View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21392_high_30 (Length: 304)
Name: NF21392_high_30
Description: NF21392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21392_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 23 - 279
Target Start/End: Complemental strand, 7934753 - 7934497
Alignment:
| Q |
23 |
atcatcataggtagtcactaaatggtatcttatgaccaattattattttttaatctaaaatctgaatcttatcgagaaacaaagaactcgtctatggcac |
122 |
Q |
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| T |
7934753 |
atcatcctaggtagtcactaaatggtatcttatgaccaattattattttttaatctaaaatctgaatcttatcgagaaacaaagaactcgtctatggcac |
7934654 |
T |
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| Q |
123 |
atattgtaacaatgagaaacaaagaactcgtctatggcacatattgtaacaatggaatgaaagaataacgaacaaaatattatgtatttttcatgagaaa |
222 |
Q |
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| T |
7934653 |
atattgtaacaatgagaaacaaagaactcgtctatggcacatattgtaacaatggaatgaaagaataatgaacaaaatattatgtatttttcatgagaaa |
7934554 |
T |
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| Q |
223 |
tattacataatacacaggaaaaaatggaacaggggttaccaaatgtggtgctgatga |
279 |
Q |
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| T |
7934553 |
tattacataatacacaggaaaaaatggaacaggggttaccaaatgtggtgctgatga |
7934497 |
T |
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