View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21405_high_6 (Length: 332)
Name: NF21405_high_6
Description: NF21405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21405_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 7 - 318
Target Start/End: Complemental strand, 32753064 - 32752753
Alignment:
| Q |
7 |
atactatgtacattacttccaaaacattatatttcactttgcatatataatggttgggaacacactagtcgataagattgatttagtatttgtgtcatgt |
106 |
Q |
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| T |
32753064 |
atactatgtacgttacttccaaaacattatatttcactttgcatatataatggttgggaacacactagtcgataagattgatttagtatttgtgtcatgt |
32752965 |
T |
|
| Q |
107 |
cttttgacaactttattgcatgtgtgcaaaaacagatggagcaatacactaacatttgtctatccaaagtaaacatacctggcaaacttgatgtagaagc |
206 |
Q |
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| T |
32752964 |
cttttgacaactttattgcatgtgtgcaaaaacagatggagcaatacactaacatttgtctatccaaagtaaacatacctggcaaacttgatgtagaagc |
32752865 |
T |
|
| Q |
207 |
tgagtgtatgttaaagtagcatcaacaccaagttcattcccttcccaataaaaggccactttgtcacctagtccagcttcaacatttctatccaaacaat |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32752864 |
tgagtgtatgttaaagtagcatcaacaccaagttcattcccttcccaataaaaggccactttgtcacctagtccagcttcaacatttctatccaaacaat |
32752765 |
T |
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| Q |
307 |
tataacaaatgt |
318 |
Q |
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|||||||||||| |
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| T |
32752764 |
tataacaaatgt |
32752753 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 35827649 - 35827596
Alignment:
| Q |
20 |
tacttccaaaacattatatttcactttgcatatataatggttgggaacacacta |
73 |
Q |
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|||| |||||||||||||||||||||||||| ||| ||||| || | ||||||| |
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| T |
35827649 |
tactcccaaaacattatatttcactttgcatttatgatggtgggaagcacacta |
35827596 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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