View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21407_high_6 (Length: 220)
Name: NF21407_high_6
Description: NF21407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21407_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 33585637 - 33585819
Alignment:
| Q |
20 |
taagggaggacccccaaaattagcatgtgaataaaaatatagtaagaaaacgaaagccaatatataagagatgtttccaatcattgaatcgtttgggtcc |
119 |
Q |
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| T |
33585637 |
taagggaggacccccaaaattagcatgtgaataaaaatatagtaagaaaacgaaagccaatatataagagatgtttccaatcatggaatcgtttgggtcc |
33585736 |
T |
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| Q |
120 |
ttgtatatatgtactgtaacaatcggtgtttgcaacttgtaagctcaatgtcaactatcttctatttaactagtttgggtcctatgc |
206 |
Q |
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| T |
33585737 |
ttg----tatgtactgtaacaatcggtgtttgcaacttgtaagctcaatgtcaactatcttctatttaactagtttgggtcctatgc |
33585819 |
T |
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