View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21395_low_18 (Length: 223)
Name: NF21395_low_18
Description: NF21395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21395_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 19065007 - 19065175
Alignment:
| Q |
32 |
aaacaaagtccatgattttattttacatttcttttnnnnnnnntaaaattacatactcttttggatata-tacatacatgaatttgtctggctttgatgg |
130 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
19065007 |
aaacaaagtccatgattttattttacatttctttaaaaaaa---aaaattacatactcttttggatataatacatacatgaatttgtctggctttgatgg |
19065103 |
T |
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| Q |
131 |
aggtttacccacaccctccatttttgctacctacgtcacc-cttcaatc-ttttttattattttctcatttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||| |
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| T |
19065104 |
aggtttacccacaccctccatttttgctacctacgcgacctcttcaatctttttttattattttttcatttt |
19065175 |
T |
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