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 51683430 - 51683309
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  51683430 aaaatgattgatataacttacttgtgataatgtgtagttgatttgcttgcaattcgtgaaaatg-gtttggtgaagattggaaagaatttgagaagtttg 51683332  T
Q  428 gagaagttttgaaactgatatgt 450  Q
    ||||| | |||||||||| ||||    
T  51683331 gagaattcttgaaactgaaatgt 51683309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 1089220 - 1089381
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||  ||||| ||| |||||||||||||| ||||||    
T  1089220 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattattatttaaactacatatgcaacatctacattcatttatcaatacataaa 1089319  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||| |||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  1089320 ctacacttgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 1089381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 328 - 443
Target Start/End: Complemental strand, 67822 - 67707
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||| |||     
T  67822 aaaatgattgatacaacttacttgtgataatgtgcggttgattttcttgcaattcgtgaaaatgactttggtgaagatttgagagaaattgagaatttta 67723  T
Q  428 gagaagttttgaaact 443  Q
    ||||||||||||||||    
T  67722 gagaagttttgaaact 67707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 55407634 - 55407728
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  55407634 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggttttggtgaagattggagagaaattgagaa 55407728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 1308956 - 1309055
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  1308956 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 1309055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 50274964 - 50274854
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  50274964 aaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 50274865  T
Q  428 gagaagttttg 438  Q
     ||| ||||||    
T  50274864 aagatgttttg 50274854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 1089426 - 1089525
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  1089426 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 1089525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 30726583 - 30726682
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  30726583 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 30726682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 40358123 - 40358222
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  40358123 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 40358222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 14297572 - 14297401
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt----------atgattttaacaacatagacaacaactaaattcatttatc 244  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| |||||||          || |||| |||||||||| ||||||||| |||||||||||    
T  14297572 tataaaacatactcaaaatgtgttcatttggcaccattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatc 14297473  T
Q  245 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  14297472 aattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaactactc 14297401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 14315821 - 14315650
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt----------atgattttaacaacatagacaacaactaaattcatttatc 244  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| |||||||          || |||| |||||||||| ||||||||| |||||||||||    
T  14315821 tataaaacatactcaaaatgtgttcatttggcaccattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatc 14315722  T
Q  245 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  14315721 aattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaactactc 14315650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 21022731 - 21022825
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| || | |||||||    
T  21022731 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagcaattgagaa 21022825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 50275407 - 50275266
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||| || |||||||||||||||||||||                  ||||||    
T  50275407 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcattatttaacatacacttaatcattt------------------gtgtcc 50275326  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  50275325 atcataattctcgtaacctacactaactaaaaaatcaatatacatttaaccaaactataa 50275266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 11083646 - 11083813
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacatt----------atgattttaacaacatagacaacaactaaattcatttatcaatt 248  Q
    ||||||| ||||| |||||||||||| ||||||||||| |||||||          || |||| |||| ||||| ||||||||| ||||||||||||||     
T  11083646 aaacatactcaaaatgtgttcatttgacaccattcaaaaccacatttttattatacatcatttaaacagcataggcaacaactacattcatttatcaata 11083745  T
Q  249 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||||||||| |||||||||||||||     || |||||||||||||||||||||||||    
T  11083746 cataaactacacatgcaatgatcaaattgtcaattcattcataaaccctaaccacatgcaaactactc 11083813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 159 - 315
Target Start/End: Original strand, 21538092 - 21538258
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatcaatt 248  Q
    ||||| |||||||||||||||||||| || |||||||| ||||||||| |||          | |||||||||| ||||||||| |||||||||||||||    
T  21538092 aaacagattcaaattgtgttcatttggcatcattcaaaaccacattatcattaaacatcatttaaacaacataggcaacaactacattcatttatcaatt 21538191  T
Q  249 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 315  Q
    |||||||||| ||||||||  ||||||||||||||     || ||||||||||||||||||||||||    
T  21538192 cataaactacccatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactact 21538258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 21538304 - 21538397
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgaga 421  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||  || ||| |||||||||||    
T  21538304 aaaatgattgatgcaacttacttgtgataatgtgtggttgatttgcttgcaattcgtgaaaatggctttggtgagaatgggagagaatttgaga 21538397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 10753063 - 10753234
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatc 244  Q
    ||||||||||||| |||  |||| |||||||||||||||||| ||||||||| |||          | |||| ||||| ||||| ||| |||||||||||    
T  10753063 tataaaacatatttaaagagtgtccatttgccaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatc 10753162  T
Q  245 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||||||||||  ||||||||||||||     || |||||||||||||||||||||||||    
T  10753163 aattcataaactacacatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactactc 10753234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 10966832 - 10967003
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatc 244  Q
    ||||||||||||| |||  |||| |||||||||||||||||| ||||||||| |||          | |||| ||||| ||||| ||| |||||||||||    
T  10966832 tataaaacatatttaaagagtgtccatttgccaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatc 10966931  T
Q  245 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||||||||||  ||||||||||||||     || |||||||||||||||||||||||||    
T  10966932 aattcataaactacacatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactactc 10967003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 4720083 - 4720163
Alignment:
Q  234 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 314  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||||| | |  | |||||||||||||||||||||||    
T  4720083 attcatttaccaattcataaactacacacgcaatcatcaaaatgtcaattcttacgtaaaccctaaccacatgcaaactac 4720163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 37021933 - 37021991
Alignment:
Q  356 aatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaa 414  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  37021933 aatgtgcagttgatttgcttgctattcgtgaaaatgaatttggtgaagattggagagaa 37021991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 41798631 - 41798682
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  41798631 tataaaacatattcaaattgtgttcatttgctaccattcaaacccacattat 41798682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 50901711 - 50901620
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttga 419  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||  | |||||  ||||||||| |||  | |||||||||    
T  50901711 aaaatgattgatgcaacttacttgtgataatgtgcgattgatttgcttgcaattcacggaaatggatttggtgaaaatttaagagaatttga 50901620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 11050163 - 11050210
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  11050163 aaacatattcaaattgtgttcatttggcaccattcaaaaccacattat 11050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 1089067 - 1089126
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  1089067 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 1089126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 1308597 - 1308656
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  1308597 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 1308656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 11083873 - 11083921
Alignment:
Q  343 acttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  11083873 acttacttgtgataatgtggggatgattggcttgcaattcgtgaaaatg 11083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 30726224 - 30726275
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaacca 151  Q
    ||||||||||||  |||||||||||||||||||||||| ||| |||||||||    
T  30726224 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaacca 30726275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 46436460 - 46436412
Alignment:
Q  343 acttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  46436460 acttacttgtgataatgtggggatgattggcttgcaattcgtgaaaatg 46436412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9892908 - 9892955
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  9892908 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 9892955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 30704356 - 30704301
Alignment:
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 314  Q
    ||||||||||||| |||| ||||||  || ||||||||||||||| ||||||||||    
T  30704356 acatgcaatcatcgaattttcaattccaacatcaaccctaaccacgtgcaaactac 30704301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 50023183 - 50023230
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  50023183 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 50023230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 50030301 - 50030348
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  50030301 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 50030348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 41933363 - 41933420
Alignment:
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||| | ||||||   | |||||||||| |||||||||||||||||    
T  41933363 acatgcaatcatcaaaatatcaattcctacatcaaccctatccacatgcaaactactc 41933420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 41933480 - 41933528
Alignment:
Q  343 acttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatga 392  Q
    ||||||||||||||||||| || ||| |||||||||| ||||||||||||    
T  41933480 acttacttgtgataatgtggagatga-ttgcttgcaaatcgtgaaaatga 41933528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 49165472 - 49165419
Alignment:
Q  153 actataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||| ||||||| ||||| ||||||  |||||||||||||||| |||||||||    
T  49165472 actatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacattat 49165419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 14315590 - 14315542
Alignment:
Q  343 acttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    ||||||||| |||||||||  | ||||| ||||||||||||||||||||    
T  14315590 acttacttgggataatgtggggatgattggcttgcaattcgtgaaaatg 14315542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 46436761 - 46436725
Alignment:
Q  103 ataattctcgtaacctaaactaactaaaaaatcaata 139  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  46436761 ataattctcataacctaaactaactaaataatcaata 46436725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 3e-83; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 35258509 - 35258673
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  35258509 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactaaattcatttatcaattcataaa 35258608  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35258609 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 35258673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 45825313 - 45825149
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45825313 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 45825214  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45825213 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 45825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 47502752 - 47502588
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  47502752 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 47502653  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47502652 ttacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactactctaa 47502588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 156 - 319
Target Start/End: Original strand, 19527180 - 19527343
Alignment:
Q  156 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 255  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||     
T  19527180 ataaaacatattcaaattgtgtccatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaaa 19527279  T
Q  256 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19527280 tacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactactctaa 19527343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 51321151 - 51320988
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||    
T  51321151 tataaaacatattcaaattgtgttcatttgccactattcaaagtcacattatgatttaaacaatataggcaacaactacattcatttatcaattcataaa 51321052  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51321051 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 51320988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 23275739 - 23275904
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccacc-attcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataa 253  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  23275739 tataaaacatattcaaattgtgttcatttgtcacccattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataa 23275838  T
Q  254 actacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23275839 actacacatgcaatcatcaaattgtcaatttaaaaatcaaccctaaccacatgcaaactactctaa 23275904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 31783364 - 31783528
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||| |||||||||||| ||||    
T  31783364 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaagaacataggcaacaactacatttatttatcaattcctaaa 31783463  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31783464 ctacacatacaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 31783528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 45825568 - 45825409
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||    
T  45825568 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttttatacatttaatcatttgtgtcc 45825469  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  45825468 atcataattctcgtaacttaaactaactaaaaaatcaatatacacttaaccaaactataa 45825409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 52802568 - 52802404
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||| ||||||||||||||||  ||||||||||||||||  |||||||||| || |||||||||  ||||||||| |||||||||||||||| ||||    
T  52802568 tataaaagatattcaaattgtgttattttgccaccattcaaaatcacattatgacttaaacaacataagcaacaactacattcatttatcaattcttaaa 52802469  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52802468 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 52802404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 31783109 - 31783269
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  31783109 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 31783208  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31783209 aatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 31783269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 19526925 - 19527084
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||| || || ||||||||||||||||||||||| | ||||| ||||||||||    
T  19526925 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcattattttacatacacttaatcatttctatacacttaatcatttgtgtcc 19527024  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19527025 atcataattctcgtaacctacactaactaaaaaatcaatatacacttaaccaaactataa 19527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 19526738 - 19526886
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||||| ||||||||||    
T  19526738 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcattatttaacatacacttaatcatttctatacacttaatcatttgtgtcc 19526837  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 148  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19526838 atcataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19526886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 51321404 - 51321246
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||| ||||||||||    
T  51321404 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacgcttaatcatttttatacacttaatcatttgtgtcc 51321305  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  51321304 atcataattctcataacctaaactaacta-aaaatcaatatacacttaaccaaactataa 51321246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 23275951 - 23276073
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23275951 aaaatgattgatacaacttacttgtgataacgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 23276050  T
Q  428 gagaagttttgaaactgatatgt 450  Q
    ||||| | |||||||||| ||||    
T  23276051 gagaattcttgaaactgaaatgt 23276073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 328 - 456
Target Start/End: Original strand, 35258715 - 35258843
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  35258715 aaaatgattgatacaacttacttgtgataatgtgcagttgatatgcttgcaattcatgaaaatagctttggtgaagattggaaagaatttgagaagtttg 35258814  T
Q  428 gagaagttttgaaactgatatgtgtctgt 456  Q
    ||||||||||||||||||| ||| |||||    
T  35258815 gagaagttttgaaactgatgtgtttctgt 35258843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 35258289 - 35258414
Alignment:
Q  34 aacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaactaactaaaaaa 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  35258289 aacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtccatcataattctcataacctaaactaactaaaaaa 35258388  T
Q  134 tcaatatacacttaaccacactataa 159  Q
    ||||||||||||||| || |||||||    
T  35258389 tcaatatacacttaatcaaactataa 35258414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 19525416 - 19525564
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||||||||||    
T  19525416 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcattatttaacatacacttaatcatttatatacacttaatcatttgtgtcc 19525515  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 148  Q
    |  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19525516 aatataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19525564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 19526551 - 19526699
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||||||||||    
T  19526551 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcattatttaacatacacttaatcatttatatacacttaatcatttgtgtcc 19526650  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 148  Q
    |  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19526651 aatataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19526699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 19925179 - 19925018
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  19925179 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 19925080  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  19925079 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 19925018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 30890498 - 30890337
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  30890498 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 30890399  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  30890398 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 30890337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 52802823 - 52802663
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  ||| | |||||||||    
T  52802823 ttacaataaaatttatgtcaatcatttccataataacctaaacatcattcaataattaacacacacttaatcatttctatacaactaaatcatttgtgtc 52802724  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
     |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  52802723 tatcataattctcttaacctaaactaacaaaaaaatcaatatacacttaaccaaactataa 52802663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 19524568 - 19524716
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||||||||||    
T  19524568 ttacaataaaatttatgtccatcatttccataataacataaacatcattcattatttaacatacacttaatcatttatatacacttaatcatttgtgtcc 19524667  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 148  Q
    |  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19524668 aatataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19524716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 19524755 - 19524903
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||||||||||    
T  19524755 ttacaataaaatttatgtccatcatttccataataacataaacatcattcattatttaacatacacttaatcatttatatacacttaatcatttgtgtcc 19524854  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 148  Q
    |  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19524855 aatataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19524903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 49857579 - 49857740
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||| |||||||||||||  ||||||    
T  49857579 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctcatttaaacaacataggcaacaactacattcatttatcaaaacataaa 49857678  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||| ||||||     || || ||||||||||||||||||||||    
T  49857679 ctacacatgcaatgataaaattatcaattcatttataaaacctaaccacatgcaaactactc 49857740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 328 - 426
Target Start/End: Complemental strand, 11183408 - 11183310
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11183408 aaaataattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaattgctttggtgaagattggaaagaatttgagaagttt 11183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 29622105 - 29622224
Alignment:
Q  200 acattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaa 299  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  29622105 acattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaa 29622204  T
Q  300 ccacatgcaaactactctaa 319  Q
    |||||| |||||||||||||    
T  29622205 ccacatacaaactactctaa 29622224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 47502545 - 47502435
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||| ||| ||| ||||    
T  47502545 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgtttgcaattcgtaaaaatgattttggtgaagattggagagaaattgtgaattttg 47502446  T
Q  428 gagaagttttg 438  Q
    |||||||||||    
T  47502445 gagaagttttg 47502435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 23275504 - 23275644
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||||||    
T  23275504 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcattt------------------gtgtcc 23275585  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactata 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23275586 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactata 23275644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 11183549 - 11183454
Alignment:
Q  224 caacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11183549 caacaactacattaatttatcaattcataaactacacatgtaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactactctaa 11183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 228 - 319
Target Start/End: Complemental strand, 11196244 - 11196153
Alignment:
Q  228 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11196244 aactacattaatttatcaattcataaactacacatgcaatcatcaaaatgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 11196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 51320931 - 51320821
Alignment:
Q  341 caacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttggagaagttttgaa 440  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  51320931 caacttacttgtgataatgtgcagttgatttgcttccaattcgtgaaaatggttttggtgaagattggaaagaatttgag-agtgtggcgaagttttgaa 51320833  T
Q  441 actgatatgtgt 452  Q
    | ||||||||||    
T  51320832 attgatatgtgt 51320821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 52802360 - 52802249
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||| ||||||| |||     
T  52802360 aaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaataactttggtgacgattgg--agaaattgagaatttta 52802263  T
Q  428 gagaagttttgaaa 441  Q
    ||||||||||||||    
T  52802262 gagaagttttgaaa 52802249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 30890292 - 30890193
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  30890292 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 30890193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 430
Target Start/End: Complemental strand, 22524357 - 22524255
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||| ||||    
T  22524357 aaaatgattgacacaacttacttgtgataatttgcagttgatttgcttgcaattcgtgaaaatcgatttggtgaagattggagagaatttgagaattttg 22524258  T
Q  428 gag 430  Q
    |||    
T  22524257 gag 22524255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 328 - 432
Target Start/End: Complemental strand, 45825117 - 45825013
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||||     
T  45825117 aaaatgattgatacaacttacttgtgataatatgcgattgatttgctggcaattcgtgaaaatgattttggtgaagattggagagaaattgagaagttta 45825018  T
Q  428 gagaa 432  Q
    |||||    
T  45825017 gagaa 45825013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 29622267 - 29622366
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  29622267 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 29622366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 47502976 - 47502835
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||                  || |||    
T  47502976 ttacaataaaatttatgtccatcatttccataataacttaaacatcattcaataattaacatacacttaatcattt------------------gtctcc 47502895  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  47502894 atcataattcttgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 47502835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 19924987 - 19924888
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  19924987 aaaatgattgacacaacttacttgtgataatgcgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 19924888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 11196372 - 11196268
Alignment:
Q  2 ttacaataaaaattatgtccaat--ttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||| ||||||||||    
T  11196372 ttacaataaaatttatgtccattagttccataataacctaaacatcattcaataattaatatacacttaaacatttctatacacttaatcatttgtgtcc 11196273  T
Q  100 atcat 104  Q
    |||||    
T  11196272 atcat 11196268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 2425529 - 2425628
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||||||| | |||||| ||| |||    
T  2425529 aaaatgattgacacaacttacttgtgataatgcgcagttgatttgcttgcaattcgtgaaagaaga-tttggtgaagattggagaaaatttgtgaatttt 2425627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 19524942 - 19525039
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgt 97  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| | ||||| ||| ||||    
T  19524942 ttacaataaaatttatgtccatcatttccataataacataaacatcattcattatttaacatacacttaatcatttctatacacttaatcattggtgt 19525039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 19525603 - 19525700
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgt 97  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| | ||||| ||| ||||    
T  19525603 ttacaataaaatttatgtccatcatttccataataacataaacatcattcattatttaacatacacttaatcatttctatacacttaatcattggtgt 19525700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 19526077 - 19526174
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgt 97  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| | ||||| ||| ||||    
T  19526077 ttacaataaaatttatgtccatcatttccataataacataaacatcattcattatttaacatacacttaatcatttctatacacttaatcattggtgt 19526174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 22524461 - 22524399
Alignment:
Q  257 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  22524461 acacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaaccactctaa 22524399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 49857382 - 49857454
Alignment:
Q  5 caataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcattt 75  Q
    |||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49857382 caataaaatttatgtccaccatttccatcataacctaaacatcattcaataattaacatacacttaatcattt 49857454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 2425113 - 2425175
Alignment:
Q  257 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  2425113 acacatgcaatcatcaaattatcaattttaaaatcaactctaaccacatacaaactactctaa 2425175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 310
Target Start/End: Original strand, 17514336 - 17514497
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatg----------attttaacaacatagacaacaactaaattcatttatcaatt 248  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||           |||| |||| ||   |||||||||| |||||||||||||||    
T  17514336 aaacatattcaaattgtgttcatttggcaccattcaaaaccacattatacttatacatcatttaaacatcaattacaacaactatattcatttatcaatt 17514435  T
Q  249 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaa 310  Q
    ||||||||||||| | |||| ||||| ||||||||     || |||||||||||||||||||    
T  17514436 cataaactacacacgtaatcttcaaaatgtcaattcatttataaaccctaaccacatgcaaa 17514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 427
Target Start/End: Original strand, 31783587 - 31783658
Alignment:
Q  356 aatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||||| | |||| ||||||| ||||    
T  31783587 aatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattgaagagaaattgagaattttg 31783658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 19925332 - 19925273
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  19925332 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 19925273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 30890651 - 30890592
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  30890651 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 30890592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 38127223 - 38127278
Alignment:
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 314  Q
    |||||||||||||||||| ||||||  || ||||||||||||||| ||||||||||    
T  38127223 acatgcaatcatcaaattttcaattccaacatcaaccctaaccacgtgcaaactac 38127278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 25147676 - 25147571
Alignment:
Q  208 attttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgc 307  Q
    |||| ||||||||  ||| |||||| |||||| ||| |  ||||||||||||||||||||||||||| | ||||||   | |||||| ||||||| ||||    
T  25147676 atttaaacaacattcacatcaactacattcatctataacatcataaactacacatgcaatcatcaaagt-tcaattcctacatcaacactaaccagatgc 25147578  T
Q  308 aaactac 314  Q
    |||||||    
T  25147577 aaactac 25147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 2424590 - 2424641
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaa 51  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||||||||||    
T  2424590 ttacaataaaatttatatccatcatttccataataacctaaacatcattcaa 2424641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 2365669 - 2365622
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  2365669 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 2365622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 19156448 - 19156401
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  19156448 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 19156401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 22524922 - 22524871
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaa 51  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||| ||||||    
T  22524922 ttacaataaaatttatatccaccatttccataataacctaaacattattcaa 22524871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 512408 - 512571
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  512408 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaa 512507  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  512508 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 512571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 19228308 - 19228468
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  19228308 tataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 19228407  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19228408 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 19228468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 42537586 - 42537422
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  42537586 tataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 42537487  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  42537486 ctacacatgcaatcatcaaattgtcaattttaaaattaaccctaacaacatgcaaactactctaa 42537422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 38968535 - 38968370
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattca-aagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataa 253  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  38968535 tataaaacatattcaaattgtgttcatttgccaccattcataagtcacattatgattttaacaacataggcaacaactacattcatttatcaattcataa 38968436  T
Q  254 actacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38968435 actacacatgcaatcatcaaattgtcaattttaaaataaaccctaaccacatgcaaactactctaa 38968370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 7757761 - 7757597
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  7757761 tataaaacatgttcaaattgtgttcatttgccaccattcaaaaccacattataatttaaacaacataggcaacaactacattcatttatcaattcctaaa 7757662  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7757661 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 7757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 42942122 - 42942286
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||| ||||| ||||||||| |||||||||||||||| ||||    
T  42942122 tataaaacatattcaaattatgttcatttgccacaattcaaagccatattatgatttaaacagcataggcaacaactacattcatttatcaattcctaaa 42942221  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42942222 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 42942286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 14325 - 14489
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||| ||||    
T  14325 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatttatttatcaattcctaaa 14424  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  14425 ctacgcatgcaatcatcaaattttcaattttgaaatcaaccctaaccacatacaaactactctaa 14489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 8580141 - 8580305
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||| |||||||||  ||||    
T  8580141 tataaaacatattcaaattgtgttcatttgccaccattcaaagctacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaa 8580240  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  8580241 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 8580305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 328 - 456
Target Start/End: Complemental strand, 38968325 - 38968197
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38968325 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagcttg 38968226  T
Q  428 gagaagttttgaaactgatatgtgtctgt 456  Q
    ||||||||||||||||||| ||| |||||    
T  38968225 gagaagttttgaaactgatgtgtttctgt 38968197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 19228515 - 19228637
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19228515 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgattttggtgaagattggaaagaatttgagaagtttg 19228614  T
Q  428 gagaagttttgaaactgatatgt 450  Q
    ||||||||| |||||||||||||    
T  19228615 gagaagtttagaaactgatatgt 19228637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 8701860 - 8702021
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||| |||| |||||||||||||||||||||    
T  8701860 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaactactacattcatttatcaattcataaa 8701959  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||||||||||||||||     || || ||||||||||||||||||||||    
T  8701960 ctacacatgcaatcatcaaattgtcaattcatttataaaacctaaccacatgcaaactactc 8702021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 28877334 - 28877174
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  28877334 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 28877235  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28877234 catcataattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 28877174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 8701606 - 8701765
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  8701606 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 8701705  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||| || |||||||    
T  8701706 atcataattttcataacctaaactaactaaacaatcaatatacacttaatcaaactataa 8701765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 28877080 - 28876916
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||| ||| | |||||||||  ||||    
T  28877080 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaatataggcaacaactacatttaattatcaatttctaaa 28876981  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||    
T  28876980 ctacacatgcaatcatcaaattctcaattttgaattcaaccctaaccacatacaaactactctaa 28876916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 42537840 - 42537681
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||| |    
T  42537840 ttacaataagatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttatatacacttaatcatttgtgttc 42537741  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  42537740 atcataattctcgtaaccttaactaactaaaaaatcaatatacacttaaccaaactataa 42537681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 42941869 - 42942028
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  ||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||||||||    
T  42941869 ttacaataaaatttatgtccatcatttccacaataatctaaacatccttcaataattaacatacaattaatcatttctatacacttaatcatttgtgtcc 42941968  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42941969 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccagactataa 42942028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 7758016 - 7757856
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||| ||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  7758016 ttacaataaaatttatatccatcatttccataataatctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 7757917  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7757916 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 7757856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 17659013 - 17658854
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||| | |||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||    
T  17659013 ttacaataacatttatgtccatcatttccataataatctaaatatcattcaataattaacatacacttaatcatttttatacatttaatcatttgtgtcc 17658914  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  17658913 atcataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 17658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 38968789 - 38968630
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  38968789 ttacaataaaatttatgtccatcattttcataataacctaaacctcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 38968690  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  38968689 atcataattcccgtaacctaaactaaccaaaaaaacaatatacacttaaccaaactataa 38968630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 8579887 - 8580047
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| ||||||| |  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  8579887 ttacaataaaatttatgtctatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 8579986  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  8579987 catcgtaattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 8580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 512615 - 512737
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  512615 aaaatgattgatacaacttacttgtgataatgtacagttgatttgcttgcaattcatgaaaatggctttggtgaagattggaaagaatttgagaagtttg 512714  T
Q  428 gagaagttttgaaactgatatgt 450  Q
    ||||| | |||||||||| ||||    
T  512715 gagaattcttgaaactgaaatgt 512737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 17658759 - 17658598
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||  |||||    
T  17658759 tataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggccacaactacattcatttatcaataaataaa 17658660  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     ||||| ||||||||||| ||||||||||    
T  17658659 ctacacatgcaatgatgaaattgtcaattcatttatcaaacctaaccacatacaaactactc 17658598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 28241435 - 28241596
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  28241435 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 28241534  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  28241535 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 28241596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 40624550 - 40624720
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatc 244  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||          | |||| ||||| ||||||||| |||||||||||    
T  40624550 tataaaacatattcaaattgtgttcatttgtcaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacaactacattcatttatc 40624649  T
Q  245 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  40624650 aattcataaaatacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaactactc 40624720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 28241641 - 28241740
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  28241641 aaaatgattggtacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttgagaattttg 28241740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 20422315 - 20422215
Alignment:
Q  216 aacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 315  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||   | |||||||||||||||||||||||||||    
T  20422315 aacatagacaacaactacattcatttatcaattcatacactacacatccaatcatcaaattgtcaattcctacatcaaccctaaccacatgcaaactact 20422216  T
Q  316 c 316  Q
    |    
T  20422215 c 20422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 512214 - 512313
Alignment:
Q  60 atacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||| | ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  512214 atacacttaatcatttctatacacttaatcatttgtatccatcataattctcataacctaaactaactaaaaaatcaatatacacttaactaaactataa 512313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 7757554 - 7757455
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||| ||||||| ||||    
T  7757554 aaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatagatttggtgaagattggagagaaattgagaattttg 7757455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 42537373 - 42537250
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa--gtt 425  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||||||| |||||||   ||    
T  42537373 aaaatgattgatacaacttgcttgtgataatgtgcagttgatttgcttgcaattcgt-agaatggctttggtgcagattggaaagaaattgagaattttt 42537275  T
Q  426 tggagaagttttgaaactgatatgt 450  Q
    | ||||||||| |||||| ||||||    
T  42537274 tagagaagtttagaaactaatatgt 42537250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 14532 - 14631
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||||||||||| |||| ||||||| ||||    
T  14532 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttgttgaagattggagagaaattgagaattttg 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 8580348 - 8580442
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  8580348 aaaatgattgacacaacttacttgtgataatgtgcacttggtttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaa 8580442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 14177 - 14257
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata 80  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14177 ttacaataaaatttatgtccatcatttcgataataacctaaacatcattcaataattaacatacacttaatcatttctata 14257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 28876873 - 28876774
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||||  ||||| |||||||||| |||| ||||||| ||||    
T  28876873 aaaatgattgacacaacttacttgtgataatggccacttgatttgcttgcaattcgtgaaaatggatttggggaagattggagagaaattgagaattttg 28876774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 19228144 - 19228213
Alignment:
Q  90 atttgtgtccatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  19228144 atttgtgtctatcataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 19228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 19040753 - 19040804
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19040753 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattat 19040804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 381
Target Start/End: Original strand, 42942330 - 42942383
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaatt 381  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  42942330 aaaatgattgatgcaacttacttgtgataatgtgcggttgatttgcttgcaatt 42942383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 28241282 - 28241341
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  28241282 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 28241341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 40624781 - 40624829
Alignment:
Q  343 acttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  40624781 acttacttgtgataatgtggggatgattggcttgcaattcgtgaaaatg 40624829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 5197406 - 5197359
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  5197406 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 5197359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 27673293 - 27673340
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  27673293 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 27673340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 8702068 - 8702129
Alignment:
Q  330 aatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    ||||||| |||  |||||||||||||||||||  | |||||  |||||||||||||||||||    
T  8702068 aatgattaatagtacttacttgtgataatgtggggatgattaacttgcaattcgtgaaaatg 8702129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 7e-81; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 20917653 - 20917817
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20917653 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 20917752  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20917753 ctatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 20917817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 20926615 - 20926779
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20926615 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 20926714  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20926715 ctatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 20926779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 49196083 - 49196247
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  49196083 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 49196182  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49196183 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactctaa 49196247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 42756590 - 42756426
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  42756590 tataaaacatattcaaattgtgttcatttgccaccattcaaagcgacattatgatttaaacaacatagacaacaactacatccatttatcaattcataaa 42756491  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42756490 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 42756426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 50963391 - 50963227
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  50963391 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 50963292  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50963291 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 50963227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 4007959 - 4008123
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  4007959 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 4008058  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4008059 ctacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 4008123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 42165599 - 42165435
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  42165599 tataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 42165500  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42165499 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 42165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 48889180 - 48889016
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  48889180 tataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 48889081  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48889080 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 48889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 51807406 - 51807242
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||    
T  51807406 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaatttctaaa 51807307  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  51807306 ctacacatgcaatcatcaaattgtcaattttaaaatcaatcataaccacatgcaaactactctaa 51807242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 155 - 317
Target Start/End: Complemental strand, 44230150 - 44229988
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  44230150 tataaaacatattcaaattgtgttcatttgccaccgttcaaagccacattatgttttaaacaacataggcaacaactacattcatttatcaattcctaaa 44230051  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactct 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44230050 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactct 44229988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 30255638 - 30255802
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||| |||    
T  30255638 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttagcaattcacaaa 30255737  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30255738 ctaaacatgcaatcatcaaattgtcaactttaaaatcaaccctaaccacatgcaaactactctaa 30255802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 156 - 319
Target Start/End: Original strand, 50216515 - 50216678
Alignment:
Q  156 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 255  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||     
T  50216515 ataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaat 50216614  T
Q  256 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50216615 tacacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaactactctaa 50216678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 47073843 - 47074006
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||| ||||    
T  47073843 tataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaatataggcaacaactacattcatttatcaattcctaaa 47073942  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47073943 ctacacatgcattcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactcta 47074006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 3501528 - 3501692
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| |||||||||  ||||    
T  3501528 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaa 3501627  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  3501628 ctacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactctaa 3501692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 44230404 - 44230245
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  44230404 ttacaataaaatttatgtccataatttccgtaataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 44230305  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44230304 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 44230245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 328 - 452
Target Start/End: Complemental strand, 48888966 - 48888842
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48888966 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 48888867  T
Q  428 gagaagttttgaaactgatatgtgt 452  Q
    |||||||||||||||||||||||||    
T  48888866 gagaagttttgaaactgatatgtgt 48888842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 159 - 319
Target Start/End: Complemental strand, 597191 - 597031
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 258  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||||||    
T  597191 aaacataatcaaaatgtgttcttttgccaccattcaaagccacattatgatttaaacaacatgggcaacaactacattcatttatcaattcctaaactac 597092  T
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  597091 acatgcaatcatcaaattgtcaatatttaaatcaaccctaaccacatgcaaactactctaa 597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 3976143 - 3975979
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| ||  |||||  ||||    
T  3976143 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcaattgccaatttctaaa 3976044  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  3976043 ctacacatgcaatcatcaaattgtcaatttttaaatcaaccctaaccacatacaaactactctaa 3975979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 30255384 - 30255543
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  30255384 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 30255483  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  30255484 atcataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 30255543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 328 - 456
Target Start/End: Original strand, 30255845 - 30255973
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30255845 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttt 30255944  T
Q  428 gagaagttttgaaactgatatgtgtctgt 456  Q
    ||||||||||||||||||||||| |||||    
T  30255945 gagaagttttgaaactgatatgtttctgt 30255973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 3976398 - 3976238
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  3976398 ttacaataaaatttatgtccaccatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 3976299  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3976298 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 3976238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 42165854 - 42165694
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  42165854 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 42165755  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42165754 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 42165694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 48889425 - 48889266
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  48889425 ttacaataaaatttatgtccatcatttccataataacctaaactgcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 48889326  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48889325 atcataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 48889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 20917400 - 20917558
Alignment:
Q  5 caataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatc 102  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||    
T  20917400 caataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctgtacacttaatcatttgtgtccatc 20917499  T
Q  103 ataattctcgtaacctaaactaactaaaaaatcaatat--acacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  20917500 ataattctcgtaacctaaactaactaaaaaatcaatatacacacttaaccaaactataa 20917558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 20926362 - 20926520
Alignment:
Q  5 caataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatc 102  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||    
T  20926362 caataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctgtacacttaatcatttgtgtccatc 20926461  T
Q  103 ataattctcgtaacctaaactaactaaaaaatcaatat--acacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  20926462 ataattctcgtaacctaaactaactaaaaaatcaatatacacacttaaccaaactataa 20926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 42805898 - 42806054
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  42805898 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacattcatttatcaattcataaa 42805997  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||| ||||||        |||| |||||||||||||||||||||||||||| |||||||||||||    
T  42805998 ctatacatgc--------aattatcaattttaaaatcaaccctaaccacatacaaactactctaa 42806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 4007704 - 4007864
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata-tagttaataatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||    
T  4007704 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 4007803  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  4007804 catcataattcttgtaacctaaactaactaaaaaatcaatatacacttaatcaaactataa 4007864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 42756842 - 42756683
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||| ||||    
T  42756842 ttacaataaaatttatgtccatcattttcataataacctaaacatcattcaataattaacatacgcttaatcatttctatagacttaatcatttgcgtcc 42756743  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  42756742 atcataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 42756683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 42805643 - 42805803
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  42805643 ttacaataaaatttatgtccatcatttccatcataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 42805742  T
Q  100 atcataattctcgtaacctaaactaact-aaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| ||| || |||||||    
T  42805743 atcataattctcataacctaaactaactaaaaaaatcaatatacacctaatcaaactataa 42805803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 47073611 - 47073748
Alignment:
Q  23 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtccatcataattctcgtaacctaaa 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | ||||||||||||||||||||||||||||||||    
T  47073611 attttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtccatcataattctcgtaacctaaa 47073710  T
Q  122 ctaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||| |||||||    
T  47073711 ctaactaaaaaatcaatatacacttaaccaaactataa 47073748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 48563618 - 48563459
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| ||||| |||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||    
T  48563618 ttacaataaaatttatgcccatcattttcataataacataaacatcattcaataattaacatacacttaatcatttctatgcacttaatcatttgtgtcc 48563519  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  48563518 atcataattcttgtaatctaaactaactaaaaaatcaatatacacttaaccaaactataa 48563459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 42756383 - 42756261
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42756383 aaaatgattgatacaactgacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagttta 42756284  T
Q  428 gagaagttttgaaactgatatgt 450  Q
    ||||| | |||||||||| ||||    
T  42756283 gagaattcttgaaactgaaatgt 42756261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 50963649 - 50963486
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaata----attaacatacacttaatcatttctatatagttaa-taatttg 94  Q
    ||||||||||| ||||||| |  |||||||||||||||||||||||||||||||    |||||| |||||| ||||||||||||| |  ||| | |||||    
T  50963649 ttacaataaaatttatgtctatcatttccataataacctaaacatcattcaatatataattaacgtacactcaatcatttctatacaactaaatcatttg 50963550  T
Q  95 tgtccatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactata 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50963549 tgtccatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactata 50963486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 48563364 - 48563216
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||                |  ||||||||||||||| |    
T  48563364 tataaaacatattcaaattgtgttcatttgccaccattcaaagacacattatgatttaaacaac----------------tatatttatcaattcataga 48563281  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48563280 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactctaa 48563216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 48563172 - 48563050
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||||||||    
T  48563172 aaaatgattgatacaacttacttatgataatgtgcagttgatttgcttgcaatttgtgaaaatgattttgatgaagattgaaaagaatttgagaagtttg 48563073  T
Q  428 gagaagttttgaaactgatatgt 450  Q
     |||| | |||||||||| ||||    
T  48563072 aagaattcttgaaactgaaatgt 48563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 49268673 - 49268782
Alignment:
Q  23 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaac 122  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||    
T  49268673 atttccataataacctaaacatcatccaataattaacatacacataatcatttctatacacttaatcatttgcgtccatcataattctcgtaacctaaac 49268772  T
Q  123 taactaaaaa 132  Q
    ||||||||||    
T  49268773 taactaaaaa 49268782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 20917862 - 20917974
Alignment:
Q  331 atgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttggag 430  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||| |||    
T  20917862 atgattgatacaacttacttgtgataatgtgcgattgatttgcttgcaattcgtgaaaatggctttggtgaagattggagagaaattgagaattttagag 20917961  T
Q  431 aagttttgaaact 443  Q
    |||||||||||||    
T  20917962 aagttttgaaact 20917974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 20926824 - 20926936
Alignment:
Q  331 atgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttggag 430  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||| |||    
T  20926824 atgattgatacaacttacttgtgataatgtgcgattgatttgcttgcaattcgtgaaaatggctttggtgaagattggagagaaattgagaattttagag 20926923  T
Q  431 aagttttgaaact 443  Q
    |||||||||||||    
T  20926924 aagttttgaaact 20926936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 51807199 - 51807089
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||| ||| ||||    
T  51807199 aaaatgattgatacaacttacttgtgataatgtacagttgatttgcttgcaatttgtgaaaataactttggtgaagattggagagaaattgtgaattttg 51807100  T
Q  428 gagaagttttg 438  Q
    |||||||||||    
T  51807099 gagaagttttg 51807089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 49196294 - 49196384
Alignment:
Q  332 tgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||    
T  49196294 tgattgatacaacttacttgtgataatgtgcagttgattttcttgcaattcgtgaaaatgactttggtgaagattagagagaaattgagaa 49196384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 50216723 - 50216822
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  50216723 aaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 50216822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 3501737 - 3501831
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||| |||||||    
T  3501737 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattgaaaagaaattgagaa 3501831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 50963184 - 50963085
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  50963184 aaaatgattgacacaacttacttgtgataatgtacacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 50963085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 596989 - 596908
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattgga 409  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  596989 aaaatgattgacacaacttacttgtgataatgtgcaattgatttgcttgcaattcgtgaaaatggatttggtgaagattgga 596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 49195847 - 49195988
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||                  ||||||||||    
T  49195847 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataatttacatacacttaatc------------------atttgtgtcc 49195928  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  49195929 atcataattcttgtaagctaaactaactaaaaaatcaatatacaattaaccaaactataa 49195988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 54682038 - 54681977
Alignment:
Q  90 atttgtgtccatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaacca 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54682038 atttgtgtccatcataattctcgtaacctaaactaactaaaaaatcaatatacacttaacca 54681977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 44229945 - 44229877
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgacttt 396  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  44229945 aaaatgattgatacaacttacttgtgataatgtgcaattgatttgcttgcaattcgtgaaaatggcttt 44229877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 47074052 - 47074131
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattg 407  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||    
T  47074052 aaaatgattgacacaacttacttgtgataatgtgcggttgatttgcttgctattcgtgaaaatggatttggtgaagattg 47074131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 3975936 - 3975837
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||| | |||||| ||| |||    
T  3975936 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaagaaga-tttggtgaagattggagaaaatttgtgaatttt 3975838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 4008166 - 4008265
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | || |||||||||||||||| | |||||| ||| |||    
T  4008166 aaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgctattcgtgaaagaaga-tttggtgaagattggagaaaatttgtgaatttt 4008264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 42165393 - 42165294
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||| | |||||| ||| ||||    
T  42165393 aaaatgatggacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaagaatatttggtgaagattggagaaaatttgtgaattttg 42165294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 314
Target Start/End: Original strand, 31045234 - 31045388
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 258  Q
    ||||||||||| ||||||||  |||| ||||||||||| ||||||| | | || |||| ||   |||  ||||| |||| |||||||||| |||||||||    
T  31045234 aaacatattcacattgtgttattttgacaccattcaaaaccacatttt-acttaaacatcaattacattaactacattcgtttatcaatttataaactac 31045332  T
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 314  Q
    |||||||||||||||| ||||||||     || |||||||||||||||||||||||    
T  31045333 acatgcaatcatcaaaatgtcaattcattcataaaccctaaccacatgcaaactac 31045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 422
Target Start/End: Original strand, 42807498 - 42807568
Alignment:
Q  352 tgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||    
T  42807498 tgataatgtgcggttgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgagaa 42807568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 50216322 - 50216401
Alignment:
Q  3 tacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata 80  Q
    |||||||||| |||||||||  |||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  50216322 tacaataaaatttatgtccatcatttccataataacctaaacattattcatcatttaacatacacttaatcatttctata 50216401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 52391036 - 52391083
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||    
T  52391036 aaacatattcaaattgtgttattttgccaccattcaaaaccacattat 52391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 597592 - 597541
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaa 51  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||||||||||    
T  597592 ttacaataaaatttatatccatcatttccataataacctaaacatcattcaa 597541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 44227279 - 44227231
Alignment:
Q  393 ctttggtgaagattggaaagaatttgagaagtttggagaagttttgaaa 441  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||||||||||    
T  44227279 ctttggtgaagattggagagaaattgagaattttagagaagttttgaaa 44227231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16611510 - 16611463
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  16611510 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 16611463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 22047743 - 22047790
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  22047743 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 22047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 36127869 - 36127822
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  36127869 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 36127822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 41612800 - 41612753
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  41612800 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 41612753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 2647891 - 2647828
Alignment:
Q  364 gttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||| | || ||||| |||||||||| |||| ||||||| ||||    
T  2647891 gttgatttgcttgcaattcgtgaaagaaga-tttggcgaagattggagagaaattgagaattttg 2647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 2e-78; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 39460965 - 39460801
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||    
T  39460965 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaaaataggcaacaactacattcatttatcaattcataaa 39460866  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39460865 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 39460801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 10517417 - 10517253
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  10517417 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 10517318  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10517317 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 10517253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 47776771 - 47776607
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  47776771 tataaaacatattcaaattgtgttcatttgtcaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 47776672  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47776671 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 47776607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 156 - 319
Target Start/End: Complemental strand, 34738802 - 34738639
Alignment:
Q  156 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||| |||||    
T  34738802 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacattcatttatcaattcctaaac 34738703  T
Q  256 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34738702 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 34738639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 17835513 - 17835349
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  17835513 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 17835414  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  17835413 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatacaaactactctaa 17835349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 36978035 - 36977874
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  36978035 tataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 36977936  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36977935 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 36977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 9494431 - 9494595
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  9494431 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 9494530  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
     ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9494531 ttacacatgcaaccatcaaattttcaattttaaaatcaacccaaaccacatgcaaactactctaa 9494595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 27453255 - 27453419
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||| ||||    
T  27453255 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacattcatttatcaattcctaaa 27453354  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27453355 ctacacatgcaatcatcaaattgtcaattttgaaatcaactctaaccacatgcaaactactctaa 27453419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 47672721 - 47672881
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |    
T  47672721 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataga 47672820  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 315  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47672821 ttatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 47672881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 37340741 - 37340581
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||| ||||||||||||    
T  37340741 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaagtacattcatttttcaattcataaa 37340642  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 315  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  37340641 ctacacatgaaatcatcaaattgtcaattttaaaatcaatcctaaccacatccaaactact 37340581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 47777025 - 47776866
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |    
T  47777025 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgttc 47776926  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47776925 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccagactataa 47776866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 9494178 - 9494337
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  9494178 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 9494277  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  9494278 atcataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 9494337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 27453024 - 27453160
Alignment:
Q  23 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaac 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  27453024 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtccatcataattctcgtaacctaaac 27453123  T
Q  123 taactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27453124 taactaaaaaatcaatatacacttaaccaaactataa 27453160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 36978289 - 36978130
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| || |||||||    
T  36978289 ttacaataaaaattatgtccatcatttccataataacctaaacatcattcaataattaatatacacttaatcatttctatacacttaatcatctgtgtcc 36978190  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  36978189 atcataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 36978130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 328 - 452
Target Start/End: Complemental strand, 37340534 - 37340410
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37340534 aaaatgattgatacaacttacttgtgataatgtgctgttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaagtttg 37340435  T
Q  428 gagaagttttgaaactgatatgtgt 452  Q
    |||||||||||||||||||||||||    
T  37340434 gagaagttttgaaactgatatgtgt 37340410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 328 - 456
Target Start/End: Original strand, 9494649 - 9494777
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  9494649 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttggaattcgtgaaaatggctttggtgaagattgaaaagaatttgagaagtttg 9494748  T
Q  428 gagaagttttgaaactgatatgtgtctgt 456  Q
    ||||||||||||||||||||||| |||||    
T  9494749 gagaagttttgaaactgatatgtttctgt 9494777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 37340995 - 37340836
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||    
T  37340995 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctacacacttaatcatttgtgtcc 37340896  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| ||||||||||||||||| |||| ||||||| |||||||| |||||||    
T  37340895 atcataattctcataacctaaactaactaacaaattaatatactcttaaccaaactataa 37340836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 15073864 - 15074025
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||||    
T  15073864 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaa 15073963  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  15073964 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 15074025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 17835768 - 17835608
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| |  ||| | |||||||||    
T  17835768 ttacaataaaatttatgtccatcatttccataataacctaaatattattcaataaataacatacacttaatcatttctatacaactaaatcatttgtgtc 17835669  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17835668 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 17835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 34739057 - 34738898
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||||| ||||||||||    
T  34739057 ttacaataaaatttatgtccatcattttcataataacctaaacatcattcattatttaacatacacttaatcatttctatacacttaatcatttgtgtcc 34738958  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| || |||||||    
T  34738957 atcataattctcgtaacttacactaactaaaaaatcaatatacacttaatcaaactataa 34738898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 42507663 - 42507821
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||||    
T  42507663 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaa 42507762  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaacta 313  Q
    ||||||||||||| || ||||||| ||||     || || |||||||||||||||||||    
T  42507763 ctacacatgcaatgatgaaattgttaattcatttataaaacctaaccacatgcaaacta 42507821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 47672506 - 47672626
Alignment:
Q  39 aaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaactaactaaaaaatcaat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47672506 aaacatcattcaataattaacatacacttaatcatttctatatacttaatcatttgtgtccatcataattctcataacctaaactaactagaaaatcaat 47672605  T
Q  139 atacacttaaccacactataa 159  Q
    |||||||||| || |||||||    
T  47672606 atacacttaatcaaactataa 47672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 39460758 - 39460645
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| ||||||| |||     
T  39460758 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaacattagagagaaattgagaatttta 39460659  T
Q  428 gagaagttttgaaa 441  Q
    ||||||||||||||    
T  39460658 gagaagttttgaaa 39460645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 36977826 - 36977733
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgaga 421  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36977826 aaaatgattgatacaacttacttgtgataatgtacagttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgaga 36977733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 14689694 - 14689822
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||    
T  14689694 tataaaagatattcaaattgtgtttatttgccactattcaaagctacattatcatttaaacaacatagacaacaactacattcatttatcaataaataaa 14689793  T
Q  255 ctacacatgcaatcatcaaattgtcaatt 283  Q
    ||||||||||||| || ||||||||||||    
T  14689794 ctacacatgcaatgatgaaattgtcaatt 14689822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 47776563 - 47776453
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | | ||| ||||    
T  47776563 aaaatgattgatacaccttacttgtgataatgtgcagttgatttgcttgcaatttgtgaaaatgactttggtgaagattggagagaaatggtgaattttg 47776464  T
Q  428 gagaagttttg 438  Q
    |||||||||||    
T  47776463 gagaagttttg 47776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 14689447 - 14689591
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||| | |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  14689447 ttacaataacatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacacttaatcatttgtgtcc 14689546  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaacca 151  Q
    || |       | |||| ||||||||||||| ||||||||||||||||||||    
T  14689547 atta-------cataacataaactaactaaataatcaatatacacttaacca 14689591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 27453462 - 27453572
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||| ||| ||||    
T  27453462 aaaatgattgatacaacttacttgtgataatgtgcaattgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgtgaattttg 27453561  T
Q  428 gagaagttttg 438  Q
     ||||||||||    
T  27453562 aagaagttttg 27453572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 15074070 - 15074169
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  15074070 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttacaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 15074169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 17835306 - 17835208
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  17835306 aaaatgattga-acaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 17835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 34738594 - 34738484
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||| |||| ||| ||| ||||    
T  34738594 aaaatgattgacacaacttacttgtgataatgtgcagatgatttgcttgcaattcgtgaaaatagatttggtgaagattggagagaaattgtgaattttg 34738495  T
Q  428 gagaagttttg 438  Q
     ||| ||||||    
T  34738494 aagatgttttg 34738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 47672928 - 47673004
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaaga 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  47672928 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatagctttgatgaaga 47673004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 42507869 - 42507968
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  42507869 aaaatgtttgacacaagttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 42507968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 39461178 - 39461060
Alignment:
Q  23 atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtccatcataattctcgtaacctaaac 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||                  ||||||||||||||||| |||||||||||    
T  39461178 atttccataataacctaaatatcattcaataattaacatacacttaatcattt------------------gtgtccatcataattcttgtaacctaaac 39461097  T
Q  123 taactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  39461096 taactaaaacatcaatatacacttaaccaaactataa 39461060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 426
Target Start/End: Complemental strand, 10517211 - 10517113
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| | |||||| |||||||    
T  10517211 aaaatgattgacacagcttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaagaaga-tttggtgaagattggagaaaatttgtgaagttt 10517113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 316
Target Start/End: Original strand, 17741162 - 17741255
Alignment:
Q  223 acaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||     || |||||||||||||||||||||||||    
T  17741162 acaacaactacattcatttatcaattcataaactacacatgcaatcttcaaaatgtcaattcattcataaaccctaaccacatgcaaactactc 17741255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 15073711 - 15073770
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  15073711 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 15073770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 42507510 - 42507569
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42507510 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 42507569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 17741088 - 17741135
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  17741088 aaacatattcaaattgtgttcatatggcaccattcaaaaccacattat 17741135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 41734496 - 41734441
Alignment:
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 314  Q
    |||||||||||||||||| ||||||  || ||||||||||||||| ||||||||||    
T  41734496 acatgcaatcatcaaattttcaattccaacatcaaccctaaccacgtgcaaactac 41734441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 10517549 - 10517512
Alignment:
Q  122 ctaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10517549 ctaactaaaaaatcaatatacacttaaccaaactataa 10517512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 556286 - 556333
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| | |||||||||||||||||||||| |||||||||    
T  556286 aaacatactcaaaatatgttcatttgccaccattcaaaaccacattat 556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 17741315 - 17741373
Alignment:
Q  343 acttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtga 401  Q
    |||||||| ||||||||||  | ||||| ||||| |||||||||||||| |||||||||    
T  17741315 acttacttttgataatgtggggatgattggcttgtaattcgtgaaaatggctttggtga 17741373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 9e-74; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 21998627 - 21998463
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||  ||||    
T  21998627 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaaataaattcaattatcaattactaaa 21998528  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21998527 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 21998463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 7185466 - 7185303
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  7185466 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 7185367  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7185366 caacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactcta 7185303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 25965257 - 25965094
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||| ||||    
T  25965257 tataaaacatattcaaattgtgttcatttgccaacattcaaagccacattatgatttaaacaacataggaaacaactacattcatttatcaattcctaaa 25965158  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25965157 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta 25965094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 39948037 - 39947873
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39948037 tataaaacatattcaaattgtgttcttttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39947938  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  39947937 ctacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 39947873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 28469078 - 28468914
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||| |||||||||  ||||    
T  28469078 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaattacattcaattatcaatttctaaa 28468979  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28468978 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 28468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 32955990 - 32956154
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || |||||||||||||||| ||||    
T  32955990 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaacaacataggcaacaagtacattcatttatcaattcctaaa 32956089  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  32956090 ctacacatgcaatcatcaaattgtcaattttaaaatcaacccaaaccacatacaaactactctaa 32956154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 17421004 - 17420840
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| | |||||||  ||||    
T  17421004 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaacaactacattcaatgatcaatttctaaa 17420905  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  17420904 ctacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatgcaaactactctaa 17420840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 45136685 - 45136844
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaataatttgtgtcc 99  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||    
T  45136685 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttatatacacttaatcatttgtgtcc 45136784  T
Q  100 atcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  45136785 atcataattctcgtaacctaaactaactaaaaaatcaatatacatttaaccaaactataa 45136844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 45429028 - 45428864
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||||| |||||||||  ||||    
T  45429028 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacgtaggcaacaactacattcaattatcaatttctaaa 45428929  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  45428928 ctacacatgcaatcatcaaattgtcattttttaaatcaaccctaaccacatacaaactactctaa 45428864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 45429282 - 45429122
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  45429282 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 45429183  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45429182 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 45429122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 39948292 - 39948132
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  39948292 ttacaataaaatttatatccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 39948193  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39948192 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 39948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 28469332 - 28469172
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| | |||||||||    
T  28469332 ttacaataaaatttatgtccatcattttcataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 28469233  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28469232 catcataattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 28469172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 32955740 - 32955888
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata-tagttaataatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||    
T  32955740 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 32955839  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacactta 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32955840 catcataattctcgtaacctaaactaactaaaaaatcaatatacactta 32955888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 22687070 - 22686910
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctatatagttaa-taatttgtgtc 98  Q
    ||||||||||| ||||||| |  |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |  ||| |||||||||||    
T  22687070 ttacaataaaatttatgtctatcattttcataataacctaaacatcattcaataatcaacatacacttaatcatttctatacaactaaataatttgtgtc 22686971  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  22686970 catcataattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 22686910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 45137103 - 45137232
Alignment:
Q  190 attcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaa 289  Q
    |||||| ||||||||||||||| || ||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45137103 attcaaggccacattatgatttaaataacataggcaagaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaa 45137202  T
Q  290 tcaaccctaaccacatgcaaactactctaa 319  Q
    |||||| |||||||||||||||||||||||    
T  45137203 tcaaccttaaccacatgcaaactactctaa 45137232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 441
Target Start/End: Complemental strand, 25965042 - 25964929
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||     
T  25965042 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggctttggtgaagattggagagaaattgagaattttt 25964943  T
Q  428 gagaagttttgaaa 441  Q
     |||||||||||||    
T  25964942 tagaagttttgaaa 25964929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 45137275 - 45137385
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||| ||| ||||    
T  45137275 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgtgaattttg 45137374  T
Q  428 gagaagttttg 438  Q
    ||||| |||||    
T  45137375 gagaaattttg 45137385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 329 - 430
Target Start/End: Complemental strand, 28468870 - 28468769
Alignment:
Q  329 aaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttgg 428  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| |||||    
T  28468870 aaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttgg 28468771  T
Q  429 ag 430  Q
    ||    
T  28468770 ag 28468769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 42505604 - 42505695
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttga 419  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  42505604 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaatttga 42505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 21998420 - 21998326
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  21998420 aaaatgattgacacaacttacttgtgataatgtacaattgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaa 21998326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 7185258 - 7185159
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  7185258 aaaattattgacacaacttacttgtgataatgcgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 7185159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 45428820 - 45428742
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagatt 406  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  45428820 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggagaagatt 45428742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 39947829 - 39947748
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattgga 409  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | || ||||||||||||||||    
T  39947829 aaaatgattgacacaacttacttgtgataatgtgccgttgatttgcttgcaattcgtgaaagaaga-tttggtgaagattgga 39947748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 31367398 - 31367308
Alignment:
Q  223 acaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaacta 313  Q
    ||||||| ||||||||||||| ||||||||||||| | |||||||||||||| | ||||||   | |||||||||||||||||||||||||    
T  31367398 acaacaaataaattcatttataaattcataaactatatatgcaatcatcaaaatatcaattcctacatcaaccctaaccacatgcaaacta 31367308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 32956198 - 32956261
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatg 391  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  32956198 aaaatgattggcacaacttacttgtgataatgtgcagttgatttgcttgctatttgtgaaaatg 32956261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 35464313 - 35464398
Alignment:
Q  228 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaacta 313  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||   | || || |||||||||||||||||||    
T  35464313 aactacattcatttataaattcataaactacacatgcaatcatcagaatgtcaattcatacataaatcctaaccacatgcaaacta 35464398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 17421157 - 17421098
Alignment:
Q  102 cataattctcgt--aacctaaactaactaaaaaatcaatatacacttaaccacactataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  17421157 cataattctcgtgtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 17421098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 25515549 - 25515606
Alignment:
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||||| | ||||||   | ||||||||||||||||||||||||||||    
T  25515549 acatgcaatcatcaaaatttcaattcctacatcaaccctaaccacatgcaaactactc 25515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 17420797 - 17420757
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttga 368  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  17420797 aaaatgattgacacaacttacttgtgataatgtgcacttga 17420757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 20938329 - 20938282
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  20938329 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 20938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 29401244 - 29401291
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 206  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  29401244 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 29401291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 7855 - 7691
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  7855 tataaaacatattcaaattgtgttcatttgccatcattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 7756  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  7755 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 7691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 8039 - 7899
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata-tagttaataatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||    
T  8039 ttacaataaaatttatgtccatcatttcgataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 7940  T
Q  99 catcataattctcgtaacctaaactaactaaaaaatcaata 139  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  7939 cataataattctcgtaacctaaactaactaaaaaatcaata 7899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 7648 - 7554
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaa 422  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  7648 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaa 7554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 15259 - 15423
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||  ||||    
T  15259 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattcatttatcaatttctaaa 15358  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15359 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa 15423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 15003 - 15164
Alignment:
Q  2 ttacaataaaaattatgtcca--atttccataataacctaaacatcattcaataattaacatacacttaatcatttctata-tagttaataatttgtgtc 98  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||    
T  15003 ttacaataaaatttatgtccatcatttccataataacctaaacatcattcaataattaacatacacttaatcatttctatacaactaaatcatttgtgtc 15102  T
Q  99 catcataattctcgtaacctaaactaa-ctaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||||||||| |||||||    
T  15103 catcataattcttgtaacctaaactaaccaaaaaaatcaatatacacttaaccaaactataa 15164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 15465 - 15564
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa-atgactttggtgaagattggaaagaatttgagaagttt 426  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| | |||||| ||| |||    
T  15465 aaaatgattgacacaacttacttatgataatgtgcagttgatttgcttgcaattcgtgaaagaaga-tttggtgaagattggagaaaatttgtgaatttt 15563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 364 - 528
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| |||||||||  ||||    
T  364 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcaattatcaatttctaaa 463  T
Q  255 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  464 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 565 - 643
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagatt 406  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  565 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggagaagatt 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 233 - 270
Alignment:
Q  122 ctaactaaaaaatcaatatacacttaaccacactataa 159  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  233 ctaactaaaaaatcaaaatacacttaaccaaactataa 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 95; Significance: 3e-46; HSPs: 5)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 8582 - 8476
Alignment:
Q  213 aacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 312  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8582 aacaacataggcaacaactacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 8483  T
Q  313 actctaa 319  Q
    |||||||    
T  8482 actctaa 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 8434 - 8311
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaattt--gagaagtt 425  Q
    ||||| |||||| |||||||||||||||||||||  |||||||||||||||||||| ||||| | |||||||||  |||||| ||| |||  ||||||||    
T  8434 aaaataattgatgcaacttacttgtgataatgtgtggttgatttgcttgcaattcgcgaaaacggctttggtgagaattggagagagtttgagagaagtt 8335  T
Q  426 tggagaagttttgaaactgatatg 449  Q
     |||||||||| ||||||||||||    
T  8334 gggagaagtttagaaactgatatg 8311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 10890 - 10833
Alignment:
Q  84 ttaataatttgtgtccatcataattctcgtaacctaaactaactaaaaaatcaatata 141  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  10890 ttaattatttgtgtccatcataattctcataacctaaactaactaaataatcaatata 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10930 - 10881
Alignment:
Q  26 tccataataacctaaacatcattcaataattaacatacacttaatcattt 75  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  10930 tccatcataatctaaacatcattcaataattaacatacacttaattattt 10881  T

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Target: scaffold0155; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 10791 - 10761
Alignment:
Q  155 tataaaacatattcaaattgtgttcatttgc 185  Q
    |||||||||||||||||||||||||||||||    
T  10791 tataaaacatattcaaattgtgttcatttgc 10761  T

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Target: scaffold0101 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 40877 - 40976
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  40877 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgagaattttg 40976  T

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Target: scaffold0101; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 40750 - 40832
Alignment:
Q  234 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 316  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  40750 attcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 40832  T

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Target: scaffold0184 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 18138 - 18237
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  18138 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 18237  T

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Target: scaffold0078 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 54706 - 54607
Alignment:
Q  328 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgactttggtgaagattggaaagaatttgagaagtttg 427  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||| ||| ||| ||||    
T  54706 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagagaaattgtgaattttg 54607  T

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Target: scaffold0007 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 314
Target Start/End: Original strand, 251116 - 251270
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 258  Q
    ||||||||||  |||||||| ||||| ||||||||||| ||||||| |  ||  |||| ||   ||| |||||| |||||||||||||||||||||||||    
T  251116 aaacatattcttattgtgttaatttgacaccattcaaaaccacattcttctta-aacatcaattacatcaactacattcatttatcaattcataaactac 251214  T
Q  259 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 314  Q
    ||||||||| |||||| || |||||   |  | ||||||||||| |||||||||||    
T  251215 acatgcaattatcaaaatgccaattcatacgtaaaccctaaccatatgcaaactac 251270  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 18573 - 18619
Alignment:
Q  159 aaacatattcaaattgtgttcatttgccaccattcaaagccacatta 205  Q
    ||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  18573 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacatta 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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