View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21406_low_28 (Length: 290)

Name: NF21406_low_28
Description: NF21406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21406_low_28
NF21406_low_28
[»] chr3 (47 HSPs)
chr3 (7-253)||(5499401-5499649)
chr3 (11-91)||(10499107-10499187)
chr3 (9-89)||(17108894-17108974)
chr3 (8-88)||(47454612-47454692)
chr3 (18-89)||(2597225-2597296)
chr3 (11-82)||(4844509-4844580)
chr3 (11-82)||(4870205-4870276)
chr3 (11-90)||(36720380-36720459)
chr3 (7-81)||(11612307-11612381)
chr3 (7-89)||(31510712-31510794)
chr3 (249-290)||(1658619-1658660)
chr3 (10-86)||(17034991-17035065)
chr3 (19-92)||(31520611-31520684)
chr3 (7-91)||(36797685-36797769)
chr3 (11-86)||(13808883-13808958)
chr3 (11-90)||(19154630-19154709)
chr3 (11-90)||(30311305-30311384)
chr3 (11-86)||(53412948-53413023)
chr3 (11-89)||(4222141-4222219)
chr3 (7-81)||(12761520-12761594)
chr3 (11-89)||(14186648-14186725)
chr3 (9-89)||(14339610-14339690)
chr3 (11-51)||(20501734-20501774)
chr3 (25-89)||(47810756-47810820)
chr3 (18-89)||(203090-203161)
chr3 (33-92)||(26988993-26989051)
chr3 (11-82)||(38550402-38550473)
chr3 (27-90)||(46518627-46518690)
chr3 (11-89)||(16354890-16354968)
chr3 (11-89)||(21960551-21960629)
chr3 (11-89)||(28703402-28703480)
chr3 (11-89)||(37051292-37051370)
chr3 (11-89)||(37788463-37788541)
chr3 (11-89)||(40063619-40063697)
chr3 (35-89)||(42430335-42430388)
chr3 (19-92)||(7975415-7975488)
chr3 (33-86)||(28928899-28928952)
chr3 (11-84)||(34928939-34929012)
chr3 (25-90)||(39976443-39976508)
chr3 (7-92)||(40268486-40268570)
chr3 (18-82)||(2667869-2667933)
chr3 (25-89)||(16212984-16213048)
chr3 (19-91)||(27093367-27093439)
chr3 (10-42)||(31587735-31587767)
chr3 (33-89)||(31788990-31789046)
chr3 (58-90)||(34622567-34622599)
chr3 (33-89)||(40286877-40286933)
[»] chr1 (43 HSPs)
chr1 (11-91)||(51814492-51814572)
chr1 (19-92)||(25297769-25297842)
chr1 (7-89)||(19528321-19528403)
chr1 (12-89)||(37400274-37400351)
chr1 (11-85)||(9224779-9224853)
chr1 (10-91)||(29817673-29817754)
chr1 (11-86)||(15786318-15786393)
chr1 (25-92)||(26232398-26232465)
chr1 (12-90)||(40257398-40257476)
chr1 (11-89)||(44961765-44961843)
chr1 (9-89)||(16169974-16170054)
chr1 (11-87)||(33700771-33700847)
chr1 (11-90)||(8904413-8904492)
chr1 (11-82)||(13578715-13578786)
chr1 (11-90)||(36371469-36371548)
chr1 (11-82)||(42983372-42983443)
chr1 (11-89)||(2799862-2799940)
chr1 (27-65)||(2970473-2970511)
chr1 (11-89)||(9165193-9165271)
chr1 (25-91)||(41508829-41508895)
chr1 (26-86)||(24730387-24730447)
chr1 (9-89)||(52116777-52116857)
chr1 (11-90)||(8177180-8177259)
chr1 (19-82)||(47720837-47720900)
chr1 (19-82)||(47727829-47727892)
chr1 (7-89)||(952511-952593)
chr1 (11-89)||(2219972-2220050)
chr1 (11-73)||(12587286-12587348)
chr1 (7-89)||(15581136-15581217)
chr1 (8-82)||(27223125-27223199)
chr1 (34-88)||(44126396-44126450)
chr1 (11-69)||(50919974-50920032)
chr1 (11-89)||(51703779-51703857)
chr1 (8-70)||(52029932-52029994)
chr1 (12-89)||(11438483-11438560)
chr1 (11-52)||(26232359-26232400)
chr1 (11-72)||(28411347-28411408)
chr1 (24-89)||(31794275-31794340)
chr1 (25-89)||(27567134-27567198)
chr1 (19-83)||(32916809-32916871)
chr1 (25-69)||(36124853-36124897)
chr1 (35-91)||(37046983-37047039)
chr1 (18-78)||(52336779-52336839)
[»] chr7 (46 HSPs)
chr7 (7-89)||(22760863-22760945)
chr7 (27-90)||(23595728-23595791)
chr7 (11-92)||(43215181-43215262)
chr7 (9-89)||(48771938-48772018)
chr7 (11-90)||(17041010-17041089)
chr7 (7-90)||(18056769-18056852)
chr7 (7-90)||(38374593-38374676)
chr7 (7-89)||(19553454-19553535)
chr7 (11-89)||(26459408-26459486)
chr7 (33-91)||(26526288-26526346)
chr7 (10-86)||(18884402-18884478)
chr7 (25-89)||(23301614-23301678)
chr7 (11-91)||(25655226-25655306)
chr7 (18-90)||(30579334-30579406)
chr7 (18-89)||(7801180-7801251)
chr7 (11-90)||(23552117-23552196)
chr7 (19-89)||(5273596-5273666)
chr7 (19-89)||(15137553-15137623)
chr7 (19-89)||(18363696-18363766)
chr7 (9-86)||(15905670-15905746)
chr7 (33-82)||(33362639-33362688)
chr7 (33-89)||(25590611-25590667)
chr7 (9-89)||(43590907-43590987)
chr7 (18-90)||(45709713-45709785)
chr7 (9-89)||(48039643-48039723)
chr7 (11-90)||(14058252-14058331)
chr7 (11-90)||(14368280-14368359)
chr7 (18-89)||(24513797-24513868)
chr7 (27-86)||(45976937-45976996)
chr7 (8-90)||(11720955-11721037)
chr7 (11-89)||(20335829-20335907)
chr7 (12-86)||(25241999-25242073)
chr7 (8-54)||(29916803-29916849)
chr7 (11-89)||(30442488-30442566)
chr7 (11-89)||(39631844-39631922)
chr7 (18-84)||(41519269-41519335)
chr7 (7-89)||(48125169-48125250)
chr7 (33-90)||(2446307-2446364)
chr7 (10-83)||(21877814-21877887)
chr7 (9-70)||(25132374-25132435)
chr7 (12-89)||(39499718-39499795)
chr7 (25-89)||(3280497-3280561)
chr7 (33-89)||(25021355-25021411)
chr7 (9-89)||(31835192-31835272)
chr7 (25-89)||(37233584-37233648)
chr7 (11-63)||(42262093-42262145)
[»] chr2 (32 HSPs)
chr2 (7-90)||(37480074-37480157)
chr2 (19-90)||(34041594-34041665)
chr2 (11-89)||(19244109-19244187)
chr2 (8-90)||(39714991-39715073)
chr2 (25-89)||(5147691-5147755)
chr2 (33-89)||(35916086-35916142)
chr2 (7-90)||(21213768-21213851)
chr2 (11-90)||(30808645-30808724)
chr2 (11-89)||(40416388-40416466)
chr2 (11-89)||(42327393-42327471)
chr2 (18-91)||(3001377-3001450)
chr2 (9-90)||(29503270-29503351)
chr2 (25-89)||(12994388-12994452)
chr2 (26-89)||(4438992-4439055)
chr2 (7-86)||(14780509-14780588)
chr2 (18-89)||(18259730-18259801)
chr2 (7-89)||(19016031-19016113)
chr2 (11-77)||(31573639-31573705)
chr2 (19-88)||(16918584-16918653)
chr2 (33-82)||(41202257-41202306)
chr2 (9-89)||(23052519-23052599)
chr2 (11-90)||(4060212-4060291)
chr2 (7-90)||(29197370-29197453)
chr2 (19-90)||(42602553-42602624)
chr2 (27-89)||(16381668-16381730)
chr2 (25-90)||(7918128-7918193)
chr2 (33-90)||(11738064-11738121)
chr2 (33-90)||(41138326-41138383)
chr2 (11-91)||(14500275-14500355)
chr2 (33-89)||(28846691-28846747)
chr2 (11-51)||(33582011-33582051)
chr2 (33-89)||(42860348-42860404)
[»] scaffold0517 (1 HSPs)
scaffold0517 (12-89)||(7725-7802)
[»] scaffold0291 (1 HSPs)
scaffold0291 (8-89)||(2465-2546)
[»] chr8 (24 HSPs)
chr8 (9-90)||(19703483-19703564)
chr8 (11-89)||(23361647-23361725)
chr8 (9-89)||(8059632-8059712)
chr8 (10-90)||(28783059-28783139)
chr8 (11-90)||(35641899-35641978)
chr8 (7-86)||(36205198-36205277)
chr8 (7-92)||(28750568-28750652)
chr8 (7-87)||(2203494-2203574)
chr8 (10-90)||(16852339-16852419)
chr8 (35-91)||(17727448-17727504)
chr8 (30-89)||(26848530-26848589)
chr8 (11-89)||(968362-968440)
chr8 (11-87)||(3624582-3624658)
chr8 (18-90)||(4830486-4830558)
chr8 (34-89)||(20994479-20994534)
chr8 (18-89)||(26688865-26688936)
chr8 (11-89)||(18540298-18540376)
chr8 (11-89)||(29431011-29431089)
chr8 (11-89)||(40872876-40872954)
chr8 (25-90)||(8484998-8485063)
chr8 (249-282)||(45349447-45349480)
chr8 (7-47)||(3524395-3524435)
chr8 (34-90)||(3826798-3826854)
chr8 (42-86)||(25058670-25058714)
[»] chr6 (16 HSPs)
chr6 (11-91)||(33549102-33549182)
chr6 (10-89)||(24641187-24641266)
chr6 (9-83)||(34444809-34444883)
chr6 (12-89)||(30127400-30127477)
chr6 (19-90)||(31622997-31623068)
chr6 (11-84)||(6691549-6691621)
chr6 (9-89)||(14557962-14558042)
chr6 (11-87)||(32613138-32613214)
chr6 (11-70)||(6385881-6385940)
chr6 (27-90)||(12188317-12188380)
chr6 (11-90)||(12234505-12234584)
chr6 (8-90)||(10338169-10338251)
chr6 (19-89)||(14278117-14278186)
chr6 (33-85)||(6776627-6776679)
chr6 (57-89)||(22995155-22995187)
chr6 (57-89)||(23793213-23793245)
[»] chr4 (41 HSPs)
chr4 (9-89)||(47044717-47044797)
chr4 (33-90)||(21660164-21660221)
chr4 (33-90)||(21668928-21668985)
chr4 (12-86)||(25869576-25869650)
chr4 (11-89)||(28635696-28635774)
chr4 (11-89)||(37109349-37109427)
chr4 (12-82)||(43728402-43728472)
chr4 (8-89)||(39509070-39509151)
chr4 (33-89)||(46545711-46545767)
chr4 (18-89)||(14451751-14451821)
chr4 (7-86)||(20281186-20281265)
chr4 (33-92)||(49225450-49225509)
chr4 (11-82)||(49576892-49576963)
chr4 (27-86)||(52254418-52254477)
chr4 (7-89)||(8325373-8325455)
chr4 (7-89)||(19238571-19238653)
chr4 (9-91)||(37720210-37720292)
chr4 (11-85)||(43623442-43623516)
chr4 (8-89)||(5795404-5795485)
chr4 (12-85)||(13901746-13901819)
chr4 (37-90)||(51250546-51250599)
chr4 (18-90)||(24827824-24827896)
chr4 (11-86)||(7292796-7292871)
chr4 (18-89)||(9241030-9241101)
chr4 (25-68)||(51747855-51747898)
chr4 (10-89)||(55427197-55427276)
chr4 (30-89)||(56236932-56236991)
chr4 (11-89)||(1730487-1730565)
chr4 (11-89)||(33619206-33619284)
chr4 (7-89)||(46295097-46295179)
chr4 (11-89)||(51948480-51948558)
chr4 (11-84)||(3743108-3743181)
chr4 (36-89)||(12821968-12822021)
chr4 (12-89)||(31759657-31759734)
chr4 (12-89)||(40285623-40285700)
chr4 (40-89)||(49582206-49582255)
chr4 (9-89)||(20608922-20609002)
chr4 (25-89)||(32714934-32714998)
chr4 (13-69)||(38869788-38869844)
chr4 (38-86)||(51346483-51346531)
chr4 (7-47)||(56440443-56440483)
[»] scaffold0258 (1 HSPs)
scaffold0258 (11-89)||(15321-15399)
[»] scaffold0118 (1 HSPs)
scaffold0118 (11-89)||(41631-41709)
[»] chr5 (25 HSPs)
chr5 (11-89)||(16773807-16773885)
chr5 (33-89)||(14495825-14495881)
chr5 (11-90)||(30883196-30883275)
chr5 (11-90)||(34984805-34984884)
chr5 (19-90)||(40461619-40461690)
chr5 (27-89)||(40281106-40281168)
chr5 (13-90)||(30109308-30109385)
chr5 (31-90)||(24652867-24652926)
chr5 (19-90)||(29692392-29692463)
chr5 (11-90)||(43241680-43241759)
chr5 (7-89)||(16457810-16457892)
chr5 (33-82)||(1410679-1410728)
chr5 (25-89)||(21549149-21549213)
chr5 (254-290)||(24046979-24047015)
chr5 (19-90)||(87429-87500)
chr5 (18-89)||(6844729-6844800)
chr5 (35-90)||(26598523-26598578)
chr5 (33-96)||(30735090-30735153)
chr5 (11-89)||(25627057-25627135)
chr5 (11-69)||(43442216-43442274)
chr5 (11-89)||(43230772-43230852)
chr5 (33-89)||(8278295-8278351)
chr5 (33-89)||(19949636-19949691)
chr5 (33-89)||(29075781-29075837)
chr5 (33-89)||(41797832-41797888)
[»] scaffold0006 (1 HSPs)
scaffold0006 (11-82)||(163007-163078)
[»] scaffold0194 (1 HSPs)
scaffold0194 (11-85)||(13044-13118)
[»] scaffold0299 (1 HSPs)
scaffold0299 (11-83)||(11534-11606)
[»] scaffold0361 (1 HSPs)
scaffold0361 (35-89)||(5233-5287)
[»] scaffold0032 (1 HSPs)
scaffold0032 (11-89)||(112282-112360)
[»] scaffold0187 (2 HSPs)
scaffold0187 (33-89)||(12442-12498)
scaffold0187 (33-89)||(22770-22826)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-86)||(94976-95044)


Alignment Details
Target: chr3 (Bit Score: 176; Significance: 7e-95; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 7 - 253
Target Start/End: Original strand, 5499401 - 5499649
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttttcttgaaccagttaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5499401 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtttttcttgaaccagttaa 5499500  T
Q  107 gtttgacatccaaaactgtttggtaattgtgactcttttgctatggcagtagtacttacagctttcaa--nnnnnnnnnnccttcagaaaaagacaacaa 204  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||              |||| |||||||||||||    
T  5499501 gttcgacatccaaaactgtttggtaattatgactcttttgctatggcagtagtacttagagctttcaattttattttattttttcaaaaaaagacaacaa 5499600  T
Q  205 agccaaaggttgtgaagaaattgaaccttaagaaggtgagagaagtgat 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5499601 agccaaaggttgtgaagaaattgaaccttaagaaggtgagagaagtgat 5499649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 10499107 - 10499187
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||| |||||| |||||| ||||| ||||| |||| ||||||  ||| |||||||||||| ||||||||||||||||||    
T  10499107 gagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtttt 10499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 17108894 - 17108974
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||  ||||| ||||||| ||||||||||||||| || ||||  |||||||||||||| || ||||||||||||||    
T  17108894 gggagaatcaaacctgagaccttgaggaggagcacactcccacatctccagtcaataccaccaaactaacccaagtgggtt 17108974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 47454612 - 47454692
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggt 88  Q
    ||||||||| |||||| ||||||  |||||||||||||||  |||||| ||| ||||||||| ||| ||||||||||||||    
T  47454612 ggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 2597225 - 2597296
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||||||||||||  | |||  ||| |||||||||||||||||||||||||||||    
T  2597225 gaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 4844509 - 4844580
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| || ||| ||||||  ||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  4844509 gagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 4870205 - 4870276
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| || ||| ||||||  ||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  4870205 gagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 36720459 - 36720380
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| | ||||  ||||||||||||||| || |||  ||| ||||||||||||||||||||||||||||||    
T  36720459 gagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11612381 - 11612307
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaaccca 81  Q
    ||||||| || |||||| ||||||||||||||||||||||| ||| ||  |||| ||||||||||| ||||||||    
T  11612381 cggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 31510712 - 31510794
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||| ||||||| || ||||||||| |||| ||  ||  ||||||||||||||||||||||| |||||||||    
T  31510712 cggggagaatcgaactttagaccgtatggaggagcatactcccaagtcccaagtcaataccaccagaccaacctaagtgggtt 31510794  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 1658619 - 1658660
Alignment:
Q  249 gtgatggtggtcgaaggtgtgcgacggtggaaaagtggttct 290  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  1658619 gtgacggtggtcgaaggtgtgcgacggtggaaaagtggttct 1658660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 17035065 - 17034991
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||| |||||| ||||||| |||| ||||||  |||||||||  ||||||||||||||||| ||||||||||||    
T  17035065 ggagaatcgaacctgagaccttgaggatgagcac--tctcagatcccaagtcaataccaccagagcaacccaagtgg 17034991  T

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Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 31520611 - 31520684
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    ||||| ||||||  ||||||||||||||| ||||||  ||| |||| ||||||| |||||||||||||||||||    
T  31520611 aacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttttt 31520684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 36797769 - 36797685
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||||||| ||| || | || | ||||||||||||||||||| || | ||||||||| || |||||||||||||||| |||||    
T  36797769 cggggagaatcgaatctaaaacttcaaggaggagcacactctcatatttcaagtcaatatcatcagaccaacccaagtgagtttt 36797685  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 13808883 - 13808958
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||| |||||| ||||||  ||||||||||||||  ||||||  |||||||||  |||||||||||||||||||    
T  13808883 gagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 19154709 - 19154630
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| |||||||||||||||||||  || ||| |||||| || || ||||||||| |||||||    
T  19154709 gagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaaatgggttt 19154630  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 30311384 - 30311305
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| ||||||||||||||| ||||||  ||| | ||||||| || |||||||| ||||||||    
T  30311384 gagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 53413023 - 53412948
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |   ||| ||||||||| ||||||||||||||||    
T  53413023 gagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 4222219 - 4222141
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||| || ||||||||||||||| ||||||  ||| ||||||||| |  ||||||||||||||||    
T  4222219 gagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 12761594 - 12761520
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaaccca 81  Q
    |||||| ||| |||||| ||| || |||||||| ||||||| ||| ||  |||||||||||||||||||||||||    
T  12761594 cggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 14186725 - 14186648
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  14186725 gagaatcgaacctgagaccttgaggaggagcacactc-caggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 14339690 - 14339610
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| |||| || ||||||||||||||| || |||  ||| |||||||||||| |||| |||| ||||||    
T  14339690 gggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 20501774 - 20501734
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcag 51  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  20501774 gagaatcgaacctgagaccttaaggaggagcacactctcag 20501734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 47810756 - 47810820
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||  |||||||||||||| ||   | |||| |||||||||||||||||||||||||||||    
T  47810756 agaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 203161 - 203090
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| | ||||||||||  ||||||||| | ||||  ||||||||||||| || ||||||||||||||||    
T  203161 gaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 26989051 - 26988993
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    |||||||||| ||||||||||| || | ||||||||| || |||||||||||||||||||    
T  26989051 aggaggagcaaactctcagatccaa-gccaataccactaggccaacccaagtgggttttt 26988993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 38550402 - 38550473
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| |||||| |||||| |||||||||||||||| || | |  |||||||||||| ||| |||||||||    
T  38550402 gagaattgaacctcagacctcaaggaggagcacactcccaaaccctaagtcaataccaacaggccaacccaa 38550473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 46518690 - 46518627
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||||||||||| ||||||  ||| ||||||||| |  |||||||||||||||||    
T  46518690 accttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 16354890 - 16354968
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||| | ||||||||||||||| ||| |   ||| ||||||||| || ||||||||||||||||    
T  16354890 gagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21960629 - 21960551
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||| || ||||||  ||||||||||||||||||| ||  ||| ||||||||||||  |||||||| ||||||    
T  21960629 gagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 28703402 - 28703480
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| | ||||||||||||| ||||||  |||  |||| |||  ||||||||||||||||||    
T  28703402 gagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 37051292 - 37051370
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||| |||||||||| ||||||| ||||||  || |||||| ||| | | |||||||||||||||    
T  37051292 gagaatcgaacctgagactttaaggaggaacacactcccagatcccaaatcaatatcactaaatcaacccaagtgggtt 37051370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 37788463 - 37788541
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| |||||||||||||||  || |   |||||||||||||  | ||||||||||||||||    
T  37788463 gagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 40063697 - 40063619
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||| | |||||||||||||||||| |||||||||||  ||| |||||| || |   |||||||||||||||    
T  40063697 gagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 42430388 - 42430335
Alignment:
Q  35 gaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||  |||||  |||||||||||||||| ||||||||||||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccaccag-ccaacccaagtgggtt 42430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 7975488 - 7975415
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    ||||| ||||||| ||||||||||||||| ||||||  ||| | ||||||| || |||||| || |||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttttt 7975415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 28928899 - 28928952
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||||||||||||||||||  ||| ||||||||| || |||| ||||||||    
T  28928899 aggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 34928939 - 34929012
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagt 84  Q
    |||||| ||| || |||||||||||||||||| |||||||| ||  ||||| ||| ||| ||| ||||||||||    
T  34928939 gagaatcgaatctgagaccttaaggaggagcatactctcaggtcctaagtccatatcactagatcaacccaagt 34929012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 39976443 - 39976508
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||| || |||||||||||||||  ||  ||||||||||||||  ||||||| ||||||||||    
T  39976443 agaccttgagaaggagcacactctcaagtcccaagtcaataccaccgaaccaacctaagtgggttt 39976508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 40268570 - 40268486
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    |||||||||| |||||| |||||||||| |||||| |||||  || ||  ||| ||| |||||||| | |||||||||||||||||    
T  40268570 cggggagaatcgaacctgagaccttaag-aggagcccactccaaggtcccaagccaacaccaccaggcaaacccaagtgggttttt 40268486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 2667933 - 2667869
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| ||||||  |||| |||||||||| ||||||  ||| |||||||||||| |||||||||    
T  2667933 gaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16212984 - 16213048
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||||| ||  ||| ||| ||| | ||  |||||||||||||||||||    
T  16212984 agaccttaaggaggagcacactcccaagtctcaaggcaacatcattagaccaacccaagtgggtt 16213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 27093367 - 27093439
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    ||||| ||||||| ||||||||||||||| ||  |   ||| ||||||||| || ||||||||||||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtttt 27093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 31587767 - 31587735
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagca 42  Q
    ||||||| |||||||||||||||||||||||||    
T  31587767 ggagaatcgaaccttagaccttaaggaggagca 31587735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 31788990 - 31789046
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||||||  ||| ||||| ||| || ||||||||||||||||    
T  31788990 aggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 34622567 - 34622599
Alignment:
Q  58 agtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||||||| ||||||||||||||||||||    
T  34622567 agtcaataccactagaccaacccaagtgggttt 34622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 40286877 - 40286933
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| |||||||  |||||| |||  || |||||||||||||||||||||||||    
T  40286877 aggaggaccacactccaagatctcaagcgaacaccaccagaccaacccaagtgggtt 40286933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 51814572 - 51814492
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  51814572 gagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtttt 51814492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 25297842 - 25297769
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    ||||| ||||||  ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  25297842 aacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttttt 25297769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 19528321 - 19528403
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| ||||||| |||||||||||||||  |||||  ||| |||||||||||| ||||||||||||||||    
T  19528321 cggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 37400351 - 37400274
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||| | |||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||| ||||    
T  37400351 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 9224853 - 9224779
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtg 85  Q
    |||||| |||||| |||||| |||||| |||| |||||||||||| ||  |||||||||||||||||||||||||    
T  9224853 gagaatcgaacctgagacctcaaggagaagcatactctcagatctcaaagcaataccaccagaccaacccaagtg 9224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 29817754 - 29817673
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    ||||| |||||||| ||| ||| | ||||||||||||||||| ||| ||||||||| |||||| |||||||||||| |||||    
T  29817754 ggagattagaacctgagaacttgaagaggagcacactctcaggtctcaagtcaatatcaccaggccaacccaagtgagtttt 29817673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 15786318 - 15786393
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||| |||||| ||||||| ||||||||||||||| ||||||  ||| |||||| || ||||||||||||||||    
T  15786318 gagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 26232398 - 26232465
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    |||||| ||| |||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||    
T  26232398 agacctcaagcaggagcacactcccagatctcaagccaataccactagaccaacccaagtggattttt 26232465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 40257476 - 40257398
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| |||| | ||||||  ||||||||||||||| ||| ||| ||| |||||||||||| |||||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 44961843 - 44961765
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||| | |||||||||||||||| | |||| |||  ||||||||| ||||||||||||||||||    
T  44961843 gagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgaccaacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 16169974 - 16170054
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| | ||||| ||||||| ||||||| ||| ||  |||||||||||||||| | ||||||||||||||    
T  16169974 gggagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 33700771 - 33700847
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtggg 87  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||   ||| ||||||||| || ||||||||||||||    
T  33700771 gagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 8904492 - 8904413
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||  |||||||||| || || |||||||||||||||||    
T  8904492 gagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 13578715 - 13578786
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| |||||| |||  ||||||||||||||||||||||| |  ||||||| ||||| ||||||||||||    
T  13578715 gagaatcgaacctcagattttaaggaggagcacactctcagaccctaagtcaaaaccactagaccaacccaa 13578786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 36371548 - 36371469
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |   ||| ||||||||| || |||||||||||||||||    
T  36371548 gagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 42983372 - 42983443
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| ||||||  ||||| |||||||| ||||||| ||||||| |||||||||||||||  |||||||||    
T  42983372 gagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgccaacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 2799940 - 2799862
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| ||||||| ||| | ||||||| || |||| | |||||||||    
T  2799940 gagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 2970511 - 2970473
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaata 65  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  2970511 accttaagaaggagcacactctcagatctaaagtcaata 2970473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 9165193 - 9165271
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||| || ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  9165193 gagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 41508895 - 41508829
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    ||||||| ||||||||||||||| ||||||  ||  || ||||||||| ||||||||||||||||||    
T  41508895 agaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtttt 41508829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 24730447 - 24730387
Alignment:
Q  26 gaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||| | ||||||||||||| ||||||| ||| ||||||||| || |||||||||||||    
T  24730447 gaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 52116777 - 52116857
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| |||| || ||||||||||||||| ||  ||  ||| |||||||||||| ||||||||| ||||||    
T  52116777 gggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 8177180 - 8177259
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| | ||||| ||||||||||||||| ||||||  ||| ||||||||| || ||||| ||| |||||||    
T  8177180 gagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 47720900 - 47720837
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    ||||| |||| || |||||||||||||||  | |||| ||||||||||||||||| ||||||||    
T  47720900 aacctgagactttgaggaggagcacactcctatatctcaagtcaataccaccagatcaacccaa 47720837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 47727892 - 47727829
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    ||||| |||| || |||||||||||||||  | |||| ||||||||||||||||| ||||||||    
T  47727892 aacctgagactttgaggaggagcacactcctatatctcaagtcaataccaccagatcaacccaa 47727829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 952593 - 952511
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||  ||||| |||| || |||| |||||||||| ||| ||  ||| ||| |||||||||||||| ||||||||||    
T  952593 cggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 2220050 - 2219972
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  ||||| |||||||| |||| |   ||| ||||||||||||| |||||||||||||||    
T  2220050 gagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaacaacccaagtgggtt 2219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 12587348 - 12587286
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccaga 73  Q
    |||||| |||||| ||||||  ||||||||||||||| ||||||  ||||||||| |||||||    
T  12587348 gagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcaccaga 12587286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 15581136 - 15581217
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| ||||||| || ||||||||||||  || ||  ||| ||| |||||||| ||||||||||||||||    
T  15581136 cggggagaattgaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 27223125 - 27223199
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    ||||||||| |||||| ||||||| | || |||||||||| ||||||  |||||||||||| || || |||||||    
T  27223125 ggggagaatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaataccatcaaacaaacccaa 27223199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 44126450 - 44126396
Alignment:
Q  34 ggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggt 88  Q
    |||||||||||||| ||| ||  | |||||||||||||| |||||||||||||||    
T  44126450 ggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 50920032 - 50919974
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccac 69  Q
    |||||| |||||| | |||||||||| |||||||||||||| | | |||||||||||||    
T  50920032 gagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaataccac 50919974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 51703857 - 51703779
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| | || || ||||||||||||||| |||||   ||| ||||||||| |||||||||||| ||||||    
T  51703857 gagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 52029932 - 52029994
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccacc 70  Q
    ||||||||| |||||| ||||||| || ||||||||||||  || ||| ||||||||||||||    
T  52029932 ggggagaatcgaacctgagaccttgagaaggagcacactcctaggtctcaagtcaataccacc 52029994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 11438483 - 11438560
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||| | |||| || ||||||| |||||||| | |||  |||||||||||| ||||||||| ||||||||||    
T  11438483 agaatcgaacatgagactttgaggaggatcacactcttaaatcgcaagtcaataccatcagaccaactcaagtgggtt 11438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 26232359 - 26232400
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcaga 52  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  26232359 gagaattgaacctgagacctcaaggaggagcacactctcaga 26232400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 28411408 - 28411347
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccag 72  Q
    |||||| ||| || |||||| || |||||||||||||||| |||  ||||||||||||||||    
T  28411408 gagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccag 28411347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 31794275 - 31794340
Alignment:
Q  24 tagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| ||||||||||||||| ||  ||  ||| ||||||||| || ||||||||||||||||    
T  31794275 tagaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 27567134 - 27567198
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| | ||||||||||||||||| |   ||||||||| || | ||||||||||||||||||    
T  27567134 agaccttgaagaggagcacactctcaggttccaagtcaatatcatccgaccaacccaagtgggtt 27567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 32916809 - 32916871
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaag 83  Q
    ||||| ||||||| ||||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  32916809 aacctaagaccttgaggaggagcacactc-ca-atccaaagtcaatactactagaccaacccaag 32916871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 36124897 - 36124853
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccac 69  Q
    |||||| |||||||||||||||||||| ||  |||||||||||||    
T  36124897 agacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 37047039 - 37046983
Alignment:
Q  35 gaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||||||||||  || ||  ||| ||| |||||||||||||||||||||||||||    
T  37047039 gaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtttt 37046983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 52336779 - 52336839
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaac 78  Q
    |||||| ||| ||||||||||||||||||| ||||||  ||| ||||||||| || |||||    
T  52336779 gaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 22760945 - 22760863
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||    
T  22760945 cggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 23595791 - 23595728
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| |||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||||    
T  23595791 accttgaggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtgagttt 23595728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 43215262 - 43215181
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    |||||| |||||| ||||||| |||||||||||||||  || ||  ||| ||||||||| ||||||||||||||||||||||    
T  43215262 gagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttttt 43215181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 48772018 - 48771938
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||| ||| |||||| |||||| |||||||||||||||| ||||||  ||| |||||||||||  ||||||||||||||||    
T  48772018 gggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 17041010 - 17041089
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| ||||||||||||||  ||||||  ||| |||| |||| ||||||||||||||||||||    
T  17041010 gagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 18056769 - 18056852
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||||| |||||| ||||||| |||||||||||||||  |   |  |||||||||||||||||| |||||||||||||||    
T  18056769 cggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgggttt 18056852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 38374593 - 38374676
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||||| |||||| ||||||| |||||||||||||||| || ||  ||| ||| |||||||  |||||||||||||||||    
T  38374593 cggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 19553535 - 19553454
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||| ||  ||| |||||||||||| |||||||||| |||||    
T  19553535 cggggagaattgaacctaagaccttgaggaggagcacactcccaggtc-caagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 26459408 - 26459486
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  26459408 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 26526346 - 26526288
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||||||||||||||| |||  ||||||||||||||||||||| |||| ||||||||    
T  26526346 aggaggagcacactctcaaatcctaagtcaataccaccagaccaatccaaatgggtttt 26526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 18884402 - 18884478
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||| |||| | |||||||||| || |||||||||  || || |||||||||||||||| ||||||||||||||    
T  18884402 ggagaatcgaacttgagaccttaagaagaagcacactccgaggtccaaagtcaataccaccaaaccaacccaagtgg 18884478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 23301614 - 23301678
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||||||||||||| ||  ||  |||||||||||||||| ||||||||||||||||    
T  23301614 agacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 25655226 - 25655306
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||| |||||| | ||||| ||||||| ||||||| ||||||  ||||||||||||| | ||||||||| |||||||||    
T  25655226 gagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtttt 25655306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 30579406 - 30579334
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| ||||||| |||||| | |||||| ||| ||| ||| |||||||||||| |||||||||||||||||    
T  30579406 gaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 7801251 - 7801180
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||||||| | ||||||||||||| ||| ||  |||||||||||||||| |||| |||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 23552196 - 23552117
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||| | ||||||| ||||||||||||||| ||| ||  ||||||||| ||| || |||||||||||||||||    
T  23552196 gagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 5273596 - 5273666
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| ||||||| |||||||||||||||| || ||  ||| ||| |||||||| ||||||||||||||||    
T  5273596 aacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 15137623 - 15137553
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| ||||||| |||||||||||||||  | |||  |||||| ||||||||| ||||||||||||||||    
T  15137623 aacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 18363766 - 18363696
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| ||||||| ||||||||||||||| || |||| ||| | ||||||| || ||||||||||||||||    
T  18363766 aacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 15905670 - 15905746
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||||| |||||| |||||| |||||||||||||||| ||| ||  ||| ||||||| |||| |||||||||||||    
T  15905670 gggagaatcgaacctgagacct-aaggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 33362688 - 33362639
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  33362688 aggaggagcacattctcaaatctcaagtcaataccaccataccaacccaa 33362639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 25590667 - 25590611
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||||||| ||| |||||||| |||  |||||||||||||||    
T  25590667 aggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 43590987 - 43590907
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| |||| || ||||||||||||||| ||  ||  ||| |||||||||||| ||||||||| ||||||    
T  43590987 gggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 45709713 - 45709785
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| ||||||  ||||||||||||||||||||||  |||  |||||||| || ||||||||| |||||||    
T  45709713 gaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 48039643 - 48039723
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| |||||||  | ||||||| ||||  |||||  ||| ||| |||||||| ||||||||||||||||    
T  48039643 gggagaatagaacctgagaccttgcgaaggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 14058331 - 14058252
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| |||| |||||||||||||| |   ||| |||||||||||| ||||| |||| ||||||    
T  14058331 gagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttt 14058252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 14368359 - 14368280
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| |||| |||||||||||||| |   ||| |||||||||||| ||||| |||| ||||||    
T  14368359 gagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttt 14368280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24513868 - 24513797
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| || |||||| || |||| ||| ||||||||| || ||||||||||||||||    
T  24513868 gaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 45976937 - 45976996
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||||||||||||||||| ||| ||  ||| ||||||||| || |||||||||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 11720955 - 11721037
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||| ||| || | |||||||||||||||||| || ||| ||  ||| |||||||||||| |||||| |||| |||||    
T  11720955 ggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaagttggttt 11721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 20335829 - 20335907
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  ||||||||||||||| ||  ||  ||| ||||||| | |||||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 25242073 - 25241999
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||| ||| || ||||||  |||||||||| |||||||||||| |||  | |||||||||| ||||||||||||    
T  25242073 agaatcgaatctgagacctcgaggaggagcatactctcagatctcaagatattaccaccagatcaacccaagtgg 25241999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 29916803 - 29916849
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatc 54  Q
    ||||||||| |||||| ||||||| |||||||||||||||| |||||    
T  29916803 ggggagaatcgaacctgagaccttgaggaggagcacactcttagatc 29916849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 30442566 - 30442488
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| |||||||||| |||| ||| ||  ||| |||||||||  | ||||||||||||||||    
T  30442566 gagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 39631922 - 39631844
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| |||||||||  |||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  39631922 gagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 41519269 - 41519335
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagt 84  Q
    |||||| ||||||| |||||||||||||||  | |||  ||||||||||||| || |||||||||||    
T  41519269 gaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 48125169 - 48125250
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||| |||||| |||||||  ||||||||||||||  || ||  ||| ||| |||||||||||||||||||||||||    
T  48125169 cggggaaaattgaacctgagaccttc-ggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 2446364 - 2446307
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||||||||| ||  ||  ||| |||||||| |||||||||||||||||||||    
T  2446364 aggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 21877887 - 21877814
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaag 83  Q
    ||||||| |||| | ||||||||||||||||||| ||| ||| ||  ||||||||||||| || ||||| ||||    
T  21877887 ggagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 25132374 - 25132435
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccacc 70  Q
    |||||||| |||||| |||||||||| ||||||||||||  || ||  ||||||||||||||    
T  25132374 gggagaatcgaacctgagaccttaagaaggagcacactcctaggtcctaagtcaataccacc 25132435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 39499718 - 39499795
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||| | ||||||||| ||||| ||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  39499718 agaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 3280497 - 3280561
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| ||||||||||||||||| | ||  ||| |||||||||||   |||||||||||||||    
T  3280497 agaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggtt 3280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 25021355 - 25021411
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  25021355 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 31835272 - 31835192
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||| ||| |||||| ||||||| |||||||||||||||  ||  |  ||| ||| |||||||| ||||||||||||||||    
T  31835272 gggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 37233584 - 37233648
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||||| || |||  ||| ||||| |||||   |||||||||||||||    
T  37233584 agaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtt 37233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 42262093 - 42262145
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaa 63  Q
    |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||    
T  42262093 gagaattgaatctgagacctttaggaggagcacactctcagatcccaagtcaa 42262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 37480157 - 37480074
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||| ||  ||| |||||||||||| |||||||||||||||||    
T  37480157 cggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 34041594 - 34041665
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||| ||||||||||||||||||||||  ||||||||||||| || |||||||||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 19244187 - 19244109
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||  |||||||||||||||||| ||  ||||||||||||  |||||||||||||||||||    
T  19244187 gagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 39715073 - 39714991
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||| |||||| ||||||  ||||||||||||||| ||| ||  |||||||||||||||  |||||||||||||||||    
T  39715073 ggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 5147691 - 5147755
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| || ||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||    
T  5147691 agaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 35916142 - 35916086
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||    
T  35916142 aggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtgggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 21213851 - 21213768
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||||| |||||| |||||| |||||||| ||||||| ||| ||  ||| ||||||||||||||||||||| | ||||||    
T  21213851 cggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaacccatgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 30808645 - 30808724
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| ||| || ||||||| |||||||||| | |||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  30808645 gagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgggttt 30808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 40416388 - 40416466
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||||||||||||||| |||| ||| |   ||||||||||||| || ||||||||||||||||    
T  40416388 gagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 42327393 - 42327471
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  42327393 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3001450 - 3001377
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||| ||| || ||||||||||||||||  |||||| ||||||||||||| || |||||||||||| |||||    
T  3001450 gaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagtttt 3001377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 29503351 - 29503270
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||| ||  ||  ||||||||| || |||||||||||||||||    
T  29503351 gggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 12994388 - 12994452
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||| |||||||| |||| |||||    
T  12994388 agaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 4438992 - 4439055
Alignment:
Q  26 gaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||||||||||||||||||||||  |||| |||||||  || ||||||||||||||||    
T  4438992 gaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 14780588 - 14780509
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||| || |||||| ||||||| |  ||||||||| ||||| |||| |||||||||| ||| |||||||||||||||    
T  14780588 cggggaggatcgaacctgagaccttgaaaaggagcacattctcaaatctcaagtcaatactaccggaccaacccaagtgg 14780509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 18259801 - 18259730
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||||||  |||||||||||||||||| |||| ||| |||||||||||| ||||| ||| ||||||    
T  18259801 gaacctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 19016113 - 19016031
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||  ||| | ||||||  ||||||||||||||| ||  ||| ||| |||||||| ||||||||||||||||||||    
T  19016113 cggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 31573639 - 31573705
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaa 77  Q
    |||||| |||||| |||| | |||||||||||||||||||||||| ||  ||||| |||||||||||    
T  31573639 gagaatcgaacctgagacatcaaggaggagcacactctcagatctcaaaccaatatcaccagaccaa 31573705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 16918584 - 16918653
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggt 88  Q
    ||||| ||||||| ||||||||||||||| ||||||  ||  ||||||||| || |||||||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 41202306 - 41202257
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||||||| |||| ||||||| | ||||||||||||||||||||||||    
T  41202306 aggaggagcatactcccagatctcaggtcaataccaccagaccaacccaa 41202257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 23052519 - 23052599
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| ||||||| ||||| ||||||||| ||  ||  ||| |||||||||||| |||||| |||||||||    
T  23052519 gggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 4060212 - 4060291
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||| ||| ||||| ||||||||||||| | | ||  ||||||||| || |||||||||||||||||    
T  4060212 gagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgggttt 4060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 29197370 - 29197453
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||| ||||| |||| | |||| | |||||||||||||||| ||  ||  |||||||||||||||  |||||||||||||||||    
T  29197370 cgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 42602624 - 42602553
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||| || |||||||||||| ||| ||  ||| ||||||||| || |||||||||||||||||    
T  42602624 aacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 16381668 - 16381730
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||||||| |||||||||||||  ||| | ||||||| || ||||||||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 7918193 - 7918128
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||||||||| |||||||| || ||| || ||||||||  ||||| ||| |||||||||||    
T  7918193 agaccttaaggaggaacacactctaaggtcttaaatcaataccctcagacaaactcaagtgggttt 7918128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 11738064 - 11738121
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||| |||||||||||||||  |||||||||||| |  ||||| |||||||||||    
T  11738064 aggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggttt 11738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 41138383 - 41138326
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||||||||| |||| |   ||||||| ||||||| ||||||||||||||||||    
T  41138383 aggaggagcacactttcaggttctaagtcaacaccaccataccaacccaagtgggttt 41138326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 14500355 - 14500275
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||| ||| || ||||||  ||||||||||||||| ||||||| |||   ||||||| || |||| |||||||||||||    
T  14500355 gagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtttt 14500275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 28846747 - 28846691
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||| ||  ||||||||||||| ||| ||||| |||||||||    
T  28846747 aggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 33582051 - 33582011
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcag 51  Q
    |||||| |||||| |||||| ||||||||||||||||||||    
T  33582051 gagaatcgaacctgagacctcaaggaggagcacactctcag 33582011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 42860404 - 42860348
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||| ||| ||||||||| |||||| ||||| ||||| ||||    
T  42860404 aggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 7725 - 7802
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||| | |||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||| ||||    
T  7725 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 2465 - 2546
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||| |||||| ||||||| ||||||||||||||| |||||| |||  |||||||||| ||||||||||| ||||||    
T  2465 ggggagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 19703483 - 19703564
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||||| |||||| ||||||| ||||||||||||||||||| ||  ||| ||||||||| || |||||||||||||||||    
T  19703483 gggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 23361647 - 23361725
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| || |||  ||||||||||||||||  |||||||||||||||    
T  23361647 gagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 8059712 - 8059632
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| ||||||| ||||||| |||||||||| ||   |||||||||||| ||| ||||||||||||||||    
T  8059712 gggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 28783139 - 28783059
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||| |||| | ||||||| ||||||||||||||| ||| ||| ||| |||||||||||  |||||||||||||||||    
T  28783139 ggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 35641899 - 35641978
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| |||| |  ||||||||||||||| || |||| ||| | ||||||||||||||||||||||||||||    
T  35641899 gagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttt 35641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 36205277 - 36205198
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||||||| |||| | ||||||| ||||||||||||||| ||||||| ||  ||||| || |||||||||||||||||    
T  36205277 cggggagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 28750652 - 28750568
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    |||||||||| |||||  ||||||||||||||||| ||||| |||||   |||| ||||||||||| ||||||| |||||||||||    
T  28750652 cggggagaatcgaaccgaagaccttaaggaggagcgcactcccagattccaagt-aataccaccaggccaaccccagtgggttttt 28750568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 2203574 - 2203494
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtggg 87  Q
    |||||||||| || ||| ||||||| ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||    
T  2203574 cggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 16852419 - 16852339
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||| |||||| ||||||  ||||||||||||||| ||| ||  ||| ||||||||| || |||||||||||||||||    
T  16852419 ggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 17727448 - 17727504
Alignment:
Q  35 gaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||||||||||| || ||| ||||||| ||||| |||||||||||||||||||||    
T  17727448 gaggagcacactctgaggtctcaagtcaacaccacgagaccaacccaagtgggtttt 17727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 26848530 - 26848589
Alignment:
Q  30 ttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||| ||||||| ||| || | |||||||||||||||||| ||||||||||    
T  26848530 ttaaggaggagcatactctcacatcgaatgccaataccaccagaccaactcaagtgggtt 26848589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 968440 - 968362
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  ||||||||||||||| ||| ||  ||| |||||||||||| ||||| ||||||||||    
T  968440 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 3624658 - 3624582
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtggg 87  Q
    |||||| |||||| ||||||| | ||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||    
T  3624658 gagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 4830558 - 4830486
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| ||||||  ||||||| ||||||||||||||  ||   ||||||||||| |||||||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  34 ggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||| ||| ||  ||||||||||||| || ||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 26688936 - 26688865
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||||||| |||||||||||||||  || ||  ||| ||| |||||||| ||||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 18540376 - 18540298
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||| || |||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  18540376 gagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29431089 - 29431011
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| || ||| |||||||||||||||| ||  ||  ||| ||||||| |||| ||||||||||||||||    
T  29431089 gagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 40872954 - 40872876
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| | ||||| | |||||||||||||| |||||  || |||||| |||||  ||||||||||||||||    
T  40872954 gagaatggaacctaaaaccttgaagaggagcacactctaagatcctaaatcaatatcaccatgccaacccaagtgggtt 40872876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 8485063 - 8484998
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| || ||||||||||||| ||| ||  |||  ||||||||||| |||||||||||||||||    
T  8485063 agacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 45349480 - 45349447
Alignment:
Q  249 gtgatggtggtcgaaggtgtgcgacggtggaaaa 282  Q
    |||| |||||||||||||||||||||||||||||    
T  45349480 gtgacggtggtcgaaggtgtgcgacggtggaaaa 45349447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 3524395 - 3524435
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactc 47  Q
    |||||||||| |||||| ||||||| |||||||||||||||    
T  3524395 cggggagaattgaacctaagaccttgaggaggagcacactc 3524435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 3826798 - 3826854
Alignment:
Q  34 ggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||||||||||| ||   ||| ||||||||| || |||||||||||||||||    
T  3826798 ggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttt 3826854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 25058670 - 25058714
Alignment:
Q  42 acactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||||||| ||  ||||||||||||||||||||| ||||||||    
T  25058670 acactctcaggtcccaagtcaataccaccagaccaaaccaagtgg 25058714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 33549182 - 33549102
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||| |||||| ||||||  ||||||||||||||| ||| ||  ||| |||||||||||||||||||||||||||||||    
T  33549182 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtttt 33549102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 24641187 - 24641266
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| |||||||| ||||  ||||||||||||||| ||||||  |||||||||||||||  ||||||||| ||||||    
T  24641187 ggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 34444883 - 34444809
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaag 83  Q
    |||||||| |||||| |||||||  ||||||||||||||| || ||  |||||||||||||||| ||||||||||    
T  34444883 gggagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 30127477 - 30127400
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||||| ||||||  | ||||||||||||| |||| |  ||| |||||||||||||||||||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 31622997 - 31623068
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||  ||||||||||||||| ||| ||  ||| |||||||||| |||||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 6691549 - 6691621
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagt 84  Q
    |||||| |||||| ||||||| || ||||||||||||  || ||||||||||| |||||||| |||||||||||    
T  6691549 gagaatcgaacctgagaccttgag-aggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagt 6691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 14558042 - 14557962
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| |||||   ||||||||||||||  ||| ||  ||| ||| |||||||||||||||||||||||||    
T  14558042 gggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 32613138 - 32613214
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtggg 87  Q
    |||||| |||| | ||| ||| || |||||||||||| |||| |  |||||||||||||||| ||||||||||||||    
T  32613138 gagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 6385940 - 6385881
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccacc 70  Q
    |||||| |||||| |||||||||||||||||||| || ||| ||  ||||||||||||||    
T  6385940 gagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccacc 6385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 12188317 - 12188380
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||||||||||| ||| ||  ||| ||||||||| || |||||||||||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 12234505 - 12234584
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||  ||  ||||||||||| ||| ||  |||||||||||||||| |||||| ||||||||||    
T  12234505 gagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 10338169 - 10338251
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||| |||| |||||| ||||||| |||||||||||||||  || ||  ||| |||||||||||  |||||||||||| ||||    
T  10338169 ggggggaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 14278117 - 14278186
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| ||||||||||||||||| ||||| ||| || |||| ||||| |||||| |||||||| |||||||    
T  14278117 aacctgagaccttaaggaggagcgcactcccaggtccaaagccaata-caccaggccaacccatgtgggtt 14278186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 6776627 - 6776679
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtg 85  Q
    ||||||||||||| | ||||||  ||| |||||||||||| ||||||||||||    
T  6776627 aggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 22995155 - 22995187
Alignment:
Q  57 aagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||||||||||| ||||||||||    
T  22995155 aagtcaataccaccagaccaactcaagtgggtt 22995187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 23793245 - 23793213
Alignment:
Q  57 aagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||||||||||| ||||||||||    
T  23793245 aagtcaataccaccagaccaactcaagtgggtt 23793213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 47044797 - 47044717
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||||| ||||||  |||||||||| |||||||||||  |||||||||||||||| |||| |||||||||||    
T  47044797 gggagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 21660164 - 21660221
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  21660164 aggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 21668928 - 21668985
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  21668928 aggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 25869576 - 25869650
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||| |||| | |||| || ||||||||||||||||||||||| |||||||||||| || || |||||||||||    
T  25869576 agaatcgaacataagactttgaggaggagcacactctcagatctcaagtcaataccatcaaactaacccaagtgg 25869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 28635774 - 28635696
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  ||||||||||||||| ||||||  |||||| |||||||||  |||||||||||||||    
T  28635774 gagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 37109349 - 37109427
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  37109349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 43728472 - 43728402
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    ||||| |||||| |||| || ||||||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  43728472 agaattgaacctgagactttgaggaggagcacactcccagatcataagtcaataccaccataccaacccaa 43728402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 39509151 - 39509070
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||| |||||| ||||||  ||||||||||||||| ||||||  ||| || |||||  |||||||||||||||||||    
T  39509151 ggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 46545767 - 46545711
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||||||| ||| ||| ||||||||| || ||||||||||||||||    
T  46545767 aggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 14451751 - 14451821
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||||||| |||||||||||||||||| |||  ||||||| ||||||  |||||||||||||||||    
T  14451751 gaacctaagaccttgaggaggagcacactctcatatcccaagtcaa-accaccgaaccaacccaagtgggtt 14451821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 20281186 - 20281265
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||| || ||||||  |||||| ||||||||||| ||||||  ||  |||||||||||||| |||||||||||||||    
T  20281186 cggggaggatcgaacctgggaccttgaggaggagcacgctctcaattcccaagtcaataccaccggaccaacccaagtgg 20281265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 49225450 - 49225509
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttttt 92  Q
    |||| ||||||||||||||  || ||| ||| ||||||||||||||||||||||||||||    
T  49225450 aggaagagcacactctcaggccttaagccaacaccaccagaccaacccaagtgggttttt 49225509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 49576892 - 49576963
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| |||||| ||||||| ||||||||||||||| ||  || |||| |||||||||||| |||||||||    
T  49576892 gagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 52254418 - 52254477
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||| ||||||||||||||||||| |||  |||||||||||| ||||||||| |||||||    
T  52254418 acctcaaggaggagcacactctcatatcccaagtcaataccatcagaccaactcaagtgg 52254477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 8325373 - 8325455
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| ||||||| |||| ||||||||||  || ||| ||| ||| |||||| | ||||||||||||||||    
T  8325373 cggggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgggtt 8325455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 19238571 - 19238653
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||  ||||||  ||||||||||||||| ||  ||  ||| |||||||||||| ||||||||||||||||    
T  19238571 cggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 37720210 - 37720292
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttt 91  Q
    |||||||| ||||||  |||||| |||||| |||||||| ||| ||  ||| ||||| |||||| ||||||||||||||||||    
T  37720210 gggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtttt 37720292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 43623442 - 43623516
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtg 85  Q
    |||||| |||||| |||| | |||||||||||||||| | ||||| ||||||||| ||| |||| ||||||||||    
T  43623442 gagaatcgaacctgagacttcaaggaggagcacactccctgatctcaagtcaatatcactagactaacccaagtg 43623516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 5795404 - 5795485
Alignment:
Q  8 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||  ||||| ||||||| |||||||||| ||||  || |   ||||||| |||||||||||||||||||||||||    
T  5795404 ggggagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggtt 5795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 13901819 - 13901746
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtg 85  Q
    ||||| |||| | |||||| |||||||| ||||||| ||| ||| ||| ||||||||| |||||||||||||||    
T  13901819 agaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 51250546 - 51250599
Alignment:
Q  37 ggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||||| ||||||  ||| |||||||||||| |||||||||||||||||    
T  51250546 ggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 24827896 - 24827824
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| ||||||  ||||||||| ||||| ||| ||  |||||||||||||| |||||||| ||||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggttt 24827824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 7292796 - 7292871
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||| |||||| |||| || ||||||||||||||| ||| |   ||| ||||||||| ||||||||||||||||    
T  7292796 gagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 9241030 - 9241101
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||||||  || |||||||||||  ||||||  ||| |||||||||||| ||||||||||||||||    
T  9241030 gaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 51747898 - 51747855
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaatacca 68  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  51747898 agaccttaaggaggagcacactctcatgtcttaagtcaatacca 51747855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 55427197 - 55427276
Alignment:
Q  10 ggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| |||||| ||||||  || ||||||| |||| ||| ||  ||| |||||||||||| ||||||||||||||||    
T  55427197 ggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 56236932 - 56236991
Alignment:
Q  30 ttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||| ||||||||||||| || |||  ||||||||||||||||||||||| || ||||||    
T  56236932 ttaaagaggagcacactcccatatcccaagtcaataccaccagaccaacctaattgggtt 56236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 1730487 - 1730565
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| || |||| || | ||||||||||||||||| ||  ||| ||||||||| ||  |||||||||||||||    
T  1730487 gagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 33619284 - 33619206
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| |||||||| ||| ||| ||||||  ||| |||||||||||   |||||||||||||||    
T  33619284 gagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 46295179 - 46295097
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||||| ||||||| |||||||||||||||  |  ||  ||| ||| || |||||||||||| |||||||||    
T  46295179 cggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgggtt 46295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 51948558 - 51948480
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  |||||| ||||||||  |||||  |||||||||| |||||  |||||||||||||||    
T  51948558 gagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 3743108 - 3743181
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagt 84  Q
    |||||| ||| || ||| ||| ||||||| |||||||| |||||  ||||||||| ||||||||||||| ||||    
T  3743108 gagaatcgaatctaagatcttgaggaggaacacactcttagatcccaagtcaatatcaccagaccaaccgaagt 3743181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 12822021 - 12821968
Alignment:
Q  36 aggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||| ||||||  ||||||||| ||||| |||||||| ||||||||    
T  12822021 aggagcacactcccagatcccaagtcaatatcaccaaaccaaccctagtgggtt 12821968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 31759657 - 31759734
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| ||| || ||||||| ||||||||||||||| ||  ||  ||| ||||||||| ||| |||||||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 40285700 - 40285623
Alignment:
Q  12 agaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||| |||| |||||||| || ||||||||||||| |||||   || ||||||||||||  ||||| ||||||||||    
T  40285700 agaatcgaactttagacctcaaagaggagcacactcccagattccaaatcaataccaccatgccaactcaagtgggtt 40285623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 49582255 - 49582206
Alignment:
Q  40 gcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||||  || |||||| |||||||||||||||||| ||||    
T  49582255 gcacactctcagatcccaaatcaatatcaccagaccaacccaagtaggtt 49582206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 20609002 - 20608922
Alignment:
Q  9 gggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||| |||| | ||||||| | ||| | ||||||| | ||||| ||| |||||||| |||| |||||||||||||||    
T  20609002 gggagaatcgaacttgagaccttgatgagaaacacactcccggatctcaagccaataccatcagatcaacccaagtgggtt 20608922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 32714934 - 32714998
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||| |||| |||||||| ||||||| |||  ||||||||||||||  |||||||||| ||||||    
T  32714934 agactttaaagaggagcatactctcacatcataagtcaataccaccgaaccaacccaaatgggtt 32714998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 38869844 - 38869788
Alignment:
Q  13 gaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccac 69  Q
    |||| |||||| ||||||| ||||||||||||||| ||||||  ||| |||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 51346483 - 51346531
Alignment:
Q  38 gagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    ||||||||||||| |||| |||||||||||  ||| |||||||||||||    
T  51346483 gagcacactctcaaatctcaagtcaataccgtcaggccaacccaagtgg 51346531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 56440483 - 56440443
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactc 47  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  56440483 cggggagaatcgaaccggagaccttaaggaggagcacactc 56440443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 15321 - 15399
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  ||||||||||||||| ||| ||  ||| |||||||||||||||||||||||||||||    
T  15321 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 41631 - 41709
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  |||||||||| |||||||||||| ||| ||||||||| || ||||||||||||||||    
T  41631 gagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 16773885 - 16773807
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||  ||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||||||    
T  16773885 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 14495825 - 14495881
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  14495825 aggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 30883196 - 30883275
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||| | ||||||| ||||||||||||||| ||| ||  ||| ||||||||| ||||||||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 34984884 - 34984805
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| ||||||| ||||||||||||||| ||| |   ||| ||||||||| ||||||||||||||||||||    
T  34984884 gagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 40461619 - 40461690
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||| ||||| ||||||||||||  ||| |||| |||||||||||| ||||||||||||||||    
T  40461619 aacctgagaccttgaggagaagcacactctcaagtctcaagttaataccaccagatcaacccaagtgggttt 40461690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 40281106 - 40281168
Alignment:
Q  27 accttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||||||||||||| |||  || |||||||||||  |||||||||||||||||    
T  40281106 accttaaggaggagcacactctcatatcccaaatcaataccacctaaccaacccaagtgggtt 40281168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 30109308 - 30109385
Alignment:
Q  13 gaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||| |||||| |||||| |||||||||||||||| ||| ||  ||| |||||||||||  |||||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 24652926 - 24652867
Alignment:
Q  31 taaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||| ||||||| || |||| ||||||||||||||||||||| ||||||| ||||    
T  24652926 taaggaggaacacactcccaaatctcaagtcaataccaccagaccaatccaagtgagttt 24652867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 29692392 - 29692463
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| |||| || ||||||||||||||| ||||||  ||  |||||||||||||||||||||| |||||||    
T  29692392 aacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 43241680 - 43241759
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    |||||| |||||| |||||| ||||| | ||||||||  |||||  ||||||||||||| ||||||||||||||| ||||    
T  43241680 gagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtgagttt 43241759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 16457892 - 16457810
Alignment:
Q  7 cggggagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||| |||| | ||||||| |||||||||||||||  || ||  ||| |||||||||||| |||||| |||||||||    
T  16457892 cggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 1410679 - 1410728
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    ||||||||||||||| || |||  ||||||||||||||||||||||||||    
T  1410679 aggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 21549149 - 21549213
Alignment:
Q  25 agaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||| |||||||||||||||||| ||| ||  ||| ||||||||| || ||||||||||||||||    
T  21549149 agactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 24046979 - 24047015
Alignment:
Q  254 ggtggtcgaaggtgtgcgacggtggaaaagtggttct 290  Q
    ||||||||| |||||||||||||||||||||||||||    
T  24046979 ggtggtcgagggtgtgcgacggtggaaaagtggttct 24047015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 87429 - 87500
Alignment:
Q  19 aaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||| ||||||| ||||||||||||||| |||||   ||| ||||||||| || |||||| ||||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 6844800 - 6844729
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||  ||||||| ||||||| || ||   |||||||||||||| | ||||||||||||||||    
T  6844800 gaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 26598578 - 26598523
Alignment:
Q  35 gaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggttt 90  Q
    ||||||||||||||||||||  ||| ||||||||| || |||| ||||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 30735090 - 30735153
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtttttcttg 96  Q
    ||||||||||||||||||| |   |||||||||| || ||  ||||||||||||||||||||||    
T  30735090 aggaggagcacactctcaggttacaagtcaatacgactaggtcaacccaagtgggtttttcttg 30735153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 25627135 - 25627057
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| ||||||| ||||||||||||||| ||  |   ||| ||||||||| || ||||||||||||||||    
T  25627135 gagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 43442274 - 43442216
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccac 69  Q
    |||||| |||||| ||||||| ||||||||||||||| ||||||| ||  |||||||||    
T  43442274 gagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccac 43442216  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 43230772 - 43230852
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtca--ataccaccagaccaacccaagtgggtt 89  Q
    |||||| ||| || ||| |||||||||||||||||||||||| |  ||| ||  ||||||| || ||||||||||||||||    
T  43230772 gagaattgaatctgagatcttaaggaggagcacactctcagaacccaagccaatataccactaggccaacccaagtgggtt 43230852  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 8278295 - 8278351
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||  ||  ||| |||||||| ||||||||||||||||||||    
T  8278295 aggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 19949636 - 19949691
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||||||| |||||| |||||||||||||||   |||||||||| ||||    
T  19949636 aggaggagcacactct-agatctcaagtcaataccaccaagtcaacccaagtaggtt 19949691  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 29075837 - 29075781
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||||| ||||||  ||| ||||||||| || | ||||||||||||||    
T  29075837 aggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 41797832 - 41797888
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||||||||| |||||||||| ||| |||||| |  ||||||||| |||||||||    
T  41797832 aggaggagcacattctcagatctcaagccaatacaattagaccaaccaaagtgggtt 41797888  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 163007 - 163078
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaa 82  Q
    |||||| |||||| |||||||| |||||||||||||||||| ||  ||||||| ||||| ||||||||||||    
T  163007 gagaatcgaacctcagaccttatggaggagcacactctcaggtcataagtcaaaaccactagaccaacccaa 163078  T

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Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 13044 - 13118
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtg 85  Q
    |||||| |||||| ||||||| ||||||||||||||| ||||||| ||| |||||||||||  |||||| |||||    
T  13044 gagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 11606 - 11534
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaag 83  Q
    |||||| |||||| ||||||  ||||||||||||||| ||||||  ||| |||||||||||| ||| ||||||    
T  11606 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 5287 - 5233
Alignment:
Q  35 gaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||||||||| || ||   ||||||||||||||||| |||||||||||||||    
T  5287 gaggagcacactcccatattctaagtcaataccaccagatcaacccaagtgggtt 5233  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 112360 - 112282
Alignment:
Q  11 gagaatagaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    |||||| |||||| |||||| || ||||| ||||||| |||||   ||| |||||| ||||| ||||||||||||||||    
T  112360 gagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 12442 - 12498
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||| | | |||||||||||||||| ||||||||| ||||||    
T  12442 aggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtt 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 22770 - 22826
Alignment:
Q  33 aggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgggtt 89  Q
    ||||||| |||||| |||| | | |||||||||||||||| ||||||||| ||||||    
T  22770 aggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtt 22826  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 94976 - 95044
Alignment:
Q  18 gaaccttagaccttaaggaggagcacactctcagatctaaagtcaataccaccagaccaacccaagtgg 86  Q
    |||||| ||||||| ||||||||||||||| ||| |   ||| ||||||||| || |||||||||||||    
T  94976 gaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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