View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21393_high_10 (Length: 271)
Name: NF21393_high_10
Description: NF21393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21393_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 29 - 255
Target Start/End: Complemental strand, 37216477 - 37216251
Alignment:
| Q |
29 |
caacattcaatctttgcacggtgaaagtatttgtcaatttgcaaaaaccaataacagtcttatccttacaattttgaggatcaatttgcctatttgctgg |
128 |
Q |
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| T |
37216477 |
caacattcaatctttgcacggtgaaagtatttgtcaatttgcaaaaaccaataacagtcttatccttacaattttgaggatcaatttgcctatttgctgg |
37216378 |
T |
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| Q |
129 |
tttgtacaaattacttgaactcttccctttacaaatctttgaaaacataatggaaaacagtaacatttttgcaatcaaaagtaaaaacagaaaacgtttt |
228 |
Q |
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| T |
37216377 |
tttgtacaaattacttgaactcttccctttacaaatctttgaaaacataatggaaaacagtaacatttttgcaatcaaaagtaaaaacagaaaacgtttt |
37216278 |
T |
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| Q |
229 |
ctaaatccagacagaccaataaaaaat |
255 |
Q |
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||||||||||||||||||||||||||| |
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| T |
37216277 |
ctaaatccagacagaccaataaaaaat |
37216251 |
T |
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