View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21395_high_16 (Length: 245)
Name: NF21395_high_16
Description: NF21395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21395_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 29366478 - 29366692
Alignment:
| Q |
19 |
tttctgaggtaccaacaattgcagtgtctgaaatcgtgatgaatgttaattttgtaagtcgttttttgcaatgttgttaattcacatgccgatcattttt |
118 |
Q |
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| T |
29366478 |
tttctgaggtaccaacaattgcagtgtctgaaatcgtgatgaatgttaattttgtaagtcgttttttgcaatgttgttaattcacatgccgatcattttt |
29366577 |
T |
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| Q |
119 |
tcttgttgagattaggggtaaaaagcagcactagtttttaataaatgttagattgtttcaattttaattaatttaatgttcaaaaatggtttgattgatt |
218 |
Q |
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| T |
29366578 |
tcttgttgagattaggggtaaaaagcagcattagtttttaataaatgttagattgtttcaattttaattaatttaatgttcaaaaatggtttgattgatt |
29366677 |
T |
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| Q |
219 |
tactagtaagatatt |
233 |
Q |
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| T |
29366678 |
tactagtaagatatt |
29366692 |
T |
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