View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21396_low_1 (Length: 409)
Name: NF21396_low_1
Description: NF21396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21396_low_1 |
 |  |
|
| [»] scaffold0197 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 2312419 - 2312301
Alignment:
| Q |
275 |
tatattcttgtggcatgagtataatgcttaattcaattgaaacaacttgagttatcat---ttaattaaaaccaggatggagcagtatgcagatcaacat |
371 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2312419 |
tatattcttgtggcatgagtataatgtttaattcaattgaaacaacttgagttatcatcatttaattaaaaccaggatggagcagtatgcagatcaacat |
2312320 |
T |
 |
| Q |
372 |
tttcatctagtggtctaaa |
390 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
2312319 |
tttcatctagtagtctaaa |
2312301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 212
Target Start/End: Complemental strand, 12318533 - 12318374
Alignment:
| Q |
51 |
taggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggttttgttttacacctggttgtta |
150 |
Q |
| |
|
||||||||||||| |||| ||||||||| |||||| ||||| |||| ||||||||| ||||||||| || ||||| |||||| |||||| || |
|
|
| T |
12318533 |
taggtaaacaattttttggtgttgttctcttttctttactccctttatcttgtttattcttt--ggttcaattatgattttgctttacaattggttgcta |
12318436 |
T |
 |
| Q |
151 |
gattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
| ||| ||||||||| |||||| ||| | || |||||||||||||| |||| ||||||||| |
|
|
| T |
12318435 |
ggttaaatctagatctgttgttgttgcgtgtgcttattttggttattggttgccattgatac |
12318374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 2926647 - 2926780
Alignment:
| Q |
30 |
taggtcattgttggacgaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggtt |
129 |
Q |
| |
|
||||||||||||| || | |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | || |||| ||||| |
|
|
| T |
2926647 |
taggtcattgttgcaccgaactaggtaaacaattctttggtgttgttctttttactctactctctttatcttgttta--ttctttgatttaattatggtt |
2926744 |
T |
 |
| Q |
130 |
ttgttttacacctggttgttagattagatctagatc |
165 |
Q |
| |
|
|| |||||||| || |||||||||||||| |||||| |
|
|
| T |
2926745 |
ttattttacacttgattgttagattagatatagatc |
2926780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 2927117 - 2927153
Alignment:
| Q |
354 |
cagtatgcagatcaacattttcatctagtggtctaaa |
390 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2927117 |
cagtatgcagatcaacattttcatctagtagtctaaa |
2927153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 9109360 - 9109275
Alignment:
| Q |
121 |
attgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcat |
206 |
Q |
| |
|
||||||||| || || ||| |||||| ||| ||||||||||||| ||||||||| || || ||||||| |||||| |||||||| |
|
|
| T |
9109360 |
attgtggttatgcttcacagttggttgctagcttagatctagatctgttgttattacttgtggttattttagttattggttgtcat |
9109275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 3315688 - 3315737
Alignment:
| Q |
241 |
taggcactaactcatccacattgcttggctgctatatattcttgtggcatga |
292 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||| |||||||||||| ||||| |
|
|
| T |
3315688 |
taggcactaactcatcca--ttgcttgtctgctgtatattcttgtgacatga |
3315737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 316901 - 317083
Alignment:
| Q |
30 |
taggtcattgttggac-gaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggt |
128 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||||||| |||||||| ||||| ||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
316901 |
taggtcattgttggaccgaactt-ggtaaacaattctttgt-gttgttctcttttccctactctctttattttgtttattcttt--ggttcaattgtggt |
316996 |
T |
 |
| Q |
129 |
tttgttttacacctggttgttagattagatctagatc---cgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
|||| ||||||| |||||| ||||| ||||||||||| ||||||| ||| || || |||||||||||||| ||||||| |||||| |
|
|
| T |
316997 |
tttgctttacacttggttgctagataagatctagatctgtcgttgttgttgcttgtggttattttggttattggttgtcactgatac |
317083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 10700591 - 10700486
Alignment:
| Q |
121 |
attgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgataccaacccca |
220 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||| || ||||||| ||||||||| || |||||||||||||| ||||||||||||||| || || |
|
|
| T |
10700591 |
attgtggttttgatttacacttgattgttagattaaatatagatccattgttattgcttgcagttattttggttattggttgtcattgatacccgcctca |
10700492 |
T |
 |
| Q |
221 |
cacatc |
226 |
Q |
| |
|
|||||| |
|
|
| T |
10700491 |
cacatc |
10700486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 212
Target Start/End: Complemental strand, 10054840 - 10054666
Alignment:
| Q |
36 |
attgttggacgaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggttttgttt |
135 |
Q |
| |
|
|||||||||| || ||||||||| | |||||| |||||||| ||||||| |||||| ||| ||||||||| | ||| ||||| ||||| || |
|
|
| T |
10054840 |
attgttggaccaaactaggtaaacgactctttggtgttgttccattttctgtactctttttatcttgtttatttttt--gcttcgattgtaattttgctt |
10054743 |
T |
 |
| Q |
136 |
tacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
||||| |||||| |||||||||||||||| |||| | ||| | || |||||||| |||||||||||||||||||| |
|
|
| T |
10054742 |
tacacttggttgctagattagatctagatttgttgatgttgcatgtggttattttgattattagttgtcattgatac |
10054666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 8038418 - 8038498
Alignment:
| Q |
115 |
ggttcaattgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggtta |
195 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| ||||| ||| || ||||| ||||||||| |
|
|
| T |
8038418 |
ggttcgattgtggtttttctttacacttggttgctagattagatcaagatctattgttgttgattgtgattgttttggtta |
8038498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 8445916 - 8446008
Alignment:
| Q |
116 |
gttcaattgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||| |||||||||||||| |||||| ||| || || |||| ||| |||| ||||| ||||||||| |
|
|
| T |
8445916 |
gttcgattgcggttttgttttacacttggttg----attagatctagatctgttgttgttgcttgtggttatcttgattatcagttgccattgatac |
8446008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 14689455 - 14689398
Alignment:
| Q |
33 |
gtcattgttggacgaagttaggtaaacaattctttgttgttgttctattttctctact |
90 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
14689455 |
gtcattgttggactgaactaggtaaacaattctttgttgttactctcttttctctact |
14689398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 5739940 - 5739845
Alignment:
| Q |
117 |
ttcaattgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||||| ||||| |||||| ||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
5739940 |
ttcagttgtggttttgctttacacttggttgctagattagatttagatatgttgttgttgattatgattattttggttattagttatcattgatac |
5739845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 11660825 - 11660880
Alignment:
| Q |
117 |
ttcaattgtggttttgttttacacctggttgttagattagatctagatccgttgtt |
172 |
Q |
| |
|
||||| |||||||||| ||||||| |||||| ||||||||||||||||| |||||| |
|
|
| T |
11660825 |
ttcaaatgtggttttgctttacacttggttgctagattagatctagatctgttgtt |
11660880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 17763245 - 17763312
Alignment:
| Q |
149 |
tagattagatctagatccgttgttattgtttatgattattt-----tggttattagttgtcattgatac |
212 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||| |
|
|
| T |
17763245 |
tagattagatctagatt-gttgttattgtttgtgattatttacatttggttattggttgtcattgatac |
17763312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 11137157 - 11137343
Alignment:
| Q |
25 |
cataataggtcattgttggac-gaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaatt |
123 |
Q |
| |
|
|||| |||||||||||||||| ||| | ||||||| ||||||||| ||||||| | ||||||||||||||||| ||||||||| ||||| ||| |
|
|
| T |
11137157 |
catagtaggtcattgttggaccgaactaaggtaaagaattctttgatgttgttttgttttctctactctctttatcttgttta--ttcattggttcgatt |
11137254 |
T |
 |
| Q |
124 |
gtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
|||||||| |||| || || ||| |||||||||| ||||| ||| || ||| || || |||||||| |||| |||||||||||||| |
|
|
| T |
11137255 |
gtggtttttctttatacttgattgctagattagatttagatatgttattgttgcttgtggttattttgattatcggttgtcattgatac |
11137343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 7624894 - 7624813
Alignment:
| Q |
115 |
ggttcaattgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttatt |
197 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||| ||| |||||||||||| ||||||| |||||| | ||||||||||||| |
|
|
| T |
7624894 |
ggttcgattgtggttttactttacacatggttgctag-ttagatctagattcgttgttgttgtttgcggctattttggttatt |
7624813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 20937815 - 20937974
Alignment:
| Q |
51 |
taggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggttttgttttacacctggttgtta |
150 |
Q |
| |
|
||||||||||||| ||| ||| ||||| ||||||||||||||||| ||||||||| ||||| |||||| |||| ||||||| || || || |
|
|
| T |
20937815 |
taggtaaacaattattttgtgtggttctcttttctctactctctttatcttgttta--ttatttggttcgattgtgattttactttacacttgattaata |
20937912 |
T |
 |
| Q |
151 |
gattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
|||||||||||||| |||||| || || | |||||||| |||||||||||||||||||| |
|
|
| T |
20937913 |
gattagatctagatttgttgttgctgcttgtagttattttgcttattagttgtcattgatac |
20937974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 26323101 - 26323027
Alignment:
| Q |
30 |
taggtcattgttggac-gaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgtt |
104 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||| |||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
26323101 |
taggtcattgttggaccgaagtg-ggtaaacaattctttggtgttattctcttttctctactctctttatcttgtt |
26323027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 5270592 - 5270689
Alignment:
| Q |
115 |
ggttcaattgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttat-gattattttggttattagttgtcattgata |
211 |
Q |
| |
|
||||| |||||||||||| |||||| |||||| ||||||||||||||||| ||||| ||| || | | || |||| |||||| ||||||||||||| |
|
|
| T |
5270592 |
ggttcgattgtggttttgcattacacttggttgctagattagatctagatctattgttgttgcttgtggtttttttttgttattggttgtcattgata |
5270689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 41961624 - 41961715
Alignment:
| Q |
121 |
attgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcattgatac |
212 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||||||||||||||| ||||| ||| || | || ||||||||||| |||||||||||||| |
|
|
| T |
41961624 |
attgtggttttgctttaaacctggttactagattagatctagatctattgttgttgcttgtagtttttttggttattggttgtcattgatac |
41961715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 38811221 - 38811145
Alignment:
| Q |
30 |
taggtcattgttggacgaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgttta |
106 |
Q |
| |
|
|||||||||||||||| | | |||||||||||||| | ||||||||| ||||||||||||||||| | ||||||| |
|
|
| T |
38811221 |
taggtcattgttggaccgaactgggtaaacaattcttcggtgttgttctcttttctctactctctttatattgttta |
38811145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 3786126 - 3786231
Alignment:
| Q |
57 |
aacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggttttgttttacacctggttgttagattag |
156 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||||||||||| ||||||| | ||||| ||||| ||||||||||||| |||||| || ||||| |
|
|
| T |
3786126 |
aacaattatttggtgttgttctcttttctctactctctttatcttgttca--ttctttggttcgattgtaattttgttttacacttggttgctatattag |
3786223 |
T |
 |
| Q |
157 |
atctagat |
164 |
Q |
| |
|
|||||||| |
|
|
| T |
3786224 |
atctagat |
3786231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 6719781 - 6719866
Alignment:
| Q |
121 |
attgtggttttgttttacacctggttgttagattagatctagatccgttgttattgtttatgattattttggttattagttgtcat |
206 |
Q |
| |
|
|||||||||||| ||| ||| ||||| ||||||||||||||||| |||||| ||| | ||| | ||||||||||| |||||||| |
|
|
| T |
6719781 |
attgtggttttgctttgcacttggtttctagattagatctagatctgttgtttttgcctgtgactgttttggttattggttgtcat |
6719866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 33090042 - 33090093
Alignment:
| Q |
55 |
taaacaattctttgttgttgttctattttctctactctctttttcttgttta |
106 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
33090042 |
taaacaattctttgaagttgttctcttttctctgctctctttatcttgttta |
33090093 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 28684733 - 28684697
Alignment:
| Q |
137 |
acacctggttgttagattagatctagatccgttgtta |
173 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
28684733 |
acacttggttgttagattagatctaaatccgttgtta |
28684697 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0197 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 1427 - 1295
Alignment:
| Q |
30 |
taggtcattgttggacgaagttaggtaaacaattctttgttgttgttctattttctctactctctttttcttgtttannnnnnnnggttcaattgtggtt |
129 |
Q |
| |
|
|||||||||||||||| || || |||||||||||||||| |||| |||| || ||| |||||||||| |||| |||| |||| ||||||||| |
|
|
| T |
1427 |
taggtcattgttggaccaaattgggtaaacaattctttgatgtttttctcttctctttactctctttatcttattta--ttttttggtttgattgtggtt |
1330 |
T |
 |
| Q |
130 |
ttgttttacacctggttgttagattagatctagat |
164 |
Q |
| |
|
|| ||||||| ||||| |||||||||||||||| |
|
|
| T |
1329 |
ttactttacacttggtttctagattagatctagat |
1295 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 16676449 - 16676498
Alignment:
| Q |
115 |
ggttcaattgtggttttgttttacacctggttgttagattagatctagat |
164 |
Q |
| |
|
||||| |||||||||||| ||||||| | |||| |||||||||||||||| |
|
|
| T |
16676449 |
ggttcgattgtggttttgatttacactttgttgctagattagatctagat |
16676498 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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