View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21397_high_28 (Length: 274)
Name: NF21397_high_28
Description: NF21397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21397_high_28 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 244186 - 244452
Alignment:
| Q |
8 |
cgaagaatatagacgaaagaaagtggccccggagggatgcttttcggtgtacgttggacctcaaatgcaaaggtttgtgatcaaaactgagtatgctaat |
107 |
Q |
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| T |
244186 |
cgaagaaaatagacgaaagaaagtggccccggagggatgcttttcggtgtacgttggacctcaaatgcaaaggtttgtgatcaaaactgagtatgctaat |
244285 |
T |
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| Q |
108 |
catcctttgttcaagatgttgcttgaagaagctgaatcagaatatggttatagctgccaaggacctttggctcttccttgtaatgttgatgtcttttaca |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
244286 |
catcctttgttcaagatgttgcttgaagaagctgaatcagaatatggttatagctgccaaggacctttggctcttccttgtaatgttgatgtcttttaca |
244385 |
T |
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| Q |
208 |
aagtgttgatggaaatggataatgaagctcctctccaaggttgtacttttggtcgttctcgttcttc |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
244386 |
aagtgttgatggaaatggataatgaagctcctctccaaggttgtacttttggtcgttctcgttcttc |
244452 |
T |
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