View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21392_high_8 (Length: 355)
Name: NF21392_high_8
Description: NF21392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21392_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 37514631 - 37514445
Alignment:
| Q |
1 |
cgtgatcctgctcacttctcttactcttaacccacgcgccattattttcctttgactcatatttactgtctacaatatcaattattacatttcgcacccc |
100 |
Q |
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| T |
37514631 |
cgtgatcctgctcacttctcttactcttaacccacgcgccattattttcctttgactcatatttactgtctacaatatcaattattacatttcacacccc |
37514532 |
T |
|
| Q |
101 |
cactctctccattcctgaacaaccttcttctctcactcccagatcttcttccaaaccaacttggtactacttcactcatctttcacc |
187 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37514531 |
cattctctccattcctgaacaaccttcttctctcactcccagatcttcttccaaaccaacttggtactacttcactcatctttcacc |
37514445 |
T |
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