View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21396_low_4 (Length: 218)
Name: NF21396_low_4
Description: NF21396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21396_low_4 |
 | |
|
| [»] scaffold0205 (2 HSPs) |
| | |
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| [»] scaffold0002 (3 HSPs) |
| | |
|
| [»] scaffold0380 (1 HSPs) |
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| [»] scaffold0294 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0092 (1 HSPs) |
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|
| [»] scaffold0103 (1 HSPs) |
| | |
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| [»] scaffold0479 (2 HSPs) |
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| [»] scaffold0140 (1 HSPs) |
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| [»] scaffold0023 (1 HSPs) |
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| [»] scaffold0263 (1 HSPs) |
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| [»] scaffold0013 (1 HSPs) |
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| [»] scaffold0464 (2 HSPs) |
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| [»] scaffold0505 (1 HSPs) |
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| [»] scaffold0360 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0518 (1 HSPs) |
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| [»] scaffold0074 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 20)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 19277264 - 19277075
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggcag |
108 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
19277264 |
gagtagcaacggcggctgagaatgcttcgatgtgacggtaacggtttccggtacggcggcgatgagtctttccggtggaacaaaaggtgcctgcagacag |
19277165 |
T |
|
| Q |
109 |
ctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19277164 |
ctagaactccgacgctcaagtcgctc--gtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
19277075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 9403196 - 9403264
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9403196 |
ctcaagtcaataatggaactgagaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagg |
9403264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34064220 - 34064287
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34064220 |
tcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
34064287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 12449650 - 12449582
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12449650 |
ctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagg |
12449582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 19730658 - 19730590
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| | |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
19730658 |
ctcaagtcaataatggaactgagaaagagtgtgtaagaagtgtcgtgtaaagtgatgtgtaccttgagg |
19730590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 27861017 - 27860947
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||| |||||||||| ||| | |||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27861017 |
cactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtgatgtgtactttgagg |
27860947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 31295602 - 31295534
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
31295602 |
ctcaagtcagtaatgaaactgagaaagagtgtgtatgaagtgttgtgaaaagtgatatgtacctcgagg |
31295534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 16343601 - 16343669
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttga |
198 |
Q |
| |
|
||||||||| |||||||||| ||||| ||| ||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
16343601 |
cactcaagtcagtaatggaactgagagagaaagtgtaagaagtgttgtggaaagtgatgtgtactttga |
16343669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 34187321 - 34187390
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||| |||||| ||| ||||||| |||||||||||| |
|
|
| T |
34187321 |
cactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtg-aaagtgaattgtaccttgagg |
34187390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 689924 - 689856
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
689924 |
ctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtgaaaagtgaatcgtaccttgagg |
689856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 22497479 - 22497297
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
|||| |||| || ||| ||||||||| ||||| | |||||| || ||||| ||||||||||||||||| || |||||| |||||||| ||||| || |
|
|
| T |
22497479 |
gagtcgcaacggtggcagagaatgctccgatg-gtcggtaatggcttccgatgcggcggcgatgagtcttcgcgatggaacgaaaggtgcttgcagacac |
22497381 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
| ||| |||||||||||||||||| ||||||||| || | |||| || ||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
22497380 |
gttagcactccgacgctcaagtca---------gtaatggaacagaaagagagagtataaaaagtgttgtgaaaagtgttgtgtaccttgagg |
22497297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 12488038 - 12487995
Alignment:
| Q |
157 |
agagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
12488038 |
agagtgtgtaagtagtgttgtgaaaagtgatgtgtacattgagg |
12487995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 23768217 - 23768280
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacct |
195 |
Q |
| |
|
||||||| |||||| ||| ||| | | |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23768217 |
ctcaagtcagtaattgaactgaaagatagtgtgtaagaagtgttgtggaaagtgatgtgtacct |
23768280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 19305488 - 19305542
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||| |||||||||||||||||| |
|
|
| T |
19305488 |
ctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtga |
19305542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 3404931 - 3404879
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaa |
182 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
3404931 |
cacttaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaa |
3404879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 12424380 - 12424317
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacctt |
196 |
Q |
| |
|
|||||| |||||||||| ||||| ||| || ||| ||||||||||||||||| |||||||||| |
|
|
| T |
12424380 |
tcaagtcagtaatggaactgagagagaaagtctaaaaagtgttgtgaaaagtgttgtgtacctt |
12424317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 14080508 - 14080561
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
14080508 |
ctcaagttagtaatg-aactgagaaagagtgtgtagtaagtgttgtgaaaagtga |
14080561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 18147330 - 18147384
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| | |||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
18147330 |
ctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtga |
18147384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 25008457 - 25008415
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgt |
174 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||| |||||| |
|
|
| T |
25008457 |
ctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtgt |
25008415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 17380123 - 17380175
Alignment:
| Q |
134 |
caagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||| |||||| ||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
17380123 |
caagtcagtaatagaactgagaaagagtgtgaataaagtgttgtgaaaagtga |
17380175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 13292295 - 13292122
Alignment:
| Q |
19 |
ggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactc |
117 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | | ||| |||| |
|
|
| T |
13292295 |
ggcggcagagaatgctccgatgtgacggtaacagtttccggcacggcggcgatgagtcttcgtggtggaaggaaaggtgtctgcaggtacgttagcactc |
13292196 |
T |
|
| Q |
118 |
cgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||||| |||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13292195 |
taacgctcaagtca---------gtaatgaaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
13292122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 196
Target Start/End: Complemental strand, 16987257 - 16987095
Alignment:
| Q |
26 |
gagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgct |
124 |
Q |
| |
|
||||||||| || ||||||| |||||| ||| || |||||||| ||||||||| ||||||||| |||||||| ||| |||| | ||| |||| ||| || |
|
|
| T |
16987257 |
gagaatgctccggtgtgacgctaacggcttctggtacggcggcaatgagtcttcgcggtggaacgaaaggtgcatgcgggcacgttagcactctgacact |
16987158 |
T |
|
| Q |
125 |
caagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacctt |
196 |
Q |
| |
|
|||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16987157 |
caagcca---------gtaatggaattgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtccctt |
16987095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 34854267 - 34854328
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtac |
193 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34854267 |
ctcaagttagtaatgaaactgagaaagagtgtgtaagaaatgttgtgaaaagtgatgtgtac |
34854328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 5929080 - 5929013
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttg |
197 |
Q |
| |
|
||||||||| |||||||||| ||| | |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5929080 |
cactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtgatgtgtcccttg |
5929013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 9868101 - 9867998
Alignment:
| Q |
29 |
aatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaa |
127 |
Q |
| |
|
|||||||||||||||||||||||| |||| | |||||||||| ||||||| |||||| || |||||||| |||||| | | ||| |||| ||||||||| |
|
|
| T |
9868101 |
aatgcttcgatgtgacggtaacggcttccagaacggcggcgacgagtcttcgcggtgggacgaaaggtgcatgcaggaacgttagcactctgacgctcaa |
9868002 |
T |
|
| Q |
128 |
gtca |
131 |
Q |
| |
|
|||| |
|
|
| T |
9868001 |
gtca |
9867998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 9135523 - 9135374
Alignment:
| Q |
29 |
aatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaa |
127 |
Q |
| |
|
||||||||| ||||||||||||||||||| | ||||||| | | |||||| ||||||||| |||||||| | ||||| | ||| |||| |||||||| |
|
|
| T |
9135523 |
aatgcttcggtgtgacggtaacggtttccagtacggcggtgttaagtcttcacggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaa |
9135424 |
T |
|
| Q |
128 |
gtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
9135423 |
gtca---------gtaatggaattgagaaagagtgtgtaaaaactgttgtgaaaagtga |
9135374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 10287663 - 10287609
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10287663 |
ctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaagtga |
10287609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 39879411 - 39879465
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||| || ||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
39879411 |
ctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttgtaaaaagtga |
39879465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 12265274 - 12265176
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctt-tccggtggaacaaaaggtgcctgcaggca |
107 |
Q |
| |
|
|||| |||| |||||| ||||||||| ||||| ||||||||| |||||| ||||| |||||| |||| | |||||||||||||||||| |||||||| |
|
|
| T |
12265274 |
gagtcgcaatggcggcagagaatgctccgatgat-cggtaacggcttccggtgcggcgacgatgactcttctacggtggaacaaaaggtgcatgcaggca |
12265176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 1979086 - 1979146
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgta |
192 |
Q |
| |
|
||||||| |||||||||| ||||| ||| || |||||||||||||||| |||| |||||| |
|
|
| T |
1979086 |
ctcaagtcagtaatggaactgagagagaaagtctaagaagtgttgtgaagagtgttgtgta |
1979146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 12644753 - 12644817
Alignment:
| Q |
68 |
cgatgagtctttccggtggaacaaaaggtgcctgcaggc-agctagaactccgacgctcaagtca |
131 |
Q |
| |
|
||||||||||| ||||||||| |||||||| ||||||| || ||| ||||||||||||| |||| |
|
|
| T |
12644753 |
cgatgagtcttcacggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtca |
12644817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 18774013 - 18774073
Alignment:
| Q |
140 |
agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||| ||||| ||| || ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
18774013 |
agtaatggaactgagagagaaagtcaaagaagtgtagtgaaaagtgttgtgtaccttgagg |
18774073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 15742317 - 15742153
Alignment:
| Q |
27 |
agaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctc |
125 |
Q |
| |
|
|||||||| || |||||||||||||||||| | ||||||| ||||||||||| |||||| | |||||||||||| |||| | ||| |||| |||||| |
|
|
| T |
15742317 |
agaatgctccggtgtgacggtaacggtttctgacacggcgacgatgagtcttcgtggtggagcgaaaggtgcctgctggcacgttagcactcttacgctc |
15742218 |
T |
|
| Q |
126 |
aagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgag |
199 |
Q |
| |
|
|||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15742217 |
aagtca---------gtaatggaactgagaaaaagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgag |
15742153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 15514628 - 15514560
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15514628 |
ctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagg |
15514560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 12683725 - 12683863
Alignment:
| Q |
39 |
tgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaag |
137 |
Q |
| |
|
||||||||| |||||||||| ||| || |||||||||||| ||||||||| ||||||||||||||||| | ||| ||||| ||| |||||| |
|
|
| T |
12683725 |
tgtgacggtgacggtttccgt-acgacgacgatgagtctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacg---------ctcaag |
12683814 |
T |
|
| Q |
138 |
tgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
| ||||||| || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
12683815 |
ttagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtga |
12683863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 14602082 - 14602014
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||| || ||| | ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14602082 |
ctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtaccttgagg |
14602014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 47253301 - 47253355
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
47253301 |
ctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtgaaaagtga |
47253355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 5518564 - 5518632
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||| ||| ||||| ||| |||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
5518564 |
ctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtggaaagtgatgcgtaccttgagg |
5518632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 16012538 - 16012467
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgaggtga |
203 |
Q |
| |
|
||||||| |||||||||| ||||| ||||||||||||||| |||||| ||||||| |||| |||||||||| |
|
|
| T |
16012538 |
ctcaagtcagtaatggaactgagatagagtgtgtaagaagcattgtgagaagtgatatgtatcttgaggtga |
16012467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 13896538 - 13896478
Alignment:
| Q |
140 |
agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||| |||| ||| | ||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13896538 |
agtaagggaactgaaagagattgtataagaagtgttgtggaaagtgatgtgtaccttgagg |
13896478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 19809725 - 19809793
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||| || | |||||||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
19809725 |
ctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagg |
19809793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 1638384 - 1638317
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||| |||||||||| ||||| ||| || ||||||||||| |||||||| |||||||||||||| |
|
|
| T |
1638384 |
tcaagtcagtaatggaactgagagagaaagtctaagaagtgttaagaaaagtgttgtgtaccttgagg |
1638317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 19643729 - 19643780
Alignment:
| Q |
135 |
aagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
19643729 |
aagtcagtaatggaactgagaaagagtgtgtagaaagtcttgtgaaaagtga |
19643780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 10981888 - 10981932
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgt |
174 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| |||||| |
|
|
| T |
10981888 |
cactcaagtcagtaatggaaccgagaaagagtgtgtaaaaagtgt |
10981932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 25066201 - 25066237
Alignment:
| Q |
165 |
taagaagtgttgtgaaaagtgatgtgtaccttgaggt |
201 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
25066201 |
taagacgtgttgtgaaaagtgttgtgtaccttgaggt |
25066237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0205 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0205
Description:
Target: scaffold0205; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 11079 - 10914
Alignment:
| Q |
27 |
agaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctc |
125 |
Q |
| |
|
|||||||| ||||| | |||||||| |||||| ||||||||||||| ||| | ||||||||||||||||| |||||||| | ||| ||||| |||||| |
|
|
| T |
11079 |
agaatgctccgatgagtcggtaacgacttccggtacggcggcgatgaatctctgcggtggaacaaaaggtgtatgcaggcacgttagcactccaacgctc |
10980 |
T |
|
| Q |
126 |
aagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||| | ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979 |
aagtcaat---------aatggaactgaaagagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
10914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0205; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 22910 - 22978
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22910 |
ctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttgtgaaaagtgacgtgtaccttgagg |
22978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 63; Significance: 1e-27; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 25537331 - 25537497
Alignment:
| Q |
26 |
gagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgct |
124 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||| ||| | ||| ||||| ||||| |
|
|
| T |
25537331 |
gagaatgctctggtgtgacggtaacggtttctggcacggcggcgaagagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcactccaacgct |
25537430 |
T |
|
| Q |
125 |
caagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||| | | ||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
25537431 |
caag--att-------gtaatggaactgagaaagattgtgtatgaagtgttgtgaaaagtgatgtataccttgagg |
25537497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 22865670 - 22865853
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
||||||||| |||||| ||||||||| || |||||||||||||| || |||||||| ||||| ||||| | ||||||| |||||||| |||||| | |
|
|
| T |
22865670 |
gagtagcaacggcggcagagaatgctccggtgtgacggtaacggctttcggcacggtggcgacatgtcttcgcagtggaacgaaaggtgcatgcaggtac |
22865769 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
| ||| ||| ||||||||||| | ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22865770 |
gttagcactttgacgctcaagtta---------gtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaaagtgatgtgtaccttgagg |
22865853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 24647320 - 24647376
Alignment:
| Q |
140 |
agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacctt |
196 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24647320 |
agtaatggaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtatacctt |
24647376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 25829045 - 25828987
Alignment:
| Q |
142 |
taatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
25829045 |
taatggaattgagaaaaagtgtgtaagaagtattgtgaaaagtgatgtgtcccttgagg |
25828987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 22903117 - 22903171
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
22903117 |
ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga |
22903171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 31202593 - 31202487
Alignment:
| Q |
26 |
gagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgct |
124 |
Q |
| |
|
||||||||| | ||||||||||||| ||| | ||||||||||||||||||| |||||||||| || |||||| |||| | | ||| | ||||||||| |
|
|
| T |
31202593 |
gagaatgctctggtgtgacggtaacgacttctgacacggcggcgatgagtcttcgcggtggaacagaaagtgcctacaggaacgttagcattccgacgct |
31202494 |
T |
|
| Q |
125 |
caagtca |
131 |
Q |
| |
|
||||||| |
|
|
| T |
31202493 |
caagtca |
31202487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 26994673 - 26994619
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| || | |||||||||||||||| |
|
|
| T |
26994673 |
ctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtga |
26994619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 24546391 - 24546431
Alignment:
| Q |
157 |
agagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttga |
198 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
24546391 |
agagtgtataagaagtgttgtg-aaagtgatgtgtaccttga |
24546431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 12731743 - 12731560
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
||||||||| ||||| ||||||| |||| ||||||||||| || ||||||||||||||||| ||||||| |||||||| || ||||||| || || |
|
|
| T |
12731743 |
gagtagcaacagcggcagagaatgtttcggtgtgacggtaaaggcttccggcacggcggcgaagagtcttcgaggtggaacgaatggtgcctacaaccat |
12731644 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
| ||| ||||||||||||| |||| | ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12731643 |
gttagtactccgacgctcacgtcatt---------aatggaactgagaaagagtgtataagaagtgttgtgaaaagtgatgtgaaccttgagg |
12731560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 12516209 - 12516277
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
12516209 |
ctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaaaagtgatatgtaccttgagg |
12516277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 14860158 - 14860098
Alignment:
| Q |
140 |
agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14860158 |
agtaatggaactgagaaacagtttgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
14860098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 12252010 - 12252071
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgt |
191 |
Q |
| |
|
||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12252010 |
cactcaagtcagtaacgaaaatgagaaagagtgtgtaagaattgttgtgaaaagtgatgtgt |
12252071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 9781575 - 9781514
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgt |
191 |
Q |
| |
|
||||||| | ||||||| || ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9781575 |
cactcaaatcagtaatgtaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtgt |
9781514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 17143816 - 17143762
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
17143816 |
ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga |
17143762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 25495962 - 25496026
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacctt |
196 |
Q |
| |
|
||||||| |||||| || ||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
25495962 |
ctcaagtcagtaatcaaactgagaaagagtgtgtaagaagagttgaaaaaagtgatgtgtacctt |
25496026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 30606952 - 30607020
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| | |||||||||| |
|
|
| T |
30606952 |
ctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaattataccttgagg |
30607020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 1770849 - 1770904
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgat |
187 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
1770849 |
ctcaagttagtaatggaactgaggaagagtgtgtagaaagtgttgtgaaaagtgat |
1770904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 28715547 - 28715501
Alignment:
| Q |
140 |
agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
28715547 |
agtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtga |
28715501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 9801153 - 9801097
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
9801153 |
cactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaaaagtga |
9801097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 21342354 - 21342300
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| ||| ||||||||| || |||||||||||||||||| |
|
|
| T |
21342354 |
ctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaaaagtga |
21342300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 21652666 - 21652734
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| | ||| ||| ||||||||||||||| || |||||| | |||||| ||||| |
|
|
| T |
21652666 |
ctcaagtcagtaatggaactaagagagaatgtgtaagaagtgttatggaaagtgttatgtaccctgagg |
21652734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 23728887 - 23728819
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23728887 |
ctcaagtcattaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
23728819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 14255212 - 14255051
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
||||||||| |||||| ||||||||| || ||||||||||| || ||||||| ||||||||||||||||| |||||||| || |||||||||| ||| |
|
|
| T |
14255212 |
gagtagcaacggcggcagagaatgctccggtgtgacggtaatggcttccggcgcggcggcgatgagtcttcgtggtggaacgaagggtgcctgcaagcac |
14255113 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtg |
178 |
Q |
| |
|
| ||| ||||| ||||||||||| | ||||| || |||||||||||||||||||||||||||| |
|
|
| T |
14255112 |
gatagcactccaacgctcaagtc---------attaatgaaactgagaaagagtgtgtaagaagtgttgtg |
14255051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 4601669 - 4601486
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
||||||||| || ||| || |||||| | ||||||||||| |||||||||| ||||||||| |||||| ||||||||| ||||||| ||||||||| |
|
|
| T |
4601669 |
gagtagcaacggtggcagaaaatgctctggtgtgacggtaattgtttccggcatggcggcgataagtcttcgcggtggaacgaaaggtgactgcaggcac |
4601570 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
| ||| ||||||||||||||||| ||||||| || ||||||| | ||||||| ||||| ||||||| |||||||| |||||||| |
|
|
| T |
4601569 |
gttagcactccgacgctcaagtc---------agtaatgaaactgagaaataatgtgtaataagtgctgtgaaatttgatgtgtcccttgagg |
4601486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 25408120 - 25408188
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||| || ||| | ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25408120 |
ctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgatgtgtcccttgagg |
25408188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 26977681 - 26977772
Alignment:
| Q |
41 |
tgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtca |
131 |
Q |
| |
|
|||| |||||||||||||| || |||| ||||| ||||| ||||||||| ||||||||||||||||| | ||| ||||| |||||||||||| |
|
|
| T |
26977681 |
tgacagtaacggtttccggtacagcggtgatgaatctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtca |
26977772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 12177408 - 12177478
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
12177408 |
cactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagg |
12177478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 16299640 - 16299580
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtac |
193 |
Q |
| |
|
|||||| ||||||| || |||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
16299640 |
tcaagtaagtaatgaaactgagaaagagtgcgtaagaagtgttgtgaaaaatgatgtgtac |
16299580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 5671794 - 5671848
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
5671794 |
ctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga |
5671848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 21682772 - 21682589
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
|||| |||| || ||| |||||||||| |||| | ||||||| | |||||| ||||||||||||||||| | | ||||||| |||||||||| ||| | |
|
|
| T |
21682772 |
gagtcgcaacggtggcagagaatgctttgatgggtcggtaacagcttccggtacggcggcgatgagtctctgctgtggaacgaaaggtgcctataggtac |
21682673 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaa-agagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
| | | ||||| ||||||||||| |||||||||| | |||| |||||||||||||| | ||||||||||| ||||||||||||||| |
|
|
| T |
21682672 |
gtttgcactccaacgctcaagtc---------agtaatggaact-agaagagagtgtgtaagaaatattgtgaaaagtaatgtgtaccttgagg |
21682589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 22414724 - 22414807
Alignment:
| Q |
49 |
acggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtca |
131 |
Q |
| |
|
||||||||| | |||| | |||||||||||| ||||||||| ||||||||| ||||||| | ||| |||| ||||||||||||| |
|
|
| T |
22414724 |
acggtttccagtacggtgacgatgagtctttgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtca |
22414807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 1659856 - 1659802
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| | ||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1659856 |
ctcaagtcaataatggatctgagaaagaatgtgtaagaagtgttgtgaaaagtga |
1659802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 16030419 - 16030473
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| ||| ||||||||||| |||||||||||||||||| |
|
|
| T |
16030419 |
ctcaagtcagtaatggaactgaataagagtgtgtagaaagtgttgtgaaaagtga |
16030473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 33101574 - 33101520
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||||| ||||||| |||||||| |||||||||||||||||| |
|
|
| T |
33101574 |
ctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttgtgaaaagtga |
33101520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 34273111 - 34273165
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||| |||| |||||||||||||||| |||||||||| ||||||| |
|
|
| T |
34273111 |
ctcaagtcagtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga |
34273165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 379738 - 379808
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
379738 |
cactgaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
379808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 121075 - 121010
Alignment:
| Q |
135 |
aagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
121075 |
aagtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgatgtgtaccttgagg |
121010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 379642 - 379714
Alignment:
| Q |
26 |
gagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgc |
98 |
Q |
| |
|
||||||||| || |||||| ||||| | |||||| |||||| ||||||||||| ||||||||| |||||||| |
|
|
| T |
379642 |
gagaatgctccggtgtgactgtaacagcttccggtacggcgacgatgagtcttcgcggtggaacgaaaggtgc |
379714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0380 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0380
Description:
Target: scaffold0380; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 7012 - 6859
Alignment:
| Q |
39 |
tgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaag |
137 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||||||| |||||||| |||| ||| | ||||| | ||| ||| ||||||||||||| |
|
|
| T |
7012 |
tgtgacggtaacggcttccggcacggcgccgatgagtcttcgtggtggaacgaaagatgctggtaggcacgttaggtctctgacgctcaagtca------ |
6919 |
T |
|
| Q |
138 |
tgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6918 |
---gtattgaaactgagaacgagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
6859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 18135895 - 18135958
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacct |
195 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
18135895 |
ctcaagttagtaatggaactgagaaagagtgtgtaagaagtgttgtcaaaagtgatgtatacct |
18135958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 15390737 - 15390584
Alignment:
| Q |
39 |
tgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaag |
137 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||| || |||||| |||| ||||| |||| | ||| ||| ||||||||||| ||| |
|
|
| T |
15390737 |
tgtgacggtaacggcttccggcacggcagcgatgagtcttcgcgatggaacgaaagctgcctattggcacgttagcactttgacgctcaagt-----aag |
15390643 |
T |
|
| Q |
138 |
tgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||| ||||| | | ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15390642 |
tga----tggaactaataaacagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
15390584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 15825178 - 15825246
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
15825178 |
ctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtcatgtgtaccttgagg |
15825246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 19050502 - 19050435
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgag |
199 |
Q |
| |
|
||||||| |||||| ||| | |||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19050502 |
ctcaagtcagtaatagaactaagaaagagagtgtaagaagtgttgtgaaaagtgatgtgtaccctgag |
19050435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 29710962 - 29711108
Alignment:
| Q |
44 |
cggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaagtgagt |
142 |
Q |
| |
|
||||||||| |||| | || ||||||||| ||||| ||||||||||||||||| |||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
29710962 |
cggtaacggcttccagtacagcggcgatgcgtcttcgcggtggaacaaaaggtgtatgcatgcacgttagcactccaacgctcaagtcact--------- |
29711052 |
T |
|
| Q |
143 |
aatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
29711053 |
aatggaattga--aagagagtgtacgaagtgttgtgaaaagtgatgtgtaccttgagg |
29711108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 3586302 - 3586441
Alignment:
| Q |
39 |
tgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaag |
137 |
Q |
| |
|
||||||||| | ||||||||| |||||| || ||||||||| |||||||| |||||||| ||| |||| | ||| ||||||||||||||||| |
|
|
| T |
3586302 |
tgtgacggtgaaggtttccggtacggcgacgttgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagtc------- |
3586394 |
T |
|
| Q |
138 |
tgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||||||||| ||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
3586395 |
--agtaatggaactgagaaaaagtgagtagaaagtgttgtgaaaagtga |
3586441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 24499813 - 24499867
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
24499813 |
ctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtga |
24499867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 29137810 - 29137979
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
||||||||| |||| | ||||||| || | ||||| |||||||| ||||||||||||| ||||||||| | |||||||| |||| || ||||||| | |
|
|
| T |
29137810 |
gagtagcaacggcgacagagaatgttttggtgtgatggtaacggcttccggcacggcgacgatgagtcatcgaggtggaacgaaagatgtctgcaggtac |
29137909 |
T |
|
| Q |
108 |
gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
| ||| || |||||||||||||| | ||||| || |||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
29137910 |
gttagcacaccgacgctcaagtc---------attaatgcaactgagaaagagtgtgtaagaaatgttgtggaaagtga |
29137979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 12168998 - 12169065
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||| |||||||||| | |||||||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
12168998 |
tcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagg |
12169065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 18770338 - 18770393
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgat |
187 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18770338 |
ctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgttgtgaaaagtgat |
18770393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 45714961 - 45715069
Alignment:
| Q |
66 |
ggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaagtgagtaatggaaatgagaaagagtgtg |
164 |
Q |
| |
|
||||||||||||| | |||||||| |||||||| |||||||| | ||| ||||| ||||||||||| ||||||| || |||||||||||||| |
|
|
| T |
45714961 |
ggcgatgagtcttcctggtggaacgaaaggtgcatgcaggcacgttagcactccaacgctcaagtc---------agtaatgaaactgagaaagagtgtg |
45715051 |
T |
|
| Q |
165 |
taagaagtgttgtgaaaa |
182 |
Q |
| |
|
||| |||||| ||||||| |
|
|
| T |
45715052 |
taaaaagtgtggtgaaaa |
45715069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 19919123 - 19919079
Alignment:
| Q |
142 |
taatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
19919123 |
taatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtga |
19919079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 24157373 - 24157305
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| |||||||||| ||||| | | || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
24157373 |
ctcaagtcagtaatggaactgagagataaagtctaagaagtgttgtgaaaagtattgtgtaccttgagg |
24157305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 27846585 - 27846518
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||| |||||||||| ||||||| ||| |||| |||||||||| ||||||| |||||||||||| |
|
|
| T |
27846585 |
tcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgtgtaaagtgaattgtaccttgagg |
27846518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 10923234 - 10923164
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||| ||| |||||| | | |||||||||||| ||||| |||||||||||| |||| |||||||| |
|
|
| T |
10923234 |
cactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaaaagtgaagtgtgccttgagg |
10923164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 36267522 - 36267576
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| ||| |||||||||||||| |
|
|
| T |
36267522 |
ctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttgtgaaaagtga |
36267576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 18772296 - 18772340
Alignment:
| Q |
156 |
aagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||| ||||||||| |
|
|
| T |
18772296 |
aagagtgtgtagaaagtgttgtgaaaagtgacgtgcaccttgagg |
18772340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 310 - 256
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
310 |
ctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtga |
256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 24576730 - 24576582
Alignment:
| Q |
44 |
cggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtcactcaagtgagt |
142 |
Q |
| |
|
||||||||| ||| || ||| |||||||||| || | | ||||||| ||||||||||||||||| | || |||| ||||||||||||| || |
|
|
| T |
24576730 |
cggtaacggcttctggtacgtcggcgatgagactctgcagtggaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtca---------gt |
24576640 |
T |
|
| Q |
143 |
aatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| | | || ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24576639 |
aatggaactaaaaatgagtgtgtaagaagtgttgtgaaaagtaatgtgtaccttgagg |
24576582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 6928159 - 6928103
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
6928159 |
cactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga |
6928103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 11776299 - 11776242
Alignment:
| Q |
143 |
aatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||||||||| |||| ||||||| |||||||||| |||||||||||| |
|
|
| T |
11776299 |
aatggaactgagaaagagtgtttaaggagtgttgggaaaagtgatatgtaccttgagg |
11776242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 23243835 - 23243876
Alignment:
| Q |
159 |
agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23243835 |
agtgtgtaagaagtgttgtgaaaagtgatgtgtatcttgagg |
23243876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 26916965 - 26916911
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| ||||| |||||||||| |||||||||||||||||| |
|
|
| T |
26916965 |
ctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtgaaaagtga |
26916911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 13765014 - 13765067
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| |||||||||| ||||||| |
|
|
| T |
13765014 |
tcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtga |
13765067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 24507482 - 24507535
Alignment:
| Q |
133 |
tcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||||| | |||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
24507482 |
tcaagtcaataatggaaatgagaaagagtgtctagaaagtgttgtgaaaagtga |
24507535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 17698350 - 17698298
Alignment:
| Q |
134 |
caagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||| |||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
17698350 |
caagtcagtaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtga |
17698298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 4565427 - 4565392
Alignment:
| Q |
165 |
taagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4565427 |
taagaagtgttgtgaaaagtgttgtgtaccttgagg |
4565392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 14666949 - 14666898
Alignment:
| Q |
81 |
cggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtca |
131 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| ||||||||| |||||||| |
|
|
| T |
14666949 |
cggtggaacaaaaggtgcctgcaggcacgttagcactccgacgatcaagtca |
14666898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 20055488 - 20055603
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcctgcaggca- |
107 |
Q |
| |
|
|||| |||| || ||| ||||||||| ||||| | ||||||| |||||| ||||||||||||| |||| ||||||||| || |||| ||||||||| |
|
|
| T |
20055488 |
gagtcgcaacggtggcagagaatgctccgatgaatcagtaacggcttccggtacggcggcgatgaatcttcgcggtggaacgaagggtgtctgcaggcac |
20055587 |
T |
|
| Q |
108 |
gctagaactccgacgc |
123 |
Q |
| |
|
| ||| |||||||||| |
|
|
| T |
20055588 |
gttagtactccgacgc |
20055603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 13754782 - 13754836
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| |||||||||| ||||||| |
|
|
| T |
13754782 |
ctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtga |
13754836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 21416762 - 21416812
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaa |
182 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| |||||||||||||| |
|
|
| T |
21416762 |
ctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaa |
21416812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 30477665 - 30477719
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||| | || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
30477665 |
ctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtga |
30477719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 196
Target Start/End: Original strand, 20055623 - 20055652
Alignment:
| Q |
167 |
agaagtgttgtgaaaagtgatgtgtacctt |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
20055623 |
agaagtgttgtgaaaagtgatgtgtacctt |
20055652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 3459551 - 3459479
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgtt-gtgaaaagtgatgtgtaccttgaggtga |
203 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||| ||||||| ||||||||| | |||||||||||||| |
|
|
| T |
3459551 |
ctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttggtgaaaagtaaatcgtaccttgaggtga |
3459479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 24070874 - 24070930
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
|||| |||| |||||||||| | |||||||||||||| ||||||||||| |||||| |
|
|
| T |
24070874 |
cacttaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgagaagtga |
24070930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 24677654 - 24677590
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtacctt |
196 |
Q |
| |
|
||||||| |||| ||||| ||||| ||| ||||||||||||||||| |||| |||| ||||||| |
|
|
| T |
24677654 |
ctcaagtcagtattggaactgagagagaaagtgtaagaagtgttgtggaaagggatgcgtacctt |
24677590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 215296 - 215364
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||||||| || ||| | ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
215296 |
ctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtaccttgagg |
215364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 21687 - 21617
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||||| |||| || || ||| | ||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21687 |
cactcaagtcagtattgaaactgaaagagagtgtttaagaagtgttgtggaaagtgatgtgtaccttgagg |
21617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 40820 - 40888
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| ||| |||||| ||| | |||| ||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
40820 |
ctcaagtcagtgatggaactgaaagagagagtgtaggaagtgttatgaaaagtgatgtgtaccttgagg |
40888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0479 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0479
Description:
Target: scaffold0479; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 4949 - 5040
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcct |
100 |
Q |
| |
|
||||||||| |||||| ||||||| | || |||||| |||| || ||||||||||| ||||| ||||||| |||||||| |||||||||| |
|
|
| T |
4949 |
gagtagcaacggcggcagagaatgttccggtgtgacagtaaaggcttccggcacggtggcgaagagtcttcgaggtggaacgaaaggtgcct |
5040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0479; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 5081 - 5130
Alignment:
| Q |
151 |
tgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
5081 |
tgagaaaggttgtgtaagaagtgttgtgaaaagtgacgtgaaccttgagg |
5130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 6322 - 6389
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgag |
199 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
6322 |
ctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcgtaccttgag |
6389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 95877 - 95823
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| |
|
|
| T |
95877 |
ctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaagtga |
95823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0263
Description:
Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 20564 - 20499
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttg |
197 |
Q |
| |
|
||||||| | ||| |||| |||||||||||||||| || |||| ||||||||||||||||||||| |
|
|
| T |
20564 |
ctcaagtcactaaaggaactgagaaagagtgtgtagaaaatgttatgaaaagtgatgtgtaccttg |
20499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 4491 - 4423
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
||||||| | ||||| || ||| | |||| |||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
4491 |
ctcaagtcactaatgaaactgaaagagagagtgtaagaagtgttatgaaaaatgatgtgtaccttgagg |
4423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0464 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0464
Description:
Target: scaffold0464; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 11425 - 11516
Alignment:
| Q |
9 |
gagtagcaaaggcggctgagaatgcttcgatgtgacggtaacggtttccggcacggcggcgatgagtctttccggtggaacaaaaggtgcct |
100 |
Q |
| |
|
||||||||| ||||| ||||||| ||| ||||||||||| || ||| ||||||||||||| ||||||| |||||||| || ||||||| |
|
|
| T |
11425 |
gagtagcaacagcggcagagaatgtttctgtgtgacggtaaaggcttctggcacggcggcgaagagtcttcaaggtggaacgaatggtgcct |
11516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0464; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 11550 - 11604
Alignment:
| Q |
142 |
taatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
11550 |
taatggaactgagaaagagtgtataag---tgttgtgaaaagtgatgtg-accttgagg |
11604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0505 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0505
Description:
Target: scaffold0505; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 7917 - 7963
Alignment:
| Q |
140 |
agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
7917 |
agtaatgcaattgagaaagagtgtgtagaaagtgttgtgaaaagtga |
7963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0360 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0360
Description:
Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 13946 - 14000
Alignment:
| Q |
132 |
ctcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtga |
186 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| ||||||||||| |||||| |
|
|
| T |
13946 |
ctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtga |
14000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 69333 - 69283
Alignment:
| Q |
82 |
ggtggaacaaaaggtgcctgcaggca-gctagaactccgacgctcaagtca |
131 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| ||||| |||||||||||| |
|
|
| T |
69333 |
ggtggaacaaaaggtgcctgcaggcacgttagcactccaacgctcaagtca |
69283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0518 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0518
Description:
Target: scaffold0518; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 9029 - 9066
Alignment:
| Q |
163 |
tgtaagaagtgttgtgaaaagtgatgtgtaccttgagg |
200 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
9029 |
tgtaagaagtgttgtgaaaaattatgtgtaccttgagg |
9066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 35275 - 35327
Alignment:
| Q |
130 |
cactcaagtgagtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaa |
182 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
35275 |
cactcaagtcagtaacggaactgagaaagagtgtgtggaaagtgttgtgaaaa |
35327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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