View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21395_low_20 (Length: 202)
Name: NF21395_low_20
Description: NF21395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21395_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 31487067 - 31486895
Alignment:
| Q |
14 |
aaacaacaaagaagaaatgatagacattgatcacaacttagaaaaacatattcacaaacagatgggatgcatggctggtttgtttcaaatcttcgaccgt |
113 |
Q |
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| T |
31487067 |
aaacaacaaagaagaaatgatagacattgatcacaacttagataaacatattcacaaacagatgggatgcatggctggtttgtttcaaatcttcgaccgt |
31486968 |
T |
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| Q |
114 |
aaccattttctttctggcaaacgcatctacaacaacactaaaagattacctccggtaattcattcttcactgt |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31486967 |
aaccattttctttctggcaaacgcatctacaacaacactaaaagattacctccggtaattcattcttcactgt |
31486895 |
T |
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