View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21394_high_2 (Length: 614)
Name: NF21394_high_2
Description: NF21394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21394_high_2 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 547; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 1 - 606
Target Start/End: Complemental strand, 21030946 - 21030340
Alignment:
| Q |
1 |
caaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
21030946 |
caaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccactaatagtgtt |
21030847 |
T |
 |
| Q |
101 |
acagttgaatctggaaatgttagtaacactgagcatgggaat-ggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtgaacttgctt |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21030846 |
acagttgaatctggaaatgttagtaacactgagcatgggaataggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtaaacttgctt |
21030747 |
T |
 |
| Q |
200 |
caacaagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcttattgttccttatcagtcag |
299 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21030746 |
caacaagcaactctgttatcctcagctgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcctattgttccttatcagtcag |
21030647 |
T |
 |
| Q |
300 |
gtatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctca |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
21030646 |
gtatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtatgtttttcaaaatctca |
21030547 |
T |
 |
| Q |
400 |
tttcactgctttttacaaaatcaagcatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttactcctcat |
499 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21030546 |
tttcactgctttttacaaaatcaaacctgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttactcctcat |
21030447 |
T |
 |
| Q |
500 |
ttggacctaaatcatgttttgtattctcctgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgtagtgtcaattttgttt |
599 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21030446 |
ttgtacctaaatcatgttctgtattctcctgaattcaaagtcaacttaatttctgttttcaaaatgtgtgattccttatcttgtagtgtcaattttgttt |
21030347 |
T |
 |
| Q |
600 |
ctaataa |
606 |
Q |
| |
|
||||||| |
|
|
| T |
21030346 |
ctaataa |
21030340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 538; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 1 - 606
Target Start/End: Original strand, 42134795 - 42135400
Alignment:
| Q |
1 |
caaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
42134795 |
caaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccactaatagtgtt |
42134894 |
T |
 |
| Q |
101 |
acagttgaatctggaaatgttagtaacactgagcatgggaatggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtgaacttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42134895 |
acagttgaatctggaaatgtcagcaacactgagcatgggaatggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtaaacttgcttc |
42134994 |
T |
 |
| Q |
201 |
aacaagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcttattgttccttatcagtcagg |
300 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42134995 |
aacaagcaactctgtcatcctcagctgtgtctccttctatttctacttcaaatcaactcaccacttcaccatccatgcctattgttccttatcagtcagg |
42135094 |
T |
 |
| Q |
301 |
tatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctcat |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
42135095 |
tatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtatgtttttcaaaatctcat |
42135194 |
T |
 |
| Q |
401 |
ttcactgctttttacaaaatcaagcatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttactcctcatt |
500 |
Q |
| |
|
||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42135195 |
ttcactgctttttacaaaatcaaacctgtccttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttactcctcatt |
42135294 |
T |
 |
| Q |
501 |
tggacctaaatcatgttttgtattctcctgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgtagtgtcaattttgtttc |
600 |
Q |
| |
|
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42135295 |
tgtacctaaatcatgttctgtattctcctgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgtagtgtcaattttgtttc |
42135394 |
T |
 |
| Q |
601 |
taataa |
606 |
Q |
| |
|
|||||| |
|
|
| T |
42135395 |
taataa |
42135400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 526; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 1 - 606
Target Start/End: Complemental strand, 18482972 - 18482367
Alignment:
| Q |
1 |
caaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
18482972 |
caaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacataccaggaaattccactgcctccactcaaggatccactaatagtgtt |
18482873 |
T |
 |
| Q |
101 |
acagttgaatctggaaatgttagtaacactgagcatgggaatggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtgaacttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
18482872 |
acagttgaatctggaaatgtcagtaacactgagcatgggaatggtgactcaggttttagtatttctcaagacagatatgagcaccttgtaaacttgcttc |
18482773 |
T |
 |
| Q |
201 |
aacaagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcttattgttccttatcagtcagg |
300 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18482772 |
aacaagcaactctgttatcctcagctgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcctattgttccttatcagtcagg |
18482673 |
T |
 |
| Q |
301 |
tatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctcat |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
18482672 |
tatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtatgtttttcaaaatctcat |
18482573 |
T |
 |
| Q |
401 |
ttcactgctttttacaaaatcaagcatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttactcctcatt |
500 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18482572 |
ttcactgctttttacaaaatcaaacctgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttactcctcatt |
18482473 |
T |
 |
| Q |
501 |
tggacctaaatcatgttttgtattctcctgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgtagtgtcaattttgtttc |
600 |
Q |
| |
|
|| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
18482472 |
tgtacctaaataatgttctgtattctcttgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgtagtggcaatttcgtttc |
18482373 |
T |
 |
| Q |
601 |
taataa |
606 |
Q |
| |
|
||||| |
|
|
| T |
18482372 |
gaataa |
18482367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 606
Target Start/End: Complemental strand, 38848637 - 38848024
Alignment:
| Q |
5 |
cacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgtacag |
104 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||| || |||||| | ||| |||||||| | | ||||| ||||| | ||||||| ||||| |
|
|
| T |
38848637 |
cacaccattgacacttgttatctgaagcatggatttcctcatcctaacaaatcagcaaattccaatacacttactcatggatctactaatagtgttacag |
38848538 |
T |
 |
| Q |
105 |
ttgaatctggaaatgttagtaacactgagcatgggaatggtgactcaggt------------ttcagtatttctcaagacagatatgagcaccttgtgaa |
192 |
Q |
| |
|
|||||||||||||| ||||||||| |||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38848537 |
ttgaatctggaaatacaagtaacactcagcaggggaatggtgattcaagtggtgattcaagtttcagtatttctcaagacagatatgagcaccttgtgag |
38848438 |
T |
 |
| Q |
193 |
cttgcttcaacaagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcttattgttccttat |
292 |
Q |
| |
|
||||||||||||||||||||||| | ||| |||||||||||||||||| | || ||||||||||| ||||| | |||||| | | ||| | ||| |
|
|
| T |
38848437 |
tttgcttcaacaagcaactttgttgcctacagctgtgtctccttctgtttccaactctaatcaactcactacttcccaatccattcctcttgccacatat |
38848338 |
T |
 |
| Q |
293 |
cagtcaggtatacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaa |
392 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||||||| | |||||| | ||| |||||||||||||||||| || ||||||||||||||||| || | |
|
|
| T |
38848337 |
cagtcaggtatacacagtgctttctcttgttcttttcatgttaattctataccttcttggatcatagattcaggagccaatgatcatgtctgtttctcta |
38848238 |
T |
 |
| Q |
393 |
aatctcatttcactgctttttacaaaatcaagcatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattttac |
492 |
Q |
| |
|
|| ||||||| ||| | |||||||| ||||| | ||| |||||||||||||| ||||||| ||| || ||||| ||||||||||| |||||| ||||||| |
|
|
| T |
38848237 |
aaactcattttacttcattttacaagatcaaacctgttcttgttactcttcctaatggtacttcaatttatgtgcattatgctggcaatgtacattttac |
38848138 |
T |
 |
| Q |
493 |
tcctcatttggacctaaatcatgttttgtattctcctgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgtagtgtcaat |
592 |
Q |
| |
|
|||| || | | | | ||||||||||||||| ||||| |||||||| || || ||||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
38848137 |
tccttatcttcatttgactcatgttttgtattcccctgagttcaaagttaatttgatttctgtttccaaaatttgtgattctttatcttgcagtgtcaat |
38848038 |
T |
 |
| Q |
593 |
tttgtttctaataa |
606 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
38848037 |
tttgtttctaataa |
38848024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 362; Significance: 0; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 5 - 421
Target Start/End: Complemental strand, 28521048 - 28520631
Alignment:
| Q |
5 |
cacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgtacag |
104 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
28521048 |
cacactattgatacttgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccactaatagtgttacag |
28520949 |
T |
 |
| Q |
105 |
ttgaatctggaaatgttagtaacactgagcatgggaat-ggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtgaacttgcttcaac |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28520948 |
ctgaatctggaaatgttagtaacactgagcatgggaataggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtgaacttgcttcaac |
28520849 |
T |
 |
| Q |
204 |
aagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcttattgttccttatcagtcaggtat |
303 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28520848 |
aagcaaccctgttatcctcagctgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcctattgttccttatcagtcaggtat |
28520749 |
T |
 |
| Q |
304 |
acaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctcatttc |
403 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28520748 |
acaaagtgctttctcatgctcttttcatgtcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctcatttc |
28520649 |
T |
 |
| Q |
404 |
actgctttttacaaaatc |
421 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
28520648 |
actactttttacaaaatc |
28520631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 385 - 606
Target Start/End: Complemental strand, 28520642 - 28520421
Alignment:
| Q |
385 |
tttttcaaaatctcatttcactgctttttacaaaatcaagcatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgta |
484 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28520642 |
ttttacaaaatctcatttcactaatttttacaaaattaaacatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgta |
28520543 |
T |
 |
| Q |
485 |
tattttactcctcatttggacctaaatcatgttttgtattctcctgaattcaaagtcaacttaatttctgtttccaaaatgtgtgattccttatcttgta |
584 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
28520542 |
tattttactcctcatttgtacctgaatcatgttttgtattctcttgaattcaaagtcaacttagtttctgtttccaaaatgtgtgattccttatcttgta |
28520443 |
T |
 |
| Q |
585 |
gtgtcaattttgtttctaataa |
606 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
28520442 |
gtgtcaattttgtttctaataa |
28520421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 489
Target Start/End: Complemental strand, 17481957 - 17481470
Alignment:
| Q |
2 |
aaccacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgta |
101 |
Q |
| |
|
||||||| ||||| || ||||| | |||||||||| | || || |||||| | || ||||||||| ||| | |||||| | ||||| ||||||| || |
|
|
| T |
17481957 |
aaccacattattgacacttgttatcagaagcatggactccctaactctaacaaatcatgaaattccaatgctttcactcatgaatccactaatagtgtta |
17481858 |
T |
 |
| Q |
102 |
cagttgaatctggaaatgttagtaacactgagcatgggaatggtgactcaggtttcagtatttctcaagacagatatgagcaccttgtgaacttgcttca |
201 |
Q |
| |
|
|||| |||| ||| |||| |||||||||||||| |||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||||| |||| |
|
|
| T |
17481857 |
cagtcgaatttggtaatggaggtaacactgagcattggaatggtgaatcaggtttcagtatttctcaggacacatatcagcaccttgtgaacttggttca |
17481758 |
T |
 |
| Q |
202 |
acaagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatcaactcaccacttcaccatccatgcttattgttccttatcagtcaggt |
301 |
Q |
| |
|
||||| ||| || ||| ||||| |||||||||||||||||||| |||||||||||||| | || | |||||| | | || | | ||||||||||| |
|
|
| T |
17481757 |
acaagaaacctttttaccctcaacagtgtctccttctgtttctacctcaaatcaactcactgcatctcaatccattcctcatgctacaaatcagtcaggt |
17481658 |
T |
 |
| Q |
302 |
atacaaagtgctttctcatgctcttttcatatcaattctttgcctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctcatt |
401 |
Q |
| |
|
|||||||||| |||||| | || |||||| | | |||||| || |||||||||||||||||| | |||||||||||||| ||||| || |||||||||| |
|
|
| T |
17481657 |
atacaaagtgttttctcttcttcctttcatgttagttctttaccaatttggatcatagattcaagagctaatgatcatgtttgtttctctaaatctcatt |
17481558 |
T |
 |
| Q |
402 |
tcactgctttttacaaaatcaagcatgtgcttgttactcttcccaatggtaattccatatatgttcattatgctggtaatgtatattt |
489 |
Q |
| |
|
||||| | ||| | |||||||| ||||| ||||||| |||||| |||||||||| ||| |||| ||||||| ||| ||||||||||| |
|
|
| T |
17481557 |
tcacttcatttcataaaatcaaacatgttcttgttagtcttcctaatggtaattttatacatgtgcattatgttggcaatgtatattt |
17481470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 7e-69; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 14505901 - 14505741
Alignment:
| Q |
5 |
cacaccattgatacctgttacctgaagcatggatttcccaatgctaacagaccaggaaattccactgcctccactcaaggatccattaatagttgtacag |
104 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
14505901 |
cacaccattgatacttgttacctgaagcatggatttcccaatgctaacggaccaggaaattccactgcctccactcaaggatccactaattgtgttacag |
14505802 |
T |
 |
| Q |
105 |
ttgaatctggaaatgttagtaacactgagcatgggaatggtgactcaggtttcagtatttc |
165 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14505801 |
ttgaatctggaaatgttagtaacactgagcatgggaatggtgaatcaggtttcagtatttc |
14505741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 345 - 535
Target Start/End: Complemental strand, 18834903 - 18834713
Alignment:
| Q |
345 |
ctatttggatcatagattcaggcgctaatgatcatgtctgtttttcaaaatctcatttcactgctttttacaaaatcaagcatgtgcttgttactcttcc |
444 |
Q |
| |
|
|||||||||||||||| | || ||||||||| |||| ||||| || || |||||||| || |||| || ||||| || ||||| | ||||| |||||| |
|
|
| T |
18834903 |
ctatttggatcatagacttagatgctaatgataatgtgtgtttctccaagtctcattttacctctttctataaaattaaacatgttcatgttagtcttcc |
18834804 |
T |
 |
| Q |
445 |
caatggtaattccatatatgttcattatgctggtaatgtatattttactcctcatttggacctaaatcatgttttgtattctcctgaattc |
535 |
Q |
| |
|
|||||||| |||||||||| ||||||| ||||||||| |||||| |||| ||||| | | |||||||| || ||||| ||||||||| |
|
|
| T |
18834803 |
taatggtaacaccatatatgtgcattatgttggtaatgtgtatttttctccacatttacatttgaatcatgtgttatattcacctgaattc |
18834713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 18835089 - 18834993
Alignment:
| Q |
159 |
gtatttctcaagacagatatgagcaccttgtgaacttgcttcaacaagcaactttgttatcctcagatgtgtctccttctgtttctacttcaaatca |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| | ||||| |||||||| |||||||||| |||||||| |
|
|
| T |
18835089 |
gtatttctcaagacagatatgagcaccttgtttccttgcttcaacaagaaaccttgatgccctcaactgtgtctcaacctgtttctacctcaaatca |
18834993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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