View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2139_low_5 (Length: 417)
Name: NF2139_low_5
Description: NF2139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2139_low_5 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 31702720 - 31702553
Alignment:
| Q |
17 |
agcaacaaggttaagagtttgttttgtaatataacactctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgat |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31702720 |
agcaacaaggttaagagtttgttttttaatataacactctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgat |
31702621 |
T |
 |
| Q |
117 |
ttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgcaataagccattgtgag |
184 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31702620 |
ttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgcaataagccattgtgag |
31702553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 243 - 417
Target Start/End: Complemental strand, 31702493 - 31702319
Alignment:
| Q |
243 |
ggttctggatagttaaacactcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgata |
342 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31702493 |
ggttctggatagttaaacactcactatgtcccaacaattctatctgtgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgata |
31702394 |
T |
 |
| Q |
343 |
tttttggatttaaagtatcatctagtaaaacattacctgttttgaaatctctatggacaatccgcaatcgagaat |
417 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31702393 |
tttttggattcaaagtatcatctagtaaaacattacctgttttgagatctctatggacaatccgcaatcgagaat |
31702319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 245 - 417
Target Start/End: Complemental strand, 31717821 - 31717649
Alignment:
| Q |
245 |
ttctggatagttaaacactcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatt |
344 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31717821 |
ttctggatagttaaacactcactaagtcccaacaattctatttgtgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatt |
31717722 |
T |
 |
| Q |
345 |
tttggatttaaagtatcatctagtaaaacattacctgttttgaaatctctatggacaatccgcaatcgagaat |
417 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
31717721 |
tttggattcaaagtatcatctagtaaaacattgctgcttttgagatctctatggacaatcctcaatcgagaat |
31717649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 245 - 417
Target Start/End: Complemental strand, 31725046 - 31724874
Alignment:
| Q |
245 |
ttctggatagttaaacactcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatt |
344 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31725046 |
ttctggatagttaaacactcactacgtcccaacaattctatttgtgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatt |
31724947 |
T |
 |
| Q |
345 |
tttggatttaaagtatcatctagtaaaacattacctgttttgaaatctctatggacaatccgcaatcgagaat |
417 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||| |
|
|
| T |
31724946 |
tttggattcaaagtatcatctagtaaaacattgctgcttttgaggtctctatggacaatcctcaatcgagaat |
31724874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 31718050 - 31717886
Alignment:
| Q |
17 |
agcaacaaggttaagagtttgttttgtaatataacactctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgat |
116 |
Q |
| |
|
||||||||||||||||||||| |||||| || |||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
31718050 |
agcaacaaggttaagagtttgctttgtacgatgacacactcgatttttcttgccacatataatctctaacagtaaaataccaaagctgaaaacgtcggat |
31717951 |
T |
 |
| Q |
117 |
ttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgcaataagccattgt |
181 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31717950 |
ttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgcaataagccattgt |
31717886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 31725275 - 31725111
Alignment:
| Q |
17 |
agcaacaaggttaagagtttgttttgtaatataacactctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgat |
116 |
Q |
| |
|
||||||||||||||||||||| |||||| || |||| ||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| || ||| |
|
|
| T |
31725275 |
agcaacaaggttaagagtttgctttgtacgatgacacactcgatttttcttcccacatataatctctaacaataaaataccaaagctgaaaacgtcggat |
31725176 |
T |
 |
| Q |
117 |
ttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgcaataagccattgt |
181 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31725175 |
ttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgcaataagacattgt |
31725111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 405
Target Start/End: Complemental strand, 31746103 - 31745959
Alignment:
| Q |
261 |
actcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatttttggatttaaagtat |
360 |
Q |
| |
|
|||||||| ||||||| ||||| |||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||| |
|
|
| T |
31746103 |
actcactaagtcccaattattctttctgtttttcctttgatttggtctcctccaaaagttctagctgttccaaaatctgatatttttggattcaaattat |
31746004 |
T |
 |
| Q |
361 |
catctagtaaaacattacctgttttgaaatctctatggacaatcc |
405 |
Q |
| |
|
| || ||||||||||||| || ||||| ||||||||||| ||||| |
|
|
| T |
31746003 |
cgtcgagtaaaacattacttgctttgagatctctatggataatcc |
31745959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 261 - 405
Target Start/End: Complemental strand, 31733202 - 31733058
Alignment:
| Q |
261 |
actcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatttttggatttaaagtat |
360 |
Q |
| |
|
|||||||| || |||| ||||| | || ||||||||| | ||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||| |
|
|
| T |
31733202 |
actcactaagttccaattattctctttgtgtttccttcgaattggtctcctccaaaagttctagctgttccaaaatctgatatttttggattcaaattat |
31733103 |
T |
 |
| Q |
361 |
catctagtaaaacattacctgttttgaaatctctatggacaatcc |
405 |
Q |
| |
|
| || ||||||||||||| || ||||| ||||||||||| ||||| |
|
|
| T |
31733102 |
cgtcgagtaaaacattacttgctttgagatctctatggataatcc |
31733058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 31708651 - 31708548
Alignment:
| Q |
57 |
ctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgcca |
156 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||| ||||| | |||||||||||| |||| |||||||||||||||| |
|
|
| T |
31708651 |
ctatttttgttcccacatataatctctagtagtaaaacaccaaagctgaaaacatctgatttgattgaaaattgtccaccaatggcatactctggtgcca |
31708552 |
T |
 |
| Q |
157 |
tgta |
160 |
Q |
| |
|
|||| |
|
|
| T |
31708551 |
tgta |
31708548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 417
Target Start/End: Complemental strand, 31708366 - 31708208
Alignment:
| Q |
259 |
acactcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatttttggatttaaagt |
358 |
Q |
| |
|
||||||||||||| ||||| | ||||| || ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||| || || | |
|
|
| T |
31708366 |
acactcactatgttccaactactctatgtgtatttccttcaatctggtctcctccaaaagatctagccattccaaaatctgatatttttgggttcaactt |
31708267 |
T |
 |
| Q |
359 |
atcatctagtaaaacattacctgttttgaaatctctatggacaatccgcaatcgagaat |
417 |
Q |
| |
|
| ||| | |||||||||| || ||||| ||||||||| | ||||| |||||||||| |
|
|
| T |
31708266 |
gtgatccaacaaaacattacttgctttgagatctctatgaataatccttaatcgagaat |
31708208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 31697568 - 31697463
Alignment:
| Q |
55 |
ctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgc |
154 |
Q |
| |
|
|||||||||| ||||| | ||||||||| || ||||||| ||||||||||||||| || ||||| | |||||||| ||||||| |||||||||||| || |
|
|
| T |
31697568 |
ctctatttttgttcccgcatataatctccaatagtaaaacaccaaagctgaaaacgtctgatttgattgaaaattgcccatcaacagcatactctggagc |
31697469 |
T |
 |
| Q |
155 |
catgta |
160 |
Q |
| |
|
|||||| |
|
|
| T |
31697468 |
catgta |
31697463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 31733391 - 31733277
Alignment:
| Q |
55 |
ctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgc |
154 |
Q |
| |
|
|||||||| | || |||| ||||||||| || | |||||| || ||||| ||||| || |||||||| |||||| |||||||| |||||| |||||||| |
|
|
| T |
31733391 |
ctctatttcttttgccacatataatctccaataataaaatgccgaagctaaaaacgtcagatttcaccgaaaataatccatcaacagcatattctggtgc |
31733292 |
T |
 |
| Q |
155 |
catgtacccactgca |
169 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
31733291 |
catgtacccactgca |
31733277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 31740947 - 31740833
Alignment:
| Q |
55 |
ctctatttttcttcccacttataatctctaacagtaaaataccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgc |
154 |
Q |
| |
|
|||||||| | || |||| |||||| ||||||| |||||| |||||||| |||||||| |||||||| ||||| | |||||| ||||||||| ||||| |
|
|
| T |
31740947 |
ctctatttcttttgccacgtataatttctaacaataaaattccaaagctaaaaacatcagatttcaccgaaaacaattcatcaacagcatactcgggtgc |
31740848 |
T |
 |
| Q |
155 |
catgtacccactgca |
169 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
31740847 |
catgtatccactgca |
31740833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 31697275 - 31697182
Alignment:
| Q |
259 |
acactcactatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatttttggatt |
352 |
Q |
| |
|
||||| ||||||| ||||| | ||||| || ||||||||||| |||| ||||||||||| ||| |||| |||||||||||||||||||||||| |
|
|
| T |
31697275 |
acacttactatgttccaactactctatttgtatttccttcaatctggtctcctccaaaagatctggccattccaaaatctgatatttttggatt |
31697182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 417
Target Start/End: Complemental strand, 31740730 - 31740604
Alignment:
| Q |
290 |
gtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatttttggatttaaagtatcatctagtaaaacattacctgttttgaaa |
389 |
Q |
| |
|
||||||||| ||||||| |||||| ||||||||||| |||||||||||||| ||||||||| || | || || || |||||||||| || ||||| |
|
|
| T |
31740730 |
gtttccttcgatttggtctcctccgaaagttctagctgttccaaaatctgata-ttttggattcaagttgtcgtcgagcaaaacattacttgctttgagg |
31740632 |
T |
 |
| Q |
390 |
tctctatggacaatccgcaatcgagaat |
417 |
Q |
| |
|
|||||||||| ||| | |||||||||| |
|
|
| T |
31740631 |
tctctatggataattcttaatcgagaat |
31740604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 31746216 - 31746178
Alignment:
| Q |
131 |
tccatcaatagcatactctggtgccatgtacccactgca |
169 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
31746216 |
tccatcaacagcatactctggtgccatgtacccactgca |
31746178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 23560260 - 23560361
Alignment:
| Q |
69 |
ccacttataatctctaacagtaaaataccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgc |
168 |
Q |
| |
|
|||| ||||||||| | || ||||| ||||| ||||| ||||| |||||||| ||||| ||||||| |||||| |||||||||||||| ||||||| |
|
|
| T |
23560260 |
ccacatataatctccagcatcaaaattccaaaactgaatacatcagatttcacagaaaaaagtccatccgcagcatattctggtgccatgtagccactgc |
23560359 |
T |
 |
| Q |
169 |
aa |
170 |
Q |
| |
|
|| |
|
|
| T |
23560360 |
aa |
23560361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 15697123 - 15697187
Alignment:
| Q |
96 |
ccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgta |
160 |
Q |
| |
|
||||||||||||||||| |||||||| |||||| |||| | |||||||| ||||| |||||||| |
|
|
| T |
15697123 |
ccaaagctgaaaacatcggatttcactgaaaataatccagccatagcatattctggagccatgta |
15697187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 15799843 - 15799882
Alignment:
| Q |
313 |
caaaagttctagccaatccaaaatctgatatttttggatt |
352 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15799843 |
caaatgttcttgccaatccaaaatctgatatttttggatt |
15799882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 352
Target Start/End: Original strand, 15703721 - 15703754
Alignment:
| Q |
319 |
ttctagccaatccaaaatctgatatttttggatt |
352 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
15703721 |
ttcttgccaatccaaaatctgatatttttggatt |
15703754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 47771301 - 47771228
Alignment:
| Q |
96 |
ccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgca |
169 |
Q |
| |
|
|||||||| || ||||||||||| || ||||||||||||| || |||||||| ||||||||||| || ||||| |
|
|
| T |
47771301 |
ccaaagctaaagacatccgattttaccgaaaattgtccatgcattgcatactcaggtgccatgtatccgctgca |
47771228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 21936710 - 21936640
Alignment:
| Q |
99 |
aagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgca |
169 |
Q |
| |
|
||||| |||||||| || ||||| ||||| |||||||||| ||||||||||| | |||||| |||||||| |
|
|
| T |
21936710 |
aagctaaaaacatcggacttcactgaaaaatgtccatcaagggcatactctggagacatgtaaccactgca |
21936640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 47775387 - 47775326
Alignment:
| Q |
108 |
acatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactgca |
169 |
Q |
| |
|
||||||||||| || ||||||||||||| || |||||||| |||||||| || |||||||| |
|
|
| T |
47775387 |
acatccgattttaccgaaaattgtccatgcattgcatactcaggtgccatatatccactgca |
47775326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 3080739 - 3080668
Alignment:
| Q |
96 |
ccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactg |
167 |
Q |
| |
|
||||||||||||||||| |||||||| ||| || || || ||||| ||||||||||||||||| |||||| |
|
|
| T |
3080739 |
ccaaagctgaaaacatcagatttcacagaatataacccttccatagcgtactctggtgccatgtatccactg |
3080668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 3095176 - 3095105
Alignment:
| Q |
96 |
ccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactg |
167 |
Q |
| |
|
||||||||||||||||| |||||||| ||| || || || ||||| ||||||||||||||||| |||||| |
|
|
| T |
3095176 |
ccaaagctgaaaacatcagatttcacagaatataacccttccatagcgtactctggtgccatgtatccactg |
3095105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 34329024 - 34328911
Alignment:
| Q |
265 |
actatgtcccaacaattctatctgcgtttccttcaatttggtttcctccaaaagttctagccaatccaaaatctgatatttttggatttaaagtatcatc |
364 |
Q |
| |
|
||||||||||||| ||||| || ||||||||| |||| | |||||| ||| ||||||||| || |||||||| ||||| |||||||| | ||| |
|
|
| T |
34329024 |
actatgtcccaactattctccttgtgtttccttccttttgatctcctccgaaaattctagccatgccgaaatctgaaattttaggatttaattcctgatc |
34328925 |
T |
 |
| Q |
365 |
tagtaaaacattac |
378 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
34328924 |
tagtaaaacattac |
34328911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University