View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21394_high_9 (Length: 248)
Name: NF21394_high_9
Description: NF21394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21394_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 2643845 - 2644067
Alignment:
| Q |
7 |
gagaaaagaaaggagatattaatcttcattaaagaaagccacgcaccgtacaataaatgaactctctaacacaaagatcaaagaaattaaaatagtttaa |
106 |
Q |
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| T |
2643845 |
gagaaaagaaaggagatattaatcttcattaaagaaagccacgcaccgtacaataaatgaactctctaacacaaagatcaaagaaattaaaatagtttaa |
2643944 |
T |
|
| Q |
107 |
agcacaaaaacaacattgttatagttttgaagggaaatctaaagaagagcctaattgggatttggtttctctaataaacatagcattttggaccaccttt |
206 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2643945 |
agcacaaaaacaacattgttatagttttaaagggaaatctaaagaagagcctaattgggatttggtttctctaataaacatagcattttggaccaccttt |
2644044 |
T |
|
| Q |
207 |
ttagaaatccttaacatcccata |
229 |
Q |
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||||||||||||||||||||||| |
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| T |
2644045 |
ttagaaatccttaacatcccata |
2644067 |
T |
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