View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21406_low_3 (Length: 604)

Name: NF21406_low_3
Description: NF21406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21406_low_3
NF21406_low_3
[»] chr8 (63 HSPs)
chr8 (18-453)||(639459-639905)
chr8 (18-453)||(825265-825711)
chr8 (18-453)||(275944-276390)
chr8 (32-410)||(18189103-18189478)
chr8 (97-398)||(12737043-12737331)
chr8 (452-597)||(269556-269701)
chr8 (452-597)||(646220-646365)
chr8 (452-597)||(831955-832100)
chr8 (453-597)||(6776676-6776821)
chr8 (467-597)||(24108924-24109053)
chr8 (467-597)||(24719781-24719911)
chr8 (453-597)||(24387827-24387973)
chr8 (453-597)||(28835580-28835725)
chr8 (453-597)||(29758179-29758325)
chr8 (453-592)||(43375726-43375867)
chr8 (455-597)||(22008801-22008944)
chr8 (453-597)||(16043497-16043642)
chr8 (453-597)||(23508672-23508817)
chr8 (488-597)||(41509776-41509885)
chr8 (91-398)||(10865770-10866091)
chr8 (460-597)||(16416152-16416289)
chr8 (468-597)||(13664995-13665125)
chr8 (468-597)||(13724270-13724400)
chr8 (486-597)||(24931283-24931394)
chr8 (453-597)||(3433973-3434119)
chr8 (454-597)||(17343080-17343224)
chr8 (453-597)||(23631424-23631569)
chr8 (453-597)||(22909785-22909928)
chr8 (484-597)||(24547076-24547189)
chr8 (467-592)||(41243561-41243686)
chr8 (484-597)||(17148382-17148495)
chr8 (484-597)||(273351-273464)
chr8 (484-597)||(642385-642498)
chr8 (467-597)||(9950666-9950793)
chr8 (467-597)||(25120353-25120483)
chr8 (484-597)||(22090594-22090707)
chr8 (458-597)||(225295-225435)
chr8 (458-597)||(738918-739058)
chr8 (458-597)||(862813-862953)
chr8 (484-592)||(15321211-15321319)
chr8 (484-592)||(15501580-15501688)
chr8 (456-597)||(16204416-16204558)
chr8 (458-597)||(43683548-43683688)
chr8 (453-541)||(16041821-16041910)
chr8 (467-597)||(20479505-20479635)
chr8 (484-597)||(5236090-5236203)
chr8 (484-597)||(21854046-21854158)
chr8 (484-597)||(24663395-24663508)
chr8 (484-597)||(30118187-30118300)
chr8 (458-597)||(701708-701848)
chr8 (497-597)||(16676497-16676597)
chr8 (467-597)||(1788406-1788536)
chr8 (484-597)||(828191-828304)
chr8 (484-597)||(21846641-21846753)
chr8 (467-587)||(21679061-21679181)
chr8 (467-587)||(22323672-22323797)
chr8 (503-597)||(9951193-9951287)
chr8 (501-597)||(16875096-16875195)
chr8 (473-597)||(20569035-20569159)
chr8 (473-597)||(20575228-20575352)
chr8 (544-592)||(19995418-19995467)
chr8 (491-597)||(20656225-20656331)
chr8 (467-521)||(19995332-19995386)
[»] chr7 (63 HSPs)
chr7 (21-407)||(49046560-49046946)
chr7 (91-398)||(26473688-26473995)
chr7 (91-398)||(26550128-26550435)
chr7 (453-597)||(2024297-2024441)
chr7 (453-597)||(32496669-32496813)
chr7 (453-597)||(13039352-13039498)
chr7 (453-597)||(7290510-7290653)
chr7 (453-597)||(368744-368889)
chr7 (453-597)||(11583060-11583206)
chr7 (453-597)||(15953305-15953450)
chr7 (453-592)||(15858598-15858738)
chr7 (453-597)||(2193051-2193196)
chr7 (453-597)||(122405-122551)
chr7 (453-597)||(6320996-6321141)
chr7 (489-597)||(1938881-1938989)
chr7 (453-597)||(3054602-3054748)
chr7 (486-597)||(7286801-7286912)
chr7 (467-592)||(113415-113543)
chr7 (453-592)||(36050856-36050997)
chr7 (484-597)||(2435483-2435596)
chr7 (467-587)||(12546068-12546189)
chr7 (486-597)||(7287469-7287580)
chr7 (467-592)||(3893001-3893126)
chr7 (467-597)||(26072394-26072525)
chr7 (467-597)||(26096181-26096312)
chr7 (467-597)||(12752782-12752912)
chr7 (479-597)||(48624502-48624619)
chr7 (484-597)||(12113644-12113757)
chr7 (497-597)||(18982150-18982250)
chr7 (467-597)||(15824631-15824761)
chr7 (474-597)||(26011334-26011456)
chr7 (484-597)||(7820821-7820934)
chr7 (484-597)||(7828132-7828245)
chr7 (484-597)||(11514020-11514133)
chr7 (484-597)||(13913268-13913381)
chr7 (484-597)||(15443712-15443825)
chr7 (484-597)||(16416113-16416226)
chr7 (484-597)||(27103699-27103812)
chr7 (484-597)||(27111047-27111160)
chr7 (484-597)||(27174513-27174626)
chr7 (484-597)||(42060445-42060558)
chr7 (467-598)||(13875212-13875343)
chr7 (458-597)||(30264250-30264390)
chr7 (497-597)||(15519026-15519128)
chr7 (467-587)||(44863089-44863210)
chr7 (521-597)||(16481128-16481204)
chr7 (513-597)||(13174122-13174208)
chr7 (474-597)||(25294421-25294544)
chr7 (484-597)||(37939185-37939298)
chr7 (504-597)||(38785820-38785913)
chr7 (484-592)||(48759241-48759349)
chr7 (484-597)||(10987506-10987620)
chr7 (467-597)||(45455840-45455971)
chr7 (512-597)||(13250375-13250460)
chr7 (544-597)||(19666310-19666363)
chr7 (484-597)||(10261881-10261996)
chr7 (467-597)||(11284947-11285077)
chr7 (467-597)||(18306097-18306227)
chr7 (501-597)||(13756470-13756568)
chr7 (467-597)||(13845151-13845281)
chr7 (486-545)||(16209646-16209705)
chr7 (544-597)||(141467-141521)
chr7 (467-592)||(12250204-12250329)
[»] scaffold0604 (1 HSPs)
scaffold0604 (21-408)||(3998-4385)
[»] chr5 (55 HSPs)
chr5 (21-410)||(20424564-20424962)
chr5 (139-398)||(27941693-27941952)
chr5 (453-597)||(1222080-1222225)
chr5 (453-597)||(9733033-9733178)
chr5 (453-597)||(10780558-10780703)
chr5 (453-597)||(29193112-29193257)
chr5 (453-597)||(35793600-35793745)
chr5 (453-597)||(23512638-23512782)
chr5 (467-597)||(25212250-25212380)
chr5 (467-597)||(25276402-25276532)
chr5 (453-597)||(111409-111554)
chr5 (453-597)||(11579529-11579674)
chr5 (453-597)||(9908-10053)
chr5 (453-585)||(25944991-25945125)
chr5 (467-597)||(28257392-28257522)
chr5 (453-597)||(11340199-11340344)
chr5 (453-597)||(18780490-18780635)
chr5 (453-597)||(17474143-17474287)
chr5 (453-597)||(19497541-19497686)
chr5 (497-592)||(24470181-24470276)
chr5 (467-592)||(21392044-21392169)
chr5 (453-586)||(22885485-22885619)
chr5 (496-597)||(1171474-1171578)
chr5 (486-587)||(23509880-23509981)
chr5 (479-597)||(23442259-23442376)
chr5 (467-597)||(4863163-4863293)
chr5 (453-597)||(27186393-27186539)
chr5 (484-597)||(7423501-7423614)
chr5 (484-597)||(25424278-25424391)
chr5 (458-597)||(20594353-20594493)
chr5 (467-597)||(20710385-20710515)
chr5 (486-597)||(21647090-21647200)
chr5 (484-597)||(21922346-21922459)
chr5 (484-597)||(21934428-21934541)
chr5 (484-597)||(21940598-21940711)
chr5 (484-597)||(37011432-37011545)
chr5 (484-597)||(37050880-37050993)
chr5 (484-597)||(43446194-43446308)
chr5 (484-597)||(4202237-4202350)
chr5 (484-597)||(21075756-21075869)
chr5 (467-587)||(23986622-23986742)
chr5 (484-597)||(25902594-25902707)
chr5 (484-597)||(35580151-35580264)
chr5 (458-597)||(16534006-16534145)
chr5 (319-398)||(12402287-12402366)
chr5 (504-597)||(21235704-21235797)
chr5 (484-597)||(22368947-22369060)
chr5 (484-597)||(23326849-23326962)
chr5 (498-597)||(11213877-11213975)
chr5 (467-597)||(11339069-11339199)
chr5 (484-597)||(24594396-24594511)
chr5 (474-587)||(19403442-19403555)
chr5 (491-592)||(24185421-24185522)
chr5 (498-597)||(27007891-27007992)
chr5 (544-592)||(3671352-3671401)
[»] chr1 (49 HSPs)
chr1 (91-397)||(43805325-43805625)
chr1 (453-597)||(20947369-20947514)
chr1 (453-597)||(24498695-24498840)
chr1 (453-597)||(37846585-37846731)
chr1 (453-597)||(44037006-44037152)
chr1 (460-592)||(20251963-20252095)
chr1 (458-597)||(22225876-22226016)
chr1 (208-398)||(31288744-31288934)
chr1 (453-597)||(20895923-20896067)
chr1 (488-597)||(20929367-20929476)
chr1 (453-597)||(21857372-21857518)
chr1 (453-597)||(22351886-22352031)
chr1 (467-597)||(18505262-18505393)
chr1 (486-597)||(20529367-20529477)
chr1 (467-587)||(35052764-35052884)
chr1 (453-597)||(22079795-22079939)
chr1 (487-597)||(20443627-20443736)
chr1 (467-597)||(41217148-41217278)
chr1 (488-597)||(17146434-17146543)
chr1 (490-597)||(35935775-35935884)
chr1 (458-592)||(9193786-9193921)
chr1 (484-597)||(5074460-5074573)
chr1 (484-597)||(17002718-17002831)
chr1 (484-597)||(20827380-20827493)
chr1 (484-597)||(51450505-51450618)
chr1 (474-597)||(5676802-5676925)
chr1 (497-597)||(21652185-21652285)
chr1 (484-592)||(24522213-24522321)
chr1 (467-597)||(22408425-22408556)
chr1 (484-597)||(18062113-18062226)
chr1 (497-597)||(21206919-21207019)
chr1 (458-597)||(24570530-24570670)
chr1 (497-597)||(45049538-45049638)
chr1 (453-535)||(22364608-22364691)
chr1 (484-597)||(41392345-41392458)
chr1 (497-597)||(18603231-18603331)
chr1 (497-597)||(20117325-20117425)
chr1 (467-597)||(49965727-49965858)
chr1 (473-597)||(2423263-2423382)
chr1 (484-597)||(29136713-29136825)
chr1 (491-597)||(21716045-21716151)
chr1 (484-592)||(22033743-22033853)
chr1 (484-592)||(42449512-42449620)
chr1 (484-597)||(7642741-7642853)
chr1 (255-398)||(20424938-20425081)
chr1 (496-585)||(35524637-35524726)
chr1 (467-521)||(27331365-27331419)
chr1 (467-597)||(9786572-9786692)
chr1 (544-597)||(27331451-27331505)
[»] chr6 (55 HSPs)
chr6 (453-592)||(19985328-19985467)
chr6 (467-597)||(35017908-35018038)
chr6 (453-597)||(13623372-13623516)
chr6 (453-597)||(25954499-25954644)
chr6 (453-597)||(11214042-11214188)
chr6 (453-597)||(16235369-16235514)
chr6 (453-597)||(18740265-18740410)
chr6 (453-597)||(33316860-33317005)
chr6 (453-597)||(18578434-18578579)
chr6 (453-598)||(18835796-18835942)
chr6 (453-597)||(16828255-16828399)
chr6 (453-597)||(4988587-4988733)
chr6 (488-597)||(3142965-3143074)
chr6 (453-597)||(18844152-18844297)
chr6 (453-597)||(23975303-23975452)
chr6 (467-587)||(13016960-13017079)
chr6 (467-583)||(17787374-17787489)
chr6 (453-597)||(14628811-14628955)
chr6 (467-597)||(25647005-25647135)
chr6 (467-597)||(23151323-23151453)
chr6 (467-597)||(18775120-18775250)
chr6 (467-597)||(31626347-31626477)
chr6 (479-597)||(1659844-1659961)
chr6 (489-597)||(16104466-16104574)
chr6 (467-597)||(18421726-18421857)
chr6 (484-597)||(19608320-19608433)
chr6 (497-597)||(18088954-18089054)
chr6 (497-597)||(25173123-25173223)
chr6 (484-598)||(10486778-10486892)
chr6 (484-597)||(937273-937386)
chr6 (479-592)||(15860660-15860772)
chr6 (484-597)||(16229481-16229594)
chr6 (484-597)||(16378434-16378547)
chr6 (484-597)||(16385758-16385871)
chr6 (458-597)||(29871598-29871738)
chr6 (484-597)||(1652115-1652228)
chr6 (484-597)||(9480200-9480313)
chr6 (484-597)||(16646030-16646143)
chr6 (484-597)||(16651396-16651509)
chr6 (484-597)||(21787109-21787222)
chr6 (496-597)||(25746438-25746539)
chr6 (484-597)||(23986941-23987054)
chr6 (497-597)||(27656248-27656348)
chr6 (517-597)||(2182014-2182096)
chr6 (467-597)||(22428201-22428331)
chr6 (484-597)||(23162034-23162147)
chr6 (265-398)||(1042981-1043114)
chr6 (484-597)||(26087669-26087782)
chr6 (543-587)||(18005375-18005419)
chr6 (453-525)||(18005303-18005376)
chr6 (477-597)||(18396789-18396909)
chr6 (484-535)||(22227831-22227882)
chr6 (475-587)||(22866037-22866148)
chr6 (544-592)||(32895889-32895938)
chr6 (487-534)||(18128013-18128061)
[»] scaffold0171 (1 HSPs)
scaffold0171 (453-597)||(30649-30793)
[»] chr3 (74 HSPs)
chr3 (453-597)||(15861323-15861467)
chr3 (453-597)||(54043033-54043177)
chr3 (453-597)||(19944408-19944551)
chr3 (453-597)||(22272634-22272779)
chr3 (453-597)||(16818647-16818792)
chr3 (453-597)||(18905872-18906017)
chr3 (453-597)||(18915813-18915958)
chr3 (453-592)||(45580741-45580882)
chr3 (453-597)||(16259235-16259380)
chr3 (453-597)||(18908280-18908425)
chr3 (453-592)||(14695397-14695537)
chr3 (486-597)||(2045215-2045326)
chr3 (486-597)||(2047944-2048055)
chr3 (453-597)||(38165821-38165967)
chr3 (486-592)||(23490395-23490501)
chr3 (453-597)||(7851279-7851424)
chr3 (453-597)||(11812404-11812549)
chr3 (467-597)||(33339646-33339772)
chr3 (485-592)||(4948608-4948715)
chr3 (486-597)||(10736445-10736555)
chr3 (458-597)||(14846766-14846906)
chr3 (458-597)||(15470584-15470725)
chr3 (453-597)||(30140583-30140729)
chr3 (453-584)||(19572914-19573047)
chr3 (458-597)||(25056648-25056789)
chr3 (467-597)||(38527481-38527611)
chr3 (467-585)||(51160592-51160711)
chr3 (453-597)||(19229939-19230085)
chr3 (488-585)||(5225388-5225484)
chr3 (484-597)||(17059599-17059712)
chr3 (460-597)||(12796328-12796466)
chr3 (484-597)||(15573897-15574010)
chr3 (484-597)||(44227318-44227431)
chr3 (467-597)||(319744-319874)
chr3 (484-597)||(1469801-1469914)
chr3 (484-597)||(2451715-2451828)
chr3 (484-597)||(12266648-12266760)
chr3 (484-597)||(15612916-15613029)
chr3 (484-597)||(30151229-30151342)
chr3 (484-597)||(53768553-53768666)
chr3 (467-597)||(6148935-6149065)
chr3 (467-597)||(6155527-6155657)
chr3 (484-597)||(13963510-13963623)
chr3 (484-597)||(17215481-17215594)
chr3 (484-597)||(27838609-27838722)
chr3 (484-597)||(55314273-55314386)
chr3 (467-597)||(14296345-14296474)
chr3 (467-597)||(14301972-14302101)
chr3 (497-597)||(41268133-41268233)
chr3 (453-597)||(8629671-8629816)
chr3 (458-597)||(8270524-8270667)
chr3 (484-597)||(13977786-13977899)
chr3 (484-597)||(45858912-45859025)
chr3 (484-597)||(8277662-8277777)
chr3 (484-597)||(8306471-8306586)
chr3 (484-597)||(11694229-11694344)
chr3 (467-597)||(47786998-47787129)
chr3 (475-587)||(40937571-40937683)
chr3 (467-587)||(53900718-53900838)
chr3 (467-597)||(11199679-11199809)
chr3 (517-597)||(13815554-13815634)
chr3 (484-597)||(16746320-16746433)
chr3 (484-597)||(16936122-16936235)
chr3 (539-597)||(50114334-50114393)
chr3 (491-592)||(35121536-35121637)
chr3 (467-597)||(17098514-17098654)
chr3 (488-535)||(17936121-17936168)
chr3 (496-597)||(14286932-14287033)
chr3 (496-597)||(17537205-17537306)
chr3 (473-534)||(30204368-30204429)
chr3 (474-521)||(12351981-12352028)
chr3 (544-597)||(12352060-12352114)
chr3 (544-597)||(22148904-22148958)
chr3 (473-521)||(22148824-22148872)
[»] chr4 (52 HSPs)
chr4 (21-397)||(21408165-21408549)
chr4 (453-597)||(53909972-53910119)
chr4 (453-597)||(10641977-10642122)
chr4 (453-597)||(18245778-18245923)
chr4 (453-597)||(9293315-9293460)
chr4 (453-597)||(15274916-15275061)
chr4 (453-597)||(17150501-17150646)
chr4 (453-597)||(7134755-7134900)
chr4 (453-592)||(16520408-16520548)
chr4 (453-587)||(16366866-16367002)
chr4 (453-597)||(109383-109528)
chr4 (457-597)||(8372209-8372350)
chr4 (453-597)||(26677781-26677926)
chr4 (453-597)||(5685040-5685185)
chr4 (453-597)||(13244239-13244385)
chr4 (453-597)||(54050596-54050740)
chr4 (458-597)||(15138654-15138795)
chr4 (453-597)||(18166476-18166621)
chr4 (458-597)||(14994094-14994234)
chr4 (453-597)||(19998113-19998262)
chr4 (453-597)||(37474336-37474480)
chr4 (457-597)||(53707063-53707204)
chr4 (467-597)||(55379021-55379149)
chr4 (467-597)||(12838454-12838584)
chr4 (453-597)||(41066721-41066866)
chr4 (473-597)||(8874611-8874735)
chr4 (453-597)||(54120435-54120572)
chr4 (453-597)||(15211124-15211271)
chr4 (487-597)||(33738087-33738197)
chr4 (453-597)||(16330044-16330189)
chr4 (467-597)||(34392988-34393118)
chr4 (484-597)||(6403662-6403775)
chr4 (497-597)||(15289193-15289293)
chr4 (484-597)||(16475761-16475875)
chr4 (497-597)||(15296360-15296460)
chr4 (473-587)||(20814153-20814267)
chr4 (484-587)||(22356895-22356998)
chr4 (467-597)||(23272306-23272436)
chr4 (484-597)||(26337378-26337491)
chr4 (467-597)||(16395865-16395994)
chr4 (467-585)||(30457498-30457615)
chr4 (484-597)||(10486568-10486680)
chr4 (467-597)||(13752415-13752545)
chr4 (458-597)||(47355124-47355264)
chr4 (456-597)||(13050287-13050429)
chr4 (502-597)||(14949911-14950007)
chr4 (467-597)||(45461155-45461285)
chr4 (513-597)||(28266153-28266237)
chr4 (490-597)||(21961719-21961826)
chr4 (467-521)||(12901890-12901944)
chr4 (544-592)||(44344689-44344738)
chr4 (506-592)||(18496631-18496718)
[»] scaffold0132 (5 HSPs)
scaffold0132 (453-597)||(39109-39254)
scaffold0132 (484-597)||(126-239)
scaffold0132 (484-597)||(8086-8199)
scaffold0132 (467-587)||(3153-3273)
scaffold0132 (467-587)||(11113-11233)
[»] scaffold0046 (1 HSPs)
scaffold0046 (453-597)||(19620-19764)
[»] scaffold0407 (4 HSPs)
scaffold0407 (453-597)||(357-501)
scaffold0407 (453-597)||(6821-6965)
scaffold0407 (467-592)||(3915-4040)
scaffold0407 (467-592)||(10381-10506)
[»] scaffold0116 (1 HSPs)
scaffold0116 (473-597)||(27539-27663)
[»] scaffold0023 (4 HSPs)
scaffold0023 (453-597)||(86401-86546)
scaffold0023 (484-597)||(11414-11527)
scaffold0023 (453-546)||(156628-156722)
scaffold0023 (467-585)||(91872-91990)
[»] chr2 (43 HSPs)
chr2 (453-597)||(22272785-22272931)
chr2 (453-597)||(23806718-23806863)
chr2 (453-597)||(12644104-12644249)
chr2 (453-597)||(22282018-22282164)
chr2 (453-597)||(38707244-38707389)
chr2 (453-597)||(21139743-21139888)
chr2 (456-592)||(22861435-22861573)
chr2 (486-597)||(23003613-23003724)
chr2 (453-576)||(19889174-19889298)
chr2 (453-597)||(21276788-21276936)
chr2 (453-597)||(9655012-9655156)
chr2 (453-597)||(43645114-43645260)
chr2 (486-597)||(8886069-8886179)
chr2 (453-598)||(22692187-22692333)
chr2 (453-598)||(22696834-22696980)
chr2 (453-597)||(12638437-12638582)
chr2 (486-597)||(20629592-20629703)
chr2 (453-597)||(3801561-3801708)
chr2 (473-597)||(15631253-15631376)
chr2 (484-597)||(24687818-24687931)
chr2 (484-597)||(25210507-25210620)
chr2 (467-597)||(36892885-36893016)
chr2 (484-597)||(8941326-8941439)
chr2 (484-597)||(11233400-11233513)
chr2 (484-597)||(22515247-22515360)
chr2 (484-597)||(23818074-23818187)
chr2 (484-597)||(28777849-28777962)
chr2 (484-597)||(24828753-24828868)
chr2 (484-587)||(14908587-14908690)
chr2 (484-597)||(23772431-23772544)
chr2 (486-597)||(23837539-23837649)
chr2 (484-597)||(24833205-24833318)
chr2 (484-592)||(20013021-20013129)
chr2 (490-597)||(460449-460560)
chr2 (467-592)||(4450427-4450552)
chr2 (497-597)||(33125961-33126061)
chr2 (484-597)||(17398745-17398858)
chr2 (467-597)||(28969810-28969940)
chr2 (474-597)||(6877335-6877454)
chr2 (484-597)||(34821913-34822028)
chr2 (484-597)||(12725939-12726055)
chr2 (528-597)||(25422333-25422402)
chr2 (539-597)||(25878220-25878279)
[»] scaffold0195 (1 HSPs)
scaffold0195 (467-597)||(17147-17277)
[»] scaffold0039 (1 HSPs)
scaffold0039 (453-597)||(21602-21746)
[»] scaffold0483 (1 HSPs)
scaffold0483 (453-597)||(5081-5227)
[»] scaffold0383 (3 HSPs)
scaffold0383 (453-597)||(12177-12322)
scaffold0383 (467-597)||(4933-5066)
scaffold0383 (453-528)||(1-77)
[»] scaffold0222 (2 HSPs)
scaffold0222 (453-597)||(28184-28329)
scaffold0222 (453-597)||(28622-28767)
[»] scaffold0109 (1 HSPs)
scaffold0109 (453-597)||(49921-50067)
[»] scaffold0019 (1 HSPs)
scaffold0019 (453-597)||(184045-184190)
[»] scaffold0396 (2 HSPs)
scaffold0396 (458-597)||(15338-15479)
scaffold0396 (467-597)||(14413-14543)
[»] scaffold0384 (1 HSPs)
scaffold0384 (453-597)||(703-848)
[»] scaffold1140 (1 HSPs)
scaffold1140 (453-597)||(919-1065)
[»] scaffold0465 (1 HSPs)
scaffold0465 (453-597)||(11489-11635)
[»] scaffold0303 (1 HSPs)
scaffold0303 (453-597)||(7520-7665)
[»] scaffold0207 (1 HSPs)
scaffold0207 (453-597)||(54-200)
[»] scaffold0138 (2 HSPs)
scaffold0138 (470-597)||(15521-15648)
scaffold0138 (453-597)||(26052-26197)
[»] scaffold0012 (1 HSPs)
scaffold0012 (453-597)||(249629-249775)
[»] scaffold0011 (5 HSPs)
scaffold0011 (473-592)||(129325-129444)
scaffold0011 (486-597)||(72590-72701)
scaffold0011 (486-597)||(76971-77082)
scaffold0011 (453-597)||(192389-192535)
scaffold0011 (467-511)||(257084-257128)
[»] scaffold0009 (3 HSPs)
scaffold0009 (467-597)||(269932-270063)
scaffold0009 (474-597)||(235819-235941)
scaffold0009 (474-520)||(236120-236166)
[»] scaffold0253 (2 HSPs)
scaffold0253 (453-597)||(10122-10267)
scaffold0253 (453-597)||(19547-19692)
[»] scaffold0529 (1 HSPs)
scaffold0529 (453-597)||(407-552)
[»] scaffold0447 (2 HSPs)
scaffold0447 (453-597)||(14182-14327)
scaffold0447 (467-597)||(2069-2202)
[»] scaffold0413 (1 HSPs)
scaffold0413 (453-597)||(10041-10186)
[»] scaffold0092 (1 HSPs)
scaffold0092 (453-597)||(13342-13487)
[»] scaffold0078 (2 HSPs)
scaffold0078 (486-597)||(36027-36138)
scaffold0078 (484-597)||(39723-39836)
[»] scaffold0003 (2 HSPs)
scaffold0003 (453-597)||(217870-218016)
scaffold0003 (484-597)||(4825-4938)
[»] scaffold0022 (2 HSPs)
scaffold0022 (458-597)||(7272-7412)
scaffold0022 (458-597)||(59559-59699)
[»] scaffold0102 (2 HSPs)
scaffold0102 (453-597)||(46065-46209)
scaffold0102 (467-597)||(37368-37498)
[»] scaffold0034 (1 HSPs)
scaffold0034 (453-597)||(77204-77346)
[»] scaffold0026 (2 HSPs)
scaffold0026 (453-597)||(26775-26920)
scaffold0026 (458-597)||(66632-66772)
[»] scaffold0597 (1 HSPs)
scaffold0597 (453-597)||(3340-3484)
[»] scaffold0139 (1 HSPs)
scaffold0139 (452-597)||(17328-17474)
[»] scaffold2147 (1 HSPs)
scaffold2147 (453-597)||(148-294)
[»] scaffold0225 (2 HSPs)
scaffold0225 (453-597)||(14200-14345)
scaffold0225 (479-597)||(27724-27841)
[»] scaffold0032 (1 HSPs)
scaffold0032 (453-597)||(53552-53697)
[»] scaffold1388 (1 HSPs)
scaffold1388 (453-592)||(1624-1764)
[»] scaffold0218 (1 HSPs)
scaffold0218 (486-587)||(7369-7470)
[»] scaffold0058 (1 HSPs)
scaffold0058 (453-597)||(53744-53889)
[»] scaffold0244 (1 HSPs)
scaffold0244 (453-597)||(24548-24692)
[»] scaffold0049 (2 HSPs)
scaffold0049 (485-597)||(44038-44150)
scaffold0049 (473-597)||(30257-30382)
[»] scaffold0130 (1 HSPs)
scaffold0130 (453-597)||(30720-30865)
[»] scaffold0104 (1 HSPs)
scaffold0104 (453-597)||(50928-51074)
[»] scaffold0315 (1 HSPs)
scaffold0315 (453-597)||(20360-20507)
[»] scaffold0158 (1 HSPs)
scaffold0158 (467-597)||(15980-16110)
[»] scaffold0266 (2 HSPs)
scaffold0266 (488-597)||(13314-13422)
scaffold0266 (488-586)||(5726-5823)
[»] scaffold0106 (1 HSPs)
scaffold0106 (486-591)||(27872-27979)
[»] scaffold1610 (1 HSPs)
scaffold1610 (453-597)||(348-493)
[»] scaffold1605 (1 HSPs)
scaffold1605 (453-597)||(1086-1231)
[»] scaffold0234 (1 HSPs)
scaffold0234 (453-597)||(19722-19868)
[»] scaffold0302 (1 HSPs)
scaffold0302 (479-597)||(3733-3851)
[»] scaffold0043 (1 HSPs)
scaffold0043 (503-597)||(83742-83836)
[»] scaffold0068 (1 HSPs)
scaffold0068 (467-598)||(59475-59606)
[»] scaffold0008 (5 HSPs)
scaffold0008 (473-597)||(130339-130463)
scaffold0008 (473-585)||(133933-134045)
scaffold0008 (467-597)||(20485-20614)
scaffold0008 (467-597)||(28060-28189)
scaffold0008 (484-558)||(33994-34068)
[»] scaffold0498 (1 HSPs)
scaffold0498 (486-597)||(12177-12287)
[»] scaffold0077 (1 HSPs)
scaffold0077 (467-597)||(24845-24976)
[»] scaffold0120 (2 HSPs)
scaffold0120 (487-597)||(29796-29905)
scaffold0120 (467-503)||(26575-26611)
[»] scaffold0028 (1 HSPs)
scaffold0028 (467-575)||(91290-91399)
[»] scaffold0191 (1 HSPs)
scaffold0191 (486-597)||(970-1081)
[»] scaffold0037 (3 HSPs)
scaffold0037 (490-597)||(90346-90453)
scaffold0037 (474-597)||(26930-27053)
scaffold0037 (467-598)||(66853-66984)
[»] scaffold0021 (2 HSPs)
scaffold0021 (467-597)||(138935-139065)
scaffold0021 (467-597)||(76195-76325)
[»] scaffold0269 (1 HSPs)
scaffold0269 (468-592)||(2660-2785)
[»] scaffold0083 (1 HSPs)
scaffold0083 (473-587)||(12111-12225)
[»] scaffold0367 (1 HSPs)
scaffold0367 (479-597)||(5606-5723)
[»] scaffold0113 (1 HSPs)
scaffold0113 (484-597)||(17531-17644)
[»] scaffold0091 (1 HSPs)
scaffold0091 (484-597)||(17998-18111)
[»] scaffold0141 (2 HSPs)
scaffold0141 (458-597)||(24797-24937)
scaffold0141 (458-597)||(20542-20682)
[»] scaffold0467 (1 HSPs)
scaffold0467 (488-585)||(12200-12297)
[»] scaffold0017 (1 HSPs)
scaffold0017 (479-597)||(41695-41812)
[»] scaffold1148 (1 HSPs)
scaffold1148 (484-597)||(125-238)
[»] scaffold0251 (1 HSPs)
scaffold0251 (484-597)||(16099-16212)
[»] scaffold0184 (1 HSPs)
scaffold0184 (484-597)||(33008-33121)
[»] scaffold0107 (1 HSPs)
scaffold0107 (484-597)||(29245-29358)
[»] scaffold0647 (1 HSPs)
scaffold0647 (458-597)||(8669-8809)
[»] scaffold0622 (1 HSPs)
scaffold0622 (467-597)||(7048-7180)
[»] scaffold0359 (1 HSPs)
scaffold0359 (467-597)||(14002-14131)
[»] scaffold0076 (1 HSPs)
scaffold0076 (497-597)||(37184-37284)
[»] scaffold0004 (2 HSPs)
scaffold0004 (467-554)||(198235-198322)
scaffold0004 (544-597)||(331362-331416)
[»] scaffold0692 (1 HSPs)
scaffold0692 (467-592)||(1564-1689)
[»] scaffold0124 (1 HSPs)
scaffold0124 (484-597)||(3726-3839)
[»] scaffold0450 (1 HSPs)
scaffold0450 (467-597)||(4988-5119)
[»] scaffold0240 (1 HSPs)
scaffold0240 (467-597)||(5452-5582)
[»] scaffold0892 (1 HSPs)
scaffold0892 (479-597)||(2190-2307)
[»] scaffold0181 (1 HSPs)
scaffold0181 (484-597)||(34430-34543)
[»] scaffold0462 (1 HSPs)
scaffold0462 (473-587)||(4048-4163)
[»] scaffold0480 (1 HSPs)
scaffold0480 (467-597)||(7544-7674)
[»] scaffold0103 (1 HSPs)
scaffold0103 (467-597)||(31380-31511)
[»] scaffold0395 (1 HSPs)
scaffold0395 (467-597)||(13590-13723)
[»] scaffold0044 (1 HSPs)
scaffold0044 (484-597)||(67578-67691)
[»] scaffold0007 (1 HSPs)
scaffold0007 (484-597)||(87052-87165)
[»] scaffold0434 (1 HSPs)
scaffold0434 (489-597)||(2535-2643)
[»] scaffold0270 (1 HSPs)
scaffold0270 (513-597)||(24259-24343)
[»] scaffold0115 (1 HSPs)
scaffold0115 (497-597)||(697-797)
[»] scaffold2007 (1 HSPs)
scaffold2007 (544-597)||(1-54)
[»] scaffold0673 (1 HSPs)
scaffold0673 (467-540)||(4272-4345)
[»] scaffold0010 (1 HSPs)
scaffold0010 (484-597)||(139272-139384)
[»] scaffold1124 (1 HSPs)
scaffold1124 (498-590)||(1500-1591)
[»] scaffold0316 (1 HSPs)
scaffold0316 (489-580)||(19974-20066)
[»] scaffold0031 (2 HSPs)
scaffold0031 (475-597)||(29932-30054)
scaffold0031 (490-587)||(68215-68312)
[»] scaffold0002 (1 HSPs)
scaffold0002 (546-597)||(391325-391376)
[»] scaffold0175 (2 HSPs)
scaffold0175 (548-597)||(13057-13106)
scaffold0175 (484-597)||(12835-12952)
[»] scaffold0155 (1 HSPs)
scaffold0155 (484-597)||(25416-25529)
[»] scaffold0342 (1 HSPs)
scaffold0342 (496-597)||(3690-3790)
[»] scaffold0226 (2 HSPs)
scaffold0226 (497-597)||(15548-15650)
scaffold0226 (501-597)||(24946-25044)
[»] scaffold0292 (4 HSPs)
scaffold0292 (544-597)||(8878-8932)
scaffold0292 (544-597)||(17327-17381)
scaffold0292 (474-521)||(8964-9011)
scaffold0292 (474-521)||(17413-17460)
[»] scaffold0501 (1 HSPs)
scaffold0501 (522-597)||(12094-12169)
[»] scaffold0247 (1 HSPs)
scaffold0247 (467-592)||(16699-16824)
[»] scaffold0051 (1 HSPs)
scaffold0051 (467-521)||(55866-55920)
[»] scaffold0190 (1 HSPs)
scaffold0190 (491-535)||(8058-8102)


Alignment Details
Target: chr8 (Bit Score: 383; Significance: 0; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 639459 - 639905
Alignment:
Q  18 attactaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  639459 attactaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgt 639558  T
Q  118 ggtctaaggaa-gtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggttcaat 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  639559 ggtctaaggaaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgaggctgtttaggttcaat 639658  T
Q  217 caacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgac 316  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  639659 caacacatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttggtccttggagtgacgttgtgac 639758  T
Q  317 ggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcat-ggtttttaaagatgttttaaattctagcattgct----- 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||         
T  639759 ggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatgggtttttaaagatgttttaaattctaacattgctcatga 639858  T
Q  411 ----gagagtttgcggccatatttgaacgacaaggatgcttgtgcaa 453  Q
        |||||||||||||||||||||||||||||||||||||||||||    
T  639859 cttggagagtttgcggccatatttgaacgacaaggatgcttgtgcaa 639905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 825265 - 825711
Alignment:
Q  18 attactaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  825265 attactaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgt 825364  T
Q  118 ggtctaaggaa-gtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggttcaat 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  825365 ggtctaaggaaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgaggctgtttaggttcaat 825464  T
Q  217 caacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgac 316  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  825465 caacacatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttggtccttggagtgacgttgtgac 825564  T
Q  317 ggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcat-ggtttttaaagatgttttaaattctagcattgct----- 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||         
T  825565 ggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatgggtttttaaagatgttttaaattctaacattgctcatga 825664  T
Q  411 ----gagagtttgcggccatatttgaacgacaaggatgcttgtgcaa 453  Q
        |||||||||||||||||||||||||||||||||||||||||||    
T  825665 cttggagagtttgcggccatatttgaacgacaaggatgcttgtgcaa 825711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 18 - 453
Target Start/End: Complemental strand, 276390 - 275944
Alignment:
Q  18 attactaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  276390 attactaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgt 276291  T
Q  118 ggtctaaggaa-gtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggttcaat 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  276290 ggtctaaggaaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgaggctgtttaggttcaat 276191  T
Q  217 caacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgac 316  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  276190 taacacatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttggtccttggagtgacgttgtgac 276091  T
Q  317 ggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcat-ggtttttaaagatgttttaaattctagcattgct----- 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||         
T  276090 ggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatgggtttttaaagatgttttaaattctaacattgctcatga 275991  T
Q  411 ----gagagtttgcggccatatttgaacgacaaggatgcttgtgcaa 453  Q
        |||||||||||||||||||||||||||||||||||||||||||    
T  275990 cttggagagtttgcggccatatttgaacgacaaggatgcttgtgcaa 275944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 32 - 410
Target Start/End: Complemental strand, 18189478 - 18189103
Alignment:
Q  32 tcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgtggtctaaggaagta 131  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| | ||||||||||||    
T  18189478 tcttgttaagaatgtcccaaaaagacatgtgcaaggctgtagtaatattgtggttgatgaagatcctattattcgtgacataatgagatctaaggaagta 18189379  T
Q  132 acaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccg-ttgagtctgtttaggttcaatcaacgcatgttgaa 230  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |  || | ||||||||||| | |||| ||    
T  18189378 acaactaatgtgttggtgggtgatgttataaaccttgaggaagaactatattctagcacttccgtttgag-caattcaagttcaatcaacacctgttcaa 18189280  T
Q  231 gcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgacggacttagattata 330  Q
    || |||||||||||||||||||  ||||||||| ||| | |  || |||||||||| ||| ||| |||||||||||||| |||||| |||||||| ||||    
T  18189279 gctatgactgaaatacaaggtgtagaccaacagggcatcgattttcctgatatgcggatcgttggtccttggagtgacgctgtgacagacttagactata 18189180  T
Q  331 atcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaattctagcattgct 410  Q
    |||||||   |||| |||||||||||||| ||||||| ||||||||||||| |||||| ||| ||||| ||| |||||||    
T  18189179 atcaaga---cccaacttggtatggtttaggttcttctaatgtcatggtttctaaagaggttctaaatcctaacattgct 18189103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 97 - 398
Target Start/End: Original strand, 12737043 - 12737331
Alignment:
Q  97 ctattattcttgacataatgtggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgt 196  Q
    |||||||| ||||||||||| ||||||||||||||| |       ||||||||||||||||||||||| || |||||||||||||||||      |  ||    
T  12737043 ctattatttttgacataatgaggtctaaggaagtaata-------tgttggtgggtgatgttataaaccttaaggaagaactatattct------tttgt 12737129  T
Q  197 tgagtctgtttaggttcaatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgat 296  Q
    || |    || ||||||||||| | | |||||||| ||||||||||||||||||||  || ||||| |||||| ||||| |||||||||||||| ||| |    
T  12737130 tggggtaattcaggttcaatcagcacttgttgaagtgatgactgaaatacaaggtggagatcaacaaagcaacgaacttcctgatatgcgcatcgttggt 12737229  T
Q  297 ccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaa 396  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12737230 ccttggagtgacgttgtgacggacttagattatattcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttctaaagatgttttaa 12737329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 452 - 597
Target Start/End: Complemental strand, 269701 - 269556
Alignment:
Q  452 aatgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  269701 aatgtaatttattgcttcataacatgtatatattgattactctggtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 269602  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  269601 tttgaatgtggcgtagcctctatttcatgaataaatatattattcg 269556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 452 - 597
Target Start/End: Original strand, 646220 - 646365
Alignment:
Q  452 aatgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  646220 aatgtaatttattgcttcataacatgtatatattgattactctggtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 646319  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  646320 tttgaatgtggcgtagcctctatttcatgaataaatatattattcg 646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 452 - 597
Target Start/End: Original strand, 831955 - 832100
Alignment:
Q  452 aatgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  831955 aatgtaatttattgcttcataacatgtatatattgattactctggtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 832054  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  832055 tttgaatgtggcgtagcctctatttcatgaataaatatattattcg 832100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 6776676 - 6776821
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  6776676 atgtaatttatttattcataacatgtatat-ttgaatttactctagtttatattccgctgcgaccgttgaggtttatatacatgtttattggtttttgaa 6776774  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||    
T  6776775 ttttgaatgtggcgtagcctctatttcttgaatacatgtattattcg 6776821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 24108924 - 24109053
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  24108924 ttcataacatgtatatgttgattactctggtttatattccgctgcgattgttgaggtttatatacatgtttattgg-ttttgaattttgaatgtggcgta 24109022  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  24109023 gcctctatttcttgaataaatgtattattcg 24109053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 24719781 - 24719911
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24719781 ttcatgacatgtatatttggattactctagtttatattccactgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgta 24719880  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  24719881 gcctctatttcttgaataaatgtattattcg 24719911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 24387827 - 24387973
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  24387827 atgtaatttattgattcatgacatgtacatattttgattactctggtttacattccgctgcaactgttgagctttatatacatgtttattggtttttgaa 24387926  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  24387927 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 24387973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 28835725 - 28835580
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||    
T  28835725 atgtaatttatttattcataacatgtatat-ttgaatttactctgatttatattccgctgcgactgttgaggtttatatacatgtttattggtttttaaa 28835627  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  28835626 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 28835580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 29758325 - 29758179
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||  ||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  29758325 atgtgatttattgattcatgacatgtatatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgttttttggtttttgaa 29758226  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29758225 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 29758179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 43375726 - 43375867
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  43375726 atgtaatttattgattcatgacatgtacatattttgattactctggtttatattccgctgcaactgttgaggtttatatacatgcttattggtttttgaa 43375825  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  43375826 ttttgaatgtggcgtaacctctatttattgaataaatatatt 43375867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 455 - 597
Target Start/End: Original strand, 22008801 - 22008944
Alignment:
Q  455 gtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||    
T  22008801 gtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactattgaggtttatatacacgtttattggtttttgaatt 22008899  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  22008900 ttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 22008944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 16043497 - 16043642
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  |||||||    
T  16043497 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgacttttgaa 16043595  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  16043596 ttttgaatgtggcgtaacctctatttcttgaataaatgtattattcg 16043642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 23508817 - 23508672
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  23508817 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccactgcgactgttgaggtttatatacatgtttattggtttttgaa 23508719  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| ||||||||| |||||||||| |||| ||||    
T  23508718 ttttgaatgtggcgtatcctctatttattgaataaatgtattattcg 23508672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 488 - 597
Target Start/End: Original strand, 41509776 - 41509885
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41509776 ttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaat 41509875  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  41509876 gtattattcg 41509885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 91 - 398
Target Start/End: Original strand, 10865770 - 10866091
Alignment:
Q  91 aagatcctattattcttgacataatgtggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcac 190  Q
    |||||||||||||||| |||||||||   |||| ||||||||||||| ||||||| |||| |||||||||||||  ||||||||||||||||| |||| |    
T  10865770 aagatcctattattctcgacataatgaaatctacggaagtaacaactgatgtgtttgtggttgatgttataaaccctgaggaagaactatattatagccc 10865869  T
Q  191 ttccgttgagtctgtttaggttcaatcaacgcatgttgaagc---------------gatgactgaaatacaaggtgatgaccaacagagcaacaaactt 275  Q
    ||||| |||| | ||| |||||| |||| | ||||||||||                ||||| ||||| |||| |||| ||| |||| |||||| || ||    
T  10865870 ttccgctgaggcagttgaggttctatcagcacatgttgaagaagcacatgttgaagtgatgaatgaaaaacaaagtgaagacaaacatagcaacgaa-tt 10865968  T
Q  276 tctgatatgcgcatccttgatccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtca 375  Q
     || ||||||||||  ||| ||||||||||||||  || || ||||| ||||||| ||| |||||||| ||||||||||||||  |||||||||||||||    
T  10865969 cctcatatgcgcattgttggtccttggagtgacgcagtcacagacttggattatattcaggatcccccgtcttggtatggtttgagttcttccaatgtca 10866068  T
Q  376 tggtttttaaagatgttttaaat 398  Q
    |||||  ||||||||||||||||    
T  10866069 tggttactaaagatgttttaaat 10866091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 460 - 597
Target Start/End: Complemental strand, 16416289 - 16416152
Alignment:
Q  460 ttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg 559  Q
    |||||| ||||| |||||||||| | ||||| | | |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  16416289 ttatttattcatgacatgtatatttggattattttggtttatattccgctgcgactattgaggtttatatacatgtttattggtttttgaattttgaatg 16416190  T
Q  560 tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||||||||| |||| ||||    
T  16416189 tggcgtagcctttatttcttgaataaatgtattattcg 16416152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 468 - 597
Target Start/End: Original strand, 13664995 - 13665125
Alignment:
Q  468 tcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgt 565  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  13664995 tcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatatggcat 13665093  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  13665094 agcctctatttcttgaataaatgtattattcg 13665125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 468 - 597
Target Start/End: Original strand, 13724270 - 13724400
Alignment:
Q  468 tcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgt 565  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  13724270 tcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatatggcat 13724368  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  13724369 agcctctatttcttgaataaatgtattattcg 13724400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 24931283 - 24931394
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||| |||||||    
T  24931283 gattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattgacttttgaattttgaatgtggcgtagcctctatttcatgaataa 24931382  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  24931383 atgtattattcg 24931394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 3433973 - 3434119
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttt-tgaa 550  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||| ||||||||||||||||||| || ||||||| ||||    
T  3433973 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactattgaggtttatatacatgtttaatggttttttgaa 3434072  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  3434073 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 3434119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 454 - 597
Target Start/End: Complemental strand, 17343224 - 17343080
Alignment:
Q  454 tgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    |||||||||||| |||||||||||||||| ||||  |||||||  |||||||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  17343224 tgtaatttatttattcataacatgtatat-ttgaaattactctgatttatattccactgcgactgttgaggtttatatacatgtttattggtttttgaat 17343126  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||| || ||||| |||||||||||||||||||| |||| ||||    
T  17343125 tttgaaagtagcgtaacctctatttcttgaataaatgtattattcg 17343080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 23631424 - 23631569
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| |||||  ||||||||||||| | ||||||||||||||||||||||| ||||| |||||||||    
T  23631424 atgtaatttattgattcataacatgtatacttggatttactctgatttatattccgctacgactgttgaggtttatatacatgtttattgatttttgaat 23631523  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||    
T  23631524 tttgaatgtggcgttgcctctatttcttgaataaatgtattattcg 23631569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 22909785 - 22909928
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||| |||||||||||| ||||  |||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||    
T  22909785 atgtaatttattgattcgtaacatgtatat-ttgaatttactctagtttatattccgctgcga--gttgaggtttatatacatgtttattggtttttgaa 22909881  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||| ||||||||||| || |||| ||||    
T  22909882 ttttgaatgttgcgtagcctctttttcttgaatatatgtattattcg 22909928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 24547189 - 24547076
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| ||||| |||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||    
T  24547189 ttgatcactctggtttatattccgctgcgattgttgaagtttatatacatgtttattggtttttgaattttgaatgtgacgtagcctctatttcttaaat 24547090  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  24547089 aaatgtattattcg 24547076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 592
Target Start/End: Complemental strand, 41243686 - 41243561
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |  |||||||| |||||||||||||||| |||||||| |||||||||||||| |||||| |||||||||||| | | ||||||    
T  41243686 ttcatgacatgtatatttgaattactctggtttatattccgctgcgactgttgaagtttatatacatgtttattgg-ttttgaattttgtacgatggcgt 41243588  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||| ||||    
T  41243587 agcctctatttcttgaataaatgtatt 41243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 17148382 - 17148495
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  17148382 ttgatcactctgatttatattccactgcaactgttgaggtttatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 17148481  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  17148482 aaatgtattattcg 17148495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 273351 - 273464
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  273351 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 273450  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  273451 aaatgtattattcg 273464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 642498 - 642385
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  642498 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 642399  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  642398 aaatgtattattcg 642385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 9950666 - 9950793
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||| |||   ||||||||||||||||||||||  |||||||||| |||||||| ||| ||||||    
T  9950666 ttcatgacatgtatatttggattactctggtttatattctgct---actgttgaggtttatatacatgcttattggtttt-gaattttggatgatggcgt 9950761  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  9950762 agcctctatttcttgaataaatgtattattcg 9950793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 25120483 - 25120353
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||| | || |||||||  | ||||| ||| ||||||    
T  25120483 ttcatgacatgtatatttggattactcttgtttatattccgctgcgactgttgaagtttatatacatattta-tggttttgaatttttgtatgatggcgt 25120385  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  25120384 agcctctatttcttgaataaatgtattattcg 25120353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 22090594 - 22090707
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  22090594 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 22090693  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  22090694 aaatgtattattcg 22090707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 225295 - 225435
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| |||||||||| |||| |||||||||||| | ||||||||||||||    
T  225295 atttatttgctcatgacatgtatatattcgatcactctgatttatattccgctgtaactgttgagatttacatacatgtctatcgttttttgaattttga 225394  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  225395 ataagacgtaatctctatttcttgaataaatgtattattcg 225435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 738918 - 739058
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| |||||||||| |||| |||||||||||| | ||||||||||||||    
T  738918 atttatttgctcatgacatgtatatattcgatcactctgatttatattccgctgtaactgttgagatttacatacatgtctatcgttttttgaattttga 739017  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  739018 ataagacgtaatctctatttcttgaataaatgtattattcg 739058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 862813 - 862953
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| |||||||||| |||| |||||||||||| | ||||||||||||||    
T  862813 atttatttgctcatgacatgtatatattcgatcactctgatttatattccgctgtaactgttgagatttacatacatgtctatcgttttttgaattttga 862912  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  862913 ataagacgtaatctctatttcttgaataaatgtattattcg 862953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 592
Target Start/End: Original strand, 15321211 - 15321319
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  15321211 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 15321310  T
Q  584 aaatatatt 592  Q
    |||| ||||    
T  15321311 aaatgtatt 15321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 592
Target Start/End: Original strand, 15501580 - 15501688
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  15501580 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 15501679  T
Q  584 aaatatatt 592  Q
    |||| ||||    
T  15501680 aaatgtatt 15501688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 597
Target Start/End: Original strand, 16204416 - 16204558
Alignment:
Q  456 taatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattt 553  Q
    |||||||||  ||||| ||||||| || ||  ||| ||||| |||| ||||||||||||||||||||| ||||||||||||| |  ||||||   | |||    
T  16204416 taatttattgattcatgacatgtacatatttggatcactctggtttctattccgctgcaactgttgagttttatatacatgt-tcatggtttcgaatttt 16204514  T
Q  554 tgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  16204515 tgaatgtggcgtagcctctatttcttgaataaatgtattattcg 16204558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 43683688 - 43683548
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||||||| ||||||| ||||||||||||  |||||||||||||||    
T  43683688 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaactgttaaggtttacatacatgtctatcagtttttgaattttga 43683589  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  43683588 ataagacgtaatctctatttcttgaataaatgtattattcg 43683548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 453 - 541
Target Start/End: Original strand, 16041821 - 16041910
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg 541  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  16041821 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattg 16041910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 20479635 - 20479505
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| ||||||||||||||| |||  | ||||||||||| |||| |||||||| |||||||||||||| || |||||||  | ||||| ||| ||||||    
T  20479635 ttcatgacatgtatatgttgagtaccatggtttatattccactgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatggcgt 20479537  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  20479536 agcctctatttcttgaataaatgtattattcg 20479505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 5236203 - 5236090
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  ||| |||| ||||||    
T  5236203 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctcaatttattgaat 5236104  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  5236103 aaatgtattattcg 5236090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21854046 - 21854158
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||  | ||||  |||||||||||||||    
T  21854046 ttgatcactctgatttattttccgctgcaactgttgaggtttatatacatgtctaacgg-ttttgaattttgaataagacgtaatctctatttcttgaat 21854144  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21854145 aaatgtattattcg 21854158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 24663395 - 24663508
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| ||| |||| ||| |||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  24663395 ttgatcactctgatttatattccgctgcgactattgaagttcatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 24663494  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  24663495 aaatgtattattcg 24663508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 30118300 - 30118187
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| ||| |||| ||| |||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  30118300 ttgatcactctgatttatattccgctgcgactattgaagttcatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 30118201  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  30118200 aaatgtattattcg 30118187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 701708 - 701848
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| |||||||||| |||| |||||||| ||| | ||||||||||||||    
T  701708 atttatttgctcatgacatgtatatattcgatcactctgatttatattccgctgtaactgttgagatttacatacatgtttatcgttttttgaattttga 701807  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  701808 ataagacgtaatctctatttcttgaataaatgtattattcg 701848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 16676497 - 16676597
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| ||||||||||||| | |||||||| ||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| |||    
T  16676497 tttatattccgctgtaactgttgaggttcacatacatgtttatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattc 16676596  T
Q  597 g 597  Q
    |    
T  16676597 g 16676597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 1788406 - 1788536
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||| | ||||||||| |||||| |||||||| |||||||||||||| || |||||||  | ||||| ||| || |||    
T  1788406 ttcatgacatgtatatttggattactttggtttatatttcgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatgacgt 1788504  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  1788505 agcctctatttcttgaataaatgtattattcg 1788536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 828304 - 828191
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||| ||||    
T  828304 ttgatcactctgatttatattccgctgntactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttctggaat 828205  T
Q  584 aaatatattcttcg 597  Q
    | || |||| ||||    
T  828204 agatgtattattcg 828191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21846641 - 21846753
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||||  | ||||  |||||||| ||||||    
T  21846641 ttgatcactctgatttattttccgctgcaactgttgaggtttatatacatgtcta-tcgattttgaattttgaataagacgtaatctctatttgttgaat 21846739  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21846740 aaatgtattattcg 21846753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 587
Target Start/End: Complemental strand, 21679181 - 21679061
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||| | |||| |||||| |||||||||||||||  ||||||||| ||||||| |||| || || |  ||||||||||||||| || |||    
T  21679181 ttcatgacatgtatgttttgagtactctggtttatattccgctgtgactgttgagatttatatgcatgcctgtt-gagtttgaattttgaatgatgacgt 21679083  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||| ||||||||||||||||||    
T  21679082 agcatctatttcttgaataaat 21679061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 587
Target Start/End: Original strand, 22323672 - 22323797
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctat-----tggtttttgaattttgaatgtg 561  Q
    ||||| |||||||||| | ||| ||||| |||||||||||||||| |||||||| |||||||||||||| |||     | | ||||||| |||| |||||    
T  22323672 ttcatgacatgtatatttggatcactctggtttatattccgctgcgactgttgaagtttatatacatgtttatgtttattggttttgaaatttgtatgtg 22323771  T
Q  562 gcgtagcctctatttcttgaataaat 587  Q
     |||||||| |||||||| |||||||    
T  22323772 acgtagcctttatttcttaaataaat 22323797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 503 - 597
Target Start/End: Original strand, 9951193 - 9951287
Alignment:
Q  503 ttccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||| | ||||||||||||||||||||  |||||| |||||||||||| ||| || |||||||| |||||||||||||||| |||| ||||    
T  9951193 ttccgctgctaatgttgaggtttatatacatgcttattgg-ttttgaattttggatgatgacgtagcctttatttcttgaataaatgtattattcg 9951287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 597
Target Start/End: Original strand, 16875096 - 16875195
Alignment:
Q  501 tattccgctgcaactgttgaggtttatatacatgtcta---ttggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||||||| |||||||||||   ||  ||||| ||||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  16875096 tattccgctgtaactgttgaggtttacatacatgtctatcgttttttttttaattttgaataagacgtaatctctatttcttgaataaatgtattattcg 16875195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 20569035 - 20569159
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    |||||||||| |||| |||||| ||||||||||| |||| |||||||| ||||||| |||||| || |||||||  | |||||  || || |||| | ||    
T  20569035 acatgtatattttgagtactctcgtttatattccactgcgactgttgaagtttatacacatgttta-tggttttgaatttttgtgtgatgacgtaacatc 20569133  T
Q  572 tatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||| ||||    
T  20569134 tatttcttgaataaatgtattattcg 20569159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 20575228 - 20575352
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    |||||||||| |||| |||||| ||||||||||| |||| |||||||| ||||||| |||||| || |||||||  | |||||  || || |||| | ||    
T  20575228 acatgtatattttgagtactctcgtttatattccactgcgactgttgaagtttatacacatgttta-tggttttgaatttttgtgtgatgacgtaacatc 20575326  T
Q  572 tatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||| ||||    
T  20575327 tatttcttgaataaatgtattattcg 20575352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 592
Target Start/End: Original strand, 19995418 - 19995467
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  19995418 ttttgaattttgaatgatggcgtagcctctatttcttgaacaaatgtatt 19995467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 597
Target Start/End: Original strand, 20656225 - 20656331
Alignment:
Q  491 ctctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatat 589  Q
    |||| |||||||||||||| | |||||||| ||||||||| |||| || |||||||  | ||||| ||| || |||| | |||||||||||||||||| |    
T  20656225 ctctggtttatattccgctacgactgttgaagtttatatatatgttta-tggttttgaatttttgtatgatgacgtaacatctatttcttgaataaatgt 20656323  T
Q  590 attcttcg 597  Q
    ||| ||||    
T  20656324 attattcg 20656331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 19995332 - 19995386
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||| |||||||||| |  |||||||| |||||||||||||||| |||||||||    
T  19995332 ttcatgacatgtatatttgtattactctggtttatattccgctgcgactgttgag 19995386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 21 - 407
Target Start/End: Original strand, 49046560 - 49046946
Alignment:
Q  21 actaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgtggt 120  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||  |||    
T  49046560 actaaagataattttgttaagaatgtccctaaaaggcatgtgcaaggttgtagtaatattgtggttgatgaagattctattattcttgacataataaggt 49046659  T
Q  121 ctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggttcaatcaac 220  Q
     |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| | |  || || ||||||||||    
T  49046660 ttaagaaagtaacaactaatgtgttggtgggtgatgttataaaccttgaggaagaactatattctaactcttccgttggggcaattcagtttcaatcaac 49046759  T
Q  221 gcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgacggac 320  Q
     |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||  |||||||||||||  || |||||||| || ||||||||| |||    
T  49046760 acatgttgaagcgatgactgaaatacaagttgaagaccaactgagcaacaaacttcttgatatgcgcatcgctggtccttggaatggcgttgtgacagac 49046859  T
Q  321 ttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaattctagcatt 407  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||| ||||||||||| ||| ||||    
T  49046860 ttagattataatcaagatcccccatcttggtatgatttatgttcttccaatttcatgatttctaaatatgttttaaatcctaacatt 49046946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 91 - 398
Target Start/End: Original strand, 26473688 - 26473995
Alignment:
Q  91 aagatcctattattcttgacataatgtggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcac 190  Q
    ||||||||||||||||||| |||||| | || ||||||||||||||  ||||||||||| | |||||| ||||| | |||||||||||||||| || |||    
T  26473688 aagatcctattattcttgatataatgagatccaaggaagtaacaacatatgtgttggtgagggatgttttaaacctcgaggaagaactatattttaccac 26473787  T
Q  191 ttccgttgagtctgtttaggttcaatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatc 290  Q
    |||| ||| | | | |  ||||||| || | ||||| | || ||||||||||| |||| |||||| |||||| |||||||||||||  || |||||||||    
T  26473788 ttccattggggcagctccggttcaaccaccacatgtggtagtgatgactgaaaaacaaagtgatgcccaacaaagcaacaaactttgagacatgcgcatc 26473887  T
Q  291 cttgatccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatg 390  Q
     ||| ||  |||||||||  | |||||||||||||||||||||||||||| |   ||||||||| |||| ||||||||||||||||||||| ||| || |    
T  26473888 gttggtcaatggagtgacactatgacggacttagattataatcaagatcctcagacttggtatgatttaagttcttccaatgtcatggtttctaaggacg 26473987  T
Q  391 ttttaaat 398  Q
    ||||||||    
T  26473988 ttttaaat 26473995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 91 - 398
Target Start/End: Original strand, 26550128 - 26550435
Alignment:
Q  91 aagatcctattattcttgacataatgtggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcac 190  Q
    ||||||||||||||||||| |||||| | || ||||||||||||||  ||||||||||| | |||||| ||||| | |||||||||||||||| || |||    
T  26550128 aagatcctattattcttgatataatgagatccaaggaagtaacaacatatgtgttggtgagggatgttttaaacctcgaggaagaactatattttaccac 26550227  T
Q  191 ttccgttgagtctgtttaggttcaatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatc 290  Q
    |||| ||| | | | |  ||||||| || | ||||| | || ||||||||||| |||| |||||| |||||| |||||||||||||  || |||||||||    
T  26550228 ttccattggggcagctccggttcaaccaccacatgtggtagtgatgactgaaaaacaaagtgatgcccaacaaagcaacaaactttgagacatgcgcatc 26550327  T
Q  291 cttgatccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatg 390  Q
     ||| ||  |||||||||  | |||||||||||||||||||||||||||| |   ||||||||| |||| ||||||||||||||||||||| ||| || |    
T  26550328 gttggtcaatggagtgacactatgacggacttagattataatcaagatcctcagacttggtatgatttaagttcttccaatgtcatggtttctaaggacg 26550427  T
Q  391 ttttaaat 398  Q
    ||||||||    
T  26550428 ttttaaat 26550435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 2024441 - 2024297
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||||| |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  2024441 atgtaatttattgattcatgacatgtatatgttgattactctggtttatattccactgcgactgttgaggtttatatacatgtttattggtttttgaatt 2024342  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||    
T  2024341 ttgaatgtggcgtagcctctttttcttgaataaatgtattattcg 2024297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 32496669 - 32496813
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||    
T  32496669 atgtaatttattacttcataacatgtatatgttgattactatggtttatattccgattcaactgttgaggtttatatacatgtttattgatttttgaatt 32496768  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||    
T  32496769 ttgaatatggcgtagcctctatttcttgaataaatgtattattcg 32496813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 13039352 - 13039498
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13039352 atgtaatttattgattcatgacatgtatatatttggattaccctagtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaa 13039451  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  13039452 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 13039498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 7290653 - 7290510
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  |||||||| ||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  7290653 atgtaatttatta-ttcataacgtgtatatttggattactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaatt 7290555  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  7290554 ttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 7290510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 368889 - 368744
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||| |||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  368889 atgtaatttatttattcttaacatgtatat-ttgaatttactctagtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 368791  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  368790 ttttgaatgtggcgtaacctctatttcttgaataaatgtattattcg 368744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 11583060 - 11583206
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| | |||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11583060 atgtaatttattgattcatgatatgtatatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaa 11583159  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11583160 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 11583206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 15953305 - 15953450
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  15953305 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttgaa 15953403  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  15953404 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 15953450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 15858738 - 15858598
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  15858738 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattcctctgcgactgttgaggtttatatacatgtttattggtttttgaa 15858640  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15858639 ttttgaatgtggcgtagcctctatttcttgaataaatgtatt 15858598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 2193051 - 2193196
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  2193051 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaat 2193150  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  2193151 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 2193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 122551 - 122405
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||  ||||| |||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  122551 atgtgatttattgattcatgacatgtatatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgttatttggtttttgaa 122452  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  122451 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 122405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 6320996 - 6321141
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  6320996 atgtaatttatttattcataacatgtatat-ttgaatttactcttgtttatattccgctgcgactgttgatgtttatatacatgtttattggtttttgaa 6321094  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| | |||||||||||||||||||||||| |||| ||||    
T  6321095 ttttgaatgttgtgtagcctctatttcttgaataaatgtattattcg 6321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 489 - 597
Target Start/End: Original strand, 1938881 - 1938989
Alignment:
Q  489 tactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaata 588  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1938881 tactctggtttatattctgctgcaactattgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatg 1938980  T
Q  589 tattcttcg 597  Q
    |||| ||||    
T  1938981 tattattcg 1938989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 3054748 - 3054602
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||||| ||||||| || ||  ||||||||| ||||||||| |   |||||||||||||||||||||||||| ||||||||||||||    
T  3054748 atgtaatttatttattcatgacatgtacatatttggattactctggtttatatttcatggcaactgttgaggtttatatacatgtttattggtttttgaa 3054649  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  3054648 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 3054602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 7286801 - 7286912
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  7286801 gattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgcaacctctatttcttgaataa 7286900  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  7286901 atgtattattcg 7286912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 467 - 592
Target Start/End: Original strand, 113415 - 113543
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattgg---tttttgaattttgaatgtggc 563  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| | ||||||   ||||||||||||||||||||     
T  113415 ttcataacatgtatatgttgattactctggtttatattctgatgcaactgttgaggtttatatacatatttattggttttttttgaattttgaatgtggg 113514  T
Q  564 gtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||||| ||||    
T  113515 gtagcctctatttcttgaataaatgtatt 113543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 36050997 - 36050856
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  36050997 atgtaatttattgattcatgacatgtacatattttgattactctggtttatatttcgctgcaactgttgaggtttatatacatgtttattggtttttaaa 36050898  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||||| |||| ||||||| ||||    
T  36050897 ttttgaatgtggcgtagcctctatatcttaaataaatgtatt 36050856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 2435596 - 2435483
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2435596 ttgatcactctgatttatattccgctgcaactgttgaggtttatataaatgtctatcggtttttgaattttgaatgtggcgtagcctctatttcttgaat 2435497  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  2435496 aaatgtattattcg 2435483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 467 - 587
Target Start/End: Original strand, 12546068 - 12546189
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||||||||||||||||||| |||||| |||||||||||||| | ||| |||| |||||||||||||| ||||||||||||||||||| ||| ||||||    
T  12546068 ttcataacatgtatatgttgagtactctggtttatattccgctacgactattgaagtttatatacatgtttattggtttttgaattttggatgatggcgt 12546167  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||||||||||||||||||||||    
T  12546168 agcctctatttcttgaataaat 12546189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 7287469 - 7287580
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||| |||    
T  7287469 gattattctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgcaacctctatttcttgattaa 7287568  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  7287569 atgtattattcg 7287580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 467 - 592
Target Start/End: Complemental strand, 3893126 - 3893001
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||| ||| ||||||    
T  3893126 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgagatttatatacatgtttattgg-ttttgaattttggatgatggcgt 3893028  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||| ||||    
T  3893027 agcctctatttcttgaataaatgtatt 3893001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 26072394 - 26072525
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| | |||||| |||||||||||||| ||||||||||  | ||||| ||| ||||||    
T  26072394 ttcatgacatgtatatgttgagtactctggtttatattccgctgcgattgttgaagtttatatacatgtttattggttttgaatttttgtatgatggcgt 26072493  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  26072494 agcctctatttcttgaataaatgtattattcg 26072525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 26096181 - 26096312
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| | |||||| |||||||||||||| ||||||||||  | ||||| ||| ||||||    
T  26096181 ttcatgacatgtatatgttgagtactctggtttatattccgctgcgattgttgaagtttatatacatgtttattggttttgaatttttgtatgatggcgt 26096280  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  26096281 agcctctatttcttgaataaatgtattattcg 26096312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 12752912 - 12752782
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||| ||| || |||    
T  12752912 ttcatgacatgtatattttgagtactctggtttatattccgctgcaactgttgaagtttatatacatgttta-tggttttggaattttgtatgatgacgt 12752814  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  12752813 agcatctatttcttgaataaatgtattattcg 12752782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 479 - 597
Target Start/End: Original strand, 48624502 - 48624619
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||  |||||||||||||| || |||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||    
T  48624502 atattttgatcactctgatttatattccgctgtaaatgttgaggtttatatacatgtctatccgtttt-gaattttgaatgtggcgtaacctctatttct 48624600  T
Q  579 tgaataaatatattcttcg 597  Q
    ||||||||| |||| ||||    
T  48624601 tgaataaatgtattattcg 48624619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 12113757 - 12113644
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||||    
T  12113757 ttgatcactctgatttatattccgttgtgactgttgaggtttatatacatgtctattggtttttgaattttgaatatgacgtaatctctatttcttgaat 12113658  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  12113657 aaatgtattattcg 12113644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 18982150 - 18982250
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| || ||||  ||||||||||||||||||| |||| |||    
T  18982150 tttatattccgctgcgactgttgaagtttatatacatgtctatcggtttttgaattttgaatatgacgtaatctctatttcttgaataaatgtattattc 18982249  T
Q  597 g 597  Q
    |    
T  18982250 g 18982250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 15824631 - 15824761
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    |||||||||||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||   || || |||    
T  15824631 ttcataacatgtatatttggattactctggtttatattccgctgcgactgttgagatttatatacatgtttattgg-ttttgaatttttgttgatgacgt 15824729  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    | |||||||||||||||||||| |||| ||||    
T  15824730 aacctctatttcttgaataaatgtattattcg 15824761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 474 - 597
Target Start/End: Original strand, 26011334 - 26011456
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctcta 573  Q
    ||||||||| ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||    
T  26011334 catgtatat-ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctcta 26011432  T
Q  574 tttcttgaataaatatattcttcg 597  Q
    |||||||||||||| |||| ||||    
T  26011433 tttcttgaataaatgtattattcg 26011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 7820934 - 7820821
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  7820934 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 7820835  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  7820834 aaatgtattattcg 7820821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 7828245 - 7828132
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  7828245 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 7828146  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  7828145 aaatgtattattcg 7828132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 11514133 - 11514020
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  11514133 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 11514034  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  11514033 aaatgtattattcg 11514020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 13913268 - 13913381
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  13913268 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 13913367  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  13913368 aaatgtattattcg 13913381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 15443712 - 15443825
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  15443712 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 15443811  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  15443812 aaatgtattattcg 15443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 16416226 - 16416113
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16416226 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16416127  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16416126 aaatgtattattcg 16416113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 27103699 - 27103812
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  27103699 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 27103798  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  27103799 aaatgtattattcg 27103812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 27111047 - 27111160
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  27111047 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 27111146  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  27111147 aaatgtattattcg 27111160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 27174626 - 27174513
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  27174626 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 27174527  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  27174526 aaatgtattattcg 27174513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 42060445 - 42060558
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  42060445 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 42060544  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  42060545 aaatgtattattcg 42060558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 467 - 598
Target Start/End: Original strand, 13875212 - 13875343
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||||| || |||||||  | ||||| ||| ||||||    
T  13875212 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatggcgt 13875310  T
Q  566 agcctctatttcttgaataaatatattcttcga 598  Q
    || ||||||||||||||||||| |||| |||||    
T  13875311 agtctctatttcttgaataaatgtattattcga 13875343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 30264250 - 30264390
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||||    
T  30264250 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaacggttgaggtttacatacatgtctatcggtttttgaattttga 30264349  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  30264350 ataagacgtaatctctatttcttgaataaatgtattattcg 30264390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 15519026 - 15519128
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttt--tgaattttgaatgtggcgtagcctctatttcttgaataaatatattct 594  Q
    |||||||||| ||| |||||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||||||||||||||||| || |||| |    
T  15519026 tttatattccactgtaactgttgaggtttatatacatgtctatcgttttttttgaattttgaatgtggcgtaacctctatttcttgaatagatgtattat 15519125  T
Q  595 tcg 597  Q
    |||    
T  15519126 tcg 15519128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 467 - 587
Target Start/End: Complemental strand, 44863210 - 44863089
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||| ||| |||||||||||||||| ||| |||| |||||||||||||| ||||||||||  | |||||  || ||||||    
T  44863210 ttcatgacatgtatatttggattattctggtttatattccgctgcgactattgaagtttatatacatgtttattggttttgaatttttgtttgatggcgt 44863111  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||||||||||||||||||||||    
T  44863110 agcctctatttcttgaataaat 44863089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 16481128 - 16481204
Alignment:
Q  521 ggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||| ||||    
T  16481128 ggtttatatacatgtttattggtttttgaatattgaatgtagcgtagcctctatttcttgaataaatgtattattcg 16481204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 513 - 597
Target Start/End: Complemental strand, 13174208 - 13174122
Alignment:
Q  513 actgttgaggtttatataca--tgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||  | | |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  13174208 actgttgaggtttatatacacatatttattggtttttggattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 13174122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 474 - 597
Target Start/End: Original strand, 25294421 - 25294544
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctcta 573  Q
    ||||||||| ||||| |||||  ||||||||||||||| ||||| || ||| || ||||||||||| ||||||||||||||||||  | ||||  |||||    
T  25294421 catgtatatattgatcactctgatttatattccgctgcgactgtcgaagttcatgtacatgtctatcggtttttgaattttgaataagacgtaatctcta 25294520  T
Q  574 tttcttgaataaatatattcttcg 597  Q
    |||||||||||||| |||| ||||    
T  25294521 tttcttgaataaatgtattattcg 25294544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 37939298 - 37939185
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| ||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  37939298 ttgatcactctgatttgtattccgttgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 37939199  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  37939198 aaatgtattattcg 37939185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 597
Target Start/End: Original strand, 38785820 - 38785913
Alignment:
Q  504 tccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  38785820 tccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattcg 38785913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 484 - 592
Target Start/End: Original strand, 48759241 - 48759349
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||  | ||||  |||||||||||||||    
T  48759241 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtatttgaattttgaataagacgtaatctctatttcttgaat 48759340  T
Q  584 aaatatatt 592  Q
    |||| ||||    
T  48759341 aaatgtatt 48759349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 10987620 - 10987506
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg-gtttttgaattttgaatgtggcgtagcctctatttcttgaa 582  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||||||||||  | ||||  ||||||||||||||    
T  10987620 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcgtttttttgaattttgaataagacgtaatctctatttcttgaa 10987521  T
Q  583 taaatatattcttcg 597  Q
    ||||| |||| ||||    
T  10987520 taaatctattattcg 10987506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 45455840 - 45455971
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||| | ||| |||| |||||| |||||||||||||||| |||||||| |||||||||||||| |||   ||||| | ||||| ||| || |||    
T  45455840 ttcatgacatatgtattttgagtactctggtttatattccgctgcgactgttgaagtttatatacatgtttatgattttttaatttttgtatgatgacgt 45455939  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||| ||||||| |||| ||||    
T  45455940 agcctctatttcttaaataaatgtattattcg 45455971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 512 - 597
Target Start/End: Original strand, 13250375 - 13250460
Alignment:
Q  512 aactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||  | | ||  ||||||||||||||||||| |||| ||||    
T  13250375 aactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacataatctctatttcttgaataaatgtattattcg 13250460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 544 - 597
Target Start/End: Complemental strand, 19666363 - 19666310
Alignment:
Q  544 ttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  19666363 ttttgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 19666310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 10261996 - 10261881
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggttttt--gaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  ||| ||||||| || ||||||||||||||| |||||||||||| | |||||  |||||||||||| | ||||  |||||||||||||    
T  10261996 ttgatcactctgatttgtattccgttgtaactgttgaggtttacatacatgtctatcgttttttttgaattttgaatgagacgtaatctctatttcttga 10261897  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  10261896 ataaatgtattattcg 10261881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 11285077 - 11284947
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||||  ||||||||| ||||||| ||||  | || |  ||||||||||||||| || |||    
T  11285077 ttcatgacatgtatatttggagtactctggtttatattccgctgtgactgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatgacgt 11284979  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  11284978 agcatctatttcttgaataaatgtattattcg 11284947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 18306097 - 18306227
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||| |||||| |||||||||||||||| ||| ||||| ||||||| |||| ||  | |  ||||||||||||||| || |||    
T  18306097 ttcatgacatgtatattttgagtactctggtttatattccgctgcgactattgagatttatatgcatg-cttgttgagtttgaattttgaatgatgacgt 18306195  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    | | |||||||||||||||||| |||| ||||    
T  18306196 aacatctatttcttgaataaatgtattattcg 18306227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 597
Target Start/End: Complemental strand, 13756568 - 13756470
Alignment:
Q  501 tattccgctgcaactgttgaggtttatatacatgtctat--tggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||||||| ||||||||||||  |  ||||| ||||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  13756568 tattccgctgtaactgttgaggtttacatacatgtctatcgtttttttttaattttgaataagacgtaatctctatttcttgaataaatgtattattcg 13756470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 13845151 - 13845281
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| || | |||| | ||| |||||||||||| ||||||||| ||||||| ||||| | || |  ||||||||||||||| || |||    
T  13845151 ttcatgacatgtatattttaagtactttggttcatattccgctgcgactgttgagatttatatgcatgtatgtt-gaatttgaattttgaatgatgacgt 13845249  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||  |||||||||||||||||| |||| ||||    
T  13845250 agaatctatttcttgaataaatgtattattcg 13845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 16209705 - 16209646
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggttt 545  Q
    ||||||||| ||||||||||||||| || ||| ||||||||||||||||| |||||||||    
T  16209705 gattactctggtttatattccgctgtaattgtcgaggtttatatacatgtttattggttt 16209646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 544 - 597
Target Start/End: Complemental strand, 141521 - 141467
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  141521 ttttgaattttgaatgatggcgtagcctctatttcttgaataaatgtattattcg 141467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 467 - 592
Target Start/End: Original strand, 12250204 - 12250329
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||| ||||||| ||||||||| ||||||| ||||  | |||  |||||||||||||| | |  |||    
T  12250204 ttcatgacatgtatatttggagtactctggtttatat-ccgctgcgactgttgagatttatatgcatggatgttgagttttgaattttgaaagataacgt 12250302  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    ||| |||||||||||||||||| ||||    
T  12250303 agcatctatttcttgaataaatgtatt 12250329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 408
Target Start/End: Original strand, 3998 - 4385
Alignment:
Q  21 actaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataatgtggt 120  Q
    |||||| |||||||| |||||||||||| |||||| |||| |||||||||||||||||||||| ||||| ||||||||||||| | |||||||||  |||    
T  3998 actaaagataatcttattaagaatgtccttaaaaggcatgtgcaaggctgtagtaatattgtgtttgatgaagatcctattatccgtgacataataaggt 4097  T
Q  121 ctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggttcaatcaac 220  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | | ||| ||||| |||||||    
T  4098 ctaaggaagtaacaactaatgtgttggtgggtgatgttataaaccttgaggaagaactattttctagcacttccgttggggcagttcaggttaaatcaac 4197  T
Q  221 gcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgacggac 320  Q
       ||||||||| |||| ||||||||||||||  |||||||| |||||| || || |||||||||||||| ||| | ||||||||||||||||||   ||    
T  4198 atctgttgaagctatgattgaaatacaaggtgtagaccaacaaagcaacgaatttcctgatatgcgcatcgttggtacttggagtgacgttgtgataaac 4297  T
Q  321 ttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaattctagcattg 408  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||| |||||    
T  4298 ttagattataatcaagattccccatcttggtatggtttaggttcttccaatgtcatggtttctaaagaggttttaaatcctaacattg 4385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 21 - 410
Target Start/End: Original strand, 20424564 - 20424962
Alignment:
Q  21 actaaatataatcttgttaagaatgtccctaaaagacatgagcaaggctgtagta---------atattgtgcttgataaagatcctattattcttgaca 111  Q
    |||||| ||||||||||||||||| |||||||||| |||  ||||||||||||||         ||||||||  |||| ||||||||||||||| |||||    
T  20424564 actaaagataatcttgttaagaatatccctaaaaggcatttgcaaggctgtagtattgtggctaatattgtggctgatgaagatcctattattcgtgaca 20424663  T
Q  112 taatgtggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggt 211  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  || ||||    
T  20424664 taatgaggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaaccttgaggaagaactatattctagcacttccgttgaggcaattcaggt 20424763  T
Q  212 tcaatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgtt 311  Q
    ||||||||| | ||||||||  |||||||||| ||||||||  |||||||| ||||||||| || |||||||||||||  ||| | |||||||||||| |    
T  20424764 tcaatcaacacctgttgaaggtatgactgaaacacaaggtgtagaccaacaaagcaacaaatttcctgatatgcgcatagttggttcttggagtgacgct 20424863  T
Q  312 gtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaattctagcattgct 410  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||| |||||||    
T  20424864 gtgacagacttagactataatcaagatcccccatcttggtatggtttaggttcttccaatgtcatggtttctaaagaggttttaaatcctaacattgct 20424962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 139 - 398
Target Start/End: Complemental strand, 27941952 - 27941693
Alignment:
Q  139 atgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggttcaatcaacgcatgttgaagcgatgac 238  Q
    |||||| |||| | |||||||||||| |||||||| |||||||||||| ||||||||||| | | | | |||||||| || | ||||| | || ||||||    
T  27941952 atgtgtaggtgagggatgttataaactttgaggaataactatattctaccacttccgttggggcagctcaggttcaaccaccacatgtggtagtgatgac 27941853  T
Q  239 tgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgacggacttagattataatcaagat 338  Q
    ||||| |||| ||||||||||||| ||||| |||||| | ||||||| |||| ||| ||  |||||||||| ||||||||||||||||||||||||||||    
T  27941852 tgaaacacaaagtgatgaccaacaaagcaataaacttccagatatgcacatcgttggtctgtggagtgacgctgtgacggacttagattataatcaagat 27941753  T
Q  339 cccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaat 398  Q
    || |   |||||||||  ||| ||||||||||||||||||||| ||| ||||||||||||    
T  27941752 cctcagccttggtatgagttaagttcttccaatgtcatggtttctaaggatgttttaaat 27941693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 1222080 - 1222225
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  1222080 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 1222178  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  1222179 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 1222225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 9733033 - 9733178
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||| |||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  9733033 atgtaatttatttattcttaacatgtatat-ttgaatttactctagtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 9733131  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9733132 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 9733178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 10780558 - 10780703
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  10780558 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttgaa 10780656  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  10780657 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 10780703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 29193112 - 29193257
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||| |||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  29193112 atgtaatttatttattcttaacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 29193210  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29193211 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 29193257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 35793600 - 35793745
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  35793600 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaat 35793699  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  35793700 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 35793745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 23512782 - 23512638
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||| ||||||||||||||||||||| || ||| |||| ||||| ||||| |||||||| |||||||||||||| ||||||||||||||||    
T  23512782 atgtaatttatttattcataacatgtatatgttgagtaatctggtttgtattctgctgcgactgttgaagtttatatacatgtttattggtttttgaatt 23512683  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  23512682 ttgaatgtggcatagcctctatttcttgaataaatgtattattcg 23512638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 25212250 - 25212380
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25212250 ttcatgacatgtatatttggattactctggtttatattctgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgta 25212349  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  25212350 gcctctatttcttgaataaatgtattattcg 25212380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 25276402 - 25276532
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25276402 ttcatgacatgtatatttggattactctggtttatattctgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgta 25276501  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  25276502 gcctctatttcttgaataaatgtattattcg 25276532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 111409 - 111554
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  111409 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaat 111508  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||    
T  111509 tttgaatgtgacgtagcctctatttcttgaataaatgtattattcg 111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 11579674 - 11579529
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    |||| |||||||| |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  11579674 atgtgatttatttattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaat 11579575  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||    
T  11579574 tttgaatgtggcatagcctctatttcttgaataaatgtattattcg 11579529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 10053 - 9908
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  |||||||    
T  10053 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgaattttgaa 9955  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||    
T  9954 ttttgaatgtggagtagcctctatttcttgaataaatgtattattcg 9908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 585
Target Start/End: Original strand, 25944991 - 25945125
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25944991 atgtaatttattgattcatgacatgtacatattttaattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaa 25945090  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||||||||||||||||||||||| |||||    
T  25945091 ttttgaatgtggcgtagcctctatttcttaaataa 25945125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 28257522 - 28257392
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28257522 ttcatgacatgtatatttggattactctggtttatattccgctgcgattgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgta 28257423  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
     |||||||||||||||||||| |||| ||||    
T  28257422 acctctatttcttgaataaatgtattattcg 28257392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 11340344 - 11340199
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||    
T  11340344 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactattgaggtttatatacatgtttattgatttttgaat 11340245  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||    
T  11340244 tttgaatgtggcgtagcctctatttcttaaataaatgtattattcg 11340199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 18780490 - 18780635
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||| | |||||||| |||||||||||||| |||||||||||||||    
T  18780490 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctacgactgttgaagtttatatacatgtttattggtttttgaat 18780589  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||    
T  18780590 tttgaatgtggagtagcctctatttcttgaataaatgtattattcg 18780635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 17474143 - 17474287
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||| ||||||||||||||||||||||| |||  ||||| |||    
T  17474143 atgtaatttatttattcataacatgtatat-ttgaatttactctagtttatattctgctgcgactgttgaggtttatatacatgtttatccgtttt-gaa 17474240  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  17474241 ttttgaatgtggcgtagactctatttcttgaataaatgtattattcg 17474287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 19497686 - 19497541
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||| ||| ||||  ||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  19497686 atgtaatttatttattcataacatgtgtat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatacacatgtttattggtttttgaa 19497588  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||| || |||| |||||||||||||||||||| |||| ||||    
T  19497587 ttttgaatatgacgtaacctctatttcttgaataaatgtattattcg 19497541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 497 - 592
Target Start/End: Complemental strand, 24470276 - 24470181
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  24470276 tttatattctgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgcatgtggcgtagcctctatttcttgaataaatgtatt 24470181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 467 - 592
Target Start/End: Complemental strand, 21392169 - 21392044
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||| ||||| | ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||  | ||||||||||| ||||    
T  21392169 ttcatgacatatatatttggattactctggtttatattccgctgcaactgttgaagtttatatacatgtttattggttttgaatttttgaatgtgacgta 21392070  T
Q  567 gcctctatttcttgaataaatatatt 592  Q
    ||||||||||||||||||||| ||||    
T  21392069 gcctctatttcttgaataaatgtatt 21392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 453 - 586
Target Start/End: Original strand, 22885485 - 22885619
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||    
T  22885485 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccactgcgactgttgaggtttatgtacatgtctatcggtttttgaa 22885583  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaa 586  Q
    |||||||| || ||||  ||||||||||||||||||    
T  22885584 ttttgaatatgacgtaatctctatttcttgaataaa 22885619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 496 - 597
Target Start/End: Original strand, 1171474 - 1171578
Alignment:
Q  496 gtttatattccgctgcaactgttgaggtttatatacatgtctattggtttt---tgaattttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1171474 gtttatattccgctgcgactgttgaggtttatatacatgtttattggttttttatgaattttgaatgtggcgtagcctctatttcttgaataaatgtatt 1171573  T
Q  593 cttcg 597  Q
     ||||    
T  1171574 attcg 1171578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 486 - 587
Target Start/End: Complemental strand, 23509981 - 23509880
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||| | |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  23509981 gattactttggtttatattccgctgcaactattgaggtttatatacatgtttatcggtttttgaattctgaatgtggcgtagcctatatttcttgaataa 23509882  T
Q  586 at 587  Q
    ||    
T  23509881 at 23509880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 479 - 597
Target Start/End: Original strand, 23442259 - 23442376
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||    
T  23442259 atattttgatcactctgatttatattccgctgtaactgttgaggtttatatacatgtctatctgtttt-gaattttgaatgtggcgtaacctctatttct 23442357  T
Q  579 tgaataaatatattcttcg 597  Q
    ||||||||| |||| ||||    
T  23442358 tgaataaatgtattattcg 23442376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 4863293 - 4863163
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||| ||||| |||||||||||||||| |||||||| |||||||||||||| || ||||||||||| |||| ||| ||||||    
T  4863293 ttcatgacatgtatatttggatcactctggtttatattccgctgcgactgttgaagtttatatacatgttta-tggtttttgaactttggatgatggcgt 4863195  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  4863194 agcctctatttcttgaataaatgtattattcg 4863163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 27186393 - 27186539
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||  ||||||| | |||||||||||||| |||||||||| |||||||||||||| |||| |||||||||    
T  27186393 atgtaatttattgattcatgacatgtatatatttggattactttggtttatattccgctacaactgttgaagtttatatacatgtttattagtttttgaa 27186492  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||  |||| ||||| ||||||||| ||||||| |||| ||||    
T  27186493 ttttgaacatggcatagccactatttcttaaataaatgtattattcg 27186539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 7423614 - 7423501
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| || ||||  |||||||||||||||    
T  7423614 ttgatcactctgatttatattccgctgcgactgttgaagtttatatacatgtctatcggtttttgaattttgaatatgacgtaatctctatttcttgaat 7423515  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  7423514 aaatgtattattcg 7423501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 25424391 - 25424278
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | |||| ||||||||||||||||    
T  25424391 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaacctctatttcttgaat 25424292  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  25424291 aaatgtattattcg 25424278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 20594493 - 20594353
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    |||||||| |||||  ||||||||| || ||| |||||| |||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||    
T  20594493 atttatttgttcatggcatgtatatatttgatcactctaatttatattccgctgtaactgttgaggtctacatacatgtctatcggtttttgaattttga 20594394  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  20594393 ataagacgtaatctctatttcttgaataaatgtattattcg 20594353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 20710515 - 20710385
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| ||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||  ||| || |||    
T  20710515 ttcatgacatgtatatttggattactctggtt-atattctgctgcgactgttgaggtttatatacatgtttattggtttttgaattttagatgatgacgt 20710417  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  20710416 agcttctatttcttgaataaatgtattattcg 20710385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 21647200 - 21647090
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||  ||||||||| ||||||||||||| | |||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  21647200 gattactctggtttatattccgcaacaactgttgtggtttatatacatatttattggtttt-gaattttgaatgtggtgtagcctttatttcttgaataa 21647102  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  21647101 atgtattattcg 21647090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21922346 - 21922459
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  21922346 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 21922445  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21922446 aaatgtattattcg 21922459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21934428 - 21934541
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  21934428 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 21934527  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21934528 aaatgtattattcg 21934541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21940598 - 21940711
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  21940598 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 21940697  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21940698 aaatgtattattcg 21940711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 37011432 - 37011545
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  37011432 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 37011531  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  37011532 aaatgtattattcg 37011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 37050993 - 37050880
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  37050993 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 37050894  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  37050893 aaatgtattattcg 37050880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 43446194 - 43446308
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttg-aattttgaatgtggcgtagcctctatttcttgaa 582  Q
    ||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||  | ||||  ||||||||||||||    
T  43446194 ttgatcactctgatttatattccgctgcgactgttgaggtttatatacatgtctatcggtttttgaaattttgaataagacgtaatctctatttcttgaa 43446293  T
Q  583 taaatatattcttcg 597  Q
    ||||| |||| ||||    
T  43446294 taaatgtattattcg 43446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 4202237 - 4202350
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  4202237 ttgatcactctgatttatattccgatgcgactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 4202336  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  4202337 aaatgtattattcg 4202350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21075756 - 21075869
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  21075756 ttgatcactctgatttatattccgctgcgactgttgaagttcatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 21075855  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21075856 aaatgtattattcg 21075869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 467 - 587
Target Start/End: Original strand, 23986622 - 23986742
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||  | ||||| ||| || | |    
T  23986622 ttcatgacatgtatatttggattactctagtttatatttcgctgcgactgttgaggtttatatacatgttta-tggttttgaacttttgtatgatgacat 23986720  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||||||||||||||||||||||    
T  23986721 agcctctatttcttgaataaat 23986742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 25902594 - 25902707
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  25902594 ttgatcactctgatttatattccgctgtaactgtcgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 25902693  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  25902694 aaatgtattattcg 25902707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 35580264 - 35580151
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  35580264 ttgatcactctgatttatattccgctgtaactattgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 35580165  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  35580164 aaatgtattattcg 35580151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 16534145 - 16534006
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  16534145 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttga 16534046  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
     |  | ||||  ||||||||||||||||||| |||| ||||    
T  16534045 -taagacgtaatctctatttcttgaataaatgtattattcg 16534006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 12402366 - 12402287
Alignment:
Q  319 acttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaat 398  Q
    |||| ||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  12402366 acttggattatattcaagatcccccgtcttggtatggtttgagttcttccaatgtcatggtttctaaagatgttttaaat 12402287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 597
Target Start/End: Original strand, 21235704 - 21235797
Alignment:
Q  504 tccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  21235704 tccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattcg 21235797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 22368947 - 22369060
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    |||||||||||  ||||||||||||||| || ||||||||||| |||||||||||| | |||||||||| |||||  | ||||  |||||||||||||||    
T  22368947 ttgattactctgatttatattccgctgcgaccgttgaggtttacatacatgtctatcgttttttgaattatgaataagacgtaatctctatttcttgaat 22369046  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  22369047 aaatgtattattcg 22369060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 23326962 - 23326849
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| || |||||||||||| |||||||||||||| ||||||||||||||||  | ||||  |||||||||||||||    
T  23326962 ttgatcactctgatttgtattccgctgtaattgttgaggtttacatacatgtctattgttttttgaattttgaataagacgtaatctctatttcttgaat 23326863  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  23326862 aaatgtattattcg 23326849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 597
Target Start/End: Original strand, 11213877 - 11213975
Alignment:
Q  498 ttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatttt-gaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    ||||||||||||||| ||||||||  || ||| ||||| |||| | ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||    
T  11213877 ttatattccgctgcatctgttgagaatt-tatgcatgt-tattcggttttgaatttttgaatgtggcgtagcctctatttcttgaataaatgtattattc 11213974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 11339069 - 11339199
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||| | ||||||||| ||||||| ||||  | || |  |||||||||| |||| || |||    
T  11339069 ttcatgacatgtatatttggagtactctggtttatattccgctacgactgttgagatttatatgcatgcatgtt-gagtttgaattttaaatgatgacgt 11339167  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    | |||||||||||| |||||||||||| ||||    
T  11339168 aacctctatttcttaaataaatatattattcg 11339199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 24594511 - 24594396
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtcta--ttggtttttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||   |  ||||||||||||||||  | ||||   ||||||||||||    
T  24594511 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctaccgttctttttgaattttgaataagacgtaatttctatttcttga 24594412  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  24594411 ataaatgtattattcg 24594396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 587
Target Start/End: Complemental strand, 19403555 - 19403442
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctct 572  Q
    ||||||||| | || |||||| |||||||||||||||| ||||||||| ||||||| ||||  | || |  ||||||||||||||| ||  ||| | |||    
T  19403555 catgtatatttggagtactctggtttatattccgctgcgactgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatgaagtaacatct 19403457  T
Q  573 atttcttgaataaat 587  Q
    |||||||||||||||    
T  19403456 atttcttgaataaat 19403442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 592
Target Start/End: Original strand, 24185421 - 24185522
Alignment:
Q  491 ctctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatat 589  Q
    |||| |||||||||||||||| |||||||| |||||||||||||  || |||||||  | ||||| ||| || |||| | || |||||||||||||||||    
T  24185421 ctctggtttatattccgctgcgactgttgaagtttatatacatggtta-tggttttgaatttttgtatgatgacgtaacatccatttcttgaataaatat 24185519  T
Q  590 att 592  Q
    |||    
T  24185520 att 24185522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 597
Target Start/End: Complemental strand, 27007992 - 27007891
Alignment:
Q  498 ttatattccgctgcaactgttgaggtttatatacatgtctattgg--tttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattctt 595  Q
    |||||||||||||  ||||||||| |||| ||||||||| || ||  ||||||||||||||||  | ||||  || |||||||||||||||| |||| ||    
T  27007992 ttatattccgctgtgactgttgagatttacatacatgtcaatcggtttttttgaattttgaataagacgtaatctttatttcttgaataaatgtattatt 27007893  T
Q  596 cg 597  Q
    ||    
T  27007892 cg 27007891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 592
Target Start/End: Complemental strand, 3671401 - 3671352
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||| ||| || |||||| |||||||||||||||||||||||    
T  3671401 ttttgaattttgtatgatgacgtagcatctatttcttgaataaatatatt 3671352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 7e-66; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 91 - 397
Target Start/End: Complemental strand, 43805625 - 43805325
Alignment:
Q  91 aagatcctattattcttgacataatgtggtctaaggaagtaacaactaatgtgttggtgggtgatgttataaacattgaggaagaactatattctagcac 190  Q
    |||||||||||||||||||||||||| | | ||||||||||||| |||||||| | |||| ||||||||||||| ||||||||||||||||||||||| |    
T  43805625 aagatcctattattcttgacataatgagatataaggaagtaacacctaatgtgcttgtggttgatgttataaaccttgaggaagaactatattctagccc 43805526  T
Q  191 ttccgttgagtctgtttaggttcaatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatc 290  Q
    ||||||||   | | | ||||||||||||| |||||||||||||||| ||||| |||| |||      |||| |||||  ||||| |||||||||||||     
T  43805525 ttccgttggagcagctcaggttcaatcaacacatgttgaagcgatgaatgaaaaacaaagtg------aacaaagcaatgaacttcctgatatgcgcatt 43805432  T
Q  291 cttgatccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatg 390  Q
     ||| |||||||||||||| |||||| ||||| ||||||| |||| ||||||| ||||||||||||||  |||||||||||||||| |||    ||||||    
T  43805431 gttggtccttggagtgacgctgtgacagacttggattatattcaatatcccccgtcttggtatggtttgagttcttccaatgtcattgttacccaagatg 43805332  T
Q  391 ttttaaa 397  Q
    |||||||    
T  43805331 ttttaaa 43805325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 20947369 - 20947514
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  20947369 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcaactgttgaggtttatgtacatgtttattggtttttgaa 20947467  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  20947468 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 20947514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 24498695 - 24498840
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  24498695 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 24498793  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  24498794 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 24498840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 37846585 - 37846731
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||||| ||||||| || ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  37846585 atgtaatttatttattcatgacatgtacatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattgatttttgaa 37846684  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  37846685 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 37846731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 44037006 - 44037152
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  44037006 atgtaatttattgattcatgacatgtacatattttgattactctagtttatattccgctgcaactgttgaagtttatatacatgtttattggtttttgaa 44037105  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  44037106 ttttgaatgtggcgtaacctctatttcttgaataaatgtattattcg 44037152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 460 - 592
Target Start/End: Complemental strand, 20252095 - 20251963
Alignment:
Q  460 ttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg 559  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||| ||| |||||||||||||||||||||||    
T  20252095 ttatttattcatgacatgtatatgttgattactctattttatattacgctgcgactgttgaagtttatatacttgtttattggtttttgaattttgaatg 20251996  T
Q  560 tggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||||||||| ||||    
T  20251995 tggcgtagcctctatttcttgaataaatgtatt 20251963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 22226016 - 22225876
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  22226016 atttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgaggtttatatacatgtctattag-ttttgaattttg 22225918  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  22225917 aatgtggcgtagcctctatttcttgaataaatgtattattcg 22225876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 208 - 398
Target Start/End: Complemental strand, 31288934 - 31288744
Alignment:
Q  208 aggttcaatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtga 307  Q
    |||||| ||||||  ||||||||||||||| |||||  ||| |||| ||| ||||||||||||||||| |||||||||||||  ||| ||||||||| ||    
T  31288934 aggttctatcaacaaatgttgaagcgatgaatgaaaagcaaagtgaagacaaacagagcaacaaacttcctgatatgcgcataattggtccttggagcga 31288835  T
Q  308 cgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaat 398  Q
    |  |||||| |||||  |||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||  ||||||||||||||||    
T  31288834 cactgtgacagacttgaattatattcaagatcccccgtcttggtatggtttgagttcttccaatgtcatggttactaaagatgttttaaat 31288744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 20895923 - 20896067
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga-ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  ||| | |||||||||| |||| ||||||| |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  20895923 atgtaatttattgattcttgacatgtatat-ttgatttactctggtttatattccgctgcgactgttgaggtttatatacatgttcattggtttttgaat 20896021  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  20896022 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 20896067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 488 - 597
Target Start/End: Complemental strand, 20929476 - 20929367
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20929476 ttactctggtttatattccgctgcaactgttgaggtttatatacatgtctatcggttattgaattttgaatgtggcgtagcctctatttcttgaataaat 20929377  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  20929376 gtattattcg 20929367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 21857518 - 21857372
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||||||||||| |||||| ||||||| ||  |  ||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  21857518 atgtaatttattgcttcatgacatgtacatacttggattattctggtttatattccgctgcaactgttgaggtttatatacatgttcattagtttttgaa 21857419  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  21857418 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 21857372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 22352031 - 22351886
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||    
T  22352031 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattctgctgcgactgttgatgtttatatacatgtttattggtttttgaa 22351933  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  22351932 ttttgaatgttgcgtagcttctatttcttgaataaatgtattattcg 22351886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 18505393 - 18505262
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  18505393 ttcatgacatgtatatttggattactctggtttatattccgttgcgactgatgaggtttatatacatgtttattggtttttgaattttgaatgatggcgt 18505294  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  18505293 agcctctatttcttgaataaatgtattattcg 18505262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 20529477 - 20529367
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20529477 gattactctggtttatattccgctgcaactgttgaggtttataaacatgtttattgg-ttttgaattttgaatgtggcgtagcctctatttcttgaataa 20529379  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  20529378 atgtattattcg 20529367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 467 - 587
Target Start/End: Complemental strand, 35052884 - 35052764
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||| ||||||    
T  35052884 ttcattacatgtatatgttgagtactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgg-ttctgaattttgaatgatggcgt 35052786  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||||||||||||||||||||||    
T  35052785 agcctctatttcttgaataaat 35052764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 22079939 - 22079795
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    |||| |||||||  ||||| |||||||||| |  |||||||| |||||||||||||| | ||||||||||||||||||||||| | ||| ||||||| ||    
T  22079939 atgtgatttattgattcatgacatgtatatttgtattactctggtttatattccgcttcgactgttgaggtttatatacatgttttttgttttttgattt 22079840  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  22079839 ttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 22079795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 487 - 597
Target Start/End: Complemental strand, 20443736 - 20443627
Alignment:
Q  487 attactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaa 586  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  20443736 attactctagtttatattccgttgcaactgttgaggtttatatacatgtttatt-gattttgaatttttaatgtggcgtagcctctatttcttgaataaa 20443638  T
Q  587 tatattcttcg 597  Q
    | |||| ||||    
T  20443637 tgtattattcg 20443627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 41217278 - 41217148
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    |||| ||||||||||| | |||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||    
T  41217278 ttcaaaacatgtatatttggattactctagtttatattccgctgtgactgttgagatttatatacatgtttattgg-ttttgaattttgaatgatggcgt 41217180  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    | | |||||||||||||||||| |||| ||||    
T  41217179 aacttctatttcttgaataaatgtattattcg 41217148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 488 - 597
Target Start/End: Complemental strand, 17146543 - 17146434
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    |||||||  ||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17146543 ttactctgctttatattctgctgcgactgttgaggtttatatacatgtttatttgtttttgaattttgaatgtggtgtatcctctatttcttgaataaat 17146444  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  17146443 gtattattcg 17146434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 490 - 597
Target Start/End: Original strand, 35935775 - 35935884
Alignment:
Q  490 actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttt--tgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||| ||||| ||||  |||||||||||||||| ||||||||||||||||||||||||    
T  35935775 actctggtttatattccgctgcgactgttgaggtttatatacctgtttattgttttttttgaattttgaatgtggtgtagcctctatttcttgaataaat 35935874  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  35935875 gtattattcg 35935884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 458 - 592
Target Start/End: Original strand, 9193786 - 9193921
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  9193786 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttga 9193885  T
Q  557 atgtggcgtagcctctatttcttgaataaatatatt 592  Q
    ||  | ||||  ||||||||||||||||||| ||||    
T  9193886 ataagacgtaatctctatttcttgaataaatgtatt 9193921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 5074460 - 5074573
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  5074460 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 5074559  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  5074560 aaatgtattattcg 5074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 17002831 - 17002718
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  17002831 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 17002732  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  17002731 aaatgtattattcg 17002718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 20827380 - 20827493
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  20827380 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 20827479  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  20827480 aaatgtattattcg 20827493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 51450618 - 51450505
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  51450618 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 51450519  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  51450518 aaatgtattattcg 51450505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 474 - 597
Target Start/End: Original strand, 5676802 - 5676925
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctct 572  Q
    ||||||||| | ||||||||| |||||||||  ||||| |||||||| |||||||||||||| |||||| |||||||||||| ||| || ||||||||||    
T  5676802 catgtatatttggattactctggtttatattatgctgcgactgttgaagtttatatacatgtttattgg-ttttgaattttgcatgatgacgtagcctct 5676900  T
Q  573 atttcttgaataaatatattcttcg 597  Q
    ||||||||||||||| |||| ||||    
T  5676901 atttcttgaataaatgtattattcg 5676925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 21652185 - 21652285
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| |||||||||| |||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||||||||||| |||    
T  21652185 tttatattccgctgtaactgttgagatttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatatattattc 21652284  T
Q  597 g 597  Q
    |    
T  21652285 g 21652285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 592
Target Start/End: Original strand, 24522213 - 24522321
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  24522213 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 24522312  T
Q  584 aaatatatt 592  Q
    |||| ||||    
T  24522313 aaatttatt 24522321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 22408425 - 22408556
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||  |||||| ||||||||||| |||| |||||||| |||||||||||||| ||||||||||  | ||||| ||| ||| ||    
T  22408425 ttcatgacatgtatattttgtgtactctggtttatattccactgcgactgttgaagtttatatacatgtttattggttttgaagttttgtatgatggtgt 22408524  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  22408525 agcctctatttcttgaataaatgtattattcg 22408556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 18062113 - 18062226
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  | ||||  || |||||||| |||    
T  18062113 ttgatcactctgatttatattccgctgcgactgttgaggtttatatacatgtctatcggtttttgaattttgaataggacgtaatctatatttcttaaat 18062212  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  18062213 aaatgtattattcg 18062226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 21206919 - 21207019
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| |||    
T  21206919 tttatactccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattc 21207018  T
Q  597 g 597  Q
    |    
T  21207019 g 21207019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 24570530 - 24570670
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    |||||||| |||||  ||||||||| || ||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||     
T  24570530 atttatttgttcatggcatgtatatatttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgt 24570629  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | | ||  ||||||||||||||||||| |||| ||||    
T  24570630 ataagacttaatctctatttcttgaataaatgtattattcg 24570670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 45049638 - 45049538
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    ||||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| |||    
T  45049638 tttatattccgttgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattc 45049539  T
Q  597 g 597  Q
    |    
T  45049538 g 45049538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 453 - 535
Target Start/End: Complemental strand, 22364691 - 22364608
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgt 535  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  22364691 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgt 22364608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 41392458 - 41392345
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| |||||||| ||| |||||||||||||| | ||||||||||||||||  | ||||  |||||||||||||||    
T  41392458 ttgatcactctgatttatattccgctgcgactgttgaagttcatatacatgtctatcgttttttgaattttgaataagacgtaatctctatttcttgaat 41392359  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  41392358 aaatgtattattcg 41392345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 18603231 - 18603331
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| |||||||||| |||| |||||||||||| |||||||||| |||||||  | ||||  ||||||||||||||||||| |||| |||    
T  18603231 tttatattccgctgtaactgttgagatttacatacatgtctatcggtttttgaaatttgaataagacgtaatctctatttcttgaataaatgtattattc 18603330  T
Q  597 g 597  Q
    |    
T  18603331 g 18603331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 20117325 - 20117425
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| |||||||||| |||| |||||||| ||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| |||    
T  20117325 tttatattccgctgtaactgttgagatttacatacatgtatatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattc 20117424  T
Q  597 g 597  Q
    |    
T  20117425 g 20117425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 49965858 - 49965727
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgt---ggc 563  Q
    ||||| |||||||||| ||||||||||| |||||||||| ||||| |||||||| |||||||||||||| |||  | ||||||||||| | | |   |||    
T  49965858 ttcatgacatgtatattttgattactctggtttatattctgctgcgactgttgaagtttatatacatgtttat--ggttttgaattttaattatgacggc 49965761  T
Q  564 gtagcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||||| |||| ||||    
T  49965760 gtaacctctatttcttgaataaatgtattattcg 49965727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 2423263 - 2423382
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    ||||||||||||||| |||||||||||||||      || |||||||| |||||||||||||| |||  | |||||||||||| ||| |||| |||||||    
T  2423263 acatgtatatgttgagtactctagtttatat------gcgactgttgaagtttatatacatgtttatatggttttgaattttggatgatggcatagcctc 2423356  T
Q  572 tatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||| ||||    
T  2423357 tatttcttgaataaatgtattattcg 2423382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 29136825 - 29136713
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||| |||||  ||||||||||||||||||||||||| | ||||||||||||||||| ||  |||  |||||||||||||||    
T  29136825 ttgatcactctgatttatattcagctgcggctgttgaggtttatatacatgtcta-tcgtttttgaattttgaatatgatgtaatctctatttcttgaat 29136727  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  29136726 aaatgtattattcg 29136713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 491 - 597
Target Start/End: Complemental strand, 21716151 - 21716045
Alignment:
Q  491 ctctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatat 589  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |  |||||||  | ||||| ||| || ||||||||||||||||||||||||| |    
T  21716151 ctctagtttatattccgctgcgactgttgaagtttatatacatgt-tgatggttttgaatttttgtatgatgacgtagcctctatttcttgaataaatgt 21716053  T
Q  590 attcttcg 597  Q
    ||| ||||    
T  21716052 attattcg 21716045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 592
Target Start/End: Complemental strand, 22033853 - 22033743
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattgg--tttttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  |||||||||||||| |||||||||| |||| |||||||||||| ||  ||||||||||||||||  | ||||  |||||||||||||    
T  22033853 ttgatcactctgatttatattccgctgtaactgttgagatttacatacatgtctatcggtttttttgaattttgaataagacgtaatctctatttcttga 22033754  T
Q  582 ataaatatatt 592  Q
    |||||| ||||    
T  22033753 ataaatgtatt 22033743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 484 - 592
Target Start/End: Original strand, 42449512 - 42449620
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||| ||  | | ||  |||||||||||||||    
T  42449512 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcgttttttgaattttgtataagacttaatctctatttcttgaat 42449611  T
Q  584 aaatatatt 592  Q
     ||| ||||    
T  42449612 taatttatt 42449620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 7642741 - 7642853
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| |||||||||| |||| ||||||||||||  | |||||||||||||||| | ||||   ||||||||||||||    
T  7642741 ttgatcactctgatttgtattccgctgtaactgttgagatttacatacatgtctatcag-ttttgaattttgaatgagacgtaatatctatttcttgaat 7642839  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  7642840 aaatgtattattcg 7642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 398
Target Start/End: Original strand, 20424938 - 20425081
Alignment:
Q  255 gaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatg 354  Q
    |||||||| || | |||| || |||||||||||||| ||| |||||||||||| || || || ||||| || |||| ||||||||| | || ||||| ||    
T  20424938 gaccaacatagtagcaaatttcctgatatgcgcatcgttggtccttggagtgatgtcgtaacagacttggactatattcaagatccactatattggtgtg 20425037  T
Q  355 gtttatgttcttccaatgtcatggtttttaaagatgttttaaat 398  Q
    |||||   ||||||||||||   |||| |||||| |||||||||    
T  20425038 gtttagaatcttccaatgtcgatgtttctaaagaggttttaaat 20425081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 585
Target Start/End: Original strand, 35524637 - 35524726
Alignment:
Q  496 gtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataa 585  Q
    |||||||||||||||| |||||||| |||||||| ||||| || |||||||  | ||||| ||| || |||||||||||||||||||||||    
T  35524637 gtttatattccgctgcgactgttgaagtttatatgcatgttta-tggttttgaatttttgtatgatgacgtagcctctatttcttgaataa 35524726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 27331365 - 27331419
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||| |||||||||| | ||||||||||||||||||||| |||| |||||||||    
T  27331365 ttcatgacatgtatatttggattactctagtttatattccactgcgactgttgag 27331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 9786572 - 9786692
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| ||||||||||| ||||||| |||||||| | ||||||  ||||| ||||||| |||  | |||||||||||       | |||    
T  9786572 ttcatgacatgtatattttgattactctggtttata-tccgctgcgattgttgaaatttatgtacatgtttat--ggttttgaatttt-------gtgta 9786661  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  9786662 gcctctatttcttgaataaatgtattattcg 9786692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 27331451 - 27331505
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| || |||||| |||||||||||||||||| |||| ||||    
T  27331451 ttttgaattttgaatgatgacgtagcatctatttcttgaataaatgtattattcg 27331505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 19985328 - 19985467
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19985328 atgtaatttattgcttcataacatgtatatgttgattactctggtttatattccgctacaactgttgaggtttatatacatgtctattggtttttgaatt 19985427  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||| |||||||||||||| ||||||||| ||||    
T  19985428 ttgaatgtggtgtagcctctatttcctgaataaatgtatt 19985467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 35017908 - 35018038
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  35017908 ttcataacatgtatatgttgattactctggtttatattccgctgcaactgttgaggtttgtatacatgtttattgttttttgaattttgaatgtggcgta 35018007  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  35018008 gcctctatttcttgaataaatgtattattcg 35018038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 13623372 - 13623516
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  |||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  13623372 atgtaatttattgattcataacatgtatatattgattactctgttttatattccgttgcgactgttgaggtttatatacatgtttattggtttttgaatt 13623471  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  13623472 ttgaatgtggcatagcctctatttcttgaataaatgtattattcg 13623516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 25954499 - 25954644
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  25954499 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 25954597  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  25954598 ttttgaatgtggcgtaacctctatttcttgaataaatgtattattcg 25954644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 11214188 - 11214042
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||| | ||||| |||||||  ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11214188 atgtgatttatctgttcatgacatgtacatattttgattaatctggtttatattccgctgcaactgttgaggtttatatacatgtctatcggtttttgaa 11214089  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11214088 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 11214042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 16235514 - 16235369
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16235514 atgtaatttattgattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 16235416  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  16235415 ttttgaatgtcgcgtagcctctatttcttgaataaatgtattattcg 16235369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 18740410 - 18740265
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  18740410 atgtaatttattgattcatgacatgtatatattttgattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattgg-ttttgaa 18740312  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18740311 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 33316860 - 33317005
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||     
T  33316860 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttgag 33316958  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  33316959 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 33317005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 18578579 - 18578434
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  |||||||||||||||  ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  18578579 atgtaatttattgattcataacatgtataa-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgttttttgaa 18578481  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18578480 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18578434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 453 - 598
Target Start/End: Original strand, 18835796 - 18835942
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| ||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||    
T  18835796 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccactgcgattgttgaggtttatatacatgtttattggtttttgaat 18835895  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcga 598  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  18835896 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcga 18835942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 16828255 - 16828399
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||  ||||||||||||| |||||||||| |||    
T  16828255 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaattttatatacatgtttattggtttt-gaa 16828352  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  16828353 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 16828399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 4988733 - 4988587
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggttttt-gaa 550  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  4988733 atgtaatttattgattcataacatgtatacttggatttactctggttaatattccgctgcgactgttgaggtttatatacatgtttattggttttttgaa 4988634  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  4988633 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 4988587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 488 - 597
Target Start/End: Complemental strand, 3143074 - 3142965
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3143074 ttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttgaattttgaatgtggcgtagcctctatttcttgaataaat 3142975  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  3142974 gtattattcg 3142965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 18844152 - 18844297
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |    
T  18844152 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgattgttgaggtttatatacatgtttattggtttttgagt 18844251  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||    
T  18844252 tttgaatgtggcgtagcctctatttcatgaataaatgtattattcg 18844297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 23975452 - 23975303
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctatt----ggtttt 546  Q
    ||||||||||||| |||||||||||||||  ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    || |||    
T  23975452 atgtaatttatttattcataacatgtataa-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattaattgggttt 23975354  T
Q  547 tgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23975353 tgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 23975303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 467 - 587
Target Start/End: Original strand, 13016960 - 13017079
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    |||||||||||||| | | |||||||||  ||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  13016960 ttcataacatgtatttttggattactctgatttatattccgctgcgactgttgaggtttacatacatgtttat-ggtttttgaattttgaatgtggcgta 13017058  T
Q  567 gcctctatttcttgaataaat 587  Q
    |||||||||||||||||||||    
T  13017059 gcctctatttcttgaataaat 13017079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 467 - 583
Target Start/End: Complemental strand, 17787489 - 17787374
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||    
T  17787489 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaggtttatatacatgttta-tggtttttgaattttgaatgtggtgta 17787391  T
Q  567 gcctctatttcttgaat 583  Q
    |||||||||||||||||    
T  17787390 gcctctatttcttgaat 17787374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 14628811 - 14628955
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  14628811 atgtaatttatttattcataacatgtatat-ttgaatttactcttgtttatattctgctgcgactgttgaggtttatatacatgtttattgatttttgaa 14628909  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||| ||||||| ||||||||||| ||||||||||||| |||| ||||    
T  14628910 tttcgaatgtgacgtagcctcta-ttcttgaataaatgtattattcg 14628955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 25647005 - 25647135
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    |||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||| |||||||||||| ||| ||||||    
T  25647005 ttcataacatgtatatttggattactctggtttatattccactgcaactgttgaagtttatatacatgtttattgg-ttttgaattttgtatgatggcgt 25647103  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  25647104 agcctctatttcttgaataaatgtattattcg 25647135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 23151453 - 23151323
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | |||| |||| |||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  23151453 ttcatgacatgtatatttggattgctctggtttatattccgctgcgactgttgaggtttatatacatg-cttatggtttttgaattttgaatgatggcgt 23151355  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  23151354 agcctctatttcttgaataaatgtattattcg 23151323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 18775250 - 18775120
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||| | ||||| ||| || |||    
T  18775250 ttcatgacatgtatattttgagtactctggtttatattccgctgcgactgttgaggtttatatacatgttta-tggttttttatttttgtatgatgacgt 18775152  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||| ||||    
T  18775151 agcctctatttcttgaataaatatattattcg 18775120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 31626477 - 31626347
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||| ||| |  |||    
T  31626477 ttcatgacatgtatatgttgagtactctggtttatattccgctgcgactgttgagatttatatacatgtttattgg-ttttgaattttggatgataacgt 31626379  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  31626378 agcctctatttcttgaataaatgtattattcg 31626347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 479 - 597
Target Start/End: Original strand, 1659844 - 1659961
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| || |||||||||||    
T  1659844 atattttgatcactctaatttatattccgctgtaactgttgaggtttatatacatgtctatccg-ttttgaattttgaatgtggcataacctctatttct 1659942  T
Q  579 tgaataaatatattcttcg 597  Q
    ||||||||| |||| ||||    
T  1659943 tgaataaatgtattattcg 1659961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 489 - 597
Target Start/End: Complemental strand, 16104574 - 16104466
Alignment:
Q  489 tactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaata 588  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||  | |||| ||||||||||||||||||||| ||||||||||     
T  16104574 tactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggttttgaattttttaatgtggcgtagcctctattttttgaataaatg 16104475  T
Q  589 tattcttcg 597  Q
    |||| ||||    
T  16104474 tattattcg 16104466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 18421857 - 18421726
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||||  | ||||| ||| ||| ||    
T  18421857 ttcatgacatgtatatttggattactttggtttatattccgctgcaactgttgagatttatatacatgtttattggttttgaatttttgtatgatggtgt 18421758  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  18421757 agcctctatttcttgaataaatgtattattcg 18421726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 19608433 - 19608320
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| || ||||  |||||||||||||||    
T  19608433 ttgatcactcttatttatattccgctgcgactgttgagatttatatacatgtctatcggtttttgaattttgaatatgacgtaatctctatttcttgaat 19608334  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  19608333 aaatgtattattcg 19608320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 18088954 - 18089054
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| || ||||  ||||||||||||||||||| |||| |||    
T  18088954 tttatattccgctgcgactgttgaggtttatatacatgtctatcagtttttgaattttgaatatgacgtaatctctatttcttgaataaatgtattattc 18089053  T
Q  597 g 597  Q
    |    
T  18089054 g 18089054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 25173223 - 25173123
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| |||    
T  25173223 tttatattccgctgtaactgttgaggtttatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattc 25173124  T
Q  597 g 597  Q
    |    
T  25173123 g 25173123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 484 - 598
Target Start/End: Complemental strand, 10486892 - 10486778
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||| ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  10486892 ttgatcactctaatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 10486793  T
Q  584 aaatatattcttcga 598  Q
    |||| |||| |||||    
T  10486792 aaatgtattattcga 10486778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 937273 - 937386
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  937273 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 937372  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  937373 aaatgtattattcg 937386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 479 - 592
Target Start/End: Complemental strand, 15860772 - 15860660
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||  |||||||||||||  ||||||||||||||||||||||||||||  ||||| |||||||||| |||||||| |||||||||||    
T  15860772 atattttgatcactctgatttatattccgctataactgttgaggtttatatacatgtctatccgtttt-gaattttgaaagtggcgtaacctctatttct 15860674  T
Q  579 tgaataaatatatt 592  Q
    ||||||||| ||||    
T  15860673 tgaataaatgtatt 15860660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 16229594 - 16229481
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16229594 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16229495  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16229494 aaatgtattattcg 16229481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16378434 - 16378547
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16378434 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16378533  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16378534 aaatgtattattcg 16378547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16385758 - 16385871
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16385758 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16385857  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16385858 aaatgtattattcg 16385871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 29871598 - 29871738
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  ||||| ||||||||| || ||| |||||  ||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  29871598 atttatttgctcatagcatgtatatatttgatcactctgatttgtattccgctgtaacagttgaggtttatatacatgtctatcggtttttgaattttga 29871697  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  29871698 ataagacgtaatctctatttcttgaataaatgtattattcg 29871738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 1652115 - 1652228
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  1652115 ttgatcactctgatttatattccactgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 1652214  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  1652215 aaatgtattattcg 1652228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 9480200 - 9480313
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  |  |||  |||||||||||||||    
T  9480200 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagatgtaatctctatttcttgaat 9480299  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  9480300 aaatgtattattcg 9480313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16646030 - 16646143
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16646030 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16646129  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16646130 aaatgtattattcg 16646143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16651396 - 16651509
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16651396 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16651495  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16651496 aaatgtattattcg 16651509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 21787109 - 21787222
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||  | ||||  |||||||||||||||    
T  21787109 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcagtttttgaattttgaataagacgtaaactctatttcttgaat 21787208  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  21787209 aaatgtattattcg 21787222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 496 - 597
Target Start/End: Original strand, 25746438 - 25746539
Alignment:
Q  496 gtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaa-tgtggcgtagcctctatttcttgaataaatatattct 594  Q
    |||||||||||||||| |||||||| |||||||||||||| |  |||||||||||||||||| | ||||||| |||||||||||||||||||| |||| |    
T  25746438 gtttatattccgctgcgactgttgatgtttatatacatgt-ttgtggtttttgaattttgaattatggcgtaacctctatttcttgaataaatgtattat 25746536  T
Q  595 tcg 597  Q
    |||    
T  25746537 tcg 25746539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 23987054 - 23986941
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||  | ||||  |||||||||||||||    
T  23987054 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcagtttttgaattttgaataagacgtaatctctatttcttgaat 23986955  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  23986954 aaatgtattattcg 23986941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 27656248 - 27656348
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||  |  |||  ||||||||||||||||||| |||| |||    
T  27656248 tttatattccgctgcagctattgaggtttatatacatgtctgtcggtttttgaattttgaataagatgtaatctctatttcttgaataaatgtattattc 27656347  T
Q  597 g 597  Q
    |    
T  27656348 g 27656348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 597
Target Start/End: Original strand, 2182014 - 2182096
Alignment:
Q  517 ttgaggtttatatacatgtctattggtttt--tgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  2182014 ttgaggtttatatacatgttatttggtttttttgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 2182096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 22428331 - 22428201
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | |  |||||| | |||||||||||||| | |||||| ||||||| |||||| |||| | |||||||||||||||| ||| ||    
T  22428331 ttcatgacatgtatatttggtgtactctggcttatattccgctgcgattgttgaagtttatacacatgtttatt-gattttgaattttgaatgatggtgt 22428233  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  22428232 agcctctatttcttgaataaatgtattattcg 22428201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 23162147 - 23162034
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| |||||||| |||||| ||||||||||||  |||||||||||||||||  | ||||  |||||||||||||||    
T  23162147 ttgatcactctgatttgtattccgctgtaactgttggggtttacatacatgtctatcagtttttgaattttgaataagacgtaatctctatttcttgaat 23162048  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  23162047 aaatgtattattcg 23162034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 398
Target Start/End: Complemental strand, 1043114 - 1042981
Alignment:
Q  265 gcaacaaactttctgatatgcgcatccttgatccttggagtgacgttgtgacggacttagattataatcaagatcccccatcttggtatggtttatgttc 364  Q
    ||||| ||||||||||||||  |||| ||| ||  |||||||||  | ||||||| |||||||| ||||||||||||    ||||| |||||| | ||||    
T  1043114 gcaaccaactttctgatatgaacatcgttggtctatggagtgaccctatgacggatttagattaaaatcaagatccctagccttggcatggttcaagttc 1043015  T
Q  365 ttccaatgtcatggtttttaaagatgttttaaat 398  Q
    ||||||| ||||||||| ||| ||||||||||||    
T  1043014 ttccaatatcatggtttctaaggatgttttaaat 1042981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 26087782 - 26087669
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||| | |||||||| ||| ||||| |||||||| ||||||||||||||||||  | ||||  ||||||||||| |||    
T  26087782 ttgatcactctgatttatattccgctacgactgttgaagttcatatatatgtctatcggtttttgaattttgaataagacgtaatctctatttcttaaat 26087683  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  26087682 aaatgtattattcg 26087669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 543 - 587
Target Start/End: Original strand, 18005375 - 18005419
Alignment:
Q  543 tttttgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18005375 tttttgaattttgaatgtggcgtagcctctatttcttgaataaat 18005419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 453 - 525
Target Start/End: Original strand, 18005303 - 18005376
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggttt 525  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| |||||||||||||    
T  18005303 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggttt 18005376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 597
Target Start/End: Complemental strand, 18396909 - 18396789
Alignment:
Q  477 gtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatt 575  Q
    |||||| |||| |||||  |||||||||||||||| ||| ||||| ||||||| ||||| | || |  ||||||||||||||| ||  ||||| ||||||    
T  18396909 gtatattttgagtactcaggtttatattccgctgcgactattgagatttatatgcatgtatgtt-gagtttgaattttgaatgatgatgtagcatctatt 18396811  T
Q  576 tcttgaataaatatattcttcg 597  Q
    |||||||||||| |||| ||||    
T  18396810 tcttgaataaatgtattattcg 18396789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 22227831 - 22227882
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgt 535  Q
    ||||| |||||  |||||||||||||||||||||||| ||||||||||||||    
T  22227831 ttgatcactctgatttatattccgctgcaactgttgaagtttatatacatgt 22227882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 587
Target Start/End: Complemental strand, 22866148 - 22866037
Alignment:
Q  475 atgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctcta 573  Q
    |||||||| | ||||||||  |||||||||||||| | | ||| ||| ||||||| |||| || |||||||| |||||||| ||| || |||||| ||||    
T  22866148 atgtatatttggattactcgggtttatattccgctacgattgtcgagatttatatgcatg-cttttggtttt-gaattttgtatgatgacgtagcatcta 22866051  T
Q  574 tttcttgaataaat 587  Q
    ||||||||||||||    
T  22866050 tttcttgaataaat 22866037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 592
Target Start/End: Complemental strand, 32895938 - 32895889
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  32895938 ttttgaattttgaatgatgatgtagcctctatttcttgaataaatgtatt 32895889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 18128061 - 18128013
Alignment:
Q  487 attactctagtttatattccgctgcaactgttgaggtt-tatatacatg 534  Q
    |||||||| |||||||||||||||| ||||||||| || ||||||||||    
T  18128061 attactctggtttatattccgctgcgactgttgagattatatatacatg 18128013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 113; Significance: 6e-57; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 30793 - 30649
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  30793 atgtaatttattgattcatgacatgtatatgttgattactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaatt 30694  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  30693 ttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 30649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 6e-57; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 15861323 - 15861467
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  15861323 atgtaatttattgattcataacatgtatatgttgattactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaatt 15861422  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||    
T  15861423 ttgaatgtggcgtagcttctatttcttgaataaatgtattattcg 15861467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 54043033 - 54043177
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  54043033 atgtaatttattgattcataacatgtatatgttgattactctggtttatattctgctgcaactgttgaggtttagatacatgtttattggtttttgaatt 54043132  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||    
T  54043133 ttgagtgtggcgtagcctctatttcttgaataaatgtattattcg 54043177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 19944551 - 19944408
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  19944551 atgtaatttgttgcttcataacatgtatatgttgattactctgatttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaa-t 19944453  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||    
T  19944452 ttgaatgtggcgtagcctctatttcttaaataaatgtattattcg 19944408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 22272779 - 22272634
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22272779 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 22272681  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22272680 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 22272634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 16818792 - 16818647
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16818792 atgtaatttattgattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 16818694  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  16818693 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 16818647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 18905872 - 18906017
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||||| |||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  18905872 atgtaatttatttattcatgacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 18905970  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18905971 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18906017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 18915958 - 18915813
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  18915958 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgtgactgttgaggtttatatacatgtttattggtttttgaa 18915860  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18915859 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18915813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 45580882 - 45580741
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||||||||||| |||||| ||||||| || ||  ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  45580882 atgtaatttattgcttcatgacatgtacatatttggattactctggtttatattctgctgcaactgttgaggtttatatacatgtttattggtttttgaa 45580783  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  45580782 ttttgaatgtggcgtagcctctatttcttgaataaatgtatt 45580741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 16259380 - 16259235
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  16259380 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaat 16259281  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  16259280 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 16259235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 18908425 - 18908280
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||  ||||||||||||||||||||||| | ||||||||||||    
T  18908425 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgtgactgttgaggtttatatacatgttttttggtttttgaa 18908327  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18908326 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18908280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 14695537 - 14695397
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  14695537 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttaaat 14695438  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  14695437 tttgaatgtggcgtagcctctatttcttgaataaatgtatt 14695397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 2045326 - 2045215
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2045326 gattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgcatgtggcgtagcctctatttcttgaataa 2045227  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  2045226 atgtattattcg 2045215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 2048055 - 2047944
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2048055 gattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgcatgtggcgtagcctctatttcttgaataa 2047956  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  2047955 atgtattattcg 2047944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 38165967 - 38165821
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  38165967 atgtaatttattgattcatgacatgtacatattttgattactctggtttatattccgctgcaactgttgatgtttatatacatgtttattgatttttgaa 38165868  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||    
T  38165867 ttttgaatgtggtgtagcctctatttcttgaataaatgtattattcg 38165821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 486 - 592
Target Start/End: Complemental strand, 23490501 - 23490395
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23490501 gattactctgatttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 23490402  T
Q  586 atatatt 592  Q
    || ||||    
T  23490401 atgtatt 23490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 7851424 - 7851279
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  7851424 atgtaatttattgattcatgacatgtatatttggattactctggtttatattccgctgcgactgttgagatttatatacatgtttattggtttttgaatt 7851325  T
Q  553 ttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||| ||| |||||||||||||||||||||||||||| |||| ||||    
T  7851324 ttggatgatggcgtagcctctatttcttgaataaatgtattattcg 7851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 11812549 - 11812404
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||| |||||||||||||||  | |||| |||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  11812549 atgtaatttatttattcataacatgtatacttggatttactctagtttgtattccgctgcgactgttgaggtttatatgcatgtttattggtttttgaat 11812450  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||| |||||||| ||||||||||||||||| |||| ||||    
T  11812449 tttgaatgttgcgtagcccctatttcttgaataaatgtattattcg 11812404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 33339772 - 33339646
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||    
T  33339772 ttcatgacatgtatattttgattactctggtttatattccgctgcaactgttgaggtttatat----gtttattggtttttgaattttgaatgtggcgta 33339677  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  33339676 gcctctatttcttgaataaatgtattattcg 33339646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 485 - 592
Target Start/End: Original strand, 4948608 - 4948715
Alignment:
Q  485 tgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaata 584  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4948608 tgattactctggtttatattccgttgcaactgttgaggtttatatacatgtttatcggtttttgaattttgaatgtggcgtagcctctatttcttgaata 4948707  T
Q  585 aatatatt 592  Q
    ||| ||||    
T  4948708 aatgtatt 4948715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 10736555 - 10736445
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10736555 gattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattgg-ttttgaattttgaatgtggcgtagcctctatttcttgaataa 10736457  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  10736456 atgtattattcg 10736445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 14846766 - 14846906
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||    
T  14846766 atttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgatgtttatatacatgtctatcgg-ttttgaattttg 14846864  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  14846865 aatgtggcgtagcctctatttcttgaataaatgtattattcg 14846906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 15470584 - 15470725
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15470584 atttatttgttcatgacatgtacatattttgatcactctggtttacattccgctgcaactgttgaggtttatatacatgtctagtggtttttgaattttg 15470683  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| | |||||||||||||||||| |||| ||||    
T  15470684 aatgtggcgtaacttctatttcttgaataaatgtattattcg 15470725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 30140729 - 30140583
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg---gtttttga 549  Q
    ||||||||||||  |||||||| ||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    |||||||    
T  30140729 atgtaatttatta-ttcataacgtgtatatttggattactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgattttttttga 30140631  T
Q  550 attttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  30140630 attttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 30140583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 453 - 584
Target Start/End: Original strand, 19572914 - 19573047
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||| ||||||  ||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19572914 atgtagtttattgattcatgacatgtatatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttctgaa 19573013  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaata 584  Q
    ||||| |||||||||| |||||||||||||||||    
T  19573014 ttttgcatgtggcgtaacctctatttcttgaata 19573047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 25056789 - 25056648
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||| |||||  |||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||    
T  25056789 atttatttgttcatgacatgtacatattttgatcactctgatttatattccgctgtaactgttgatgtttacatacatgtctatcggtttttgaattttg 25056690  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||||||||||||| |||| ||||    
T  25056689 aatgtggcgtaacctctatttcttgaataaatgtattattcg 25056648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 38527611 - 38527481
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||||| |||| | |||||||||||||||| ||||||    
T  38527611 ttcatgacatgtatatctggattactctggtttatattccgctgcgactgttgaagtttatatacatgtttatt-gattttgaattttgaatgatggcgt 38527513  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  38527512 agcctctatttcttgaataaatgtattattcg 38527481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 467 - 585
Target Start/End: Original strand, 51160592 - 51160711
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttt--tgaattttgaatgtggcg 564  Q
    ||||| |||||||||| | |||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  51160592 ttcatgacatgtatat-tggattactctagtttatattccgttgcgattgttgaggtttatatacatgtttattgttttttttgaattttgaatgtggcg 51160690  T
Q  565 tagcctctatttcttgaataa 585  Q
    |||||||||||||||||||||    
T  51160691 tagcctctatttcttgaataa 51160711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 19230085 - 19229939
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| ||||||| || ||  ||||||||| |||||||||||| || |||||||||||||||||||||||| | ||||||||||||    
T  19230085 atgtaatttattgattcatgacatgtacatatttggattactctggtttatattccgttgtaactgttgaggtttatatacatgtttgttggtttttgaa 19229986  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||| || | ||| |||||||||||||||||||| |||| ||||    
T  19229985 ttttgaaagtcgtgtaacctctatttcttgaataaatgtattattcg 19229939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 488 - 585
Target Start/End: Complemental strand, 5225484 - 5225388
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5225484 ttactctggtttatattccgctgcgactgttgaggtttatatacattattattg-tttttgaattttgaatgtggcgtagcctctatttcttgaataa 5225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 17059712 - 17059599
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||||  |||||||||||||||    
T  17059712 ttgatcactctgatttatattccgctgcgactgttgaggtttatatacatgtctatcggtttttgaattttgaatatgacgtaatctctatttcttgaat 17059613  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  17059612 aaatgtattattcg 17059599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 597
Target Start/End: Complemental strand, 12796466 - 12796328
Alignment:
Q  460 ttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaat 558  Q
    |||||| |||||  ||||||||| || ||| |||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  12796466 ttatttgttcatggcatgtatatatttgatcactctgatttatattccgctgcaactattgaggtttatatacatgtctatcggtttttgaattttgaat 12796367  T
Q  559 gtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
      | ||||  ||||||||||||||||||| |||| ||||    
T  12796366 aagacgtaatctctatttcttgaataaatgtattattcg 12796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 15574010 - 15573897
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  | ||||  |||||||||||||||    
T  15574010 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctattggtttttgaattttgaataagacgtaatctctatttcttgaat 15573911  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  15573910 aaatgtattattcg 15573897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 44227431 - 44227318
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  44227431 ttgatcactctgatttatattccgctgcaactattgaggtttatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 44227332  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  44227331 aaatgtattattcg 44227318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 319744 - 319874
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||| ||| ||| ||||||||||||||||||| |||| | ||||||||||| |||| ||||||    
T  319744 ttcatgacatgtatatttggattactctggtttatattccgatgcgactattgaggtttatatacatgtttattag-ttttgaatttttaatgatggcgt 319842  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||| |||| ||||    
T  319843 agcctctattgcttgaataaatgtattattcg 319874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 1469801 - 1469914
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  1469801 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 1469900  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  1469901 aaatgtattattcg 1469914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 2451715 - 2451828
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  2451715 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 2451814  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  2451815 aaatgtattattcg 2451828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 12266648 - 12266760
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||| | ||||  |||||||||||||||    
T  12266648 ttgatcactctgatttatattccgttgcaactgttgaggtttatatacatgtctatcggtttttgaattttg-atgagacgtaatctctatttcttgaat 12266746  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  12266747 aaatgtattattcg 12266760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 15613029 - 15612916
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  15613029 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 15612930  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  15612929 aaatgtattattcg 15612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 30151342 - 30151229
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  30151342 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 30151243  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  30151242 aaatgtattattcg 30151229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 53768666 - 53768553
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  53768666 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 53768567  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  53768566 aaatgtattattcg 53768553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 6148935 - 6149065
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | | ||||||| |||||||||||||||| |||||||| |||||||||||||| || |||||||  | ||||| ||| ||||||    
T  6148935 ttcatgacatgtatatttggtttactctggtttatattccgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatggcgt 6149033  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  6149034 agcctctatttcttgaataaatgtattattcg 6149065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 6155527 - 6155657
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | | ||||||| |||||||||||||||| |||||||| |||||||||||||| || |||||||  | ||||| ||| ||||||    
T  6155527 ttcatgacatgtatatttggtttactctggtttatattccgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatggcgt 6155625  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  6155626 agcctctatttcttgaataaatgtattattcg 6155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 13963510 - 13963623
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  13963510 ttgatcactctgatttatattccgctgtaactgttgagaattacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 13963609  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  13963610 aaatgtattattcg 13963623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 17215481 - 17215594
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    ||||  || ||||||||||||    
T  17215481 ttgatcactctgatttatattccgctgaaactgttgaggtttacatacatgtctatcggtttttgaattttgaataaaacgtaaactatatttcttgaat 17215580  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  17215581 aaatgtattattcg 17215594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 27838722 - 27838609
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| |||||||| ||| | |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  27838722 ttgatcactctgatttatattccgctgcgactgttgaagttaaaatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 27838623  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  27838622 aaatgtattattcg 27838609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 55314386 - 55314273
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  55314386 ttgatcactctgatttatattccgctgtaactgttgagaattacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 55314287  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  55314286 aaatgtattattcg 55314273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 14296474 - 14296345
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg-aatgtggcgt 565  Q
    ||||| |||||||||| | |  ||||||||||||||||||||||  |||||||| |||||||||||||| |||  | |||||||||||| | | || |||    
T  14296474 ttcatgacatgtatatttggtgtactctagtttatattccgctgtgactgttgaagtttatatacatgtttat--ggttttgaattttgtactatgacgt 14296377  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  14296376 agcctctatttcttgaataaatgtattattcg 14296345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 14302101 - 14301972
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg-aatgtggcgt 565  Q
    ||||| |||||||||| | |  ||||||||||||||||||||||  |||||||| |||||||||||||| |||  | |||||||||||| | | || |||    
T  14302101 ttcatgacatgtatatttggtgtactctagtttatattccgctgtgactgttgaagtttatatacatgtttat--ggttttgaattttgtactatgacgt 14302004  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  14302003 agcctctatttcttgaataaatgtattattcg 14301972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 41268233 - 41268133
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| |||    
T  41268233 tttatattccgctgtaactgttgagaattacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattc 41268134  T
Q  597 g 597  Q
    |    
T  41268133 g 41268133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 8629816 - 8629671
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| |||||||| |||||||||||||| || |||||||  | |    
T  8629816 atgtaatttattgattcataacatgtataattggatttactctggtttatattccgctgctactgttgaagtttatatacatgttta-tggttttgaatt 8629718  T
Q  552 tttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||| ||| ||  ||||| |||||||||||||||||| |||| ||||    
T  8629717 tttgtatgatgatgtagcttctatttcttgaataaatgtattattcg 8629671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 8270524 - 8270667
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtcta---ttggtttttgaattt 553  Q
    ||||||||  |||| |||||||||| || ||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||   ||  |||||||||||    
T  8270524 atttatttgctcatgacatgtatatatttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcgtttttttttgaattt 8270623  T
Q  554 tgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||| | ||||  ||||||||||||||||||| |||| ||||    
T  8270624 tgaatgagacgtaatctctatttcttgaataaatgtattattcg 8270667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 13977786 - 13977899
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||||||||||  | ||||  |||||||| ||||||    
T  13977786 ttgatcactctgatttatattccgctgtaactgttgagaattacatacatgtctatcggtttttgaattttgaataagacgtaatctctattttttgaat 13977885  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  13977886 aaatgtattattcg 13977899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 45859025 - 45858912
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||||||||||  |  |||  |||||||||||||||    
T  45859025 ttgatcactctgatttatattccgctgtaactgttgagaattacatacatgtctatcggtttttgaattttgaataagatgtaatctctatttcttgaat 45858926  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  45858925 aaatgtattattcg 45858912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 8277662 - 8277777
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctat--tggtttttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| ||||||||||||  |  ||||||||||||||||| | ||||  |||||||||||||    
T  8277662 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcgttttttttgaattttgaatgagacgtaatctctatttcttga 8277761  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  8277762 ataaatgtattattcg 8277777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 8306471 - 8306586
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctat--tggtttttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| ||||||||||||  |  ||||||||||||||||| | ||||  |||||||||||||    
T  8306471 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcgttttttttgaattttgaatgagacgtaatctctatttcttga 8306570  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  8306571 ataaatgtattattcg 8306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 11694344 - 11694229
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattgg--tttttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||  ||||||||||||||||  | ||||  |||||||||||||    
T  11694344 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttttgaattttgaataagacgtaatctctatttcttga 11694245  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  11694244 ataaatgtattattcg 11694229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 47786998 - 47787129
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| ||||||||||| |||| | ||||||||||||||| ||||  | ||||||||  ||||||| ||| || |||    
T  47786998 ttcatgacatgtatatttggagtactctggtttatattccactgcgattgttgaggtttatatgcatgcatgttggttttgaaattttgtatgatgacgt 47787097  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  47787098 agcatctatttcttgaataaatgtattattcg 47787129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 475 - 587
Target Start/End: Complemental strand, 40937683 - 40937571
Alignment:
Q  475 atgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtgg-cgtagcctcta 573  Q
    |||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||| ||||  |||||| ||| |||||||| ||  || |||||| ||||    
T  40937683 atgtatatttggattactctggtttatattccgctgcgactgttgagatttatatgcatgcttattgg-tttcgaattttgtattcggacgtagcatcta 40937585  T
Q  574 tttcttgaataaat 587  Q
    ||||||||||||||    
T  40937584 tttcttgaataaat 40937571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 587
Target Start/End: Original strand, 53900718 - 53900838
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | |  |||||| |||||||||||||||| |||||||| |||||||||||||| |  |||||||  | ||||| ||| || |||    
T  53900718 ttcatgacatgtatatttggcgtactctggtttatattccgctgcgactgttgaagtttatatacatgt-tcatggttttgaatttttgtatgatgacgt 53900816  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||||||||||||||||||||||    
T  53900817 agcctctatttcttgaataaat 53900838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 11199679 - 11199809
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || ||||||||||||||||||| ||| ||||||||| ||||||| ||||  | || |  ||||||||||||||| || | |    
T  11199679 ttcatgacatgtatatttggagtactctagtttatattccgttgcgactgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatgtcat 11199777  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||  |||||||||||||||||||||| ||||    
T  11199778 agcacctatttcttgaataaatatattattcg 11199809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 517 - 597
Target Start/End: Complemental strand, 13815634 - 13815554
Alignment:
Q  517 ttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||| |||||| ||||||||||| |||| ||| ||| |||||||||||||||||||| |||| ||||    
T  13815634 ttgaggtttatatacatgtttattgg-ttttgaattttaaatgatggtgtaacctctatttcttgaataaatgtattattcg 13815554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16746320 - 16746433
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| ||||||||||| ||| ||||  || |||||||||||||| |||||| |||||||||||  | ||||  |||||||||||||||    
T  16746320 ttgatcactctgatttgtattccgctgcgactattgaaattcatatacatgtctatcggttttggaattttgaataagacgtaatctctatttcttgaat 16746419  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16746420 aaatgtattattcg 16746433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16936122 - 16936235
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| ||||||| || ||||||||||||||| ||||||||||||  ||||||||||||||||   | ||||  || ||||||||||||    
T  16936122 ttgatcactctgatttgtattccgatgtaactgttgaggtttacatacatgtctatcagtttttgaattttgaaaaagacgtaaactatatttcttgaat 16936221  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16936222 aaatgtattattcg 16936235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 539 - 597
Target Start/End: Original strand, 50114334 - 50114393
Alignment:
Q  539 ttggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  50114334 ttgggttttgaattttgaatgatggcgtagcctctatttcttgaataaatgtattattcg 50114393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 491 - 592
Target Start/End: Complemental strand, 35121637 - 35121536
Alignment:
Q  491 ctctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatat 589  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  || |||||||  | ||||| ||| || |||| | || |||||||||||||||||    
T  35121637 ctctagtttatattccgctgcgactgttgaagtttatatacatgatta-tggttttgaatttttgtatgatgacgtaacatccatttcttgaataaatat 35121539  T
Q  590 att 592  Q
    |||    
T  35121538 att 35121536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 17098654 - 17098514
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtt-tatatacatgtct---------attggtttttgaattttga 556  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||| || ||||| ||||  |         ||||||||| ||||||||     
T  17098654 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgagattatatatgcatgcatgtttgaatcattggtttt-gaattttgt 17098556  T
Q  557 atg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||||||||||||| |||| ||||    
T  17098555 atgatggcgtagcctctatttcttgaataaatgtattattcg 17098514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 535
Target Start/End: Complemental strand, 17936168 - 17936121
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgt 535  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  17936168 ttactctggtttatattccgctgcgactgttgaagtttatatacatgt 17936121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 496 - 597
Target Start/End: Complemental strand, 14287033 - 14286932
Alignment:
Q  496 gtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattct 594  Q
    |||||||||||||||| ||||||||| ||||||| ||||  | || |  ||||||||||||||| |  |||||| |||||||||||||||||| |||| |    
T  14287033 gtttatattccgctgcgactgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatcacgtagcgtctatttcttgaataaatgtattat 14286935  T
Q  595 tcg 597  Q
    |||    
T  14286934 tcg 14286932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 496 - 597
Target Start/End: Original strand, 17537205 - 17537306
Alignment:
Q  496 gtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattct 594  Q
    |||||||||||||||| | ||||||| ||||||| ||||  | || |  ||||||||||||||| || |||| |||||||||||||||||||| |||| |    
T  17537205 gtttatattccgctgcgattgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatgacgtaacctctatttcttgaataaatgtattat 17537303  T
Q  595 tcg 597  Q
    |||    
T  17537304 tcg 17537306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 30204429 - 30204368
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatg 534  Q
    |||||||||| |||| |||||| |||||||||||||||| ||||||||  ||||||| ||||    
T  30204429 acatgtatattttgagtactctggtttatattccgctgcgactgttgaaatttatatgcatg 30204368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 521
Target Start/End: Original strand, 12351981 - 12352028
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||||||| | |||||||||||||||||||||||||  |||||||||    
T  12351981 catgtatatttggattactctagtttatattccgctgtgactgttgag 12352028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 12352060 - 12352114
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||| |||| ||||    
T  12352060 ttttgatttttgaatgatggcgtggcctctatttcttgaataaatgtattattcg 12352114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 22148904 - 22148958
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |||| ||||    
T  22148904 ttttgaattttgtatgatggcgtaacctctatttcttgaataaatgtattattcg 22148958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 22148824 - 22148872
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    |||||||||| | ||||||||| |||||||||||||||| |||| ||||    
T  22148824 acatgtatatttggattactctggtttatattccgctgcgactgatgag 22148872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 21 - 397
Target Start/End: Original strand, 21408165 - 21408549
Alignment:
Q  21 actaaatataatcttgttaagaatgtccctaaaagacatga------gcaaggctgtagtaatattgtgcttgataaagatcctattattcttgacataa 114  Q
    |||||| |||||| |||||||||||| |||||||| ||||       ||||| | ||||||| |||||| | || ||||||| ||||||| | |||||||    
T  21408165 actaaagataatcatgttaagaatgttcctaaaaggcatggtcaagtgcaagaccgtagtaaaattgtggtggacaaagatcatattattgtcgacataa 21408264  T
Q  115 tgtggtctaaggaagtaacaacta--atgtgttggtgggtgatgttataaacattgaggaagaactatattctagcacttccgttgagtctgtttaggtt 212  Q
    || | ||||||||||||| |||||  ||||||| || | |||||||||||||  | |||||||||||||| ||||   ||| |||||| | ||| |||||    
T  21408265 tgagatctaaggaagtaagaactataatgtgtttgtcgttgatgttataaaccattaggaagaactatatcctagtgtttcagttgaggcagttcaggtt 21408364  T
Q  213 caatcaacgcatgttgaagcgatgactgaaatacaaggtgatgaccaacagagcaacaaactttctgatatgcgcatccttgatccttggagtgacgttg 312  Q
    |||||||| |||||||||| ||||| ||||| |||| |||| | |||||| |||||  |||||  ||||||||||||  ||| ||||||| | | |  ||    
T  21408365 caatcaacacatgttgaagtgatgaatgaaaaacaaagtgaagtccaacatagcaatgaacttcttgatatgcgcattgttggtccttggcgcggcactg 21408464  T
Q  313 tgacggacttagattataatcaagatcccccatcttggtatggtttatgttcttccaatgtcatggtttttaaagatgttttaaa 397  Q
    |||| ||||| |||||||  ||||||| ||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  21408465 tgacagacttggattatatgcaagatctcccgtcttggtatggtttaagttcttcaaatgtcatggtttctaaagatgttttaaa 21408549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 53909972 - 53910119
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtcta---ttggtttttga 549  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||   |||||||||||    
T  53909972 atgtaatttattgattcataacatgtatatgttgattactctggtttatattccgctgcaactgttgaggtttatatacatgtgtattgttggtttttga 53910071  T
Q  550 attttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  53910072 attttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 53910119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 10642122 - 10641977
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  10642122 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 10642024  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  10642023 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 10641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 18245923 - 18245778
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  18245923 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 18245825  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18245824 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18245778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 9293460 - 9293315
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  9293460 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccactgcgactgttgaggtttatatacatgtttattggtttttgaa 9293362  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9293361 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 9293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 15274916 - 15275061
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  15274916 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattctgctgcgactgttgaggtttatatacatgtctatcggtttttgaa 15275014  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  15275015 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 15275061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 17150501 - 17150646
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  17150501 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 17150599  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  17150600 ttttgaatgtagcgtagcctctatttcttgaataaatgtattattcg 17150646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 7134755 - 7134900
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||| |||||||||||||||| |  ||| ||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  7134755 atgtaatttatttattcataacatgtatatttcaatttactctggtttatattccgctgtgactgttgaggtttatatacatgtttattggtttttgaat 7134854  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  7134855 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 7134900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 16520548 - 16520408
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  16520548 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcaactgttgaggtttatatacatgtcctttggtttttgaat 16520449  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  16520448 tttgaatgtggcgtagcctctatttcttgaataaatgtatt 16520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 453 - 587
Target Start/End: Original strand, 16366866 - 16367002
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttg--attactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||   |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16366866 atgtaatttattgattcatgacatgtatatattttcattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaa 16366965  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    ||||||||||| |||||||||||||||||||||||||    
T  16366966 ttttgaatgtgtcgtagcctctatttcttgaataaat 16367002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 109528 - 109383
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| ||||||| || ||  ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  109528 atgtaatttattgattcatgacatgtacatatttggattactctggtt-atattccgctgcaactgttgaggtttatatacatgtttattagtttttgaa 109430  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  109429 ttttgaatgtggcgtagcctctatttcttgaataaatatattattcg 109383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 457 - 597
Target Start/End: Complemental strand, 8372350 - 8372209
Alignment:
Q  457 aatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatttt 554  Q
    ||||||| | |||||||||||||||| ||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  8372350 aatttatctattcataacatgtatat-ttgaatttactctggtttatattccactgcgactgttgaggtttatatacatgtttattggtttttgaatttt 8372252  T
Q  555 gaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  8372251 gaatgtggcgtagcctctatttcttgaataaatgtattattcg 8372209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 26677926 - 26677781
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  26677926 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgacttttgaggtttatatacatgtttattggtttttgaa 26677828  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    || |||||||||||||||||||||||||||||| ||| |||| ||||    
T  26677827 ttctgaatgtggcgtagcctctatttcttgaatgaatgtattattcg 26677781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 5685040 - 5685185
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||  |||| | ||||||||||||||||||||| ||||||||||| ||    
T  5685040 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattcttctgcgattgttgaggtttatatacatgtttattggttttttaa 5685138  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  5685139 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 5685185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 13244385 - 13244239
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| | |||||||| ||  ||||||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  13244385 atgtaatttattgattcatgatatgtatatatttggattactctggtttatattccactgtaactgttgaggtttatatacatgtttattggtttttgaa 13244286  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  13244285 ttttgaatgtggcgtagcctctatttcttaaataaatgtattattcg 13244239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 54050596 - 54050740
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||||| || |||||||||||| |||||||||| ||||||||||| ||    
T  54050596 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgccgcgactgttgaggtt-atatacatgtttattggtttttaaa 54050693  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  54050694 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 54050740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 15138654 - 15138795
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  15138654 atttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgaggtttatatacatgtctatcggtttttgaattttg 15138753  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||| || |||| |||||||||||||||||||| |||| ||||    
T  15138754 aatatgacgtaacctctatttcttgaataaatgtattattcg 15138795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 18166621 - 18166476
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  ||||||| |||||||| |  ||| | ||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  18166621 atgtaatttattgattcataatatgtatatttaaatttattctggtttatattccgctgcgactgttgaggtttatatatatgtctatcggtttttgaat 18166522  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  18166521 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 18166476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 14994234 - 14994094
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||| ||||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||    
T  14994234 atttatttgttcatgacatgtacatattttgatcactctggtttatattccgctgtaactgttgaggtttgtatacatgtctatcggtttt-gaattttg 14994136  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  14994135 aatgtggcgtagcctctatttcttgaataaatgtattattcg 14994094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 19998262 - 19998113
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctatt----ggtttt 546  Q
    ||||||||||||| |||||||||||||||  ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    || |||    
T  19998262 atgtaatttatttattcataacatgtataa-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattaattgggttt 19998164  T
Q  547 tgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  19998163 tgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 19998113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 37474480 - 37474336
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| | ||||||||||| || |||||||| ||| |||||||||| ||||||||||| ||    
T  37474480 atgtaatttatttattcataacatgtatat-ttgaatttactctggattatattccgccgcgactgttgatgtt-atatacatgtttattggtttttaaa 37474383  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  37474382 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 37474336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 457 - 597
Target Start/End: Original strand, 53707063 - 53707204
Alignment:
Q  457 aatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatttt 554  Q
    ||||||||| ||| |||||||||||| ||||  ||||||| ||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||    
T  53707063 aatttatttattcgtaacatgtatat-ttgaatttactctggtttatattccgccgcgattgttgaggtttatatacatgtttattggtttttgaatttt 53707161  T
Q  555 gaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||| ||||||||| |||||||||||||||| |||| ||||    
T  53707162 gaatgtagcgtagcctttatttcttgaataaatgtattattcg 53707204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 55379021 - 55379149
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  55379021 ttcatgacatgtatat-tggattactctggtttatattccgctgcgactgttgaggtttatatacatgtttat-gatttttgaattttgaatgtgacgta 55379118  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  55379119 gcctctatttcttgaataaatgtattattcg 55379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 12838454 - 12838584
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||| || ||| |||||||||||| ||| ||||||    
T  12838454 ttcatgacatgtatatgttgagtactctggtttatattccgctgcgactgttgagatttatatacatgtttaatgg-ttttgaattttggatgatggcgt 12838552  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  12838553 agcctctatttcttgaataaatgtattattcg 12838584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 41066721 - 41066866
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  41066721 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctacgactgttgaggtttatgtacatgtttattggtttttgaa 41066819  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  41066820 ttttgaataagacgtaatctctatttcttgaataaatgtattattcg 41066866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 8874611 - 8874735
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    |||||||||| | ||||| ||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||    
T  8874611 acatgtatatttcgattattctggtttatattccgctgcgactgttgaggtttatatacatgttta-tggtttttgaattttgaatgatggcgtaacctc 8874709  T
Q  572 tatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||| ||||    
T  8874710 tatttcttgaataaatgtattattcg 8874735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 54120435 - 54120572
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacat--gtctattggtttttgaa 550  Q
    ||||||||||||  |||||||||||||||||||||||         ||||||||||||||| |||||| ||||||||| ||  || ||||||||||||||    
T  54120435 atgtaatttattgattcataacatgtatatgttgatt---------tatattccgctgcaagtgttgatgtttatatatatatgtttattggtttttgaa 54120525  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  54120526 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 54120572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 15211271 - 15211124
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggttttt--g 548  Q
    |||| |||||||  ||||| |||||||||| ||  ||||||||| |||||||||| |||||||||||||| |||||||||||||| |||| ||||||  |    
T  15211271 atgtgatttattgattcatgacatgtatatatttggattactctggtttatattctgctgcaactgttgatgtttatatacatgt-tatttgtttttttg 15211173  T
Q  549 aattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  15211172 aattttgaatgtggcgtagcctctatttcatgaataaatgtattattcg 15211124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 487 - 597
Target Start/End: Complemental strand, 33738197 - 33738087
Alignment:
Q  487 attactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaa 586  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||  | ||||| ||||||||||||||||||||||||||||||    
T  33738197 attactctggtttatattccgctgcgactgttgaagtttatatacatgtttattggttttgaatttttggatgtggcgtagcctctatttcttgaataaa 33738098  T
Q  587 tatattcttcg 597  Q
    | |||| ||||    
T  33738097 tttattattcg 33738087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 16330044 - 16330189
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    |||| ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  16330044 atgtgatttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaat 16330143  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  16330144 tttgaataagacgtaatctctatttcttgaataaatgtattattcg 16330189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 34393118 - 34392988
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||||| || |||||||  | ||||| ||| ||||||    
T  34393118 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatggcgt 34393020  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  34393019 agcctctatttcttgaataaatgtattattcg 34392988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 6403662 - 6403775
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  6403662 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 6403761  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  6403762 aaatgtattattcg 6403775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 15289193 - 15289293
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    ||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||| || ||||  ||||||||||||||||||| |||| |||    
T  15289193 tttatattccgctgtgactgttgaggtttatatacatgtctatcgttttttgaattttgaatatgacgtaatctctatttcttgaataaatgtattattc 15289292  T
Q  597 g 597  Q
    |    
T  15289293 g 15289293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16475761 - 16475875
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg-gtttttgaattttgaatgtggcgtagcctctatttcttgaa 582  Q
    ||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||| || ||||  ||||||||||||||    
T  16475761 ttgatcactctgatttatattccgctgcgactgttgaggtttatatacatgtctatcgtttttttgaattttgaatatgacgtaatctctatttcttgaa 16475860  T
Q  583 taaatatattcttcg 597  Q
    ||||| |||| ||||    
T  16475861 taaatgtattattcg 16475875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 15296360 - 15296460
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    ||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||| ||  |||  ||||||||||||||||||| |||| |||    
T  15296360 tttatattccgctgtgactgttgaggtttatatacatgtctatcgttttttgaattttgaatatgaggtaatctctatttcttgaataaatgtattattc 15296459  T
Q  597 g 597  Q
    |    
T  15296460 g 15296460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 473 - 587
Target Start/End: Original strand, 20814153 - 20814267
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    |||||||||| | || |||||| |||||||||||||||| |||||||| |||||||||||||| |||||| |||||||||||| ||| ||  ||| ||||    
T  20814153 acatgtatatttggaatactctggtttatattccgctgcgactgttgaagtttatatacatgtttattgg-ttttgaattttgcatgatgatgtatcctc 20814251  T
Q  572 tatttcttgaataaat 587  Q
    ||||||||||||||||    
T  20814252 tatttcttgaataaat 20814267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 484 - 587
Target Start/End: Original strand, 22356895 - 22356998
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||  | |||| ||||||||||||||||    
T  22356895 ttgatcactctgatttgtattccgctaaaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaacctctatttcttgaat 22356994  T
Q  584 aaat 587  Q
    ||||    
T  22356995 aaat 22356998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 23272306 - 23272436
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaat-gtggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||||| ||  ||||||  | ||||| ||  ||||||    
T  23272306 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaagtttatatacatgttta-aggttttgaatttttgtataatggcgt 23272404  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  23272405 agcctctatttcttgaataaatgtattattcg 23272436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 26337491 - 26337378
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||  | ||||  |||||||||||||||    
T  26337491 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaaatttgaataagacgtaatctctatttcttgaat 26337392  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  26337391 aaatgtattattcg 26337378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 16395865 - 16395994
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | |  |||||| |||||||||||||||| |||||||| |||||||||||||| |||  | ||||||||||||  || || |||    
T  16395865 ttcatgacatgtatatttggtgtactctggtttatattccgctgcgactgttgaagtttatatacatgtttat--ggttttgaattttgtgtgatgacgt 16395962  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  16395963 agcctctatttcttgaataaatgtattattcg 16395994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 467 - 585
Target Start/End: Complemental strand, 30457615 - 30457498
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||| | | ||||||||| |||||||||| |||||||||||||| |||||||||||||| || |||||||  | ||||| |||  | |||    
T  30457615 ttcatgacatgtatctttagattactctggtttatattctgctgcaactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatgtgta 30457517  T
Q  567 gcctctatttcttgaataa 585  Q
    |||||||||||||||||||    
T  30457516 gcctctatttcttgaataa 30457498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 10486680 - 10486568
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||| ||| ||||||||||| | |||||||||||||||||  | ||||  |||||||||||||||    
T  10486680 ttgatcactctgatttatattccgctgtaactgttgagggttacatacatgtcta-tcgtttttgaattttgaataagacgtaatctctatttcttgaat 10486582  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  10486581 aaatgtattattcg 10486568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 13752415 - 13752545
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa-ttttgaatg-tggcg 564  Q
    ||||| |||||||||| |||| |||||  |||||||||||||||  |||||||| |||||||||||||| | |||  ||||||| ||||| ||| || ||    
T  13752415 ttcatgacatgtatattttgagtactcaggtttatattccgctgtgactgttgaagtttatatacatgttttttg--ttttgaatttttgtatgatgacg 13752512  T
Q  565 tagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||| |||| ||||    
T  13752513 tagcctctatttcttgaataaatgtattattcg 13752545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 47355264 - 47355124
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  ||||||||||||||| ||| |||| ||| ||| |||||||||| ||||||||||| ||||    
T  47355264 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgcgactattgaagttcataaacatgtctatcggtttttgaatattga 47355165  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  47355164 ataagacgtaatctctatttcttgaataaatgtattattcg 47355124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 456 - 597
Target Start/End: Original strand, 13050287 - 13050429
Alignment:
Q  456 taatttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatttt 554  Q
    ||||||||||  ||||  ||||||||| || ||| |||||  ||| ||||||| || ||||||||||||||| ||||||||||||  |||||||||||||    
T  13050287 taatttatttgctcatggcatgtatatatttgatcactctgatttgtattccgatgtaactgttgaggtttacatacatgtctatcagtttttgaatttt 13050386  T
Q  555 gaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||   | ||||  ||||||||||||||||||| |||| ||||    
T  13050387 gaaaaagacgtaatctctatttcttgaataaatgtattattcg 13050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 502 - 597
Target Start/End: Complemental strand, 14950007 - 14949911
Alignment:
Q  502 attccgctgcaactgttgaggtttatatacatgtctattgg-tttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| |||||||| ||| |||||||||||||| || ||||||||||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  14950007 attccgctgcgactgttgaagttcatatacatgtctatcggttttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattcg 14949911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 45461155 - 45461285
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||| ||||||  ||| ||||||||||| ||| |||| |||||||||||||| || |||||||  | ||||| ||| || |||    
T  45461155 ttcatgacatgtatattttgagtactctgatttttattccgctgcgacttttgaagtttatatacatgttta-tggttttgaatttttgtatgatgacgt 45461253  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
     ||||||||||||||||||||| |||| ||||    
T  45461254 ggcctctatttcttgaataaatgtattattcg 45461285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 513 - 597
Target Start/End: Original strand, 28266153 - 28266237
Alignment:
Q  513 actgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||| ||||||||||||||  |||||||||  | |||||||||||  ||||||| |||||||||||||||| |||| ||||    
T  28266153 actgttgaagtttatatacatgttcattggttttgaatttttgaatgtgatgtagcctttatttcttgaataaatgtattattcg 28266237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 597
Target Start/End: Original strand, 21961719 - 21961826
Alignment:
Q  490 actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa-ttttgaatg-tggcgtagcctctatttcttgaataaat 587  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||  ||  | ||||||| ||||| ||| ||  ||||||||||||||||||||||||    
T  21961719 actctggtttatattctgctgcaactgttgaagtttatatacatgtgcat--gattttgaatttttgtatgatgatgtagcctctatttcttgaataaat 21961816  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  21961817 gtattattcg 21961826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 12901890 - 12901944
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||||    
T  12901890 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgag 12901944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 592
Target Start/End: Complemental strand, 44344738 - 44344689
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  44344738 ttttgaattttgaatgatggcgtaacctctatttcttgaataaatgtatt 44344689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 592
Target Start/End: Original strand, 18496631 - 18496718
Alignment:
Q  506 cgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||| | ||||||||||||||| ||||| | ||||||||  | ||||| ||| || |||||| |||||||||||||||||| ||||    
T  18496631 cgctgcgaatgttgaggtttatatgcatgtatgttggttttgaatttttgtatgatgacgtagcatctatttcttgaataaatgtatt 18496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 110; Significance: 4e-55; HSPs: 5)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 39254 - 39109
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg-gtttttgaat 551  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  |||||||||    
T  39254 atgtaatttattgcttcataacatgtatatgttgattactctggtttatatttcgctgcaactgttgaggtttatatacatgtttattgtttttttgaat 39155  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  39154 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 39109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 126 - 239
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  126 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 225  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  226 aaatgtattattcg 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 8086 - 8199
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  8086 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 8185  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  8186 aaatgtattattcg 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 467 - 587
Target Start/End: Complemental strand, 3273 - 3153
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||||| ||||||||| |||||||||||| |   |||  ||||| ||||| ||| || |||    
T  3273 ttcatgacatgtatatttggagtactctggtttatattccgctgcgactgttgagatttatatacatg-catgtggagtttgagttttgtatgatgacgt 3175  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||| ||||||||||||||||||    
T  3174 agcatctatttcttgaataaat 3153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 467 - 587
Target Start/End: Complemental strand, 11233 - 11113
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||||| ||||||||| |||||||||||| |   |||  ||||| ||||| ||| || |||    
T  11233 ttcatgacatgtatatttggagtactctggtttatattccgctgcgactgttgagatttatatacatg-catgtggagtttgagttttgtatgatgacgt 11135  T
Q  566 agcctctatttcttgaataaat 587  Q
    ||| ||||||||||||||||||    
T  11134 agcatctatttcttgaataaat 11113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 19764 - 19620
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  |||||  ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19764 atgtaatttattgattcatggcatgtatatgttgattacttttgtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaatt 19665  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  19664 ttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 19620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 105; Significance: 4e-52; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 357 - 501
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  357 atgtaatttattgattcataacatgtacatgttgattactctggtttatattccactgcaactattgaggtttatatacatgtttattggtttttgaatt 456  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    || |||||||||||||||||||||||||||||||| |||| ||||    
T  457 ttaaatgtggcgtagcctctatttcttgaataaatgtattattcg 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 6821 - 6965
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  6821 atgtaatttattgattcataacatgtacatgttgattactctggtttatattccactgcaactattgaggtttatatacatgtttattggtttttgaatt 6920  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    || |||||||||||||||||||||||||||||||| |||| ||||    
T  6921 ttaaatgtggcgtagcctctatttcttgaataaatgtattattcg 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 592
Target Start/End: Complemental strand, 4040 - 3915
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||| | ||||||||| ||||||| ||||  | || |  ||||||||||||||| || |||    
T  4040 ttcatgacatgtatatttggagtactctggtttatattccgctacgactgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatgacgt 3942  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    ||| |||||||||||||||||| ||||    
T  3941 agcatctatttcttgaataaatgtatt 3915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 592
Target Start/End: Complemental strand, 10506 - 10381
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||| | ||||||||| ||||||| ||||  | || |  ||||||||||||||| || |||    
T  10506 ttcatgacatgtatatttggagtactctggtttatattccgctacgactgttgagatttatatgcatgcatgtt-gagtttgaattttgaatgatgacgt 10408  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    ||| |||||||||||||||||| ||||    
T  10407 agcatctatttcttgaataaatgtatt 10381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 473 - 597
Target Start/End: Complemental strand, 27663 - 27539
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctct 572  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27663 acatgtatatgttgattactctggtttatatttcgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgtagcctct 27564  T
Q  573 atttcttgaataaatatattcttcg 597  Q
    ||||||||||||||| |||| ||||    
T  27563 atttcttgaataaatgtattattcg 27539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 104; Significance: 1e-51; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 86401 - 86546
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  86401 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 86499  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  86500 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 86546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 11414 - 11527
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| || | ||  |||||||||||||||    
T  11414 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaatatgacttaatctctatttcttgaat 11513  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  11514 aaatgtattattcg 11527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 453 - 546
Target Start/End: Original strand, 156628 - 156722
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttt 546  Q
    ||||||||||||  |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  156628 atgtaatttattgattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttatcggtttt 156722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 585
Target Start/End: Complemental strand, 91990 - 91872
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || ||||||  ||| ||||||||||| |||||||||| |||||| ||||  | || | |||||||||||||||| || |||    
T  91990 ttcatgacatgtatatttggagtactctgttttttattccgctgcgactgttgaggattatatgcatgcatgtt-gattttgaattttgaatgatgacgt 91892  T
Q  566 agcctctatttcttgaataa 585  Q
    ||| ||||||||||||||||    
T  91891 agcatctatttcttgaataa 91872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 22272931 - 22272785
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||||||||||| |||||| |||||||  ||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22272931 atgtaatttattgcttcatgacatgtaaatattttgattactctggtttatattccgctgcaactgatgaggtttatatacatgtctattggtttttgaa 22272832  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||    
T  22272831 ttttgaatgtggtgtagcctctatttcttgaataaatgtattattcg 22272785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 23806718 - 23806863
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtt-tttgaat 551  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    
T  23806718 atgtaatttattgcttcataacatgtatatgttgcttactctggtttatattccgctgcaactgttgaggtttatatacatgtttattgtttgtttgaat 23806817  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  23806818 tttgaatgtggtgtagcctttatttcttgaataaatgtattattcg 23806863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 12644104 - 12644249
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12644104 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 12644202  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||    
T  12644203 ttttgaatgtggcgtagcctatatttcttgaataaatgtattattcg 12644249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 22282164 - 22282018
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||| || |||||| |||||||  ||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  22282164 atgtaattttttgcttcatgacatgtacatattttgattattctagtttatattccgctgcaactgatgaggtttatatacatgtctcttggtttttgaa 22282065  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22282064 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 22282018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 38707244 - 38707389
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  38707244 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatgtacatgtttattggtttttgaa 38707342  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  38707343 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 38707389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 21139888 - 21139743
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||| ||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  21139888 atgtaatttatttattcacaacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 21139790  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  21139789 ttttgaatgtggcgtatcctctatttcttgaataaatgtattattcg 21139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 456 - 592
Target Start/End: Complemental strand, 22861573 - 22861435
Alignment:
Q  456 taatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattt 553  Q
    |||||||||  ||||| |||||||||| ||  ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  22861573 taatttattgattcatgacatgtatatatttggattactctggtttatattccgttgcaactgttgaggtttatatacatgtttattggttttcgaattt 22861474  T
Q  554 tgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  22861473 tgaatgtggcgtagcctctatttcttgaataaatgtatt 22861435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 23003613 - 23003724
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23003613 gattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggtgtagcctctatttcttgaataa 23003712  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  23003713 atgtattattcg 23003724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 453 - 576
Target Start/End: Original strand, 19889174 - 19889298
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19889174 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 19889272  T
Q  551 ttttgaatgtggcgtagcctctattt 576  Q
    ||||||||||||||||||||||||||    
T  19889273 ttttgaatgtggcgtagcctctattt 19889298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 21276788 - 21276936
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttt---t 547  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||   |    
T  21276788 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttttt 21276886  T
Q  548 gaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  21276887 gaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 21276936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 9655012 - 9655156
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||    
T  9655012 atgtaatttattgattcatgacatgtacatattttgattactctggtttatattccgctg-aactgttgaggtttatatacatgtttattggtttt-gaa 9655109  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9655110 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 9655156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 43645114 - 43645260
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| ||||||| || ||  ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  43645114 atgtaatttattgattcatgacatgtacatatttggattactctggtttatatttcgctgcaactgttgaggtttatatacatgtttatcggtttttgaa 43645213  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  43645214 ttttgaatgtggcgtagcctctatttcctgaataaatgtattattcg 43645260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 8886179 - 8886069
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8886179 gattactctggtttacattccgctgtaactgttgaggtttatatacatgt-tattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 8886081  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  8886080 atgtattattcg 8886069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 453 - 598
Target Start/End: Complemental strand, 22692333 - 22692187
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| || |||||||    
T  22692333 atgtgatttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgaagtttatatacatgtctatcgg-ttttgaa 22692235  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcga 598  Q
    ||||||||||||| |||||||||||| |||||||||| |||| |||||    
T  22692234 ttttgaatgtggcatagcctctatttattgaataaatgtattattcga 22692187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 453 - 598
Target Start/End: Complemental strand, 22696980 - 22696834
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| || |||||||    
T  22696980 atgtgatttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgaagtttatatacatgtctatcgg-ttttgaa 22696882  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcga 598  Q
    ||||||||||||| |||||||||||| |||||||||| |||| |||||    
T  22696881 ttttgaatgtggcatagcctctatttattgaataaatgtattattcga 22696834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 12638437 - 12638582
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  12638437 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttgaa 12638535  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  12638536 ttttgaataagacgtaatctctatttcttgaataaatgtattattcg 12638582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 20629592 - 20629703
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  20629592 gattactctggtttatattccgctgcaactgttgagatttatatacatgttttttgttttttgaattttgaatgtggcgtagcctgtatttcttgaataa 20629691  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  20629692 atgtattattcg 20629703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 3801561 - 3801708
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctat--tggtttttga 549  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||  |  |||||||    
T  3801561 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtctatcgttttttttga 3801660  T
Q  550 attttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||| || ||||  ||||||||||||||||||| |||| ||||    
T  3801661 attttgaatatgacgtaatctctatttcttgaataaatgtattattcg 3801708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 473 - 597
Target Start/End: Complemental strand, 15631376 - 15631253
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctct 572  Q
    |||||||||| | |||| ||||  ||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||  ||| |||||    
T  15631376 acatgtatatttggattcctctgatttatattccgctgctactgttgaagtttatatacatgtttattgg-ttttgaattttgaatgtgatgtaacctct 15631278  T
Q  573 atttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||| ||||    
T  15631277 atttcttgaataaatatattattcg 15631253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 24687818 - 24687931
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  24687818 ttgatcactctgatttatattccgctgcgactgttgaggtttatatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 24687917  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  24687918 aaatgtattattcg 24687931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 25210620 - 25210507
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||  | ||||  |||||||||||||||    
T  25210620 ttgatcactctgatttatattccgctgcaactgttgaggtttatatacatgtctatcgatttttgaattttgaataagacgtaatctctatttcttgaat 25210521  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  25210520 aaatgtattattcg 25210507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 36892885 - 36893016
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| ||||||||| |||||| ||| ||||||||||||||||||| ||||| ||||||||||||  ||| || |||    
T  36892885 ttcatgacatgtatatttggattactctggtttatattgcgctgcgactattgaggtttatatacatgtttattgttttttgaattttagatgatgacgt 36892984  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||| |||| ||||    
T  36892985 agcctctatttattgaataaatgtattattcg 36893016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 8941439 - 8941326
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  8941439 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 8941340  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  8941339 aaatgtattattcg 8941326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 11233400 - 11233513
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  11233400 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 11233499  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  11233500 aaatgtattattcg 11233513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 22515247 - 22515360
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  22515247 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 22515346  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  22515347 aaatgtattattcg 22515360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 23818187 - 23818074
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  23818187 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 23818088  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  23818087 aaatgtattattcg 23818074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 28777849 - 28777962
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  28777849 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 28777948  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  28777949 aaatgtattattcg 28777962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 24828753 - 24828868
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg--gtttttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||| |   | |||||   |||||||||||||||||||||||||||||||||||||||    
T  24828753 ttgatcactctggtttatattccgctgcgactgttgaggtttatatgccattttattgttttttttgaattttgaatgtggcgtagcctctatttcttga 24828852  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  24828853 ataaatgtattattcg 24828868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 484 - 587
Target Start/End: Original strand, 14908587 - 14908690
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  14908587 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 14908686  T
Q  584 aaat 587  Q
    ||||    
T  14908687 aaat 14908690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 23772544 - 23772431
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  23772544 ttgatcactctgatttatattccgctgtaaccgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 23772445  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  23772444 aaatgtattattcg 23772431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 23837539 - 23837649
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaata 584  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||   | |||||||||||| ||| || ||||||||||||||||||||||    
T  23837539 gattactctggtttatattccgctgcgactgttgaggtttatatacatgttta--cggttttgaattttgtatgatgacgtagcctctatttcttgaata 23837636  T
Q  585 aatatattcttcg 597  Q
    ||| |||| ||||    
T  23837637 aatgtattattcg 23837649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 24833205 - 24833318
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| ||||| ||||||||| |||||| ||||||||||||||||| |  || ||||  |||||  ||||||||||||||||||||||||||||||||||    
T  24833205 ttgatcactctggtttatatttcgctgcgactgttgaggtttatatgccggtttatttttttttttattttgaatgtggcgtagcctctatttcttgaat 24833304  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  24833305 aaatgtattattcg 24833318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 592
Target Start/End: Complemental strand, 20013129 - 20013021
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  20013129 ttgatcactctgatttatattccgctgtaactgttaaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 20013030  T
Q  584 aaatatatt 592  Q
    |||| ||||    
T  20013029 aaatgtatt 20013021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 490 - 597
Target Start/End: Complemental strand, 460560 - 460449
Alignment:
Q  490 actctagtttatattccgctgcaactgttgaggtttatatacatgtctattg----gtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||| |||||     ||||| |||||||||||||| ||| ||||||||||||||||||    
T  460560 actctggtttatattccattgcaactgttgaggtttatatacatgtttattgttttttttttaaattttgaatgtggtgtaacctctatttcttgaataa 460461  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  460460 atgtattattcg 460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 467 - 592
Target Start/End: Original strand, 4450427 - 4450552
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | |  ||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||  | ||||| ||| || |||    
T  4450427 ttcatgacatgtatatttggtgtactctagtttatattccgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtatgatgacgt 4450525  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||| ||||    
T  4450526 agcctctatttcttgaataaatgtatt 4450552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 33126061 - 33125961
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| |||||||||| |||| |||||||||||| ||||||||||||||| ||  | | ||  ||||||||||||||||||| |||| |||    
T  33126061 tttatattccgctgtaactgttgagatttacatacatgtctatcggtttttgaattttgtataagacttaatctctatttcttgaataaatgtattattc 33125962  T
Q  597 g 597  Q
    |    
T  33125961 g 33125961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 17398745 - 17398858
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||  ||| |||||||||||| ||||||||||||||||||  | | ||  |||||||| ||||||    
T  17398745 ttgatcactctgatttatattccgctgtaactgttgagaattacatacatgtctatcggtttttgaattttgaataagacataatctctatttgttgaat 17398844  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  17398845 aaatgtattattcg 17398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 28969940 - 28969810
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||||||||||| ||||||||  ||||||| ||||  | || |  ||||||||||||||| || |||    
T  28969940 ttcatgacatgtatatttggaatactctggtttatattccgctgcgactgttgaaatttatatgcatgcatgtt-gagtttgaattttgaatgatgacgt 28969842  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  28969841 agcatctatttcttgaataaatgtattattcg 28969810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 597
Target Start/End: Complemental strand, 6877454 - 6877335
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtt-tatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    ||||||||| | ||||||||| |||||||||||||||  ||||||||| || ||||| ||||       || ||||||||||||||| ||||||||||||    
T  6877454 catgtatatttggattactctggtttatattccgctgtgactgttgagattatatatgcatgc------gtgtttgaattttgaatgatggcgtagcctc 6877361  T
Q  572 tatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||| ||||    
T  6877360 tatttcttgaataaatgtattattcg 6877335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 34822028 - 34821913
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggttt--ttgaattttgaatgtggcgtagcctctatttcttga 581  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| | |||  ||  |||||||||  | ||||  |||||||||||||    
T  34822028 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcgtttttattttattttgaataagacgtaatctctatttcttga 34821929  T
Q  582 ataaatatattcttcg 597  Q
    |||||| |||| ||||    
T  34821928 ataaatgtattattcg 34821913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 12726055 - 12725939
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtcta---ttggtttttgaattttgaatgtggcgtagcctctatttcttg 580  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||   ||  ||||| ||||||||||  | ||||  ||||||||||||    
T  12726055 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcgttttttttttaattttgaataagacgtaatctctatttcttg 12725956  T
Q  581 aataaatatattcttcg 597  Q
    ||||||| |||| ||||    
T  12725955 aataaatgtattattcg 12725939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 597
Target Start/End: Original strand, 25422333 - 25422402
Alignment:
Q  528 atacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  25422333 atacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaataaatgtattattcg 25422402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 539 - 597
Target Start/End: Original strand, 25878220 - 25878279
Alignment:
Q  539 ttggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||  ||||||||||| || ||||||||||||||||||||||||| |||| ||||    
T  25878220 ttggttttgaaattttgaatgatgccgtagcctctatttcttgaataaatgtattattcg 25878279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 17277 - 17147
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17277 ttcatagcatgtatatgttgattactctggtttatattccgctgcgactgttgaggtttatatacatgtttattagtttttgaattttgaatgtggcgta 17178  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  17177 gcctctatttcttgaataaatgtattattcg 17147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 21602 - 21746
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  21602 atgtaatttattgattcataacatgtatatgttgattactctggtttatattccgctgcaactgttgaggtttatatacatgtttataagtttttgaatt 21701  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||| || || ||||||||||||||||||||||| |||| ||||    
T  21702 ttgaaagtagcatagcctctatttcttgaataaatgtattattcg 21746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 5081 - 5227
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  5081 atgtaatttattgattcatgacatgtatatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgat 5180  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  5181 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 5227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 100; Significance: 4e-49; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 12177 - 12322
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  12177 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgacggttgaggtttatatacatgtttattggtttttgaa 12275  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  12276 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 5066 - 4933
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg--gtttttgaattttgaatg-tggc 563  Q
    ||||| ||||||||||||||| |||  | |||||||||||||||| ||||||||  ||||||||||||| || ||   ||||||||||||||||| |||     
T  5066 ttcatgacatgtatatgttgagtaccatggtttatattccgctgcgactgttgaattttatatacatgtttaatgttttttttgaattttgaatgatggt 4967  T
Q  564 gtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||| |||| ||||    
T  4966 gtagcctctatttcttgaataaatgtattattcg 4933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 453 - 528
Target Start/End: Complemental strand, 77 - 1
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgat-tactctagtttatattccgctgcaactgttgaggtttata 528  Q
    ||||||||||||| | |||||||||||||| |  || |||||| |||||||||||||||| ||||||||||||||||    
T  77 atgtaatttatttatccataacatgtatatttgaatctactctggtttatattccgctgcgactgttgaggtttata 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 28329 - 28184
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  28329 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggattttgaa 28231  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  28230 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 28184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 28767 - 28622
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  28767 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggattttgaa 28669  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  28668 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 28622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 49921 - 50067
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  49921 atgtaatttattgattcatgacatgtatatatttggattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgat 50020  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  50021 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 50067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 184190 - 184045
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||| |||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  184190 atgtaatttatttattcttaacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 184092  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  184091 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 184045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 15479 - 15338
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  15479 atttatttgttcatgacatgtacatattttgattactctggtttatattccgctgcaactgttgaggtttacatacatgtctatcggtttttgaattttg 15380  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  15379 aatgtggcgtagcctctatttcttgaataaatgtattattcg 15338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 14413 - 14543
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||| | |||| |||||| |||||||||||||||| |||| |||| ||||||| ||||  |  | |  ||||||||||||||| || |||    
T  14413 ttcatgacatgtatcttttgagtactctggtttatattccgctgcgactgctgagatttatatgcatgcatgat-gagtttgaattttgaatgatgacgt 14511  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  14512 agcatctatttcttgaataaatgtattattcg 14543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 703 - 848
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  703 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaat 802  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  803 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 1065 - 919
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  |||||||||||||||| ||  ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  1065 atgtaatttattgattcataacatgtatatatttggattactctggtttatattccgttgcaactgttgaggtttatatacatgtttattggtttttgaa 966  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    | ||||||||||||||||||||||||||| ||||||| |||| ||||    
T  965 tattgaatgtggcgtagcctctatttcttaaataaatgtattattcg 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 11489 - 11635
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||| ||  ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  11489 atgtaatttattgattcatgacatatacatattttgattactctggtttatattcagctgcaactgttgaggtttatatacatgtttattggtttttgaa 11588  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11589 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 11635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 7520 - 7665
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||| ||||| ||||  ||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  7520 atgtaatttatttattcataacatttatat-ttgaatttactctggtttatattccgctgcgactattgaggtttatatacatgtttattggtttttgaa 7618  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  7619 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 7665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 54 - 200
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54 atgtaatttattgattcatgacatgtacatattttgattactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaa 153  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| ||| |||||||||||||||||||| |||| ||||    
T  154 ttttgaatgtggagtaacctctatttcttgaataaatgtattattcg 200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 96; Significance: 9e-47; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 470 - 597
Target Start/End: Original strand, 15521 - 15648
Alignment:
Q  470 ataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcc 569  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15521 ataacatgtatatgttgattactctggtttatattctgctacaactattgaggtttatatacatgtttattggtttttgaattttgaatgtggcgtagcc 15620  T
Q  570 tctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||| |||| ||||    
T  15621 tctatttcttaaataaatgtattattcg 15648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 26197 - 26052
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| | |||||| ||||||||||||||   |||||||||||||    
T  26197 atgtaatttattgattcataacatgtatacttggatttactctggtttatattccgctgcgattgttgatgtttatatacatgttatttggtttttgaat 26098  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  26097 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 26052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 249629 - 249775
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| |||||||||| ||  ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||    
T  249629 atgtaatttattgattcatgacatgtatatatttggattactctggtttatattccgttgcaactgttgaggtttatatacatgtttattggttttcgaa 249728  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  249729 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 249775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 9e-47; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 473 - 592
Target Start/End: Original strand, 129325 - 129444
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctct 572  Q
    |||| ||||| | ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  129325 acatatatatttggattactctagtttatattacgctgtaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctct 129424  T
Q  573 atttcttgaataaatatatt 592  Q
    ||||||||||||||| ||||    
T  129425 atttcttgaataaatgtatt 129444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 72590 - 72701
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  72590 gattactctggtttatatttcgctgtaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 72689  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  72690 atgtattattcg 72701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 76971 - 77082
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  76971 gattactctggtttatatttcgctgtaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 77070  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  77071 atgtattattcg 77082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 192535 - 192389
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  |||||||||||||||| ||  ||||||||| |||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||    
T  192535 atgtaatttattgattcataacatgtatatatttggattactctggtttatattccgttgcaactgttgaggttaatatatatgtttattggtttttgaa 192436  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    | ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  192435 tattgaatgtggcatagcctctatttcttgaataaatgtattattcg 192389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 257084 - 257128
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgc 511  Q
    ||||| |||||||||| | ||||||||| ||||||||||||||||    
T  257084 ttcatgacatgtatatttggattactctggtttatattccgctgc 257128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 96; Significance: 9e-47; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 270063 - 269932
Alignment:
Q  467 ttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgt 565  Q
    ||||| |||||||||| | |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  270063 ttcatgacatgtatatttggatttactctggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgt 269964  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  269963 agcctctatttcttgaataaatgtattattcg 269932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 597
Target Start/End: Complemental strand, 235941 - 235819
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctct 572  Q
    ||||||||| | ||||||||| |||||||||||||||| |||||||| | |||||||||||| |  |||||||  | ||||| ||| || ||||||||||    
T  235941 catgtatatttggattactctggtttatattccgctgcgactgttgaag-ttatatacatgt-ttgtggttttgaatttttgtatgatgacgtagcctct 235844  T
Q  573 atttcttgaataaatatattcttcg 597  Q
    | ||||||||||||| |||| ||||    
T  235843 acttcttgaataaatgtattattcg 235819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 236166 - 236120
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttga 520  Q
    ||||||||| | ||||||||| |||||||||||||||| ||||||||    
T  236166 catgtatatttggattactctggtttatattccgctgcgactgttga 236120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 10267 - 10122
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||| ||||||  |||||||||||||||  | |||| ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  10267 atgtagtttattgattcataacatgtatacttggatttactctagtttatattccgcagcaactgttgaggttcatatacatgtcttttggtttttgaat 10168  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  10167 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 10122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 19692 - 19547
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||| ||||||  |||||||||||||||  | |||| ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  19692 atgtagtttattgattcataacatgtatacttggatttactctagtttatattccgcagcaactgttgaggttcatatacatgtcttttggtttttgaat 19593  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  19592 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 19547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 552 - 407
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  552 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgattgttgaggtttatatacatgtttattggtttttgaa 454  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||| ||||| |||||||||||||||||||||||||| |||| ||||    
T  453 tttttaatgttgcgtagcctctatttcttgaataaatgtattattcg 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 14182 - 14327
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||| ||||  ||||  ||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  14182 atgtaatttatttattcataacatatataa-ttgaatttactctggtttatattccgctgcgacagttgaggtttatatacatgtttattggtttttgaa 14280  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  14281 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 14327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 2202 - 2069
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattg--gtttttgaattttgaatg-tggc 563  Q
    ||||| ||||||||||||||| |||  | |||||||||||||||| ||||||||  ||||||||||||| || ||   ||||||||||||||||| |||     
T  2202 ttcatgacatgtatatgttgagtaccatggtttatattccgctgcgactgttgaattttatatacatgtttaatgttttttttgaattttgaatgatggt 2103  T
Q  564 gtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||| |||| ||||    
T  2102 gtagcctctatttcttgaataaatgtattattcg 2069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 10041 - 10186
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  10041 atgtgatttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgaggtttatatacatgtctatcgg-ttttgaa 10139  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  10140 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 13342 - 13487
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||| ||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  13342 atgtaatttatttattcataacatctatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgatttttgaa 13440  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  13441 tttcgaatgtggcgtagcctctatttcttgaataaatgtattattcg 13487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 36138 - 36027
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36138 gattactttggtttatattccgctgcaactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 36039  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  36038 atgtattattcg 36027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 39723 - 39836
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  39723 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 39822  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  39823 aaatgtattattcg 39836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 217870 - 218016
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||  ||||| |||||||||| ||  ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  217870 atgtgatttattgattcatgacatgtatatatttggattactctggtttatattccgctgcaaccgttgaggtttatatacatgtttattgatttttgaa 217969  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  217970 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 218016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 4938 - 4825
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  4938 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 4839  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  4838 aaatgtattattcg 4825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 91; Significance: 8e-44; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 7272 - 7412
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  7272 atttatttgttcatgacatgtacatattttgattactctggtttatattccgctgcaactgttgaggtttatatacatgtctatcgg-ttttgaattttg 7370  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||||||||||||| |||| ||||    
T  7371 aatgtggcgtaacctctatttcttgaataaatgtattattcg 7412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 59559 - 59699
Alignment:
Q  458 atttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttg 555  Q
    |||||||| ||||| |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  59559 atttatttgttcatgacatgtacatattttgattactctggtttatattccgctgcaactgttgaggtttatatacatgtctatcgg-ttttgaattttg 59657  T
Q  556 aatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||||||||||||| |||| ||||    
T  59658 aatgtggcgtaacctctatttcttgaataaatgtattattcg 59699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 46065 - 46209
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||| ||||||  |||||||||||||||  | |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  46065 atgtactttattgattcataacatgtatacttggatttactctagtttatattccgctgcgactgttgaggtttatatacatgtttattg-tttttgaat 46163  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  46164 tttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 46209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 37498 - 37368
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| || |||    
T  37498 ttcatgacatgtatatttggattactcttgtttatattccgctgcgactgttgagatttatatacatgtttattgg-ttttgaattttgaatgatgacgt 37400  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||| ||||||| |||| ||||    
T  37399 agcctctatttcttaaataaatgtattattcg 37368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 77346 - 77204
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||||| ||||||||||||||||||||  ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||    
T  77346 atgtaatttattgattcatgacatgtatatgttgattact--agtttatattccgctgcgactgttacggtttatatacatgtttattggtttttgaatt 77249  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||||||||||||| || |||| ||||    
T  77248 ttgaatgtggtgtagcctctatttcttgaatagatgtattattcg 77204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 26920 - 26775
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  26920 atgtaatttattgattcataacatgtatacttggatttactcttgtttatattccgctgcgattgttgaggtttatatacatgtttattggtttttgaat 26821  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||    
T  26820 tttgaatgtgacgtagcctctatttcttgaataaatgtattattcg 26775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 66632 - 66772
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    |||||||| |||||  ||||||||| || ||| |||||  ||| |||||||||| ||| |||||| |||| |||||||||||| |||||||||||||| |    
T  66632 atttatttgttcatggcatgtatatatttgatcactctgatttgtattccgctgtaaccgttgagatttagatacatgtctatcggtttttgaattttaa 66731  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  66732 ataagacgtaatctctatttcttgaataaatgtattattcg 66772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 3340 - 3484
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    ||||||||||||  ||| | |||||||||| | ||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||    
T  3340 atgtaatttattgattcttgacatgtatatttggattactctggtttatattccgccgcgactgttgaggtttatatacatgtttattggtttttgattt 3439  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  3440 ttgaatgtggtgtagcctctatttcgtgaataaatatattattcg 3484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 452 - 597
Target Start/End: Original strand, 17328 - 17474
Alignment:
Q  452 aatgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttga 549  Q
    |||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||| |||||||| | |||||||||||| |||||||||||||    
T  17328 aatgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaagattatatacatgtttattggtttttga 17426  T
Q  550 attttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||||||| ||||||| |||| ||||    
T  17427 attttgaatgtggcgtagcctatatttcttaaataaatgtattattcg 17474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 294 - 148
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||||||||| |  ||||| |||||||||| ||  ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  294 atgtaatttactgattcatgacatgtatatatttggattactctggtttatatttcgctgcaactgttgaggtttatatacatgtttattggtttttaaa 195  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||    
T  194 ttttgaatgtggtgtagcctctatttcttgaataaatttattattcg 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 14345 - 14200
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    |||| |||||||| ||||| |||||||  ||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  | |||||||    
T  14345 atgtgatttatttgttcatgacatgtacatattttgattactctggtttatattccgctgtaactgttgaggtttatatacatgtctatcag-ttttgaa 14247  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  14246 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 14200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 479 - 597
Target Start/End: Complemental strand, 27841 - 27724
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  27841 atattttgattactctggtttatattccgctgtaactgttgaggtttatatacatgtctatcgg-ttttgaattttgaatgtggtgtagcctctatttct 27743  T
Q  579 tgaataaatatattcttcg 597  Q
    ||||||||| |||| ||||    
T  27742 tgaataaatgtattattcg 27724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 53697 - 53552
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| ||||||| || ||  ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  53697 atgtaatttattgattcatgacatgtacatatttggattactctggtttatattccgctgcaactattgaggtttatatacatgtttattgg-ttttgaa 53599  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  53598 ttttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 53552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1388 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold1388
Description:

Target: scaffold1388; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 453 - 592
Target Start/End: Complemental strand, 1764 - 1624
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||| |||||| |||||||||| |||| ||||||| ||||||||||||||    
T  1764 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatatttcgctgcgactgttgaggcttatgtacatgtttattggtttttgaa 1666  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatatt 592  Q
    || |||||||||||||||||||||||||||||||||| ||||    
T  1665 ttctgaatgtggcgtagcctctatttcttgaataaatgtatt 1624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 486 - 587
Target Start/End: Original strand, 7369 - 7470
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7369 gattactctggtttatattccgctgtaactgttgaggtttatatacatgtttattggtttttgaattttgaaagtggcgtagcctctatttcttgaataa 7468  T
Q  586 at 587  Q
    ||    
T  7469 at 7470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 53744 - 53889
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgatt-actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat 551  Q
    ||||||||||||  |||||||||||||||  | |||| ||||| |||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  53744 atgtaatttattgattcataacatgtatacttggatttactctggtttattttccactgcgactgttgaggtttatatacatgtttattggtttttgaat 53843  T
Q  552 tttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||    
T  53844 tttgaatgtggtgtagcctctatttcttgaataaatgtattattcg 53889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 24548 - 24692
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatt 552  Q
    |||| |||||||  ||||| | |||||||| |  |||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  24548 atgtgatttattgattcatgaaatgtatatttgtattactctggtttatattccgctacgactgttgaggtttatatacatgtttattggtttttgaatt 24647  T
Q  553 ttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  24648 ttgaatgtggcatagcctctatttcttgaataaatgtattattcg 24692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 485 - 597
Target Start/End: Complemental strand, 44150 - 44038
Alignment:
Q  485 tgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaata 584  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  44150 tgattactctggtttatattccgctgcaaatgttgaggtttatatacatgtttatcggtttttgaattttgaatgtggcgtaacctctatttcttgaata 44051  T
Q  585 aatatattcttcg 597  Q
    ||| |||| ||||    
T  44050 aatgtattattcg 44038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 597
Target Start/End: Complemental strand, 30382 - 30257
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    |||||||||| | ||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  30382 acatgtatatttggattactcagatttatattccgctgcgactgttggggtttatatacatgtttattggtttttgaattttggatgatggcgtagcctc 30283  T
Q  572 tatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||| ||||    
T  30282 tatttcttgaataaatgtattattcg 30257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 30865 - 30720
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||| |||||||||||| ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30865 atgtaatttatttattcttaacatgtatat-ttgaatttactctggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaa 30767  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||| | |  ||||||||||||||||||||||| |||| ||||    
T  30766 ttttgaattttgtttagcctctatttcttgaataaatgtattattcg 30720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 51074 - 50928
Alignment:
Q  453 atgtaatttatttcttcataacatgta--tatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||||| |||||||  ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  51074 atgtaatttatttgttcatgacatgtacatattttgattactctggtttatattccgctgcaaatgttgaggtttatatacatgtctatcggtttttgaa 50975  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||| ||  |||  ||||||||||||||||||| |||| ||||    
T  50974 ttttgaatttgttgtattctctatttcttgaataaatgtattattcg 50928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 20507 - 20360
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttga--ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttg-- 548  Q
    ||||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| |||||       
T  20507 atgtaatttatttattcataacatgtatat-ttgaatttactctggtttatattccgctgcaactgttgaagtttatattcatgtttattgttttttttt 20409  T
Q  549 aattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  20408 aattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 20360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 16110 - 15980
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgta 566  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  |     
T  16110 ttcatgacatgtatatttggattactttggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggtttt 16011  T
Q  567 gcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||| |||| ||||    
T  16010 gcctctatttcttgaataaatgtattattcg 15980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 488 - 597
Target Start/End: Original strand, 13314 - 13422
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaat 587  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  13314 ttactctggtttatattccgctgcaactgttgaggtttatatacatgt-tatcggtttttgaattttgaatgtggcctagcctctatttcttgaataaat 13412  T
Q  588 atattcttcg 597  Q
     |||| ||||    
T  13413 gtattattcg 13422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 488 - 586
Target Start/End: Original strand, 5726 - 5823
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaa 586  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5726 ttactctggtttatattccgtggcaactgttgaagtttatatacatgt-tatcggtttttgaattttgaatgtggcctagcctctatttcttgaataaa 5823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 486 - 591
Target Start/End: Complemental strand, 27979 - 27872
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatataca--tgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27979 gattactctggtttatattccgctgtaactgtcgaggtttatatacacatgtttattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 27880  T
Q  584 aaatatat 591  Q
    ||||||||    
T  27879 aaatatat 27872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1610 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold1610
Description:

Target: scaffold1610; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 348 - 493
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttg--attactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| ||||||| || ||   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | |||||||    
T  348 atgtaatttattgattcatgacatgtacatatttgtattactctagtttatattccgttgcaactgttgaggtttatatacatgtttatt-gattttgaa 446  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||    
T  447 tttttaatgtggcgtagcctctatttcttgaataaatgtattattcg 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1605 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold1605
Description:

Target: scaffold1605; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 597
Target Start/End: Complemental strand, 1231 - 1086
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgttg--attactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||  ||||| ||||||| || ||   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | |||||||    
T  1231 atgtaatttattgattcatgacatgtacatatttgtattactctagtttatattccgttgcaactgttgaggtttatatacatgtttatt-gattttgaa 1133  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||    
T  1132 tttttaatgtggcgtagcctctatttcttgaataaatgtattattcg 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 597
Target Start/End: Original strand, 19722 - 19868
Alignment:
Q  453 atgtaatttatttcttcataacatgtatatgtt--gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa 550  Q
    ||||||||||||| ||||  ||||||| || ||  ||||||||| |||||||||||| ||||||||||| ||||||||||||||| |||||  |||||||    
T  19722 atgtaatttatttattcacgacatgtacatatttggattactctggtttatattccgttgcaactgttggggtttatatacatgtttattgaattttgaa 19821  T
Q  551 ttttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  19822 ttttgaatgtggcctagcctctatttcttgaataaatgtattattcg 19868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 479 - 597
Target Start/End: Complemental strand, 3851 - 3733
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||    
T  3851 atattttgattactctggtttatattccgctgcaactgttgagatttatatacatgtctatcggtttttgaattttggaagtgtcgtagcctctatttct 3752  T
Q  579 tgaataaatatattcttcg 597  Q
    ||||| ||| |||| ||||    
T  3751 tgaattaatgtattattcg 3733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 503 - 597
Target Start/End: Original strand, 83742 - 83836
Alignment:
Q  503 ttccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  83742 ttccgctgcgactgttgaggtttatatacatgtttattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 83836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 467 - 598
Target Start/End: Complemental strand, 59606 - 59475
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||| ||||||    
T  59606 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaggtttatatacatgtttattgg-ttttgaattttaaatgatggcgt 59508  T
Q  566 agcctctatttcttgaataaatatattcttcga 598  Q
    ||||||||||| |||||||||| |||| |||||    
T  59507 agcctctatttattgaataaatgtattattcga 59475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 77; Significance: 2e-35; HSPs: 5)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 130339 - 130463
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctct 572  Q
    |||||||||| | ||||||||||||||||||||| || | ||||||||| |||||||| |||| ||| ||||||||| ||||||||||||||||||||||    
T  130339 acatgtatatttggattactctagtttatattccactacgactgttgagatttatatatatgtttatcggtttttgatttttgaatgtggcgtagcctct 130438  T
Q  573 atttcttgaataaatatattcttcg 597  Q
    ||||||||||||||| |||| ||||    
T  130439 atttcttgaataaatgtattattcg 130463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 473 - 585
Target Start/End: Original strand, 133933 - 134045
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctct 572  Q
    |||||||||| | ||||||||| |||||||||||||||| ||||||||| |||||| |||||| ||| ||||||| | ||||||||||||||||||||||    
T  133933 acatgtatatttggattactctggtttatattccgctgcgactgttgagatttataaacatgtttatcggttttttatttttgaatgtggcgtagcctct 134032  T
Q  573 atttcttgaataa 585  Q
    |||||||||||||    
T  134033 atttcttgaataa 134045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 20614 - 20485
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| ||||||||||| |||| |||||||| |||||||||||||| |||  | |||||||||||| ||| || |||    
T  20614 ttcatgacatgtatatttcgattactctggtttatattccactgcgactgttgaagtttatatacatgtttat--ggttttgaattttgtatgatgacgt 20517  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    | |||||||||||||||||||| |||| ||||    
T  20516 aacctctatttcttgaataaatgtattattcg 20485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 28189 - 28060
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||  |||||||||||||  |||  | |||||||||||| ||| || |||    
T  28189 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttggagtttatatacatgattat--ggttttgaattttgtatgatgacgt 28092  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||| |||| ||||    
T  28091 agcctctattgcttgaataaatgtattattcg 28060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 484 - 558
Target Start/End: Original strand, 33994 - 34068
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaat 558  Q
    ||||| |||||  ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  33994 ttgatcactctgatttatattccgctgcgactgttgaggtttacatacatgtctatcggtttttgaattttgaat 34068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 486 - 597
Target Start/End: Complemental strand, 12287 - 12177
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  12287 gattactctggtttatattccgctgcaactgttgaggtttatatacatct-tatcggtttttgaattttgcatgtggcgtaacctctatttcttgaataa 12189  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  12188 atgtattattcg 12177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 24845 - 24976
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| ||||||||||| | ||  |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  24845 ttcatgacatgtatatttggattactctggtttatattccacagcgcctgttgaggtttatatacatgtttattggtttttgaattttggatgatggcgt 24944  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  24945 agcctctatttcttgaataaatgtattattcg 24976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 487 - 597
Target Start/End: Original strand, 29796 - 29905
Alignment:
Q  487 attactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaa 586  Q
    |||||||| |||||||||||| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  29796 attactctggtttatattccgttgcgactgttgaggtttatatacatgtttat-gatttttgaattttgaatgtggcgtagcctctatttcttgaataaa 29894  T
Q  587 tatattcttcg 597  Q
    | |||| ||||    
T  29895 tgtattattcg 29905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 503
Target Start/End: Complemental strand, 26611 - 26575
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatat 503  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  26611 ttcatgacatgtatatgttgagtactctagtttatat 26575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 467 - 575
Target Start/End: Original strand, 91290 - 91399
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    |||||||||||||||| | ||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||    
T  91290 ttcataacatgtatatttggattactctggtttatattccgctgcgactgttgaggtttatataaatgtttattggtttttgaattttggatgatggcgt 91389  T
Q  566 agcctctatt 575  Q
    ||||||||||    
T  91390 agcctctatt 91399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 486 - 597
Target Start/End: Original strand, 970 - 1081
Alignment:
Q  486 gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataa 585  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  970 gattactctgatttatatttcgctgtaactgttgaggtttatatacatgttaattggttttttaattttgaatgtggtgtagcctctatttcttgaataa 1069  T
Q  586 atatattcttcg 597  Q
    || |||| ||||    
T  1070 atgtattattcg 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 490 - 597
Target Start/End: Complemental strand, 90453 - 90346
Alignment:
Q  490 actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatat 589  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||||  ||||||||||||||||||| |    
T  90453 actctggtttatattccgctgcgactgttgaggtttatatacatgtctatcggtttttgaattttgaatatgacgtaatctctatttcttgaataaatgt 90354  T
Q  590 attcttcg 597  Q
    ||| ||||    
T  90353 attattcg 90346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 474 - 597
Target Start/End: Original strand, 26930 - 27053
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctct 572  Q
    ||||||||| |||| |||||| |||||||||||||||  |||||||| |||||||||||||| |||||| |||| ||||||| ||| || ||||||||||    
T  26930 catgtatattttgagtactctggtttatattccgctgtgactgttgaagtttatatacatgtttattgg-ttttaaattttggatgatgacgtagcctct 27028  T
Q  573 atttcttgaataaatatattcttcg 597  Q
    ||||||||||||||| |||| ||||    
T  27029 atttcttgaataaatgtattattcg 27053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 467 - 598
Target Start/End: Original strand, 66853 - 66984
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||| |||||||| |||| ||||||||| || |||||||  | ||||| ||| |||| |    
T  66853 ttcatgacatgtatattttgattactctggtttatattccgctgcgactgttgaagtttttatacatgttta-tggttttgaatttttgtatgatggcat 66951  T
Q  566 agcctctatttcttgaataaatatattcttcga 598  Q
    |||||||||||||||||||||| |||| |||||    
T  66952 agcctctatttcttgaataaatgtattattcga 66984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 138935 - 139065
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||| ||| |||| |    
T  138935 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaggtttatatgcatgtttattgg-ttttgaattttggatgatggcat 139033  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  139034 agcctctatttcttgaataaatgtattattcg 139065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 76325 - 76195
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| ||||||||||| |||  |||||| | |||||||||||||| |||||| |||| ||||||| ||| ||  ||    
T  76325 ttcatgacatgtatatttcgagtactctggtttatattccactgtgactgttaaagtttatatacatgtttattgg-ttttaaattttggatgatgatgt 76227  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  76226 agcctctatttcttgaataaatgtattattcg 76195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 592
Target Start/End: Complemental strand, 2785 - 2660
Alignment:
Q  468 tcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgta 566  Q
    |||| |||||||||| | ||||||||   ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| ||| ||| |||    
T  2785 tcatgacatgtatatttggattactcagatttatattccgctgcgactgttgaggtttatattcatgtttattggtttttgaattttggatgatggtgta 2686  T
Q  567 gcctctatttcttgaataaatatatt 592  Q
    ||||||||||||||||||||| ||||    
T  2685 gcctctatttcttgaataaatgtatt 2660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 473 - 587
Target Start/End: Complemental strand, 12225 - 12111
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctc 571  Q
    |||||||||| | ||||||||| ||||| |||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||| || |||||||||    
T  12225 acatgtatatttggattactctggtttaaattccgctgtgactgttgaggtttatatacatgtttattgg-ttttgaattttgaatgatgacgtagcctc 12127  T
Q  572 tatttcttgaataaat 587  Q
    ||||||||||||||||    
T  12126 tatttcttgaataaat 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 479 - 597
Target Start/End: Original strand, 5606 - 5723
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| || |||||||||||    
T  5606 atattttgatcactctgatttatattccgctgtaactgttgaggtttatatacatgtctatccg-ttttgaattttgaatgtggcataacctctatttct 5704  T
Q  579 tgaataaatatattcttcg 597  Q
    ||||||||| |||| ||||    
T  5705 tgaataaatgtattattcg 5723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 17531 - 17644
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  | ||||  |||||||||||||||    
T  17531 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctattggtttttgaattttgaataagacgtaatctctatttcttgaat 17630  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  17631 aaatgtattattcg 17644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 17998 - 18111
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||||  |||||||||||||||    
T  17998 ttgatcactctgatttatattccgttgcgactgttgaggtttatatacatgtctatcggtttttgaattttgaatatgacgtaatctctatttcttgaat 18097  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  18098 aaatgtattattcg 18111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 24937 - 24797
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  24937 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttga 24838  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  24837 ataagacgtaatctctatttcttgaataaatgtattattcg 24797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 20682 - 20542
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||    
T  20682 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctataactgttgaggtttacatacatgtctatcggtttttgaattttga 20583  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | ||||  ||||||||||||||||||| |||| ||||    
T  20582 ataagacgtaatctctatttcttgaataaatgtattattcg 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 488 - 585
Target Start/End: Original strand, 12200 - 12297
Alignment:
Q  488 ttactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa-ttttgaatgtggcgtagcctctatttcttgaataa 585  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  |||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  12200 ttactctggtttatattccgctgcgactgttgaggtttatatacatgattatt-gtttttgaatttttgaatgcggcgtagcctctatttcttgaataa 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 479 - 597
Target Start/End: Complemental strand, 41812 - 41695
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||||| ||||| |||||||||||    
T  41812 atattttgatcactctgatttatattccgctgtaactgttgaggtttatatacatgtctatccg-ttttgaattttgaatgtagcgtaacctctatttct 41714  T
Q  579 tgaataaatatattcttcg 597  Q
    |||||| || |||| ||||    
T  41713 tgaatatatgtattattcg 41695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1148 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold1148
Description:

Target: scaffold1148; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 125 - 238
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  125 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 224  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  225 aaatgtattattcg 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 16099 - 16212
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  16099 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 16198  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  16199 aaatgtattattcg 16212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 33121 - 33008
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  33121 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 33022  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  33021 aaatgtattattcg 33008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 29358 - 29245
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  29358 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 29259  T
Q  584 aaatatattcttcg 597  Q
    ||||||||| ||||    
T  29258 aaatatattattcg 29245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 458 - 597
Target Start/End: Complemental strand, 8809 - 8669
Alignment:
Q  458 atttatttcttcataacatgtatatgtt-gattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttga 556  Q
    ||||||||  |||| |||||||||| || ||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  8809 atttatttgctcatgacatgtatatatttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttga 8710  T
Q  557 atgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||  | | ||  ||||||||||||||||||| |||| ||||    
T  8709 ataagacataatctctatttcttgaataaatgtattattcg 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 7180 - 7048
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatttt-gaatg-tggcg 564  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| | ||| |||      
T  7180 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaagtttatatacatgtttattggtttttaaatttttgtatgatggaa 7081  T
Q  565 tagcctctatttcttgaataaatatattcttcg 597  Q
    || |||||||||||||||||||| |||| ||||    
T  7080 taacctctatttcttgaataaatgtattattcg 7048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 14002 - 14131
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaa-ttttgaatgtggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| ||| |||| |||||||||||||| ||||||  |||||| ||||||||||| |||    
T  14002 ttcatgacatgtatatttggattactctggtttatattccgctgcgactattgaagtttatatacatgtttattgg--tttgaatttttgaatgtgacgt 14099  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    || |||||||||| |||||||| |||| ||||    
T  14100 agtctctatttctcgaataaatgtattattcg 14131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 37284 - 37184
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||     ||| |||||||||||||||||||| |||| |||    
T  37284 tttatattccgctgtaactgttgaggtttacatacatgtctattggtttttgaattttgaataatatgtaacctctatttcttgaataaatgtattattc 37185  T
Q  597 g 597  Q
    |    
T  37184 g 37184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 554
Target Start/End: Original strand, 198235 - 198322
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaatttt 554  Q
    ||||| |||||||||| | ||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  198235 ttcatgacatgtatatttggattactatggtttatattccgctgcgactgttgaggtttatatacatgtttattggtttttgaatttt 198322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 331362 - 331416
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| |||| ||||    
T  331362 ttttgaattttggatgatgacgtagcctctatttcttgaataaatgtattattcg 331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 592
Target Start/End: Original strand, 1564 - 1689
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||||| | ||| ||||  ||||| | ||| ||||||    
T  1564 ttcatgacatgtatatttggattactctggtttatattccgctgcgactgttgaagtttatatacatgt-ttttgattttgaaatttggtatgatggcgt 1662  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    |||||||||||||||||||||| ||||    
T  1663 agcctctatttcttgaataaatgtatt 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 3726 - 3839
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  | | ||  |||||||||||||||    
T  3726 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttgaataagacataatctctatttcttgaat 3825  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  3826 aaatgtattattcg 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 4988 - 5119
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||| ||||  | ||   |||||||||||||||| || |||    
T  4988 ttcatgacatgtatattttgagtactctggtttatattccgctgcgactgttgaggattatatgcatgcatgtttagttttgaattttgaatgatgacgt 5087  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  5088 agcatctatttcttgaataaatgtattattcg 5119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 5582 - 5452
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| ||||||| |||||||| |||||||| |||||||||||||| || |||||||  | |||||  || ||||||    
T  5582 ttcatgacatgtatatttggattactctggtttatactccgctgcgactgttgaagtttatatacatgttta-tggttttgaatttttgtctgatggcgt 5484  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  5483 agcctctatttcttgaataaatgtattgttcg 5452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 479 - 597
Target Start/End: Complemental strand, 2307 - 2190
Alignment:
Q  479 atatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttct 578  Q
    |||| ||||| |||||  |||||||||||||| ||||||| ||||||||||||||||||||  | ||||||||||||||||| |||||  ||||||||||    
T  2307 atattttgatcactctgatttatattccgctgtaactgttaaggtttatatacatgtctatccg-ttttgaattttgaatgtagcgtaatctctatttct 2209  T
Q  579 tgaataaatatattcttcg 597  Q
    |||||| || |||| ||||    
T  2208 tgaatatatgtattattcg 2190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 34543 - 34430
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||||| || ||||||| ||||||| |||||||||||| ||||||||||||||||||  | ||||  |||||||||||||||    
T  34543 ttgatcactctgatttatattccgttgtaactgtttaggtttacatacatgtctatcggtttttgaattttgaataagacgtaatctctatttcttgaat 34444  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  34443 aaatgtattattcg 34430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 473 - 587
Target Start/End: Complemental strand, 4163 - 4048
Alignment:
Q  473 acatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaat-tttgaatg-tggcgtagcct 570  Q
    |||||||||| |||| |||||| |||||||||| ||| | ||||||||||||||||||||||| |||||||||| |||| |||| ||| || | ||||||    
T  4163 acatgtatatcttgagtactctggtttatattctgctacgactgttgaggtttatatacatgtttattggtttt-gaatctttgtatgatgacatagcct 4065  T
Q  571 ctatttcttgaataaat 587  Q
    |||||||||||||||||    
T  4064 ctatttcttgaataaat 4048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 597
Target Start/End: Original strand, 7544 - 7674
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | ||||||||| ||||||||| || ||| |||||||| |||||||||||||| || |||||||  | ||||| ||| || |||    
T  7544 ttcatgacatgtatatttggattactctggtttatatttcgatgcgactgttgacgtttatatacatgttta-tggttttgaatttttgtatgatgacgt 7642  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||| |||| ||||    
T  7643 agcctctatttcttgaataaatgtattattcg 7674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 31511 - 31380
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| |||| ||||||  ||||||||||||||| |||||||||| |||||| ||||  | |||  ||||||| |||||||| || |||    
T  31511 ttcatgacatgtatattttgaatactctgatttatattccgctgcgactgttgaggattatatgcatgcatgttgagttttgaaatttgaatgttgacgt 31412  T
Q  566 agcctctatttcttgaataaatatattcttcg 597  Q
    ||| |||||||||||||||||| |||| ||||    
T  31411 agcatctatttcttgaataaatgtattattcg 31380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 467 - 597
Target Start/End: Complemental strand, 13723 - 13590
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatat--tccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggc 563  Q
    ||||| ||||||||||||||| |||||| ||||||||  || ||||| |||||||| |||||||| ||||  | ||||||||  ||||||| ||| || |    
T  13723 ttcatgacatgtatatgttgagtactctggtttatatattctgctgcgactgttgaagtttatatgcatgcatgttggttttgaaattttggatgatgac 13624  T
Q  564 gtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||| |||| ||||    
T  13623 gtagcctctatttcttgaataaatgtattattcg 13590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 67578 - 67691
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||||||||| |||| |||||||||| |||| |||||||||||| ||||||||||||||||||  | ||||   ||||||||||||||    
T  67578 ttgatcactctgatttatattcagctgtaactgttgagatttacatacatgtctatcggtttttgaattttgaataagacgtaatgtctatttcttgaat 67677  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  67678 aaatgtattattcg 67691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 87165 - 87052
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  |||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| |||    | ||  |||||||||||||||    
T  87165 ttgatcactctgatttatattccgctgtaactgttgaggtttacatacatgtctatcggtttttgaattttaaataaaacataaactctatttcttgaat 87066  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  87065 aaatgtattattcg 87052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 597
Target Start/End: Complemental strand, 2643 - 2535
Alignment:
Q  489 tactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaata 588  Q
    |||||| |||||||||||||||| ||||||||| ||||||| ||||  | ||   ||| |||||||||||||| |||||| ||||||||||||||||||     
T  2643 tactctggtttatattccgctgcgactgttgagatttatatgcatgcatgttatgtttggaattttgaatgtgacgtagcatctatttcttgaataaatg 2544  T
Q  589 tattcttcg 597  Q
    |||| ||||    
T  2543 tattattcg 2535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 513 - 597
Target Start/End: Complemental strand, 24343 - 24259
Alignment:
Q  513 actgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || ||||  || |||||||| ||||||| |||| ||||    
T  24343 actgttgaggtttatatacatgtctatcggtttttgaattttgaatatgacgtaatctttatttctttaataaatgtattattcg 24259  T

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Target: scaffold0115 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 497 - 597
Target Start/End: Complemental strand, 797 - 697
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttc 596  Q
    |||||||||||||| |||||||||| |||| |||| ||||||| ||||||||||||||||||    ||||  ||||||||||||||||||| |||| |||    
T  797 tttatattccgctgtaactgttgagatttacatacttgtctatcggtttttgaattttgaataatacgtaatctctatttcttgaataaatgtattattc 698  T
Q  597 g 597  Q
    |    
T  697 g 697  T

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Target: scaffold2007 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 1 - 54
Alignment:
Q  544 ttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  1 ttttgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 54  T

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Target: scaffold0673 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 540
Target Start/End: Original strand, 4272 - 4345
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctatt 540  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||  ||||||||| ||||||||||||| ||||    
T  4272 ttcatgacatgtatatgttgagtactcttgtttatattccgctgtgactgttgagatttatatacatgtttatt 4345  T

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Target: scaffold0010 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 139272 - 139384
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| |||||||||| |||| |||||||||||| || |||||||||||||||  | ||||  |||||||||||||||    
T  139272 ttgatcactctgatttgtattccgctgtaactgttgagatttacatacatgtctatcgg-ttttgaattttgaataagacgtaatctctatttcttgaat 139370  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  139371 aaatgtattattcg 139384  T

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Target: scaffold1124 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 590
Target Start/End: Original strand, 1500 - 1591
Alignment:
Q  498 ttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatata 590  Q
    ||||||||| ||| |||||||||| |||| |||||||||||| || |||||||||||||||  | ||||  ||||||||||||||||||||||    
T  1500 ttatattccactgtaactgttgagatttacatacatgtctatcgg-ttttgaattttgaataagacgtaatctctatttcttgaataaatata 1591  T

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Target: scaffold0316 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 580
Target Start/End: Complemental strand, 20066 - 19974
Alignment:
Q  489 tactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttg 580  Q
    |||||| |||||||||||| ||| | ||||||| ||||||||||||| ||||||||||  | ||||||||| || ||||||||||||||||||    
T  20066 tactctggtttatattccgttgcgattgttgagatttatatacatgtttattggttttgaatttttgaatgatgacgtagcctctatttcttg 19974  T

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Target: scaffold0031 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 475 - 597
Target Start/End: Complemental strand, 30054 - 29932
Alignment:
Q  475 atgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctcta 573  Q
    |||||||| | ||||||| | ||||||||||| || | ||||||||| ||||||| ||||  |||||| |||||||||||| ||| || |||||| ||||    
T  30054 atgtatatttggattactgtggtttatattcctctacgactgttgagatttatatgcatgcttattgg-ttttgaattttgtatgatgacgtagcatcta 29956  T
Q  574 tttcttgaataaatatattcttcg 597  Q
    |||||||||||||| |||| ||||    
T  29955 tttcttgaataaatgtattattcg 29932  T

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Target: scaffold0031; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 587
Target Start/End: Complemental strand, 68312 - 68215
Alignment:
Q  490 actctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaat 587  Q
    ||||| |||||||||||||||| |||||||| |||||||| | ||  |||||| |||||||||||| ||| || |||||| ||||||||||||||||||    
T  68312 actctggtttatattccgctgcgactgttgaagtttatatgcttgcatattgg-ttttgaattttgtatgatgacgtagcatctatttcttgaataaat 68215  T

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Target: scaffold0002 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 546 - 597
Target Start/End: Original strand, 391325 - 391376
Alignment:
Q  546 ttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  391325 ttgaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 391376  T

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Target: scaffold0175 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 548 - 597
Target Start/End: Original strand, 13057 - 13106
Alignment:
Q  548 gaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  13057 gaattttgaatgtggcgtagcctctatttcttgaataaatgtattattcg 13106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 12952 - 12835
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtcta----ttggtttttgaattttgaatgtggcgtagcctctatttctt 579  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||| |||||||||||    ||  ||||||||||||||||  | ||||  |||||||||||    
T  12952 ttgatcactctgatttgtattccgctgtaactgttgaggtttacatacatgtctatcgttttttttttgaattttgaataagacgtaatctctatttctt 12853  T
Q  580 gaataaatatattcttcg 597  Q
    |||||||| |||| ||||    
T  12852 gaataaatgtattattcg 12835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 25416 - 25529
Alignment:
Q  484 ttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaat 583  Q
    ||||| |||||  ||| |||||||||| ||||||||||  ||| |||||| ||||| ||||||| ||||||||||  | ||||  |||||||||||||||    
T  25416 ttgatcactctgatttgtattccgctgtaactgttgagaattaaatacatatctatcggtttttaaattttgaataagacgtaatctctatttcttgaat 25515  T
Q  584 aaatatattcttcg 597  Q
    |||| |||| ||||    
T  25516 aaatgtattattcg 25529  T

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Target: scaffold0342 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 496 - 597
Target Start/End: Complemental strand, 3790 - 3690
Alignment:
Q  496 gtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattct 594  Q
    |||||||||||||||| |||||||| || ||||||||||| |||  | |||||||||||| ||| || |||| | |||||||||||||||||| |||| |    
T  3790 gtttatattccgctgcgactgttgaagtctatatacatgtttat--ggttttgaattttgtatgatgacgtaacatctatttcttgaataaatgtattat 3693  T
Q  595 tcg 597  Q
    |||    
T  3692 tcg 3690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 497 - 597
Target Start/End: Original strand, 15548 - 15650
Alignment:
Q  497 tttatattccgctgcaactgttgaggtttatatacatgtctattggttt--ttgaattttgaatgtggcgtagcctctatttcttgaataaatatattct 594  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||  ||  |||||||||  | ||||  ||||||||||||||||||| |||| |    
T  15548 tttatattccgctgtaactgttgaggtttacatacatgtctatcgtttttattttattttgaataagacgtaatctctatttcttgaataaatgtattat 15647  T
Q  595 tcg 597  Q
    |||    
T  15648 tcg 15650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 501 - 597
Target Start/End: Original strand, 24946 - 25044
Alignment:
Q  501 tattccgctgcaactgttgaggtttatatacatgtctattggttt--ttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||| ||||||||||||||| |||||||||||| | |||  ||  |||||||||  | ||||  ||||||||||||||||||| |||| ||||    
T  24946 tattccgctgtaactgttgaggtttacatacatgtctatcgtttttattttattttgaataagacgtaatctctatttcttgaataaatgtattattcg 25044  T

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Target: scaffold0292 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 4)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 544 - 597
Target Start/End: Complemental strand, 8932 - 8878
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  8932 ttttgaattttgaatgatggcgtagcctctatttcttgaataaatgtattattcg 8878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 544 - 597
Target Start/End: Complemental strand, 17381 - 17327
Alignment:
Q  544 ttttgaattttgaatg-tggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  17381 ttttgaattttgaatgatggcgtagcctctatttcttgaataaatgtattattcg 17327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 521
Target Start/End: Complemental strand, 9011 - 8964
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||||||| | ||||||||| |||||||||||||||| |||||||||    
T  9011 catgtatatttggattactctggtttatattccgctgcgactgttgag 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 521
Target Start/End: Complemental strand, 17460 - 17413
Alignment:
Q  474 catgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||||||| | ||||||||| |||||||||||||||| |||||||||    
T  17460 catgtatatttggattactctggtttatattccgctgcgactgttgag 17413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 597
Target Start/End: Complemental strand, 12169 - 12094
Alignment:
Q  522 gtttatatacatgtctattggtttttgaattttgaatgtggcgtagcctctatttcttgaataaatatattcttcg 597  Q
    ||||| |||||||||||| ||||||||||||||||||  | ||||  | ||||||||||||||||| |||| ||||    
T  12169 gtttacatacatgtctatcggtttttgaattttgaataagacgtaatcactatttcttgaataaatgtattattcg 12094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 592
Target Start/End: Original strand, 16699 - 16824
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgaggtttatatacatgtctattggtttttgaattttgaatg-tggcgt 565  Q
    ||||| |||||||||| | || |||||| |||||||| ||| ||| ||| ||||| ||||||| ||||  | |||  |||||||||||||||  || |||    
T  16699 ttcatgacatgtatatttggagtactctggtttatat-ccgatgcgactattgagatttatatgcatgcatgttgagttttgaattttgaataatgacgt 16797  T
Q  566 agcctctatttcttgaataaatatatt 592  Q
    ||| ||||||||||||||||| |||||    
T  16798 agcatctatttcttgaataaacatatt 16824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 55920 - 55866
Alignment:
Q  467 ttcataacatgtatatgttgattactctagtttatattccgctgcaactgttgag 521  Q
    ||||| |||||||||| | || |||||| |||||||||||||||| |||||||||    
T  55920 ttcatgacatgtatatttcgagtactctggtttatattccgctgcgactgttgag 55866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 535
Target Start/End: Complemental strand, 8102 - 8058
Alignment:
Q  491 ctctagtttatattccgctgcaactgttgaggtttatatacatgt 535  Q
    |||| |||||||||||| ||| |||||||| ||||||||||||||    
T  8102 ctctggtttatattccgttgcgactgttgaagtttatatacatgt 8058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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