View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21392_high_6 (Length: 365)
Name: NF21392_high_6
Description: NF21392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21392_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 44541772 - 44542094
Alignment:
| Q |
3 |
aacattaagagattcctgtaagccacgggtcagcagaactaggagcattagcaatcctaacatcagcatgggcataacccatgatgtcaatattgatggt |
102 |
Q |
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| T |
44541772 |
aacattaagagattcctgtaagccacgggtcagcagaactaggagcattagcaatcctaacatcagcatgggcataacccaggatgtcaatattgatggt |
44541871 |
T |
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| Q |
103 |
tgttccttttgcagcatagtgaaattcactgtttcgttcaaaattgcttctttttgtactgcatcttcatttccaacatagcgtgaaccatcgtttgcat |
202 |
Q |
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| T |
44541872 |
tgttccttttgcagcatagtgaaattcgctgtttcgttcaaaattgcttctttttgtactgcatcttcatttccaacatagcgtgaaccatcgtttgcat |
44541971 |
T |
|
| Q |
203 |
ataagtcactgcaaacattgctttcacagtaatatttcttgaattcttgttctatcagcccttccttgtgatcaagggaggtagtctcagttgcttttga |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
44541972 |
ataagtcactgcaaacattgctttcacagtaatatttcttgaattcttgttctatcagcccttccttgtcatcaagggaggtagtctcagttgcttttga |
44542071 |
T |
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| Q |
303 |
ggtatcttcgtcagtgtatgtga |
325 |
Q |
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|||||||||||| |||||||||| |
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| T |
44542072 |
ggtatcttcgtcggtgtatgtga |
44542094 |
T |
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