View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21402_high_6 (Length: 243)
Name: NF21402_high_6
Description: NF21402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21402_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 31181759 - 31181980
Alignment:
| Q |
1 |
tcggtttccccactgagttcccctacgagtttgaatcgttaactgactcaacagaaaacagtagcgacgaagaagaaagtttctttgctgggttaactca |
100 |
Q |
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| T |
31181759 |
tcggtttccccactgagttcccctacgagtttgaatcgttaactgactcaacagaaaacagtagcgacgaagaagaaagtttctttgctgggttaactca |
31181858 |
T |
|
| Q |
101 |
aagactgagtcaaaccactctccgtgaaactcagaagcagcatgaattcatcacagcacctaccatgaaagctcgtgacgtggcagggtcacctcagtcg |
200 |
Q |
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|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31181859 |
aagactgagtcaaaccaccctccgtgaaactcaga---agcatgaattcatcacagcacctaccatgaaagctcgtgacgtggcagggtcacctcagtcg |
31181955 |
T |
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| Q |
201 |
actctgagtggaatcggtagctggt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
31181956 |
actctgagtggaatcggtagctggt |
31181980 |
T |
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