View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2139_high_18 (Length: 207)
Name: NF2139_high_18
Description: NF2139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2139_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 40991073 - 40990899
Alignment:
| Q |
19 |
agaaattggccgaagaatacaaaggaaaaacacgagtggatcctcatgggaaaaatggaaaaggagatggagatattgtatgtgacaagtgtttgcttga |
118 |
Q |
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| T |
40991073 |
agaaattggccgaagaatacaaaggaaaaacacgagtggatcctcatgggaaaaatggaaaaggagacggagatattgtatgtgacaagtgtttgcttga |
40990974 |
T |
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| Q |
119 |
aggaacactcttgtaagtttctggaattcagctcattgtagattgagtccttttttcaccttataatcctatgct |
193 |
Q |
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| T |
40990973 |
aggaacactcttgtaagtttctggaattcagctcattgtagattgagtccttttttcaccttataatcctatgct |
40990899 |
T |
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