View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21395_low_14 (Length: 268)
Name: NF21395_low_14
Description: NF21395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21395_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 32379780 - 32380029
Alignment:
| Q |
1 |
agagaaagataaagaatggtgaagaatggagtcttacagcatatgcaatggcgtagccatcaaaagtgcttgttccccgacccaattcatcaaggataac |
100 |
Q |
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| T |
32379780 |
agagaaagataaagaatggtgaagaatggagtcttacagcatatgcaatggcgtagccatcaaaagtgcttgttccccgacccaattcatcaaggataac |
32379879 |
T |
|
| Q |
101 |
aagagaatcttgagtagcattatgaagcactgatgcagtttctgtacactcaataaagaaggtacctaaaaacaaaaacatagttcattagaatcgcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32379880 |
aagagaatcttgagtagcattatgaagcactgatgcagtttctgtacactcaataaagaaggtacctaaaaacaaaaacatagttcattagaatcgcaaa |
32379979 |
T |
|
| Q |
201 |
gccataaattcatgaggtaaactgcatgactacacattgaaatattttag |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32379980 |
gccataaattcatgaggtaaactgcatgactacacattgaaatattttag |
32380029 |
T |
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