View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21408_low_19 (Length: 329)

Name: NF21408_low_19
Description: NF21408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21408_low_19
NF21408_low_19
[»] chr1 (40 HSPs)
chr1 (1-246)||(33557-33802)
chr1 (1-251)||(20061936-20062186)
chr1 (1-246)||(33619034-33619279)
chr1 (1-246)||(28031647-28031892)
chr1 (1-246)||(50096133-50096378)
chr1 (1-246)||(50624766-50625011)
chr1 (3-238)||(39288294-39288530)
chr1 (1-175)||(14602080-14602255)
chr1 (1-246)||(26244549-26244794)
chr1 (1-176)||(42154819-42154995)
chr1 (1-176)||(43191794-43191970)
chr1 (1-175)||(47829032-47829207)
chr1 (1-176)||(10913843-10914019)
chr1 (1-246)||(12322092-12322337)
chr1 (1-176)||(37172386-37172562)
chr1 (78-251)||(18963604-18963777)
chr1 (77-246)||(50096347-50096516)
chr1 (77-251)||(20061793-20061967)
chr1 (77-246)||(28031861-28032030)
chr1 (4-144)||(29584495-29584635)
chr1 (76-246)||(42154963-42155132)
chr1 (108-246)||(50625011-50625147)
chr1 (87-246)||(39288152-39288313)
chr1 (77-176)||(10913988-10914088)
chr1 (99-174)||(51999546-51999622)
chr1 (87-246)||(43191656-43191815)
chr1 (77-175)||(47829176-47829275)
chr1 (1-161)||(7337075-7337236)
chr1 (76-175)||(14602223-14602323)
chr1 (77-251)||(37172243-37172417)
chr1 (108-176)||(33802-33871)
chr1 (77-246)||(26244763-26244932)
chr1 (121-246)||(39027481-39027606)
chr1 (77-168)||(33618973-33619065)
chr1 (108-246)||(12322337-12322477)
chr1 (64-104)||(52490079-52490119)
chr1 (28-104)||(11200353-11200429)
chr1 (200-246)||(14602345-14602391)
chr1 (22-104)||(44561679-44561760)
chr1 (196-245)||(47829293-47829342)
[»] chr6 (35 HSPs)
chr6 (1-246)||(30609004-30609249)
chr6 (1-246)||(8936444-8936689)
chr6 (1-246)||(5923826-5924072)
chr6 (1-246)||(8926187-8926432)
chr6 (1-251)||(31717170-31717420)
chr6 (6-176)||(29819455-29819626)
chr6 (1-251)||(19661487-19661737)
chr6 (1-246)||(3345158-3345402)
chr6 (1-165)||(17238114-17238279)
chr6 (1-176)||(33783535-33783711)
chr6 (10-176)||(3484853-3485020)
chr6 (1-223)||(28853507-28853730)
chr6 (1-176)||(16525262-16525438)
chr6 (1-144)||(5404672-5404815)
chr6 (77-251)||(17238248-17238422)
chr6 (108-245)||(5924072-5924210)
chr6 (1-130)||(4601071-4601198)
chr6 (77-246)||(19661350-19661518)
chr6 (77-246)||(30608866-30609035)
chr6 (108-246)||(3485019-3485157)
chr6 (77-246)||(26272194-26272363)
chr6 (108-251)||(5404815-5404958)
chr6 (77-246)||(3345020-3345189)
chr6 (108-238)||(28853730-28853860)
chr6 (77-246)||(8926401-8926572)
chr6 (77-246)||(8936658-8936829)
chr6 (1-53)||(18502736-18502788)
chr6 (1-53)||(26272173-26272225)
chr6 (77-176)||(31717389-31717489)
chr6 (77-246)||(16525407-16525576)
chr6 (86-246)||(33783396-33783557)
chr6 (94-246)||(9571627-9571779)
chr6 (108-162)||(29819631-29819686)
chr6 (185-251)||(5409217-5409283)
chr6 (185-249)||(5140687-5140751)
[»] chr4 (48 HSPs)
chr4 (1-246)||(22487220-22487465)
chr4 (1-246)||(11021673-11021918)
chr4 (1-251)||(989213-989463)
chr4 (6-246)||(5720953-5721192)
chr4 (1-176)||(46480986-46481162)
chr4 (1-176)||(17107501-17107677)
chr4 (1-176)||(17865045-17865221)
chr4 (1-246)||(13683004-13683249)
chr4 (5-246)||(43749947-43750188)
chr4 (1-176)||(37815410-37815586)
chr4 (1-246)||(16959902-16960147)
chr4 (1-235)||(2184532-2184767)
chr4 (1-246)||(4712179-4712423)
chr4 (1-174)||(12792710-12792884)
chr4 (1-246)||(39385299-39385545)
chr4 (22-251)||(46081533-46081762)
chr4 (1-251)||(26314613-26314863)
chr4 (1-176)||(16491716-16491892)
chr4 (1-176)||(13493022-13493198)
chr4 (4-176)||(9301711-9301883)
chr4 (1-176)||(32592881-32593054)
chr4 (1-162)||(20045885-20046047)
chr4 (77-246)||(37815555-37815725)
chr4 (77-246)||(4712392-4712560)
chr4 (77-250)||(32592739-32592912)
chr4 (1-130)||(1106425-1106554)
chr4 (77-246)||(16959763-16959933)
chr4 (77-246)||(17865190-17865359)
chr4 (110-246)||(26314476-26314611)
chr4 (77-174)||(43750161-43750259)
chr4 (77-159)||(13683218-13683301)
chr4 (108-246)||(13492884-13493022)
chr4 (77-162)||(46481131-46481217)
chr4 (77-246)||(17107646-17107814)
chr4 (77-246)||(22487434-22487601)
chr4 (108-176)||(2184464-2184532)
chr4 (87-174)||(9301641-9301729)
chr4 (77-176)||(11021887-11021987)
chr4 (108-162)||(16491892-16491947)
chr4 (108-162)||(5721197-5721253)
chr4 (26-161)||(38050907-38051043)
chr4 (108-174)||(12792643-12792710)
chr4 (91-144)||(6100534-6100587)
chr4 (108-160)||(20046047-20046100)
chr4 (27-130)||(28306867-28306970)
chr4 (77-161)||(989160-989244)
chr4 (32-101)||(7973738-7973807)
chr4 (185-242)||(13683319-13683376)
[»] chr8 (43 HSPs)
chr8 (1-222)||(24332285-24332507)
chr8 (1-246)||(31403051-31403296)
chr8 (1-246)||(13154239-13154484)
chr8 (1-246)||(6943657-6943902)
chr8 (1-246)||(9180045-9180290)
chr8 (6-176)||(31685739-31685910)
chr8 (1-175)||(18764423-18764598)
chr8 (1-174)||(6891849-6892023)
chr8 (1-144)||(3272822-3272965)
chr8 (22-235)||(26479453-26479666)
chr8 (1-246)||(31186374-31186618)
chr8 (1-161)||(13405532-13405693)
chr8 (1-176)||(220581-220757)
chr8 (1-176)||(689736-689912)
chr8 (1-176)||(734204-734380)
chr8 (1-176)||(858100-858276)
chr8 (22-246)||(2835125-2835349)
chr8 (4-152)||(37586159-37586307)
chr8 (5-162)||(27993419-27993577)
chr8 (5-162)||(28050721-28050879)
chr8 (4-128)||(20112533-20112658)
chr8 (87-246)||(3272944-3273103)
chr8 (77-246)||(31402912-31403082)
chr8 (77-246)||(18764285-18764454)
chr8 (77-245)||(13405662-13405830)
chr8 (111-246)||(26479326-26479460)
chr8 (77-246)||(6943871-6944040)
chr8 (78-251)||(9180260-9180433)
chr8 (4-97)||(36449108-36449201)
chr8 (77-160)||(24332476-24332560)
chr8 (111-246)||(2835342-2835476)
chr8 (77-246)||(13154453-13154622)
chr8 (108-176)||(31685916-31685985)
chr8 (77-176)||(31186587-31186687)
chr8 (24-144)||(32399152-32399269)
chr8 (95-144)||(37586120-37586169)
chr8 (1-114)||(37856350-37856463)
chr8 (27-137)||(31748400-31748508)
chr8 (108-144)||(6892023-6892059)
chr8 (1-104)||(2679117-2679220)
chr8 (198-245)||(31186679-31186726)
chr8 (25-144)||(45151540-45151656)
chr8 (26-82)||(6834580-6834636)
[»] chr7 (42 HSPs)
chr7 (1-246)||(42516867-42517112)
chr7 (1-246)||(34487142-34487387)
chr7 (1-176)||(24494-24670)
chr7 (1-246)||(34595457-34595702)
chr7 (1-246)||(44219432-44219677)
chr7 (1-176)||(19157762-19157938)
chr7 (1-176)||(20757161-20757337)
chr7 (1-176)||(31579569-31579745)
chr7 (1-175)||(40729133-40729308)
chr7 (1-230)||(13426431-13426659)
chr7 (1-176)||(22364791-22364965)
chr7 (1-175)||(35026514-35026689)
chr7 (1-235)||(44483240-44483471)
chr7 (1-175)||(19476465-19476639)
chr7 (1-176)||(22954478-22954645)
chr7 (1-149)||(23177144-23177292)
chr7 (249-312)||(23620067-23620130)
chr7 (77-248)||(42517081-42517252)
chr7 (77-249)||(44219291-44219463)
chr7 (86-246)||(44483449-44483609)
chr7 (77-251)||(35026658-35026831)
chr7 (108-252)||(19157938-19158082)
chr7 (108-252)||(20757337-20757481)
chr7 (77-246)||(22364657-22364822)
chr7 (77-246)||(24356-24525)
chr7 (87-174)||(34487366-34487454)
chr7 (77-175)||(19476608-19476707)
chr7 (77-175)||(22954410-22954509)
chr7 (108-246)||(40729308-40729446)
chr7 (108-175)||(829926-829994)
chr7 (108-175)||(1195106-1195174)
chr7 (1-104)||(23190503-23190607)
chr7 (266-309)||(23567209-23567252)
chr7 (77-176)||(31579500-31579600)
chr7 (108-174)||(34595390-34595457)
chr7 (262-312)||(23607773-23607823)
chr7 (258-312)||(23625933-23625987)
chr7 (185-246)||(13426325-13426386)
chr7 (264-309)||(23573861-23573906)
chr7 (265-309)||(23590846-23590890)
chr7 (265-309)||(23601577-23601621)
chr7 (265-311)||(23615157-23615203)
[»] chr3 (39 HSPs)
chr3 (1-246)||(52835545-52835790)
chr3 (1-251)||(27934446-27934696)
chr3 (1-246)||(49499843-49500088)
chr3 (1-246)||(50645472-50645717)
chr3 (1-245)||(38807539-38807783)
chr3 (1-246)||(29838432-29838677)
chr3 (2-246)||(32315515-32315758)
chr3 (1-251)||(26582750-26583000)
chr3 (7-230)||(16056365-16056587)
chr3 (1-246)||(33162458-33162703)
chr3 (1-162)||(42093533-42093695)
chr3 (1-246)||(27284970-27285214)
chr3 (1-246)||(46962720-46962965)
chr3 (1-175)||(14545974-14546149)
chr3 (1-246)||(49121715-49121961)
chr3 (1-162)||(55092290-55092452)
chr3 (1-176)||(7029454-7029630)
chr3 (1-245)||(17109989-17110233)
chr3 (77-246)||(17109851-17110020)
chr3 (77-176)||(21323101-21323202)
chr3 (108-249)||(29838291-29838432)
chr3 (77-251)||(50645686-50645860)
chr3 (86-176)||(42093464-42093555)
chr3 (108-251)||(49500088-49500231)
chr3 (77-161)||(889212-889297)
chr3 (109-246)||(32315376-32315513)
chr3 (108-252)||(46962576-46962720)
chr3 (108-246)||(14545835-14545974)
chr3 (77-174)||(52835759-52835857)
chr3 (1-52)||(889266-889317)
chr3 (77-176)||(33162389-33162489)
chr3 (87-242)||(26582617-26582771)
chr3 (77-175)||(27285183-27285282)
chr3 (108-251)||(27934696-27934839)
chr3 (108-246)||(55092452-55092590)
chr3 (1-61)||(39062635-39062695)
chr3 (77-246)||(38807752-38807921)
chr3 (64-136)||(44937793-44937865)
chr3 (108-144)||(16056593-16056629)
[»] scaffold0167 (2 HSPs)
scaffold0167 (1-246)||(4525-4770)
scaffold0167 (77-133)||(4500-4556)
[»] chr5 (39 HSPs)
chr5 (1-251)||(10461483-10461733)
chr5 (1-176)||(24490981-24491157)
chr5 (1-251)||(5933263-5933513)
chr5 (4-246)||(22394265-22394507)
chr5 (1-176)||(14868742-14868918)
chr5 (1-245)||(18786119-18786362)
chr5 (4-174)||(6497263-6497434)
chr5 (1-246)||(3598413-3598658)
chr5 (1-223)||(15969453-15969675)
chr5 (1-175)||(6542397-6542572)
chr5 (1-162)||(29991185-29991347)
chr5 (1-176)||(41137210-41137386)
chr5 (1-176)||(4122715-4122891)
chr5 (1-174)||(43197039-43197213)
chr5 (1-161)||(7133209-7133370)
chr5 (24-174)||(40588811-40588961)
chr5 (3-130)||(16416005-16416132)
chr5 (91-174)||(40589481-40589564)
chr5 (77-246)||(7133339-7133511)
chr5 (1-100)||(7586179-7586278)
chr5 (108-246)||(3598658-3598796)
chr5 (77-246)||(22394124-22394293)
chr5 (77-245)||(14868887-14869054)
chr5 (86-246)||(24490844-24491003)
chr5 (77-174)||(5933196-5933294)
chr5 (1-75)||(25329235-25329309)
chr5 (77-246)||(4122579-4122746)
chr5 (77-246)||(6497406-6497575)
chr5 (77-176)||(18786050-18786150)
chr5 (108-174)||(10461416-10461483)
chr5 (108-245)||(25329098-25329235)
chr5 (86-174)||(29991325-29991414)
chr5 (77-174)||(15969644-15969742)
chr5 (108-246)||(43196901-43197039)
chr5 (108-251)||(6542254-6542397)
chr5 (64-104)||(24640648-24640688)
chr5 (38-113)||(38680505-38680580)
chr5 (108-140)||(41137386-41137418)
chr5 (198-246)||(5933125-5933173)
[»] chr2 (55 HSPs)
chr2 (1-245)||(7877462-7877707)
chr2 (1-246)||(29683176-29683419)
chr2 (1-246)||(14379251-14379496)
chr2 (4-176)||(17457859-17458032)
chr2 (1-246)||(41594089-41594334)
chr2 (2-246)||(19204592-19204836)
chr2 (1-175)||(12806619-12806794)
chr2 (1-235)||(28921205-28921438)
chr2 (1-176)||(3371371-3371547)
chr2 (1-251)||(13572467-13572716)
chr2 (1-224)||(18369151-18369373)
chr2 (4-173)||(4171597-4171767)
chr2 (4-246)||(6880114-6880356)
chr2 (1-251)||(30432733-30432983)
chr2 (1-246)||(2395157-2395402)
chr2 (1-144)||(42705054-42705197)
chr2 (8-246)||(38873474-38873710)
chr2 (1-176)||(6164036-6164212)
chr2 (1-222)||(32521498-32521720)
chr2 (1-161)||(10748632-10748793)
chr2 (1-176)||(3948502-3948678)
chr2 (1-246)||(37609094-37609338)
chr2 (8-176)||(33940822-33940991)
chr2 (68-162)||(30771151-30771246)
chr2 (87-174)||(25318518-25318606)
chr2 (77-251)||(7877318-7877493)
chr2 (77-256)||(18369003-18369182)
chr2 (77-256)||(28921407-28921586)
chr2 (77-249)||(3948361-3948533)
chr2 (108-246)||(29683419-29683557)
chr2 (77-245)||(4171739-4171907)
chr2 (87-251)||(12806773-12806937)
chr2 (77-246)||(10748494-10748663)
chr2 (77-176)||(6880042-6880142)
chr2 (77-249)||(42705166-42705338)
chr2 (88-174)||(6163969-6164056)
chr2 (77-246)||(2395371-2395540)
chr2 (87-245)||(14379114-14379272)
chr2 (77-246)||(17457718-17457887)
chr2 (77-246)||(30432596-30432764)
chr2 (108-175)||(3371547-3371615)
chr2 (109-251)||(19204838-19204981)
chr2 (77-162)||(37609039-37609125)
chr2 (108-245)||(41593952-41594089)
chr2 (1-53)||(25318454-25318506)
chr2 (108-246)||(33940681-33940819)
chr2 (94-175)||(32521706-32521788)
chr2 (77-176)||(25318385-25318485)
chr2 (4-98)||(31420769-31420863)
chr2 (77-245)||(13572685-13572853)
chr2 (24-60)||(29417654-29417690)
chr2 (8-115)||(7834209-7834315)
chr2 (68-144)||(11295642-11295721)
chr2 (76-149)||(35510901-35510974)
chr2 (68-128)||(4726010-4726070)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-246)||(212550-212795)
scaffold0006 (77-246)||(212412-212581)
[»] scaffold0126 (2 HSPs)
scaffold0126 (1-251)||(36132-36381)
scaffold0126 (108-176)||(36063-36132)
[»] scaffold0817 (2 HSPs)
scaffold0817 (1-251)||(3978-4227)
scaffold0817 (108-246)||(4227-4365)
[»] scaffold0103 (2 HSPs)
scaffold0103 (1-176)||(43415-43592)
scaffold0103 (77-251)||(43272-43446)
[»] scaffold0137 (2 HSPs)
scaffold0137 (1-144)||(36903-37046)
scaffold0137 (77-246)||(36767-36934)
[»] scaffold0170 (2 HSPs)
scaffold0170 (1-175)||(8680-8855)
scaffold0170 (108-176)||(8611-8680)
[»] scaffold0147 (3 HSPs)
scaffold0147 (1-256)||(25113-25356)
scaffold0147 (108-176)||(25356-25425)
scaffold0147 (198-246)||(25471-25519)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-155)||(74005-74159)
scaffold0028 (86-176)||(74137-74228)
[»] scaffold0021 (2 HSPs)
scaffold0021 (15-176)||(118098-118258)
scaffold0021 (108-176)||(118277-118346)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-107)||(11209-11315)
[»] scaffold0062 (2 HSPs)
scaffold0062 (64-125)||(11299-11360)
scaffold0062 (27-126)||(10808-10906)
[»] scaffold0045 (2 HSPs)
scaffold0045 (185-246)||(43910-43971)
scaffold0045 (198-248)||(44003-44053)


Alignment Details
Target: chr1 (Bit Score: 151; Significance: 7e-80; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 33802 - 33557
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  33802 ttgattcatattggattttgtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccattttcaata 33703  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |        |||||||||| | ||    
T  33702 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagagactaaaa-ctagaaaaatatttttatagggac 33604  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||||| |||||||| ||||  || |||| |||||||    
T  33603 taaaaccaaaacgtcagatatttgcagggatcatgttcatatttaag 33557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 20061936 - 20062186
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  20061936 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgatgactaaaatgaatattatagggaccaatttcaata 20062035  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  20062036 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-caaaaaatatttttatagggac 20062134  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||||| || |||||||| ||||| |||| || ||||||| ||||    
T  20062135 taaaaccaaaacgccagatatttgcagggaccatttccatatttaagccttt 20062186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33619034 - 33619279
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  33619034 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatctcaata 33619133  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
     |||||||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||        |||||||||| ||||    
T  33619134 agaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgtagggactaaaacc-aaaaaaatatttttataggaac 33619232  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||  || |||||||| ||||| |||| || |||||||    
T  33619233 taaaaccaaaacaccagatatttgcagggaccatttccatatttaag 33619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28031892 - 28031647
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||    
T  28031892 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccttcaaaatgaggactaaaatgaatattataaggaccaatttcaata 28031793  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||||| || ||||||||||        || ||||||||| ||    
T  28031792 tgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattatatatttgcagggactaaaacc-aaaaaaataattttataaggac 28031694  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||| |||||| || |||||||| ||||| |||| || |||||||    
T  28031693 taaaactaaaacgccagatatttgcagggaccatttccatatttaag 28031647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 50096378 - 50096133
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  50096378 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 50096279  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    | ||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| || ||||||||||        |||||||| | | ||    
T  50096278 taaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttacagggac 50096180  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| |||| |||||||| ||||| |||| || |||||||    
T  50096179 taaaaccaaaatgtcagatatttgcagggacaatttccatatttaag 50096133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 50625011 - 50624766
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  50625011 ttgattcatattggattcggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattacagggaccaatttcaata 50624912  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        ||| | |||||| ||    
T  50624911 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatatatataaggac 50624813  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||| ||| || |||||||| ||||| |||| || |||||||    
T  50624812 taaaaccaatacgccagatatttgcagggaccatttccatatttaag 50624766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 39288294 - 39288530
Alignment:
Q  3 gattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatg 102  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39288294 gattcatattggatttggtctttgtaataggtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatg 39288393  T
Q  103 aaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaacta 201  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||| | |||||| |  |||||||||         |||||||||||| | ||    
T  39288394 aaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctttatttgaatggactaaaacaaaaaaatatatttttataaggatta 39288493  T
Q  202 aaaccaaaacgtcatatatttgctgggactattttca 238  Q
    |||| ||||||||| |||||||| ||||| |||||||    
T  39288494 aaactaaaacgtcagatatttgcagggaccattttca 39288530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 14602255 - 14602080
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  14602255 ttgattcatattggatttggtccttgtaatatttagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 14602156  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| || |||||||||    
T  14602155 tgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaac 14602080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 26244794 - 26244549
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26244794 ttgattcatattggatttggtccttgtaatatgtagaatatttaattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 26244695  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||| |||||||| |||||||| || ||||||| ||        |||||||| | | ||    
T  26244694 tgaaatgattttacaaggattaaaactaaataccaaggaccaaaatcaaatattctatatttgcagggactaaatcc-aaaaaaatatttttacagggac 26244596  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| |||| |||||||| ||||| |||| || |||||||    
T  26244595 taaaaccaaaatgtcagatatttgcagggaccatttccatatttaag 26244549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 42154995 - 42154819
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  42154995 ttgattcatattggatttggtccttgtaatatttagaatatttgattttaatccctcaaaacgaggactaaaatgaatattatagggaccagtttcaata 42154896  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| || ||||||||||    
T  42154895 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaacc 42154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43191794 - 43191970
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  43191794 ttgattcatattggatttggtctttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 43191893  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||||||| ||  |||||||||    
T  43191894 tgaaatgattttacaaggatcaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaggaactaaaacc 43191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 47829207 - 47829032
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  47829207 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattttagtttctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 47829108  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||||| || |||||||||    
T  47829107 tgaaatgattttacaaggattaaaagaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 47829032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 10914019 - 10913843
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  10914019 ttgattcatattggaattggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatctcaata 10913920  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| |||||||||||| ||| |||| |||||||||||| |||||||| || ||||||||||    
T  10913919 tgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc 10913843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12322337 - 12322092
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||   |||||| ||||||||||||||||||||||| ||||||||||||||    
T  12322337 ttgattcatattagatttggtccttgtaatatgtagaatatttgaatttagtaaatcaaaatgaggactaaaatgaatattatagagaccaatttcaata 12322238  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||| ||||| |||||| |||||||||||| ||||||||||| |||||| |||        |||||||||| | ||    
T  12322237 tgaaatgattttacaaggattaaaacaatatacctaggaccaaaaccaaatattctatatttgtagggactaatacc-aaaaaaatatttttatagggac 12322139  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||||| |||||| | | ||| ||||||| |||||||    
T  12322138 taaaaccaaaacgtcagatatttacagagaccattttcatatttaag 12322092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 37172386 - 37172562
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||    
T  37172386 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatattaata 37172485  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||||| | || ||||||||||    
T  37172486 tgaaatgattttacaatgattaaaacaaaataccaaagaccaaaaccaaatattctatattcgcagggactaaaacc 37172562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 78 - 251
Target Start/End: Complemental strand, 18963777 - 18963604
Alignment:
Q  78 tattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||||| |||||||| |  ||||||||||    
T  18963777 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaatgaccaaaaccaaatattctatatttgcaaggactaaaacc 18963678  T
Q  177 nnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
            |||||||||| | ||||||||||||||| |  |||||||| ||||| |||| |||||||||| ||||    
T  18963677 -aaaaaaatatttttatagggactaaaaccaaaacgccggatatttgcagggaccatttccacatttaagccttt 18963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 50096347 - 50096516
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| |||||||||||   |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||||    
T  50096347 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgtagggactaaaac 50096446  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||  ||||||||| |||| |||||||| |||||||||||||||||||||    
T  50096447 c-aaaaaattatttttacacggacctaaaccaaaatgtcagatatttgcagggactattttcacatttaag 50096516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 251
Target Start/End: Complemental strand, 20061967 - 20061793
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| || |||||||||    
T  20061967 atattacaaggaccaaatccaatatgaatcaattttacaaggagtaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 20061868  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| ||||||| ||||    
T  20061867 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaagccttt 20061793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 28031861 - 28032030
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| || ||||||||     
T  28031861 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaa- 28031959  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  28031960 ctaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 28032030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 29584635 - 29584495
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    |||||||||||| | ||  | |||||||||||||||||| |||||  ||| |||||||  ||||||||||||||||||| || |||||| ||||||||||    
T  29584635 attcatattggaataggtacctgtaatatgtagaatattcgatttgtgtccctcaaaataaggactaaaatgaatattagagagaccaacttcaatatga 29584536  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    |  |||||| |||||||||| |||| | |||||| ||||||    
T  29584535 atagattttgcaaggactaagacaatacaccaagtaccaaa 29584495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 42154963 - 42155132
Alignment:
Q  76 aatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||||| | ||||||| | |||||||||   |||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||| || ||||||||    
T  42154963 aatattacaaggaccaaatccaatatgaatcaattttataaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaa 42155062  T
Q  175 ccnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||        |||||||| | || |||||||||||| |||| |||||| | ||||||||||||| |||||||    
T  42155063 cc--aaaaaatatttttacaggatctaaaaccaaaatgtcagatatttacagggactattttcatatttaag 42155132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 50625011 - 50625147
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||        | |||||| | | |||||||||    
T  50625011 attttacagggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc---aaatttttttttacagggactaaaacc 50625107  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| |||||||| ||||||||||||| |||||||    
T  50625108 aaaatgtcagatatttgcagggactattttcatatttaag 50625147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 246
Target Start/End: Complemental strand, 39288313 - 39288152
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa--ccaaatattttatatttgtagagactaaaaccnnnnnnnn 184  Q
    |||||| | |||||||||   |||||||||||||||||||||||||||||||||||||  | |||| ||||||||||| || |||||||| |            
T  39288313 gaccaaatccaatatgaatctattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttatatttgcagtgactaaaatcaaaaaaaa 39288214  T
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||| |   ||||||| ||||| ||||||||||||  ||||||||||||| |||||||    
T  39288213 tatttttacagagactaaaatcaaaatgtcatatatttggagggactattttcatatttaag 39288152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 10913988 - 10914088
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||||| |||||||||   |||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||| || |||||||||    
T  10913988 atattacaaggaccaattccaatatgaatcaattttacaaggactgaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 10914087  T
Q  176 c 176  Q
    |    
T  10914088 c 10914088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 51999622 - 51999546
Alignment:
Q  99 tatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||||||||||||||||||||||||||| ||||||   ||||||||| |||||||||| ||||||||||||    
T  51999622 tatgaaatgattttacaaggactaaaacaaaatatcaaggattaaaaccaaattttttatatttctagagactaaaa 51999546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 246
Target Start/End: Complemental strand, 43191815 - 43191656
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnnt 185  Q
    |||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| || ||||||||||        |    
T  43191815 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaacc-aaaaaaat 43191717  T
Q  186 atttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||| | | |||||||| ||||  ||| |||||||| ||||| ||||||| |||||||    
T  43191716 atttttacagggactaaaactaaaatatcagatatttgcagggacaattttcatatttaag 43191656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 47829176 - 47829275
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| |||||||||||   ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||| || |||||||||    
T  47829176 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttgcagggactaaaac 47829275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 7337075 - 7337236
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatat-tatagggaccaatttcaat 99  Q
    |||||| ||||||||||||| |||||||| ||||| |||||||||||||| || |||||||  |  |||||||||||||| |||  |||||||||| |||    
T  7337075 ttgatttatattggatttggtccttgtaacatgtataatatttgattttaatccctcaaaataaaaactaaaatgaatatatatcaggaccaattttaat 7337174  T
Q  100 atgaaatgattttacaaggactaaaacaaaataccaag-gaccaaaccaaatattttatattt 161  Q
     || ||||  |||||||||||||||| |||  ||||||  || |||| ||| |||||||||||    
T  7337175 ttg-aatggatttacaaggactaaaataaagcaccaagtaacaaaacaaaagattttatattt 7337236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 14602223 - 14602323
Alignment:
Q  76 aatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||||| | ||||||| | |||||||||   ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||| || ||||||||    
T  14602223 aatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataacaaggaccaaaaccaatttttttatatttgcagggactaaaa 14602322  T
Q  175 c 175  Q
    |    
T  14602323 c 14602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 251
Target Start/End: Complemental strand, 37172417 - 37172243
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| | ||| ||||| ||||||||||| || ||||||||     
T  37172417 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggatcaaaatcaaattttttatatttgaagggactaaaat 37172318  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||| | | ||||||||||||| | || |||||||| | ||||||||||| ||||||| ||||    
T  37172317 c-aaaaatatatttttacagggactaaaaccaaaatgacagatatttgcagagactattttcatatttaagccttt 37172243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 33802 - 33871
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||  ||||| |||||||    
T  33802 attttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttacagagaataaaacc 33871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 26244763 - 26244932
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||| |||||||||||||||||||||| | ||||||||| || |||||||| || ||||||||     
T  26244763 atattacaaggaccaaatccaatatgaatcaattttacaatgactaaaacaaaataccaaggatcaaaaccaaattttctatatttgcagggactaaaat 26244862  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||  | | | ||||||||||| |||| |||||||| || ||||||||||||||||||    
T  26244863 c-aaaaaaatattttttcagggattaaaaccaaaatgtcagatatttgcaggaactattttcacatttaag 26244932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 39027606 - 39027481
Alignment:
Q  121 taaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaaacgtcatata 219  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| || ||||||||||        |||||||| | | ||||||| ||||| |||| |||    
T  39027606 taaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaacc-aaaaaaatatttttacagggactaaaagcaaaatgtcagata 39027508  T
Q  220 tttgctgggactattttcacatttaag 246  Q
    ||| | |||||||||||||||||||||    
T  39027507 tttccggggactattttcacatttaag 39027481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 33619065 - 33618973
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagaga 168  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  33619065 atattacaaggaccaaatccaatatgaatcaattttacaaagacgaaaacaaaataccaacgaccaaaaccaaatattttatatttgcagaga 33618973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 12322337 - 12322477
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||  ||||| || |||||||| |        |||||||| | | | |||||||    
T  12322337 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaaatatttttacagggattaaaacc 12322436  T
Q  207 aaaa-cgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||  |||| |||||| | ||||||||||||| |||||||    
T  12322437 aaaattgtcagatatttacggggactattttcatatttaag 12322477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 52490119 - 52490079
Alignment:
Q  64 aggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  52490119 aggactaaaataaatattatagggaccaatttcaatatgaa 52490079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 11200353 - 11200429
Alignment:
Q  28 aatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    |||||||||| ||||| ||| |||   |||||||  | |||||||||||||||||||| ||||||||| ||||||||    
T  11200353 aatatgtagagtatttaattatagctcctcaaaataaagactaaaatgaatattatagtgaccaattttaatatgaa 11200429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 14602345 - 14602391
Alignment:
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  14602345 taaaaccaaaatgtcagatatttgcagggactattttcatatttaag 14602391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 44561760 - 44561679
Alignment:
Q  22 ccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    |||||||||||| | | ||||||||||||||| ||||||   |||| | |||||||||||| | |||||||||| ||||||||    
T  44561760 ccttgtaatatgaaaattatttgattttagtccctcaaactaagga-ttaaatgaatattacaaggaccaattttaatatgaa 44561679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 47829293 - 47829342
Alignment:
Q  196 gaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||||||||||||| |||| |||||||| ||||| ||||||| ||||||    
T  47829293 gaactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 47829342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 30609004 - 30609249
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30609004 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 30609103  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||||        |||||||||| | ||    
T  30609104 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcatggactaaaacc-caaaaaatatttttatagggac 30609202  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||  || |||||||| ||||| ||||||| |||||||    
T  30609203 taaaaccaaaacaccagatatttgcagggaccattttcatatttaag 30609249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8936689 - 8936444
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8936689 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtctctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 8936590  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||| || ||||||||||        |||||||||| | ||    
T  8936589 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-aaaaaaatatttttatagggac 8936491  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||| | |||||||| | ||| |||| || |||||||    
T  8936490 taaaaccaaaacgtaagatatttgcggagaccatttccatatttaag 8936444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 5924072 - 5923826
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5924072 ttgattcataatggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattctagggaccaatttcaata 5923973  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||| || ||||||||||        |||||||||| | ||    
T  5923972 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaaatatttttatagggac 5923873  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||  | |||||||| ||||| |||| || |||||||    
T  5923872 taaaaccaaaacgcaagatatttgcagggaccatttccatatttaag 5923826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8926432 - 8926187
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  8926432 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtctctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 8926333  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||| || ||||||||||        |||||||||| | ||    
T  8926332 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-aaaaaaatatttttatagggac 8926234  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||| | |||||||| | ||| |||| || |||||||    
T  8926233 taaaaccaaaacgtaagatatttgcggagaccatttccatatttaag 8926187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 31717420 - 31717170
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  31717420 ttgattcatattggatttggtccttgtaatatgtagaatatttgtttttagtccctcaaaatgaggactaaaatgaatattatatggaccaatttcaata 31717321  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||||        |||||||||| | |     
T  31717320 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaacc-aaaaaaatatttttatagggat 31717222  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||||||||||||||| |||||||| ||||| |||| || ||||||| ||||    
T  31717221 taaaaccaaaacgtcaaatatttgcagggaccatttccatatttaagccttt 31717170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 29819626 - 29819455
Alignment:
Q  6 tcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaa 105  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29819626 tcatattggatttggtccttgtaatatgtagaatatttaattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatgaaa 29819527  T
Q  106 tgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  29819526 tgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 29819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 19661487 - 19661737
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| |    
T  19661487 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaagactaaaatgaatattatagggaccaatttcaaca 19661586  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || |||||||| |        |||||||||| | ||    
T  19661587 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaatc-aaaaaaatatttttatagggac 19661685  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||||| || ||||||||  |||| |||| || ||||||| ||||    
T  19661686 taaaaccaaaacgccagatatttgcaaggaccatttccatatttaagccttt 19661737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 3345158 - 3345402
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3345158 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgagg-ctaaaatgaatattatagggaccaatttcaata 3345256  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||| || |||||||  ||  |||||||||        |||||||||| | ||    
T  3345257 tgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatgttctatatttacaggaactaaaacc-aaaaaaatatttttatagggac 3345355  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| || |||||||| ||||| |||| || |||||||    
T  3345356 taaaaccaaaacgccagatatttgcagggaccatttccatatttaag 3345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 17238279 - 17238114
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  17238279 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattattgggaccaatttcaata 17238180  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtag 165  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||    
T  17238179 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtag 17238114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 33783535 - 33783711
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  33783535 ttgattcatattgaatttggtccttgtagtatgtagaatatttgattttagtccctcaaaatgaggactaaaaagaatattatagggaccaatttcaata 33783634  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  33783635 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 33783711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 3485020 - 3484853
Alignment:
Q  10 attggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgat 109  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3485020 attggttttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatgaaatgat 3484921  T
Q  110 tttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||| || ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  3484920 tttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 3484853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 28853730 - 28853507
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  28853730 ttgattcatattagatttggttcttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatatggaccaatttcaata 28853631  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| |||||||| || ||||||||||        |||||||| | | ||    
T  28853630 tgaaatgattttagaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaaccaaaaaaaatatttttacagggac 28853531  T
Q  200 taaaaccaaaacgtcatatatttg 223  Q
    ||||||||||||| || |||||||    
T  28853530 taaaaccaaaacgccaaatatttg 28853507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16525438 - 16525262
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| || |||||||||||    
T  16525438 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgagtattatagagatcaatttcaata 16525339  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| |||||||||||||||| ||   ||||||||||||||||||||| || ||||||||||    
T  16525338 tgaaatgattttacaaggattaaaacaaaataccaaagataaaaaccaaatattttatatttgcagggactaaaacc 16525262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 5404815 - 5404672
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  5404815 ttgattcatattggattcggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggactaatttcaata 5404716  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  5404715 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaa 5404672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 77 - 251
Target Start/End: Original strand, 17238248 - 17238422
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| |||||||||||   |||||||||||||||||||||||||||||||||| ||||||||| || |||||||| || |||||||||    
T  17238248 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcagggactaaaac 17238347  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||    
T  17238348 c-aaaaaattatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaagccttt 17238422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 5924072 - 5924210
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||         |||||||| | |||||||||||    
T  5924072 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaacataaaaaaatatttttacaggaactaaaacc 5924171  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    |||| |||| |||||||| ||||||||||||| ||||||    
T  5924172 aaaatgtcagatatttgcagggactattttcatatttaa 5924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4601198 - 4601071
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||  | |||||||||||||||  |||| | |||||| ||||    
T  4601198 ttgattcatattggatatggtccttgtaatatgtagaatatttgattttagtccctcaaaataaagactaaaatgaatat--taggtatcaatttaaata 4601101  T
Q  101 tgaaatgattttacaaggactaaaacaaaa 130  Q
    ||||  ||||||| | |||| |||||||||    
T  4601100 tgaatagattttatagggaccaaaacaaaa 4601071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 19661518 - 19661350
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| |||||||||||   ||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||| || |||||||||    
T  19661518 atattacaaggaccaaattcaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 19661419  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| |  |||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  19661418 c--aaaaaatatttttacagaaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 19661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 30609035 - 30608866
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  30609035 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 30608936  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | |||||||| ||||  ||| |||||||| ||||||||||||| |||||||    
T  30608935 c-aaaaaaatatttttacagggactaaaactaaaatatcaaatatttgcagggactattttcatatttaag 30608866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 3485019 - 3485157
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| || |||||||| |        |||||||  | | |||||||||    
T  3485019 attttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaatc-aaaaaaatatttttgcagggactaaaacc 3485117  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| |||||||| |||||||||||||||||||||    
T  3485118 aaaatgtcacatatttgcagggactattttcacatttaag 3485157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 26272194 - 26272363
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||  ||||||||    
T  26272194 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatataccaaggaccaaaatcaaattttttatatttgcaggaactaaaac 26272293  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||||| | ||||||||||||| |||| |||||| | ||||||||||||| |||||||    
T  26272294 c-aaaaatatatttttatagggactaaaaccaaaatgtcagatatttacagggactattttcatatttaag 26272363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 5404815 - 5404958
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||||||||| || |||| ||||||||| ||||||||||| || |||||||| |        ||||||||||   |||||||||    
T  5404815 attttacaaggactaaaacaaaatactaatgaccaaaaccaaattttttatatttgcagggactaaaatc-aaaaaaatatttttatagagactaaaacc 5404913  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||| |||| |||||||| ||||||||||||| ||||||| ||||    
T  5404914 aaaatgtcagatatttgcagggactattttcatatttaagccttt 5404958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 3345189 - 3345020
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||     
T  3345189 atattacaaggaccaaatccaatatgaatcaattttacaagaagtaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa- 3345091  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| ||| |||||||||||||  ||| |||| ||| ||||||||||||| |||||||    
T  3345090 cgaaaaaaatatttttacaaggactaaaaccaaaatatcagatatctgcagggactattttcatatttaag 3345020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 28853730 - 28853860
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||  |||||||||        |||||||||| | |||||||||    
T  28853730 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaacc-aaaaaaatatttttatagggactaaaacc 28853828  T
Q  207 aaaacgtcatatatttgctgggactattttca 238  Q
    |||| |||| |||||||  |||||||||||||    
T  28853829 aaaatgtcagatatttgtagggactattttca 28853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 8926401 - 8926572
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaa--ataccaaggacc-aaaccaaatattttatatttgtagagactaaa 173  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||  |||| ||||||| ||||||||| ||||||||||| || |||||||    
T  8926401 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaa 8926500  T
Q  174 accnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||        |||||||| | | ||||||||||||| |||| |||||| | ||||||||||||| |||||||    
T  8926501 acc-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccgggactattttcatatttaag 8926572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 8936658 - 8936829
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaa--ataccaaggacc-aaaccaaatattttatatttgtagagactaaa 173  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||  |||| ||||||| ||||||||| ||||||||||| || |||||||    
T  8936658 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaa 8936757  T
Q  174 accnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||        |||||||| | | ||||||||||||| |||| |||||| | ||||||||||||| |||||||    
T  8936758 acc-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccgggactattttcatatttaag 8936829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18502736 - 18502788
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtc 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18502736 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtc 18502788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26272225 - 26272173
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtc 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26272225 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtc 26272173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 31717389 - 31717489
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| || |||||||||    
T  31717389 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 31717488  T
Q  176 c 176  Q
    |    
T  31717489 c 31717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 16525407 - 16525576
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||  || ||||||||     
T  16525407 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaatacgaaggaccaaaaccaaattttttatatttacagggactaaaa- 16525505  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| ||| |||||| |||||| |||| |||||||| | ||| ||||||| |||||||    
T  16525506 caaaaaaaatatttttacaaggactaaatccaaaatgtcagatatttgcggagacgattttcatatttaag 16525576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 246
Target Start/End: Complemental strand, 33783557 - 33783396
Alignment:
Q  86 ggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnn 184  Q
    ||||||| |||||||||||   ||||||||||||| ||||||||||| |||| ||| ||||||||| ||||||||||| |  |||||||||             
T  33783557 ggaccaaattcaatatgaatcaattttacaaggacaaaaacaaaatatcaagaaccaaaaccaaattttttatatttgcaaggactaaaactaaaaaaaa 33783458  T
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||| | ||| | |||||||||  ||| |||||||| |||||||| |||| |||||||    
T  33783457 tatttttacaggaattgaaaccaaaatatcagatatttgcagggactatcttcatatttaag 33783396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 9571627 - 9571779
Alignment:
Q  94 ttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntattttta 192  Q
    |||||||||||   |||||||||||||||||||||||||| ||||| | ||| ||||| ||| ||||||| || ||||||||||        ||||||||    
T  9571627 ttcaatatgaatcaattttacaaggactaaaacaaaatacgaaggatcaaaatcaaatttttcatatttgcagggactaaaacc-aaaaaaatattttta 9571725  T
Q  193 taagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
     | | |||||||| |||| |||| ||||||||  |||||||||||| |||||||    
T  9571726 cagggactaaaactaaaatgtcagatatttgcaaggactattttcatatttaag 9571779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 29819631 - 29819686
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  29819631 attttacaaggactaaaacaaaataccaatgaccaaaaccaaattttttatatttg 29819686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 5409217 - 5409283
Alignment:
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||   ||||||||||||| |||| |||||||| ||||||||||||| ||||||| ||||    
T  5409217 tatttttatagagactaaaaccaaaatgtcagatatttgcagggactattttcatatttaagccttt 5409283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 5140751 - 5140687
Alignment:
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtct 249  Q
    ||||||| || | ||||||||||||| |||| |||||||| ||||| |||| || ||||||||||    
T  5140751 tatttttgtagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaagtct 5140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22487465 - 22487220
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  22487465 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 22487366  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| |        |||||||||||| ||    
T  22487365 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaaac-aaaaaaatatttttataaggac 22487267  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||  || |||||||| ||||| |||| || |||||||    
T  22487266 taaaaccaaaacaccagatatttgcggggaccatttccatatttaag 22487220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 11021918 - 11021673
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  11021918 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 11021819  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||| |||| |        |||||||||| | ||    
T  11021818 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagggaccaaaatc-aaaaaaatatttttatagggac 11021720  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| || |||||||  ||||| ||||||| |||||||    
T  11021719 taaaaccaaaacgccagatatttgtagggaccattttcatatttaag 11021673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 989213 - 989463
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  989213 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 989312  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||| || || ||||||||||        |||||||||| | ||    
T  989313 tgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatattctatatctgcagggactaaaacc-aaaaaaatatttttatagggac 989411  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||||||||||||||| |||||||| ||||| |||| || ||||||| ||||    
T  989412 taaaaccaaaacgtcagatatttgcagggaccatttccatatttaagccttt 989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 5721192 - 5720953
Alignment:
Q  6 tcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaa 105  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5721192 tcatattggatttggtccttgtaatatgtagaatattttattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatgaaa 5721093  T
Q  106 tgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaa 204  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| | |||||||    
T  5721092 tgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc--aaaaaatatttttatagggactaaaa 5720995  T
Q  205 ccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||| || |||||||| ||||| |||| || |||||||    
T  5720994 ccaaaacgccagatatttgcagggaccatttccatatttaag 5720953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 46481162 - 46480986
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  46481162 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 46481063  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  46481062 tgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggactaaaacc 46480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17107677 - 17107501
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  17107677 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 17107578  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  17107577 tgaaatgattgtacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 17107501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17865221 - 17865045
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  17865221 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccattttcaata 17865122  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||||| || ||||||||||    
T  17865121 tgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaacc 17865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13683249 - 13683004
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13683249 ttgattcatattggatttggtccttataatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 13683150  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||||| |||||||  || ||||||||||        |||||||||| | ||    
T  13683149 tgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttacagggactaaaacc-aaaaaaatatttttatagggac 13683051  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| |||| |||||||| ||||  |||| || |||||||    
T  13683050 taaaaccaaaatgtcagatatttgcagggatcatttccatatttaag 13683004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 43750188 - 43749947
Alignment:
Q  5 ttcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43750188 ttcatattggatttggtccttgtaatatgtagaatattttattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatgaa 43750089  T
Q  105 atgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaa 203  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| ||||||||    
T  43750088 atgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttataggaactaaa 43749990  T
Q  204 accaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    | ||||||  || |||||||| ||||| |||| || |||||||    
T  43749989 atcaaaacaccagatatttgcagggaccatttccatatttaag 43749947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37815586 - 37815410
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  37815586 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccttcaaaatgaggactaaaatgaatattatagggaccaatttcaata 37815487  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||||    
T  37815486 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaacc 37815410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16959902 - 16960147
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16959902 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 16960001  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||| ||| |||| |  ||||||||||        |||||||||| | ||    
T  16960002 tgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggactaaaacc-aaaaaaatatttttatagggac 16960100  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| |  | |||||||| ||||| |||| || |||||||    
T  16960101 taaaaccaaaatgcaagatatttgcagggaccatttccatatttaag 16960147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 2184532 - 2184767
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||| |  |||||| |||||||||||||||||||||| | ||||| | |||||||||||||||||||||| |||||||||||||||    
T  2184532 ttgattcatattggattttgttcttgtagtatgtagaatatttgattttagaccctcaatatgaggactaaaatgaatattatatggaccaatttcaata 2184631  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataaga-a 198  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| || |    
T  2184632 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttataggaca 2184730  T
Q  199 ctaaaaccaaaacgtcatatatttgctgggactattt 235  Q
    ||||||||||||||||| |||||||| ||||| ||||    
T  2184731 ctaaaaccaaaacgtcagatatttgcagggaccattt 2184767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4712423 - 4712179
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  4712423 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtctcttaaaacgaggattaaaatgaatattatagggaccaatttcaata 4712324  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||| ||||| | ||||||||||||||||||| |||||||||||| |||||||| || |||||| |||         |   ||||| ||||    
T  4712323 tgaaatgattttataagga-ttaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaataccaaaaaaaa-aaaattataggaac 4712226  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| || |||||||| ||||| ||||||| |||||||    
T  4712225 taaaaccaaaacgccaaatatttgcagggaccattttcatatttaag 4712179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 12792710 - 12792884
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12792710 ttgattcatattagatttggtccttgtaacatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagtgaccaatttcaata 12792809  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||    
T  12792810 tgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 12792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 39385299 - 39385545
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  39385299 ttgattcatattggatttgatacttgtaatatgtagaatatttgattttagtccttcaaaatgaggactaaaatgaatattatagggaccaatttcaata 39385398  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||| ||||||| |||  ||||||||||||||||||||| || |||||||||         |||||||||| | |     
T  39385399 tgaaatgattttacaaggattaaaacaatataccaaagacaaaaaccaaatattttatatttgcagggactaaaacaaaataatatatttttatagggat 39385498  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| |||||||||| |||||||  ||||| |||| || |||||||    
T  39385499 taaaagcaaaacgtcagatatttgtagggaccatttccatatttaag 39385545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 46081533 - 46081762
Alignment:
Q  22 ccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggact 121  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46081533 ccttgcaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggatt 46081632  T
Q  122 aaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaaacgtcatatat 220  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||| ||||||| |        |||| | ||||| | |||||||||||||||| ||||    
T  46081633 aaaacaaaataccaaggaccaaaaccaaatattctatatttgcagaaactaaaa-caaaaaatatattctcataaggattaaaaccaaaacgtcagatat 46081731  T
Q  221 ttgctgggactattttcacatttaagtcttt 251  Q
    |||| || || ||||||| ||||||| ||||    
T  46081732 ttgcgggaaccattttcatatttaaggcttt 46081762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 26314613 - 26314863
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||    
T  26314613 ttgattcatattggatttggtccttgtagtatgtagaatatttgattttagtccctcaaaatgagaactaaaatgaatattatatggaccaatttcaata 26314712  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||  ||| ||||||||||||||||||| | |||||||||||| |||||||| || ||||||||||        |||||||||| | |     
T  26314713 tgaaatgattttacgtggattaaaacaaaataccaaggatctaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttatagggat 26314811  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||||| || ||||||||  |||  |||| || ||||||||||||    
T  26314812 taaaaccaaaacgccagatatttgccaggaacatttccatatttaagtcttt 26314863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16491892 - 16491716
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||    
T  16491892 ttgattcatattggatttggttcttgtaatatgtagaatatttgattttaatccctcaaaatgaggactaaaatgaatatcatagggaccaatttcaata 16491793  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||| |||||||| || || |||||||    
T  16491792 tgaaatgattttataaggattaaaataaaataccaaggaccaaaaccaaatattctatatttgcagggattaaaacc 16491716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13493022 - 13493198
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| |||||||| |||| | ||||||||||||||||||||||    
T  13493022 ttgattcatattggatttggttcttgtaatatgtagaatatttgattttagtccctcaaaatgaggactacaatgtacattatagggaccaatttcaata 13493121  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||| ||||||||||| ||||||||||||||| ||| | |||||||||||| |||||||| || ||||||||||    
T  13493122 tgaaatggttttacaaggattaaaacaaaataccatggatcaaaaccaaatattctatatttgcagggactaaaacc 13493198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 9301711 - 9301883
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  9301711 attcatattggatttggtcattgtaatatgtagaatattttattttagtc-ctcaaaatgaggactaaaatgaatattatacggaccaatatcaatatga 9301809  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| |  ||||||||||    
T  9301810 aatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcatggactaaaacc 9301883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32592881 - 32593054
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||| ||||||    
T  32592881 ttgattcatattggatttggtccttgtaatatatagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatatgaaccaatatcaata 32592980  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||| ||||| ||||||||||||||   |||| |||| ||||||| |||||||| || ||||||||||    
T  32592981 tgaaatgattttataaggattaaaacaaaatacc---gaccaaaactaaatattctatatttgcagggactaaaacc 32593054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 20046047 - 20045885
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| | ||||||||||||    
T  20046047 ttgatttatattggatttggtccttgtaatatgtagaatatttgattttagtccttcaaaatgaggactaaaatgaatattatagaggccaatttcaata 20045948  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    |||||| |||||| || || |||||||||| ||||| |||| |||| ||||||| ||||||||    
T  20045947 tgaaataattttataaagattaaaacaaaacaccaaagaccaaaactaaatattatatatttg 20045885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 37815555 - 37815725
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  37815555 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 37815654  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||||||||| ||||||| |||||||    
T  37815655 caaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgctgggacaattttcatatttaag 37815725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 4712392 - 4712560
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  4712392 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 4712491  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||||| | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  4712492 c--aaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 4712560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 250
Target Start/End: Complemental strand, 32592912 - 32592739
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||| || |||||||||    
T  32592912 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaac 32592813  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtctt 250  Q
    |        |||||||| ||| ||||||||||||| |||| |||||||| |||||||||||||||||||| ||||    
T  32592812 c-aaaaaaatatttttacaaggactaaaaccaaaatgtcaaatatttgcagggactattttcacatttaaatctt 32592739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 1106425 - 1106554
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || | |||||||||||||||||||||||||||||| || ||||  | || ||||||||||||||||  ||||||||||||||    
T  1106425 ttgattcatattggattcggtctttgtaatatgtagaatatttgattttagtctcttaaaataatgaataaaatgaatattataatgaccaatttcaata 1106524  T
Q  101 tgaaatgattttacaaggactaaaacaaaa 130  Q
    ||||   ||||||| | |||||||| ||||    
T  1106525 tgaataaattttaccaagactaaaataaaa 1106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 16959933 - 16959763
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||| |  |||||||||    
T  16959933 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcatggactaaaac 16959834  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||||| | |||||||| |||| |||| |||||||| ||||||||||||| |||||||    
T  16959833 caaaaaaaatatttttatagggactaaaactaaaatgtcagatatttgcagggactattttcatatttaag 16959763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 17865190 - 17865359
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||| || |||||||||    
T  17865190 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaac 17865289  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  17865290 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 17865359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 246
Target Start/End: Complemental strand, 26314611 - 26314476
Alignment:
Q  110 tttacaaggactaaaacaaaataccaaggaccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaa 209  Q
    |||||||||||||||||||||||||||||||||||   ||| ||||||||||| || ||||||||||        || ||||| | | ||||||||||||    
T  26314611 tttacaaggactaaaacaaaataccaaggaccaaaaacaattttttatatttgcagggactaaaacc-aaaaaaatagttttacagggactaaaaccaaa 26314513  T
Q  210 acgtcatatatttgctgggactattttcacatttaag 246  Q
    | |||| |||||||| |||||||||||||||||||||    
T  26314512 atgtcagatatttgcagggactattttcacatttaag 26314476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 43750161 - 43750259
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| | ||||||| | ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||    
T  43750161 atattacaaggaccaaatccaatatgaaacaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 43750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 13683218 - 13683301
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatat 159  Q
    |||||||| ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  13683218 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatat 13683301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 13493022 - 13492884
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||| |||||||||||||||| ||||||| |||| | |||| |||||| || ||||||||||        |||||||| | | |||||||||    
T  13493022 attttacaaggaataaaacaaaataccaaagaccaaaaccaatttttttttatttgcagggactaaaaccaaaaaaa-tatttttagagggactaaaacc 13492924  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| |||||||| ||||||||||||| |||||||    
T  13492923 aaaaagtcagatatttgcagggactattttcatatttaag 13492884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 46481131 - 46481217
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacca-aaccaaatattttatatttg 162  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  46481131 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccataaccaaattttttatatttg 46481217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 17107646 - 17107814
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||| |||||||||||||||||||||||||||||| ||| ||| | ||||||||||| || ||||||||     
T  17107646 atattacaaggaccaaatccaatatgaatcaattctacaaggactaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaat 17107745  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  17107746 c-aaaaaaatatttttacatg-actaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 17107814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 22487434 - 22487601
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |  |||||||||    
T  22487434 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttcatatttgcaaggactaaaac 22487533  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |         |||   | | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  22487534 caaaaaaaaaatt---acagggactaaaaccaaaatgtcaaatatttgcagggactattttcatatttaag 22487601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 2184532 - 2184464
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| || ||||||||||    
T  2184532 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttaatatttgcag-gactaaaacc 2184464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 9301729 - 9301641
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| | ||||||||| | ||||||||||||||||||||||||  |||||||| ||||||||| |||||| |||| || ||||||||    
T  9301729 gaccaaatccaatatgaattaattttacaaggactaaaacaaaatttcaaggaccaaaaccaaattttttatgtttgaagggactaaaa 9301641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 11021887 - 11021987
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||||||||||||||||| |||||| ||| ||||| |||||||||||||  |||||||||    
T  11021887 atattacaaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaataccgaggaccaaaatcaaattttttatatttgtaaggactaaaac 11021986  T
Q  176 c 176  Q
    |    
T  11021987 c 11021987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 16491892 - 16491947
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    |||||||||||||||||||||||||||||||||| ||||||| | |||||||||||    
T  16491892 attttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttg 16491947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 5721197 - 5721253
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc--aaaccaaatattttatatttg 162  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||| |||||||||||    
T  5721197 attttacaaggactaaaacaaaataccaatgaccaaaaaccaaattttttatatttg 5721253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 38050907 - 38051043
Alignment:
Q  26 gtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaa 125  Q
    ||||||| || |||||||||||||| || || ||||  |||| |||||||||||| ||||| | |||||| ||||| ||  ||||||| | | ||| |||    
T  38050907 gtaatatatataatatttgattttaatctcttaaaataaggattaaaatgaatatcataggaagcaattttaatataaatagattttataggaacttaaa 38051006  T
Q  126 caaaataccaagga-ccaaaccaaatattttatattt 161  Q
    ||||||| ||| || | |||| |||||||||||||||    
T  38051007 caaaatatcaaagagcaaaacaaaatattttatattt 38051043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 12792710 - 12792643
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||| || ||||||||    
T  12792710 attttacaaggattaaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggactaaaa 12792643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 6100534 - 6100587
Alignment:
Q  91 aatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||| ||||||||  ||||||| || |||||||||||||||||||||||||||    
T  6100534 aatttaaatatgaatagattttataaagactaaaacaaaataccaaggaccaaa 6100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 20046047 - 20046100
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatt 160  Q
    |||||||||| |||||||||||||| |||||||| ||||||||| |||||||||    
T  20046047 attttacaagaactaaaacaaaatagcaaggaccaaaaccaaattttttatatt 20046100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 28306970 - 28306867
Alignment:
Q  27 taatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaac 126  Q
    ||||||| ||||||||||||||||  | |||||||  ||||||||||||||| ||| || |||  |||| ||||| ||  ||||||| |||||  |||||    
T  28306970 taatatgcagaatatttgattttaacccctcaaaataaggactaaaatgaatgttagagagacacatttgaatataaatagattttaaaaggatcaaaac 28306871  T
Q  127 aaaa 130  Q
    ||||    
T  28306870 aaaa 28306867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 989244 - 989160
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatattt 161  Q
    |||||| | ||||||| |||||||||||   |||||||||||||| |||||||||| |||||| | ||||||| | ||||||||||    
T  989244 atattacaaggaccaaattcaatatgaatcaattttacaaggactgaaacaaaata-caaggatcaaaaccaatttttttatattt 989160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 7973807 - 7973738
Alignment:
Q  32 tgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatat 101  Q
    |||||||||||||||||||||| || ||||  | |||| |||||||| | | || |||||||||||||||    
T  7973807 tgtagaatatttgattttagtcccttaaaataaagactcaaatgaatttaacagtgaccaatttcaatat 7973738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 13683319 - 13683376
Alignment:
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatt 242  Q
    |||||||| | | ||||||| ||||| |||| |||||||| |||||||||||||||||    
T  13683319 tatttttacagggactaaaatcaaaatgtcagatatttgcagggactattttcacatt 13683376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24332507 - 24332285
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24332507 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 24332408  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||        |||||||||| | |     
T  24332407 tgaaatgattttacaaggattaaaacaaaataccaaggacccaaaccaaatattctatatttgcagggactaaaaccaaaaaaaatatttttatagggat 24332308  T
Q  200 taaaaccaaaacgtcatatattt 222  Q
    |||||||||||||||||||||||    
T  24332307 taaaaccaaaacgtcatatattt 24332285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 31403051 - 31403296
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  31403051 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatctcaata 31403150  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
     |||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| || ||||||||||        |||||||||||||||    
T  31403151 agaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgaagggactaaaacc-aaaaaaatatttttataagaac 31403249  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||  || |||||||| ||||| |||| || |||||||    
T  31403250 taaaaccaaaacaccagatatttgcagggaccatttccatatttaag 31403296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13154484 - 13154239
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13154484 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 13154385  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| || ||||||||||        |||||||| | | ||    
T  13154384 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaacc-aaaaaaatatttttagagggac 13154286  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||  || |||||||| ||||| |||| || |||||||    
T  13154285 taaaaccaaaacaccagatatttgcagggaccatttccatatttaag 13154239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 6943902 - 6943657
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||||||||    
T  6943902 ttgattcatattggatttggtccttgtaatatatagaatatttgattttagtccttcaaaatgaggactaaaatgaatattatagggactaatttcaata 6943803  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || |||||||| |        |||||||||| | ||    
T  6943802 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaatc-aaaaaaatatttttatagggac 6943704  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| || |||||||| ||||| |||| || |||||||    
T  6943703 taaaaccaaaacgccaaatatttgcggggaccatttccatatttaag 6943657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9180290 - 9180045
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||| ||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9180290 ttgattcagattggatttggtccttataatacgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 9180191  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacca-aaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||| |  ||||||||||        |||||||||| |||     
T  9180190 tgaaatgattttacaaggattaaaacaaaaaaccaaggaccacaaccaaatattctatatttgcatggactaaaacc-aaaaaaatatttttataggaat 9180092  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| ||||||| || |||||||| ||||| ||||||| |||||||    
T  9180091 taaaatcaaaacgccagatatttgcagggaccattttcatatttaag 9180045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 31685910 - 31685739
Alignment:
Q  6 tcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaa 105  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31685910 tcatattggatttggtctttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaa 31685811  T
Q  106 tgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||||    
T  31685810 tgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaacc 31685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 18764423 - 18764598
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| || ||||| ||||||| |||||||||||||||||||||    
T  18764423 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccttcaaaatgacgactataatgaattttatagggaccaatttcaata 18764522  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||    
T  18764523 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 18764598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 6892023 - 6891849
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||    
T  6892023 ttgattcatattcgatttggtccttgtaatatgtagaatatttaattttagtccctcaaaatgaggactaaaataaatattatagggaccaattttaata 6891924  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||    
T  6891923 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 3272965 - 3272822
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3272965 ttgattcatattggatttggtctttgtaatatgtagaatatttgattttaatccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 3272866  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  3272865 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaa 3272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 26479453 - 26479666
Alignment:
Q  22 ccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggact 121  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  26479453 ccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggactaatttcaatatgaaatgattttacaaggatt 26479552  T
Q  122 aaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaaacgtcatatat 220  Q
    |||||||||||| ||||||| |||||||||||| |||||||| || ||||||||||        | |||||||| | ||||||||||||||| || ||||    
T  26479553 aaaacaaaatactaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaatttttt-tttttatagggactaaaaccaaaacgccagatat 26479651  T
Q  221 ttgctgggactattt 235  Q
    |||| ||||| ||||    
T  26479652 ttgcagggaccattt 26479666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 31186618 - 31186374
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| |||| ||||    
T  31186618 ttgattcatattggatttggtccttataatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattataaggaccgattttaata 31186519  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    |||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||||||| || |||||||| |        |||||||||| | ||    
T  31186518 tgaaatgattttacaa-gattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggactaaaatc-aaaaaaatatttttatagggac 31186421  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| || |||||||| ||||| |||| || |||||||    
T  31186420 taaaaccaaaacgccagatatttgcagggaccatttccatatttaag 31186374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13405693 - 13405532
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||| |||||||||||||||    
T  13405693 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtcccttgaaatgaggactaaaatgaatattataaggaccaatttcaata 13405594  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatattt 161  Q
    |||||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||||||    
T  13405593 tgaaatgattttacaatgattaaaacaaaataccaaagaccaaaacaaaatattctatattt 13405532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 220757 - 220581
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||  | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  220757 ttgattcatattggatttggtctttgtaatatgtagaatatttgattttaatcctttaaaatgaggattaaaatgaatattatagtgaccaatttcaata 220658  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    | ||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  220657 taaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 220581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 689912 - 689736
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||  | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  689912 ttgattcatattggatttggtctttgtaatatgtagaatatttgattttaatcctttaaaatgaggattaaaatgaatattatagtgaccaatttcaata 689813  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    | ||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  689812 taaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 689736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 734380 - 734204
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||  | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  734380 ttgattcatattggatttggtctttgtaatatgtagaatatttgattttaatcctttaaaatgaggattaaaatgaatattatagtgaccaatttcaata 734281  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    | ||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  734280 taaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 734204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 858276 - 858100
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||  | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  858276 ttgattcatattggatttggtctttgtaatatgtagaatatttgattttaatcctttaaaatgaggattaaaatgaatattatagtgaccaatttcaata 858177  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    | ||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  858176 taaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 858100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 2835349 - 2835125
Alignment:
Q  22 ccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggact 121  Q
    |||||||||||| | ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||| || |    
T  2835349 ccttgtaatatgcataatatttgattttagtccctcaaaatgaggattaaaatgaatattatagggaccaatttcagtacgaaatgattttacaatgatt 2835250  T
Q  122 aaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaaacgtcatatat 220  Q
    ||||||||||||| |||||| ||||||||||||||||||||  |||||||||||||        ||||||||||  ||||||||||||||| ||| ||||    
T  2835249 aaaacaaaataccgaggaccaaaaccaaatattttatatttacagagactaaaacc-aaaaaaatatttttatagaaactaaaaccaaaacatcagatat 2835151  T
Q  221 ttgctgggactattttcacatttaag 246  Q
    |||| | ||| |||| || |||||||    
T  2835150 ttgcagagaccatttccatatttaag 2835125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 37586159 - 37586307
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  37586159 attcatattg-atttggtccttgtaatatttagaatatttgattttagtccctcaaaatgaagactaaaatgaatattatatggaccaatttcaatatga 37586257  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatat 152  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  37586258 aatgattttaccaggattaaaacaaaataccaaggaccaaaaccaaatat 37586307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 27993419 - 27993577
Alignment:
Q  5 ttcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||  || |||||||| |||||||||||||||||||||| ||||||    
T  27993419 ttcacattggatttggtccttgtaacatgtagaatatttgattttagtccctcaaaataagaactaaaataaatattatagggaccaatttcattatgaa 27993518  T
Q  105 atgattttacaaggactaaaacaaaataccaaggaccaaaccaaa-tattttatatttg 162  Q
      ||||||||| |||||||||||||| ||||||||||||| |||| ||||| |||||||    
T  27993519 tggattttacagggactaaaacaaaacaccaaggaccaaaacaaattatttcatatttg 27993577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 28050721 - 28050879
Alignment:
Q  5 ttcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||  || |||||||| |||||||||||||||||||||| ||||||    
T  28050721 ttcacattggatttggtccttgtaacatgtagaatatttgattttagtccctcaaaataagaactaaaataaatattatagggaccaatttcattatgaa 28050820  T
Q  105 atgattttacaaggactaaaacaaaataccaaggaccaaaccaaa-tattttatatttg 162  Q
      ||||||||| |||||||||||||| ||||||||||||| |||| ||||| |||||||    
T  28050821 tggattttacagggactaaaacaaaacaccaaggaccaaaacaaattatttcatatttg 28050879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 20112658 - 20112533
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaata-ttatagggaccaatttcaatatg 102  Q
    |||||||| |||||| | |||||||||| ||||||||||| |||||||||  |||||| ||||||||||||||||| ||||||  |||||||||||||||    
T  20112658 attcatataggattttgtccttgtaatacgtagaatatttaattttagtccttcaaaatgaggactaaaatgaatatttatagtaaccaatttcaatatg 20112559  T
Q  103 aaatgattttacaaggactaaaacaa 128  Q
    ||||||||||||||||| ||||||||    
T  20112558 aaatgattttacaaggattaaaacaa 20112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 246
Target Start/End: Original strand, 3272944 - 3273103
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnnt 185  Q
    |||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| || |||||||| |        |    
T  3272944 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaagttttttatatttgcagggactaaaatc-aaaaaaat 3273042  T
Q  186 atttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||| | ||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  3273043 atttttatagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaag 3273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 31403082 - 31402912
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||| |||||||| |||||| ||||||| |||||||||||||||||| || |||||||||    
T  31403082 atattacaaggaccaaatccaatatgaatcaattttacaaagacgaaaacaaattaccaacgaccaaaaccaaatattttatatttgcagggactaaaac 31402983  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| ||| |||||||||||||  ||| |||||||| ||||||||||||| |||||||    
T  31402982 cccaaaaaatatttttacaaggactaaaaccaaaatatcagatatttgcagggactattttcatatttaag 31402912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 18764454 - 18764285
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||| ||||||||||||||| ||||||| |||||  ||||||||||| || |||| ||||    
T  18764454 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaagaccaaaaccaaagtttttatatttgaagggactcaaac 18764355  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| ||| ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  18764354 caaaaaaa-tatttttacaaggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 18764285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 245
Target Start/End: Original strand, 13405662 - 13405830
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  13405662 atattacaaggaccaaatccaatatgaatcaattttacaaggaataaaacaaaataccaaggaccaaaaccaaattttttatatttgaagggactaaaac 13405761  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    |        |||||||| | | | ||||||||||| |||| |||||||| |  |||||||||||||||||    
T  13405762 c-aaaaaaatatttttacagggattaaaaccaaaatgtcaaatatttgcagaaactattttcacatttaa 13405830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 246
Target Start/End: Complemental strand, 26479460 - 26479326
Alignment:
Q  111 ttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaa 209  Q
    |||||||||||||||||||||||||| |||| ||||||||  ||||||||||| || ||||||||||        | |||||| | | ||||||||||||    
T  26479460 ttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagtgactaaaacc--aatttttttttttacagggactaaaaccaaa 26479363  T
Q  210 acgtcatatatttgctgggactattttcacatttaag 246  Q
    | |||| |||||||| |||||||||||||||||||||    
T  26479362 atgtcaaatatttgcagggactattttcacatttaag 26479326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 6943871 - 6944040
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaac-caaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||| |||||| |||| ||||||  ||||| ||| ||||||| || |||||||||    
T  6943871 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaataaaatatcaagaaccaaaatcaaatttttcatatttgcagggactaaaac 6943970  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | ||||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  6943971 caaaaaaa-tatttttacaggaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 6944040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 9180260 - 9180433
Alignment:
Q  78 tattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||| ||||||| | |||| ||||   ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |  ||||||||||    
T  9180260 tattataaggaccaaatccaatctgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaacc 9180359  T
Q  177 nnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
            |||||||| | | | ||||||||||| |||| |||||||| |||| ||| |||| ||||||||||||    
T  9180360 -aaaacaatatttttacagggattaaaaccaaaatgtcagatatttgcagggattatattcatatttaagtcttt 9180433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 36449108 - 36449201
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttca 97  Q
    |||| ||||||| |||| |||||||| || ||||| |||||||||||||| | |||||  |||||||||||||||||| |||||||||||||||    
T  36449108 attcgtattggaattggtccttgtaaaatatagaacatttgattttagtcccacaaaataaggactaaaatgaatattgtagggaccaatttca 36449201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 24332476 - 24332560
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatt 160  Q
    |||||| | ||||||| |||||||||||   |||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  24332476 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatt 24332560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 2835342 - 2835476
Alignment:
Q  111 ttacaaggactaaaacaaaataccaaggaccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaaccaaaa 210  Q
    ||||||||||||||||||||||||||| |||||| | ||| ||||||||||| || |||||||| |        |||||||| |   |||||||||||||    
T  2835342 ttacaaggactaaaacaaaataccaagaaccaaaaccaattttttatatttgcagggactaaaatc-aaaaaaatatttttacagcgactaaaaccaaaa 2835440  T
Q  211 cgtcatatatttgctgggactattttcacatttaag 246  Q
     |||| |||||||| ||||||||||||| |||||||    
T  2835441 tgtcagatatttgcggggactattttcatatttaag 2835476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 13154453 - 13154622
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||| || |||||||||    
T  13154453 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaac 13154552  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | | ||||| ||||| |||| |||||||  ||||||||||||| |||||||    
T  13154553 c-aaaaaaatatttttacagggattaaaatcaaaatgtcagatatttgtagggactattttcatatttaag 13154622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 31685916 - 31685985
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| || ||||||||||    
T  31685916 attttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagggactaaaacc 31685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 31186587 - 31186687
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||| ||||||| | |||||||||   ||||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||  || |||||||||    
T  31186587 atattataaggaccaaatccaatatgaatcaattttacaaggactacaacaaaataccaaggaccaaaaccaaattttttagatttacagggactaaaac 31186686  T
Q  176 c 176  Q
    |    
T  31186687 c 31186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 32399152 - 32399269
Alignment:
Q  24 ttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaa 123  Q
    ||||||||| ||||||||||||||| |||| |||||||  |  |||||||||||||||||| | |||||||||||||||||   |||||  | |||||||    
T  32399152 ttgtaatatctagaatatttgattt-agtccctcaaaataaa-actaaaatgaatattataagtaccaatttcaatatgaacatattttgtagggactaa 32399249  T
Q  124 aacaaaataccaaggaccaaa 144  Q
    ||||||| ||||| |||||||    
T  32399250 aacaaaa-accaatgaccaaa 32399269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 37586169 - 37586120
Alignment:
Q  95 tcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||    
T  37586169 tcaatatgaataaattttacaaggactaaaacaaaataccaaggaccaaa 37586120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37856463 - 37856350
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||| ||||||||||    |||||||||| |||| |||||||||||| || |||||||  ||||||||| ||| ||||  || ||| ||||||||||    
T  37856463 ttgattcttattggatttatctcttgtaatatatagagtatttgattttaatccctcaaaataaggactaaattgagtattgcagagactaatttcaata 37856364  T
Q  101 tgaaatgattttac 114  Q
    ||||  ||||||||    
T  37856363 tgaatagattttac 37856350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 31748400 - 31748508
Alignment:
Q  27 taatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaac 126  Q
    |||||||||||||||||| ||| |||| |||||||  ||||||||||| | ||||| | ||| | |||||||||||||   ||||| | |||||||||||    
T  31748400 taatatgtagaatatttggttt-agtccctcaaaataaggactaaaattattattacacggatcgatttcaatatgaacaaattttgc-aggactaaaac 31748497  T
Q  127 aaaataccaag 137  Q
    |||| ||||||    
T  31748498 aaaacaccaag 31748508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 6892023 - 6892059
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||||||||||||||||||||| |||||||||||||    
T  6892023 attttacaaggactaaaacaaaacaccaaggaccaaa 6892059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 2679117 - 2679220
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| |||| |||||||| |||| ||||||||||| ||| ||||||||||   |||| |  | ||||||| |||||||||||  || |||||| ||||    
T  2679117 ttgatttatataggatttggtccttataatatgtagagtatatgattttagttcatcaagataaagactaaactgaatattataaagatcaattttaata 2679216  T
Q  101 tgaa 104  Q
    ||||    
T  2679217 tgaa 2679220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 31186679 - 31186726
Alignment:
Q  198 actaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  31186679 actaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 31186726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 45151656 - 45151540
Alignment:
Q  25 tgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaa 124  Q
    ||||||||| |||||||||| ||||| |  |||||||  |  |||||||||||||||   | |||||||||||| |||||   | ||| |||||||||||    
T  45151656 tgtaatatgcagaatatttggttttaattcctcaaaataaaaactaaaatgaatatt---gcgaccaatttcaacatgaaccaacttttcaaggactaaa 45151560  T
Q  125 acaaaataccaaggaccaaa 144  Q
    | |||| |||| ||||||||    
T  45151559 ataaaacaccagggaccaaa 45151540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 6834636 - 6834580
Alignment:
Q  26 gtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatatta 82  Q
    |||||||||||||||||| |||||| || ||||||   | |||||||||||||||||    
T  6834636 gtaatatgtagaatattttattttaatccctcaaattaaagactaaaatgaatatta 6834580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 7e-77; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 42517112 - 42516867
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  42517112 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 42517013  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| || ||||||||||        |||||||||| ||||    
T  42517012 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaacc-aaaaaaatatttttataggaac 42516914  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| | || |||||||| ||||| |||| || |||||||    
T  42516913 taaaaccaaaatgccagatatttgcagggaccatttccatatttaag 42516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 34487387 - 34487142
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  34487387 ttgattcatattggatttggtcattgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagagaccaatttcaata 34487288  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    |||||||||||||||| || |||||||||||||||| |||  |||||||||||| |||||||| |||||||||||||        ||||||||||||| |    
T  34487287 tgaaatgattttacaacgattaaaacaaaataccaaagacaaaaaccaaatattctatatttgcagagactaaaacc-aaaaaaatatttttataagagc 34487189  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| || |||||||| || || ||||||| |||||||    
T  34487188 taaaaccaaaacggcagatatttgcaggaaccattttcatatttaag 34487142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24494 - 24670
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24494 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 24593  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
     |||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||| || ||||||||||    
T  24594 agaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 24670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 34595457 - 34595702
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  34595457 ttgattcatattagatttggtccttgtaatatgtagaatatttgaatttagtccctcaaaatgaggactgaaatgaatattatagggaccaatttcaata 34595556  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||| || ||||||| ||        |||||||||| | ||    
T  34595557 tgaaatgattttacaaggattaaaacaatataccaaggaccaaaaccaaatattctatatttgcagggactaaagcc-aaaaaaatatttttatagggac 34595655  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||||| |||||| | ||||| ||||||| |||||||    
T  34595656 taaaaccaaaacgtcagatatttacagggaccattttcatatttaag 34595702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 44219432 - 44219677
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  44219432 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatactagagggaccaatttcaata 44219531  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||||| ||| |||| || ||||||||||        |||||||||| | |     
T  44219532 tgaaatgattttacaaggattaaaacaaaataccaagggccaaaaccaaatattctatttttgcagggactaaaacc-aaaaaaatatttttatagggaa 44219630  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||  | |||||||| |||||||||| || |||||||    
T  44219631 taaaaccaaaacgcaagatatttgcagggactatttccatatttaag 44219677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19157938 - 19157762
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  19157938 ttgattcatattggattcggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattacagggaccaatttcaata 19157839  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  19157838 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 19157762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20757337 - 20757161
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  20757337 ttgattcatattggattcggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattacagggaccaatttcaata 20757238  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||    
T  20757237 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc 20757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 31579569 - 31579745
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31579569 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtacctcaaaatgaggactaaaatgaatattatagggaccaattttaata 31579668  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||| || ||||||||||    
T  31579669 tgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattttatatttgcagggactaaaacc 31579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 40729308 - 40729133
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  40729308 ttgattcatattcgatttggtccttgtaatatgtagaatatttaattttagtccctcaaaatgagaactaaaatgaatattatagggaccaattttaata 40729209  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||    
T  40729208 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 40729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13426431 - 13426659
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || ||||||| | |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13426431 ttgattcatattggatt-ggtccttgtagtgtgtagaatatttgattttagcccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 13426529  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||| | | ||    
T  13426530 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttagagggac 13426628  T
Q  200 taaaaccaaaacgtcatatatttgctgggac 230  Q
    |||||| ||||||||| |||||||| |||||    
T  13426629 taaaactaaaacgtcagatatttgcagggac 13426659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22364791 - 22364965
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||    
T  22364791 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaa-taggactaaaatgaatattata-ggaccaatttcaata 22364888  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| || ||||||||||    
T  22364889 tgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaacc 22364965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 35026689 - 35026514
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  35026689 ttgattcatattggatttggtccttgtaatatgtaaaatatttgattttagtccttcaaaacgaggactaaaatgaatattatagggaccaattttaata 35026590  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| |||||||||||||||| || | |||||||||||| |||||||| |  |||||||||    
T  35026589 tgaaatgattttacaaggattaaaacaaaataccaatgatcaaaaccaaatattctatatttgcatggactaaaac 35026514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 44483471 - 44483240
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  44483471 ttgattcatattggatttggtccttgtaata----gaatatttgattttggtctctcaaaatgaggactaaaatgaatattatagggactaatttcaata 44483376  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||||| || || ||||| |        |||||||||| | ||    
T  44483375 tgaaatgattttacaaggattaaaacaaaatatcaaggactaaaaccaaatattctatatttgcagggattaaaatcaaaaaaaatatttttatagggac 44483276  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattt 235  Q
    |||||||||||||||| |||||||| ||||| ||||    
T  44483275 taaaaccaaaacgtcagatatttgcagggaccattt 44483240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 19476639 - 19476465
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||    
T  19476639 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgagtactaaaatgaatattatagggaccaacttcaata 19476540  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||||||||||| || |||||  |||||||||| ||| |||||||||||| |||||||| || |||||||||    
T  19476539 tgaaatgattttacaa-gattaaaattaaataccaagaaccaaaaccaaatattctatatttgcagggactaaaac 19476465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22954478 - 22954645
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||||||| |||||||       
T  22954478 ttgattcatattgaatttggtccttgtaatatgtagaatatttgattctagtccctcaaaatgaggattaaaatgaatattatagggactaatttca--- 22954574  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
           |||||||||||| |||||||||||||||| |||| ||| |||||||| |||||||| || ||||||||||    
T  22954575 ------tattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgcagggactaaaacc 22954645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 23177292 - 23177144
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| || || ||||  ||||||||||||||||||||| | | |||||| ||||    
T  23177292 ttgattcatattggatttggtcattgtaatatgtagaatatttgattttaatcccttaaaataaggactaaaatgaatattatatgcatcaattttaata 23177193  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaaaccaaa 149  Q
    ||||   |||||| |  |||||||| ||||  ||||| |||||| ||||    
T  23177192 tgaataaattttagagagactaaaataaaactccaagaaccaaaacaaa 23177144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 23620130 - 23620067
Alignment:
Q  249 tttgttgatattacatggtggtgcagccttgtggctctgcatctaatggtatctattctgatcg 312  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23620130 tttgttgatattacatggtggtgcagctttgtggctctgcatctaatggtatctattctgatcg 23620067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 248
Target Start/End: Original strand, 42517081 - 42517252
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||| || |||||||||    
T  42517081 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggactaaaatcaaattttttatatttgcagggactaaaac 42517180  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtc 248  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  42517181 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcggggattattttcacatttaagtc 42517252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 77 - 249
Target Start/End: Complemental strand, 44219463 - 44219291
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| ||| ||||||||     
T  44219463 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttatagggactaaaaa 44219364  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtct 249  Q
    |        |||||||| |   ||||||||||||| |||| |||||||| ||||||||||||| ||||||||||    
T  44219363 c-aaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaagtct 44219291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 246
Target Start/End: Original strand, 44483449 - 44483609
Alignment:
Q  86 ggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnn 184  Q
    ||||||| | |||||||||   ||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||| || ||||||||||            
T  44483449 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaacc-aaaaaaa 44483547  T
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||| | | ||||||||||||| || | |||||||| |||||||||||||||||||||    
T  44483548 tatttttacagggactaaaaccaaaatgttaaatatttgcggggactattttcacatttaag 44483609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 251
Target Start/End: Original strand, 35026658 - 35026831
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||  ||||||||||||    
T  35026658 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttacagagactaaaac 35026757  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||| | ||||||||||||||| |||| |||||| | ||||||||||||| ||||||| ||||    
T  35026758 c-aaaaaaatatttttacatgaactaaaaccaaaatgtca-atatttacagggactattttcatatttaagccttt 35026831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 19157938 - 19158082
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||| || |||||||| |        |||||||| | | |||||||||    
T  19157938 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaa-ctaaaaaaatatttttacagggactaaaacc 19158036  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtctttg 252  Q
    |||| |||| |||||||| ||||||||||||| ||||||| |||||    
T  19158037 aaaatgtcagatatttgcagggactattttcatatttaagcctttg 19158082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 20757337 - 20757481
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||| || |||||||| |        |||||||| | | |||||||||    
T  20757337 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaa-ctaaaaaaatatttttacagggactaaaacc 20757435  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtctttg 252  Q
    |||| |||| |||||||| ||||||||||||| ||||||| |||||    
T  20757436 aaaatgtcagatatttgcagggactattttcatatttaagcctttg 20757481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 22364822 - 22364657
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||| | ||||||| | |||||||||   ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||    
T  22364822 atattacaaggaccaaatccaatatgaatcaattttgcaaggactaaaacaaaatatcaaggaccaaaccaaattttttatatttgcagggactaaaacc 22364723  T
Q  177 nnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
             |   ||| | | ||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  22364722 aaaaa----aaaattacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaag 22364657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 24525 - 24356
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| |||| || ||||| ||| ||||||||||| || |||||||||    
T  24525 atattacaaggaccaaatccaatatgaatcaattttacaaggaataaaacaaaatacaaaggtccaaaacccaattttttatatttgcagggactaaaac 24426  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  24425 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgggactattttcatatttaag 24356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 34487366 - 34487454
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||    
T  34487366 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttggagggactaaaa 34487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 19476608 - 19476707
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||    
T  19476608 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19476707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 22954509 - 22954410
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacca-aaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| |||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||| || |||||||||    
T  22954509 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccacaaccaatttttttatatttgcagggactaaaac 22954410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 40729308 - 40729446
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||| || ||||||||||        |||||||| | | |||||||||    
T  40729308 attttacaaggactaaaacaaaacaccaaggaccaaaacccaattttttatatttgcagggactaaaacc-aaaaaaatatttttacagggactaaaacc 40729406  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| ||||||||   ||||||||||| |||||||    
T  40729407 aaaatgtcagatatttgcaaagactattttcatatttaag 40729446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 829926 - 829994
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||| ||||    
T  829926 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 829994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 1195106 - 1195174
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||| ||||    
T  1195106 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 1195174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23190607 - 23190503
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgc-tcaaaacgaggactaaaatgaatattatagggaccaatttcaat 99  Q
    |||||| ||||||||||||| | |||||||||||| |||||||||||||| || | | ||||  ||||||||||||||||||||| | | |||||| |||    
T  23190607 ttgatttatattggatttggtcattgtaatatgtaaaatatttgattttaatcccttaaaaataaggactaaaatgaatattatatgtatcaattttaat 23190508  T
Q  100 atgaa 104  Q
    |||||    
T  23190507 atgaa 23190503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 309
Target Start/End: Complemental strand, 23567252 - 23567209
Alignment:
Q  266 gtggtgcagccttgtggctctgcatctaatggtatctattctga 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23567252 gtggtgcagccttgtggctctgcatctaatggtatctattctga 23567209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 31579600 - 31579500
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||| |||||||||||||||||||| ||| ||| | ||||||||||| || |||||||||    
T  31579600 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaac 31579501  T
Q  176 c 176  Q
    |    
T  31579500 c 31579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 34595457 - 34595390
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||  ||||| || ||||||||    
T  34595457 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttaatttgcagggactaaaa 34595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 23607823 - 23607773
Alignment:
Q  262 catggtggtgcagccttgtggctctgcatctaatggtatctattctgatcg 312  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  23607823 catggtggtgcagccttgtggctctgcatctgctggtatctattccgatcg 23607773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 23625987 - 23625933
Alignment:
Q  258 attacatggtggtgcagccttgtggctctgcatctaatggtatctattctgatcg 312  Q
    |||||| ||||||||| |||||||||||||||| |  ||||||||||||||||||    
T  23625987 attacagggtggtgcatccttgtggctctgcatatgttggtatctattctgatcg 23625933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 13426386 - 13426325
Alignment:
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||| | ||||||||||||||| |||| |||||||| ||||||||||| | |||||||    
T  13426386 tatttttacaggaactaaaaccaaaatgtcagatatttgcagggactattttgatatttaag 13426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 23573906 - 23573861
Alignment:
Q  264 tggtggtgcagccttgtggctctgcatctaatggtatctattctga 309  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||||    
T  23573906 tggtggtgcagcattgtggctttgcatctaaaggtatctattctga 23573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23590890 - 23590846
Alignment:
Q  265 ggtggtgcagccttgtggctctgcatctaatggtatctattctga 309  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||    
T  23590890 ggtggtgcaggcttgttgctctgcatctaatagtatctattctga 23590846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23601621 - 23601577
Alignment:
Q  265 ggtggtgcagccttgtggctctgcatctaatggtatctattctga 309  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||    
T  23601621 ggtggtgcagccttgcggctttgcatctaaaggtatctattctga 23601577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 23615203 - 23615157
Alignment:
Q  265 ggtggtgcagccttgtggctctgcatctaatggtatctattctgatc 311  Q
    ||||||||| ||||||||||||||||||  | |||||||||||||||    
T  23615203 ggtggtgcatccttgtggctctgcatctgctagtatctattctgatc 23615157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 7e-77; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 52835790 - 52835545
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  52835790 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 52835691  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  52835690 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttatagggac 52835592  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| ||||||| || |||||||| ||||| |||| || |||||||    
T  52835591 taaaatcaaaacgccagatatttgcagggaccatttccatatttaag 52835545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 27934696 - 27934446
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| |||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27934696 ttgatttatattggattcggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 27934597  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  27934596 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgaagggactaaaacc-aaaaaaatatttttatagggac 27934498  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||||| || |||||||| ||||| |||| || ||||||| ||||    
T  27934497 taaaaccaaaacgccagatatttgcagggaccatttccatatttaagccttt 27934446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49500088 - 49499843
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49500088 ttgatttatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 49499989  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  49499988 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggactaaaacc-caaaaaatatttttatagggac 49499890  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||  || ||||||||  |||| |||| || |||||||    
T  49499889 taaaaccaaaacaccagatatttgcaaggaccatttccatatttaag 49499843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 50645717 - 50645472
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50645717 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 50645618  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||| ||| |||| |  ||||||||||        |||||||||| ||||    
T  50645617 tgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggactaaaacc-aaaaaaatatttttataggaac 50645519  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||  | |||||||| ||||| |||| || |||||||    
T  50645518 taaaaccaaaacgcaagatatttgcagggaccatttccatatttaag 50645472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38807783 - 38807539
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  38807783 ttgattcatattggatttggtccttgtaatatgtaaaatatttgatttttgtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 38807684  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        ||||||||||||  |    
T  38807683 tgaaatgattttacaaggattgaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttataagggc 38807585  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||||||||||| || |||||| | ||||| ||||||| ||||||    
T  38807584 taaaaccaaaacgccagatatttacagggaccattttcatatttaa 38807539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 29838432 - 29838677
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29838432 ttgattcatattggatttagtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 29838531  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||| |||| |  ||||||||||        |||||||||| | ||    
T  29838532 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatttttgcaaggactaaaacc-aaaaaaatatttttatatggac 29838630  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||  | |||||||| ||||| |||| || |||||||    
T  29838631 taaaaccaaaacgcaagatatttgcagggaccatttccatatttaag 29838677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 32315515 - 32315758
Alignment:
Q  2 tgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatat 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  32315515 tgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatat 32315614  T
Q  102 gaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaact 200  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||  | ||||||||        |||||||| | | |||    
T  32315615 gaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtatggcctaaaacc--aaaaaatatttttacagggact 32315712  T
Q  201 aaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||  ||| |||||||| ||||| |||| || |||||||    
T  32315713 aaaaccaaaatatcagatatttgcagggaccatttccatatttaag 32315758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 26582750 - 26583000
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26582750 ttgattcatattggatttggtcattgtaatatgtagaatatttgattttaatccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 26582849  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| || |||||||| |        |||||||| | | ||    
T  26582850 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaatc-aaaaaaatatttttacagggac 26582948  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||| ||||| |||| |||||||| ||||| |||| || ||||||||||||    
T  26582949 taaaatcaaaatgtcagatatttgcagggaccatttccatatttaagtcttt 26583000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 16056587 - 16056365
Alignment:
Q  7 catattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaat 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  16056587 catattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaataaggactaaaatgaatattatagggaccaatttcaatatgaaat 16056488  T
Q  107 gattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaac 205  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||||||||    
T  16056487 gattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc--aaaaaatatttttatagggactaaaac 16056390  T
Q  206 caaaacgtcatatatttgctgggac 230  Q
    ||||||| || |||||||| |||||    
T  16056389 caaaacgccagatatttgcagggac 16056365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33162458 - 33162703
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||    
T  33162458 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttaatccctcaaaatgaggactaaaatgaatattatacggaccaatttcaata 33162557  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |||||||| |  ||||||||||        |||||||||| | ||    
T  33162558 tgaaatgattttacaaggattaacacaaaatatcaaggaccaaaaccaaatattctatatttgcaaggactaaaacc-aaaaaaatatttttatagggac 33162656  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||| ||||||||| |||||| | ||||| |||| || |||||||    
T  33162657 taaaactaaaacgtcagatatttacggggaccatttccatatttaag 33162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42093533 - 42093695
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  42093533 ttgattcatattggatttggtccttgtaatacgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattattgggaccaatttcaata 42093632  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||||    
T  42093633 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttg 42093695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27285214 - 27284970
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||  ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  27285214 ttgattcatattggatttggtccttataatatctagaatatttgattttagtacctcaaaatgaggactaaaatgaatat-atagagaccaatttcaata 27285116  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| ||||    
T  27285115 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttataggaac 27285017  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| ||||| | || |||||||| ||||| |||| || |||||||    
T  27285016 taaaatcaaaatgccagatatttgcagggaccatttccatatttaag 27284970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 46962720 - 46962965
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  46962720 ttgattcatattggattcagttcttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggatcaatttcaata 46962819  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||| || || |||||||        |||||||||| | ||    
T  46962820 tgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattctatatttgcagggattaaaacc-aaaaaaatatttttatagggac 46962918  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||| ||| || |||||||| ||||| |||| || |||||||    
T  46962919 taaaaccaatacgccagatatttgcagggaccatttccatatttaag 46962965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 14545974 - 14546149
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||  | |||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14545974 ttgattcatattggatttgatctttgtaatatgtagagtatttgattttagtccctcaaaatgagaactaaaatgaatattatagggaccaatttcaata 14546073  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| || |||||||||    
T  14546074 tgaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgcagggactaaaac 14546149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49121961 - 49121715
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  49121961 ttgattcatattggatttggtccttataatatgtagaatatttgattttagtccctcaaaatgaggactaaagtgaatattatagggaccaatttcaata 49121862  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    |||||| ||||||||| || |||||||||||| |||||||| |||| |||||||||||||||| |  ||||||||||        |||||||||| |  |    
T  49121861 tgaaataattttacaatgattaaaacaaaatatcaaggaccaaaactaaatattttatatttgcatggactaaaaccaaaaaaagtatttttataggggc 49121762  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| ||||| | || |||||||| ||||| |||| || |||||||    
T  49121761 taaaatcaaaatgccagatatttgcagggaccatttccatatttaag 49121715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 55092452 - 55092290
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  55092452 ttgattcatattggatttagtccttgtaatatatagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagagaccaatttcaata 55092353  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||| ||||||||    
T  55092352 tgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttg 55092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 7029630 - 7029454
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||| |||||||||| ||||||||||||||| |||||||||||    
T  7029630 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttaatttctcaaaatgaggactaaattgaatattatagggatcaatttcaata 7029531  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| |||||||||||||| | |||| |||||||||||| |||||||| || ||||||||||    
T  7029530 tgaaatgattttacaaggattaaaacaaaataccgaagaccaaaaccaaatattctatatttgcagggactaaaacc 7029454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 17109989 - 17110233
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |  | |||| ||||||||||||||||||||||| ||||||||||||||    
T  17109989 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagaccgtaaaaatgaggactaaaatgaatattatagagaccaatttcaata 17110088  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaa-accaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||| | |||||||||||||||| ||  || |||||||||| ||||||   || |||||||||         |||||||||| | |     
T  17110089 tgaaatgattttacaagaattaaaacaaaataccaaagattaagaccaaatattctatattcacag-gactaaaacacaaaaaaatatttttatatgtat 17110187  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||||| ||||||||||||||| |  |||| ||||||| ||||||    
T  17110188 taaaaccgaaacgtcatatatttacgaggaccattttcatatttaa 17110233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 17110020 - 17109851
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||  ||||||||    
T  17110020 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaac 17109921  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| ||| | ||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  17109920 c-aaaaaaatatttttacaaggattaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 17109851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 21323101 - 21323202
Alignment:
Q  77 atattataggga-ccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||   |||||||||||| |||||||| || ||||||||    
T  21323101 atattatagggatccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggattaaaaccaaatattctatatttgcagggactaaaa 21323200  T
Q  175 cc 176  Q
    ||    
T  21323201 cc 21323202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 29838432 - 29838291
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||| |        |||||||  | | |||||||||    
T  29838432 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgcagagactaaaa-cgaaaaaaatatttttgcagggactaaaacc 29838334  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtct 249  Q
    ||||  ||| |||||||| ||||||||||||| ||||||||||    
T  29838333 aaaatatcagatatttgcagggactattttcatatttaagtct 29838291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 251
Target Start/End: Original strand, 50645686 - 50645860
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||| || |||||||||    
T  50645686 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaac 50645785  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||||| | |||||||| |||| |||| |||||| | ||||||||||||| ||||||| ||||    
T  50645786 c-aaaaaaatatttttatagggactaaaactaaaatgtcagatatttacagggactattttcatatttaagccttt 50645860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 42093555 - 42093464
Alignment:
Q  86 ggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||| | |||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||    
T  42093555 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagagactaaaacc 42093464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 49500088 - 49500231
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |  ||||||||||        |||||||| | | |||||||||    
T  49500088 attttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaacc-aaaaaaatatttttacagggactaaaacc 49500186  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||  ||| |||||||| ||||||||||||| ||||||| ||||    
T  49500187 aaaatatcaaatatttgcagggactattttcatatttaagccttt 49500231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 889297 - 889212
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatattt 161  Q
    |||||||| ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  889297 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatattt 889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 32315513 - 32315376
Alignment:
Q  109 ttttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacca 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |  |||||||| |        |||||||| |   ||||||||||    
T  32315513 ttttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaatc-aaaaaaatatttttacagagactaaaacca 32315415  T
Q  208 aaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||| |||| |||||||| |||||||||||||||||||||    
T  32315414 aaatgtcagatatttgcagggactattttcacatttaag 32315376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 46962720 - 46962576
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||| || ||||||||||        | |||||| | | |||||||||    
T  46962720 attttacagggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaattt-tttttacagggactaaaacc 46962622  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtctttg 252  Q
    ||||  ||| |||||||| ||||||||||||| ||||||| |||||    
T  46962621 aaaatatcagatatttgcagggactattttcatatttaagcctttg 46962576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 14545974 - 14545835
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaa-tattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaac 205  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| || |||||||| |        || ||||| | | ||||||||    
T  14545974 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaatc-aaaaaaatacttttacatggactaaaac 14545876  T
Q  206 caaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| |||| ||||||||  ||||||||||||||||||||    
T  14545875 caaaatgtcagatatttgcaaggactattttcacatttaag 14545835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 52835759 - 52835857
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| || ||||||||    
T  52835759 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatacgaaggaccaaaaccaaattttttatatttgcagggactaaaa 52835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 889266 - 889317
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagt 52  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  889266 ttgattcatattggatttggtccttataatatgtagaatatttgattttagt 889317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 33162489 - 33162389
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||  ||||| || |||||||||    
T  33162489 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttttaatttgcagggactaaaac 33162390  T
Q  176 c 176  Q
    |    
T  33162389 c 33162389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 26582771 - 26582617
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnnt 185  Q
    |||||| | |||||||||   ||||||||||||||||||||||||| |||||||| ||||||||| || |||||||| || |||||| |||        |    
T  26582771 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcag-gactaacacc-aacaaaat 26582674  T
Q  186 atttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatt 242  Q
    ||||||| | | |||||||||||||  ||| |||||||| | |||||||||||||||    
T  26582673 atttttacagggactaaaaccaaaatatcagatatttgcggagactattttcacatt 26582617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 27285183 - 27285282
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||| ||||||| | |||||||||   ||||||||| ||||||||||||||| ||| |||| ||||||||  ||||||||||| || |||||||||    
T  27285183 atattataaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaatatcaatgaccaaaaccaaactttttatatttgcagggactaaaac 27285282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 27934696 - 27934839
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||||||||||||||| |||||||| |||||||| | |||||||||  || |||||||| |        ||||||||   | |||||||||    
T  27934696 attttacaaggactaaaacaaaataacaaggaccaaaaccaaaaaatttatatttacagggactaaaatc-aaaaaaatatttttactgggactaaaacc 27934794  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    | || |||| |||||||| ||||||||||||| ||||||| ||||    
T  27934795 agaatgtcagatatttgcagggactattttcatatttaagccttt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 55092452 - 55092590
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttata-agaactaaaac 205  Q
    ||||||||| || |||||||| |||||||||||| ||| ||||| ||||||||||| |||||||||||||        |||||||| | |||| ||||||    
T  55092452 attttacaatgattaaaacaatataccaaggaccaaaatcaaattttttatatttgcagagactaaaacc-aaaaaaatatttttacagagaa-taaaac 55092549  T
Q  206 caaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| |||| |||||||  ||||||||||||| |||||||    
T  55092550 caaaatgtcagatatttggagggactattttcatatttaag 55092590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39062635 - 39062695
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaa 61  Q
    |||||| |||||| ||| || | ||||||||||||||||||||||||||||||| ||||||    
T  39062635 ttgatttatattgaattcggtcattgtaatatgtagaatatttgattttagtcgttcaaaa 39062695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 38807752 - 38807921
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||| ||| |||||||| |||||||  ||||||||| |||||| ||||||||||| || |||||||||    
T  38807752 atattacaaggaccaaatccaatatgaatcaatttttcaaagactaaaataaaatacagaggaccaaaaccaaattttttatatttgcagggactaaaac 38807851  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||| ||||| |||| |||||| | |||||||||| || |||||||    
T  38807852 c-aaacatatatttttacagggactaaaatcaaaatgtcagatatttacagggactatttccatatttaag 38807921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 44937793 - 44937865
Alignment:
Q  64 aggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaa 136  Q
    ||||||||||||||||| | |  ||  ||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  44937793 aggactaaaatgaatatcacatagattaatttcaatatgaacagattttataaggactaaaataaaataccaa 44937865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 16056593 - 16056629
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  16056593 attttacaatgactaaaacaaaatatcaaggaccaaa 16056629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4525 - 4770
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  4525 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 4624  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||         |  |||||| | ||    
T  4625 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggactaaaaccaaaaaaaa-aaatttatagggac 4723  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||||| |||||||| ||||| |||| || |||||||    
T  4724 taaaaccaaaacgtcaaatatttgcagggaccatttccatatttaag 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 4556 - 4500
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaatac 133  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||    
T  4556 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatac 4500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 1e-72; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 10461483 - 10461733
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  10461483 ttgatttatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 10461582  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  10461583 tgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttatagggac 10461681  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||| ||||||| || |||||||| ||||| |||| || ||||||| ||||    
T  10461682 taaaatcaaaacgccagatatttgcagggaccatttccatatttaagccttt 10461733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24490981 - 24491157
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24490981 ttgattcatattggatttggtccttgtaatgtgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 24491080  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| || ||||||||||    
T  24491081 tgaaatgattttacaaggactaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaacc 24491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 5933263 - 5933513
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||    
T  5933263 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtcattcaaaatgaggactaaaatgaatattatagggaccgatttcaata 5933362  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || |||||||| |        |||||||||| ||||    
T  5933363 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa-caaaaaatatatttttataggaac 5933461  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||| ||||||||  | |||||| | ||||| ||||||| ||||||| ||||    
T  5933462 taaatccaaaacgctagatatttacagggaccattttcatatttaagccttt 5933513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 22394265 - 22394507
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  22394265 attcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggatcaagttcaatatga 22394364  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaa 202  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||||        |||||||||| |||||||    
T  22394365 aatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaacc-aaaaaaatatttttataggaactaa 22394463  T
Q  203 aaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    | ||||||||  | |||||| | ||||||||||||| |||||||    
T  22394464 atccaaaacgctagatatttaccgggactattttcatatttaag 22394507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14868918 - 14868742
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  14868918 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaataaatattatagggaccaatttcaata 14868819  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| || ||||||||||    
T  14868818 tgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagtgactaaaacc 14868742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18786119 - 18786362
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  18786119 ttgattcatattggatttggtccttgtaatatgtcgaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaattttaata 18786218  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||| | | ||    
T  18786219 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcag-gactaaaacc-aaaaaaatatttttacagggac 18786316  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||||||||||| || |||||||| ||||| |||| || ||||||    
T  18786317 taaaaccaaaacgccagatatttgcagggaccatttccatatttaa 18786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 6497434 - 6497263
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6497434 attcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatga 6497335  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||    
T  6497334 aatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6497263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3598658 - 3598413
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  3598658 ttgattcatattggatttgatccttgtaatacgtagaatatttgattttagtccctcaaaatgaggactaaaaagaatattatagggaccaatttcaata 3598559  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||| | | ||    
T  3598558 tgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttacagggac 3598460  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||||| |||| |||||||| ||||| ||||||| |||||||    
T  3598459 taaatccaaaatgtcagatatttgcagggaccattttcatatttaag 3598413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15969675 - 15969453
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||| |||||||||||||||    
T  15969675 ttgatttatattgaatttggtccttgtaatatgtagaatatttgattttagtccttccaaatgaggactaaaatgaatattataaggaccaatttcaata 15969576  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||        |||||||||| | ||    
T  15969575 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaacc-aaaaatatatttttatagggac 15969477  T
Q  200 taaaaccaaaacgtcatatatttg 223  Q
    ||||||||||||| || |||||||    
T  15969476 taaaaccaaaacgccaaatatttg 15969453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6542397 - 6542572
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||||||||||    
T  6542397 ttgatttatattggatttggtccttgtaatatgtagaatatttgattttagtccttcaaaatgaggattaaaatgaatattatagggaccaatttcaata 6542496  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||||||| |||||||| || |||||||||    
T  6542497 tgaaatgattttacaaggattaaaacaaaataccaaggactaaaaccaaatattctatatttgcagggactaaaac 6542572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29991347 - 29991185
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  29991347 ttgattcatattggaattggtccttgtagtatgtagaatatttgattttagtcccttaaaatgaggactaaaatgaatattatagggaccaatttcaata 29991248  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  29991247 tgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattttatatttg 29991185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 41137386 - 41137210
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||| |||||||||    
T  41137386 ttgattcatattggatttggttcttgtaatatgtagaatatttgattttagtcccccaaaatgaggactaaaatgaatattatagggaccgatttcaata 41137287  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| |  ||||||||||    
T  41137286 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaaggactaaaacc 41137210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4122715 - 4122891
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||||||| ||||||||||||    
T  4122715 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagaccctaaaaatgaggactaaaatgaatattataggggccaatttcaata 4122814  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||| |||| |||||||||||| |||||||| |||||||||||| |||||||  || ||||||||||    
T  4122815 tgaaatgattttactaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttacagggactaaaacc 4122891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 43197039 - 43197213
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| ||||||| | ||||||||| |||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||    
T  43197039 ttgattcatattcgatttggtctttgtaatatatagaatatttaattttagtccctcaaaatgaggactaaaataaatattatagggaccaattttaata 43197138  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||    
T  43197139 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 43197213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7133370 - 7133209
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||||||||    
T  7133370 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttactccctcaaaatgaggactaaaatgaatattatagggatcaatttcaata 7133271  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatattt 161  Q
    |||||||||||||||| || |||||||||||| |||||| | ||| |||||||| |||||||    
T  7133270 tgaaatgattttacaatgattaaaacaaaatatcaaggatcaaaatcaaatattctatattt 7133209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 40588811 - 40588961
Alignment:
Q  24 ttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaa 123  Q
    |||||||| ||||||||||| ||||||||| ||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| | |||    
T  40588811 ttgtaatacgtagaatattttattttagtccctcaaaatgaggactaaagtgaatattatagagaccaattttaatatgaaatgattttacaagaattaa 40588910  T
Q  124 aacaaaataccaaggaccaaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  40588911 aacaaaataccaaggatcaaaccaaatattttatatttgcagggactaaaa 40588961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 16416005 - 16416132
Alignment:
Q  3 gattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatg 102  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||  || | |||||  |||| ||||||||||||||||  || |||||| ||||||    
T  16416005 gatttatattggatttggtcattgtaataggtagaatatttgattttgatcccacaaaataaggattaaaatgaatattatatagatcaatttaaatatg 16416104  T
Q  103 aaatgattttacaaggactaaaacaaaa 130  Q
    ||  ||||||||||||||||||||||||    
T  16416105 aatagattttacaaggactaaaacaaaa 16416132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 40589481 - 40589564
Alignment:
Q  91 aatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  40589481 aattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatcaaaccaaatattttatatttgcagggactaaaa 40589564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 7133339 - 7133511
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| || |||||||||    
T  7133339 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaaaaaaataccaaggaccaaaaccaaaaattttatatttgcagggactaaaac 7133438  T
Q  176 cnnnnnnnntatttttat--aagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||||  || || |||||||||||  ||| |||||||| | |||||||||||||||||||    
T  7133439 caaaaaaaatatttttatacaaaaattaaaaccaaaatatcagatatttgcggagactattttcacatttaag 7133511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7586278 - 7586179
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacg-aggactaaaatgaatattatagggaccaatttcaat 99  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||  |  |||||||||||||||||||| |||| |||||||||    
T  7586278 ttgattcatattggatttggtccttgtaatatgtagaata-ttgattttagtctctcaaagtgtgggactaaaatgaatattataaggactaatttcaat 7586180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 3598658 - 3598796
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |  |||||||| || ||||||||||        |||||||| | | |||||||||    
T  3598658 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaacc-aaaaaaatatttttacagggactaaaacc 3598756  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| ||||||||  ||||||||||||||||||||    
T  3598757 aaaatgtcagatatttgcaaggactattttcacatttaag 3598796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 22394293 - 22394124
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | ||||||||| |  |||||||||||||||||||||||| || ||||| ||||||||| ||||||||||| || |||||||||    
T  22394293 atattacaaggaccaaatccaatatgaattacttttacaaggactaaaacaaaatatcagggaccaaaaccaaattttttatatttgcagggactaaaac 22394194  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||| ||||||| |||||||    
T  22394193 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaag 22394124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 245
Target Start/End: Original strand, 14868887 - 14869054
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| || |||||||||    
T  14868887 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaat-ttttatatttgcagggactaaaac 14868985  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    |        |||||||| |   ||||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  14868986 c-aaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 14869054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 246
Target Start/End: Complemental strand, 24491003 - 24490844
Alignment:
Q  86 ggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaaccnnnnnnnn 184  Q
    ||||||| | |||||||||   ||||||||||||||||||||||||||| | || |||| |||||| || |||||||| || ||||||||||            
T  24491003 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccgatgatcaaaaccaaattttctatatttgcagggactaaaaccaaaaaa-- 24490906  T
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||| | | ||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  24490905 tatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaag 24490844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 5933294 - 5933196
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||    
T  5933294 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaagaccaaaaccaaatattttatatttgcagggactaaaa 5933196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25329235 - 25329309
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatg 75  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  25329235 ttgattcatattggatttgatccttgtaatatgtaaaatatttaattttagtccctcaaaatgaggactaaaatg 25329309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 4122746 - 4122579
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||     
T  4122746 atattacaaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaat 4122647  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        | |||||| | | ||||||| ||||| |||| |||||||| ||||||||||||| |||||||    
T  4122646 c---aattttttttttacagggactaaaatcaaaatgtcaaatatttgcagggactattttcatatttaag 4122579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 6497406 - 6497575
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | ||||||||| | ||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||| ||  |||||||     
T  6497406 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggatcaaaaccaaattttttatatttgcaggaactaaaat 6497505  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||| ||||||| |||||||    
T  6497506 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaag 6497575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 18786150 - 18786050
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |  |||||||||    
T  18786150 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaac 18786051  T
Q  176 c 176  Q
    |    
T  18786050 c 18786050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 10461483 - 10461416
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||    
T  10461483 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 10461416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 25329235 - 25329098
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||| ||||| ||||||| ||| ||||| |||||||||||||| |||||||| |        |||||||| | ||||||||| |    
T  25329235 attttacaaggactaaaacataatacgaaggaccaaaatcaaattttttatatttgtagggactaaaa-caaaaaatatatttttacaggaactaaaatc 25329137  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||  ||| |||||||| ||||||||||||| ||||||    
T  25329136 aaaatatcagatatttgcggggactattttcatatttaa 25329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 29991325 - 29991414
Alignment:
Q  86 ggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||||||| |||||||||   ||||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||| ||||||||    
T  29991325 ggaccaattccaatatgaatcaattttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgtagggactaaaa 29991414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 15969644 - 15969742
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    |||||| | ||||||| |||||||| ||   |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||| || ||||||||    
T  15969644 atattacaaggaccaaattcaatataaatcaattttacaagaacttaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 15969742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 43197039 - 43196901
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||||||||||||| || ||||||| |||| |||| ||||||||||| || ||||||||||        |||||||| | | |||||||||    
T  43197039 attttacaaggactaaaacaaaacactaaggaccaaaactaaattttttatatttgcagggactaaaacc-aaaaaaatatttttacagggactaaaacc 43196941  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| |||||||   |||||||||||| |||||||    
T  43196940 aaaatgtcagatatttgtaaggactattttcatatttaag 43196901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 6542397 - 6542254
Alignment:
Q  108 attttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||| ||||||||||||| | ||| ||||| ||||||||||| || ||||||||||        |||||||| | | |||||||||    
T  6542397 attttacaaggactaaaataaaataccaaggatcaaaatcaaattttttatatttgcagggactaaaacc-aaaaaaatatttttacatggactaaaacc 6542299  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||  ||| |||||||| || || ||||||| ||||||| ||||    
T  6542298 aaaatatcagatatttgcgggaacaattttcatatttaagccttt 6542254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 24640648 - 24640688
Alignment:
Q  64 aggactaaaatgaatattatagggaccaatttcaatatgaa 104  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24640648 aggactaaaataaatattatagggaccaatttcaatatgaa 24640688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 38680505 - 38680580
Alignment:
Q  38 atatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgatttta 113  Q
    |||||||||||||||| ||||||   ||||||||||||| |||||||| || |||||| ||||||||  |||||||    
T  38680505 atatttgattttagtccctcaaattaaggactaaaatgattattatagtgatcaattttaatatgaatagatttta 38680580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 41137386 - 41137418
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggac 140  Q
    |||||||||||||||||||||||||||||||||    
T  41137386 attttacaaggactaaaacaaaataccaaggac 41137418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 5933173 - 5933125
Alignment:
Q  198 actaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||||| |||| |||||||| ||||| ||||||| |||||||    
T  5933173 actaaaaccaaaatgtcacatatttgcagggacaattttcatatttaag 5933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7877462 - 7877707
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||||||||  |||||||||||    
T  7877462 ttgattcatattggatttggtccttgtaatatgttgaatatttgattttagtccctcaaaatgaggactaaaataaatattatagggttcaatttcaata 7877561  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  7877562 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaaatatttttatagggac 7877661  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    || |||||||||| || |||||||| ||||| ||||||| ||||||    
T  7877662 tagaaccaaaacgccagatatttgcagggaccattttcatatttaa 7877707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 29683419 - 29683176
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  29683419 ttgatttatattggatttggtccttgtaatatgtaaaatatttgattttagtccctcaaaatgaggactaaaatgaatattataggg-ccaatttcaata 29683321  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaact 200  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| || | ||||||||        |||||||||| | |||    
T  29683320 tgaaatgattttacaaggattaaaacaaaataccaagggccaaaccaaatattctatatttgcaggggctaaaacc-aaaaaaatatttttatagggact 29683222  T
Q  201 aaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||| || |||||||| ||||| ||||||| |||||||    
T  29683221 aaaaccaaaacgccagatatttgcagggaccattttcatatttaag 29683176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14379251 - 14379496
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14379251 ttgattcatattggatttggtcattgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 14379350  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||| |||| |  ||||||||||        |||||||||| | ||    
T  14379351 tgaaatgattttacaaggattaaaacaaaataccaaggacaaaaaccaaatattctatttttgcaaggactaaaacc-aaaaaaatatttttatagggac 14379449  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||  | |||||||| ||||| |||| || |||||||    
T  14379450 taaaaccaaaacgcaagatatttgcagggaccatttccatatttaag 14379496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 17457859 - 17458032
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  17457859 attcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaataaggactaaaatgaatattatagggaccaatttcaatatga 17457958  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||    
T  17457959 aatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattttatatttgcagagattaaaacc 17458032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 41594089 - 41594334
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41594089 ttgatttatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaattttaata 41594188  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||||| || ||||||||||        |||||||| | | ||    
T  41594189 tgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattttatatttgcagggactaaaacc-aaaaaaatatttttacagggac 41594287  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||||||| |||| |||||||| ||||| |||| || |||||||    
T  41594288 taaaaccaaaatgtcagatatttgcagggaccatttccatatttaag 41594334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 19204836 - 19204592
Alignment:
Q  2 tgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatat 101  Q
    ||||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  19204836 tgattaatattgaatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactagaatgaatattatagggaccaatttcaatat 19204737  T
Q  102 gaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaact 200  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| || ||||||||||        |||||||||||| |||    
T  19204736 gaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttataaggact 19204638  T
Q  201 aaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||||||  | |||||||| ||||| |||| || |||||||    
T  19204637 aaaatcaaaacgctaaatatttgcagggaccatttccatatttaag 19204592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 12806794 - 12806619
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  12806794 ttgattcatattggatttggtcattgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 12806695  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| || |||||||||    
T  12806694 tgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaac 12806619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28921438 - 28921205
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||||||||    
T  28921438 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattataaagaccagtttcaata 28921339  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  28921338 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaacc--aaaaaatatttttatagggac 28921241  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattt 235  Q
    ||| |||||||| ||| |||||||| ||||| ||||    
T  28921240 taataccaaaacatcagatatttgcagggaccattt 28921205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 3371547 - 3371371
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3371547 ttgattcatattggatttggttcttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 3371448  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||  |||||||||    
T  3371447 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaggaactaaaacc 3371371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 13572716 - 13572467
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||| |    
T  13572716 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattataagaaccaatttcaaca 13572617  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||| || |||||||||         |||||||||| | ||    
T  13572616 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaacattctatatttgcagggactaaaac--aaaaaaatatttttatagggac 13572519  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||||| |||||| || |||||||| ||||| |||| || ||||||| ||||    
T  13572518 taaaactaaaacgccagatatttgcagggaccatttccatatttaagccttt 13572467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18369151 - 18369373
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||    
T  18369151 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaataaggactaaaatgaatattatagggaccaatctcaata 18369250  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||| ||| |||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  18369251 tgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc--aaaaaatatttttatagggac 18369348  T
Q  200 taaaaccaaaacgtcatatatttgc 224  Q
    ||||||||||||| || ||||||||    
T  18369349 taaaaccaaaacgccagatatttgc 18369373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 4171767 - 4171597
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4171767 attcatattggatttggtccttgtaatatgtagaatatttgattttagtctctcaaaatgaggactaaaatgaatattatagggaccaatttcaatatga 4171668  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaa 173  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||| || |||||||| || |||||||    
T  4171667 aatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatgttctatatttgcagggactaaa 4171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 6880114 - 6880356
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatga 103  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| || ||||||| ||||||||||||||||||||| |||||||||||||||| ||    
T  6880114 attcatattggatttggtccttataatatgtagaatatttgattttaatccctcaaaatgaggactaaaatgaatattatggggaccaatttcaatacga 6880213  T
Q  104 aatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaa 202  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||        |||||||||||| |||||    
T  6880214 aatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaacc-aaaaaaatatttttataaggactaa 6880312  T
Q  203 aaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    | |||||||| || ||||||   |||||||||| || |||||||    
T  6880313 atccaaaacgccagatatttatagggactatttccatatttaag 6880356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 30432733 - 30432983
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||||||||    
T  30432733 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattataagcaccaatttcaata 30432832  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| |||||||||||| ||| |||| |||||||| ||| |||||||| || ||||||||||        |||||||| | | ||    
T  30432833 tgaaatgattttacaaggattaaaacaaaataacaaagaccaaaaccaaaaattctatatttgcagggactaaaacc-aaaaaaatatttttacagggac 30432931  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||| |||| |||||||| ||||| |||| || ||||||| ||||    
T  30432932 taaaaccaaaatgtcagatatttgccgggaccatttccatatttaagccttt 30432983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2395402 - 2395157
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| || |||||||||||    
T  2395402 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgagggctaaaatgaatattatagagatcaatttcaata 2395303  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggac-caaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  2395302 tgaaatgattttacaaggactaaaataaaataccaaggactaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttatagggac 2395204  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||| ||||||| || |||||||| | ||| |||| || |||||||    
T  2395203 taaaatcaaaacgccagatatttgcagtgaccatttccatatttaag 2395157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42705197 - 42705054
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  42705197 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattatagggaccaatttcaata 42705098  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  42705097 tgaaatgattttacaaggattaaaacaaaatacgaaggaccaaa 42705054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 38873710 - 38873474
Alignment:
Q  8 atattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatg 107  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38873710 atattggatttggtccttgtaatatctagaatatttgattttagtcccttaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatg 38873611  T
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||| |||||||| |  ||||||||||        | |||||||| | |||||||||    
T  38873610 attttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaacc---aaatttttttttatagggactaaaacc 38873514  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    ||||||| | |||||||  ||||| |||| || |||||||    
T  38873513 aaaacgttagatatttggagggaccatttccatatttaag 38873474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6164036 - 6164212
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||    
T  6164036 ttgattcatattgaatttggttcttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattataaggactaatttcaata 6164135  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||  | ||||||||||    
T  6164136 tgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgctgggactaaaacc 6164212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 32521720 - 32521498
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||| |||| | ||||||| ||| |||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||    
T  32521720 ttgattcatattgaatttagtccttgtagtatatagaatatttgattttagtccctcaaaatgaagactaaaatgaatattataaggaccaatttcaata 32521621  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    |||||||||||||||| || |||||||||||||||| |||| ||||||||||||||||||||  |  ||||||||||        |||||||| ||| ||    
T  32521620 tgaaatgattttacaaagattaaaacaaaataccaaagaccaaaaccaaatattttatatttacaaggactaaaaccaaaaaaaatatttttagaaggac 32521521  T
Q  200 taaaaccaaaacgtcatatattt 222  Q
    |||||||||||||||||||||||    
T  32521520 taaaaccaaaacgtcatatattt 32521498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10748632 - 10748793
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||| ||||||||||||||    
T  10748632 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagttcatcaaaatgaggactaaaatgaatattatagagaccaatttcaata 10748731  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatattt 161  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||    
T  10748732 tgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatattt 10748793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3948502 - 3948678
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||||  ||||||||||||||    
T  3948502 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagaccctaaaaatgaggactaaaatgaatattataatgaccaatttcaata 3948601  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||| ||||||||||||  ||||||| |||||||||||| |||||||| || ||||||||||    
T  3948602 tgaaatgattttacaaggattaaaacaaaatataaaggaccaaaaccaaatattctatatttgcagggactaaaacc 3948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 37609094 - 37609338
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  37609094 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattata-ggaccaatttcaata 37609192  T
Q  101 tgaaatgattttacaaggact-aaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaa 198  Q
    |||||| |||||||||||| | ||||| ||| |||||||||| |||||||||||| |||||||| || ||||||||||        |||||||| | | |    
T  37609193 tgaaat-attttacaaggattaaaaactaaaaaccaaggaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttagaggga 37609290  T
Q  199 ctaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||| || ||||||||  |||| |||| || |||||||    
T  37609291 ctaaaaccaaaacgccagatatttgcaaggaccatttccatatttaag 37609338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 33940822 - 33940991
Alignment:
Q  8 atattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatg 107  Q
    |||||| |||||| |||| || |||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  33940822 atattgaatttggtccttttagtatgtagaatatttgattttagtccctcaaaataaagactaaaatgaatattatagggaccaatttcaatatgaaatg 33940921  T
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||| ||||| |||||||||||| ||| |||| |||||||||||| |||||||| || ||||||||||    
T  33940922 attttataaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaacc 33940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 30771246 - 30771151
Alignment:
Q  68 ctaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||    
T  30771246 ctaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttg 30771151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 25318518 - 25318606
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||    
T  25318518 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgtagagactaaaa 25318606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 251
Target Start/End: Complemental strand, 7877493 - 7877318
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  7877493 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 7877394  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||| | |||||| || ||||| ||   |||||||| ||||||||||||| ||||||||||||    
T  7877393 caaaaaaaatatttttacaggaactacaatcaaaatgtatgatatttgcagggactattttcatatttaagtcttt 7877318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 18369182 - 18369003
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| || |||||||||    
T  18369182 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaac 18369083  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtctttgttga 256  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| ||||||| |||| ||||    
T  18369082 c-caaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaagccttttttga 18369003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 28921407 - 28921586
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  28921407 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaac 28921506  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtctttgttga 256  Q
    |        |||||||| | | | ||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| ||||    
T  28921507 c-aaaaaaatatttttacagggattaaaaccaaaatgtcatatatttgcagggactattttcatatttaagccttttttga 28921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 77 - 249
Target Start/End: Complemental strand, 3948533 - 3948361
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  3948533 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttgcagggactaaaac 3948434  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtct 249  Q
    |        |||||||||| | |||||||  |||| ||||  |||||||  |||||||||||| ||||||||||    
T  3948433 c-aaaaaaatatttttatagggactaaaattaaaatgtcaggtatttgcatggactattttcatatttaagtct 3948361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 29683419 - 29683557
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||        |||||||| | | ||||||| |    
T  29683419 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc-aaaaaaatatttttacagggactaaaatc 29683517  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| |||||||| |||||||||| || |||||||    
T  29683518 aaaatgtcagatatttgcagggactatttccatatttaag 29683557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 245
Target Start/End: Original strand, 4171739 - 4171907
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | ||||||||| | |||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||  | |||||||||    
T  4171739 atattacaaggaccaaatccaatatgaattaattttacaaggattaaaacaaattaccaaggaccaaaaccaaattttttatatttgctgggactaaaac 4171838  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    |        ||||||||     ||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  4171839 c-aaaaaaatatttttaccgagactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 4171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 12806773 - 12806937
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnnt 185  Q
    |||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||        |    
T  12806773 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaacc-aaaaaaat 12806871  T
Q  186 atttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||||||   | ||||||||||||| || | |||||||| ||||| ||||||| ||||||| ||||    
T  12806872 atttttacggggactaaaaccaaaatgttagatatttgcagggacaattttcatatttaagccttt 12806937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 10748663 - 10748494
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| || || ||||||    
T  10748663 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaagtaccaaggaccaaaaccaaattttttatatttgcagggattaaaac 10748564  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| || ||||| | ||||||||||| |||||||    
T  10748563 c-aaaaaaatatttttacagggactaaaaccaaaatgtcagatgtttgcagagactattttcatatttaag 10748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 6880142 - 6880042
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||| ||||||| | |||||||||   |||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||| || |||||||||    
T  6880142 atattataaggaccaaatccaatatgaataaattttacatggactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 6880043  T
Q  176 c 176  Q
    |    
T  6880042 c 6880042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 249
Target Start/End: Original strand, 42705166 - 42705338
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||||| || ||||||||| ||||||||||| |  |||||||||    
T  42705166 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggtccaaaaccaaattttttatatttgcactgactaaaac 42705265  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtct 249  Q
    |        |||||||| |   |||||| |||||| |||| |||||||| ||||||||||||| ||||||||||    
T  42705266 c-aaaaaaatatttttacagagactaaatccaaaatgtcagatatttgcagggactattttcatatttaagtct 42705338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 6164056 - 6163969
Alignment:
Q  88 accaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaa 174  Q
    ||||| |||||||||||   |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |||||| ||||    
T  6164056 accaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaactaaattttttatatttgcagagacaaaaa 6163969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 2395371 - 2395540
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||| |||||||||| |||||||| ||| ||||| ||||||||||| || || |||||     
T  2395371 atattacaaggaccaaatccaatatgaatcaattttacaaggacttaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggattaaaa- 2395469  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  2395470 caaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 2395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 14379272 - 14379114
Alignment:
Q  87 gaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnnt 185  Q
    |||||| | |||||||||   ||||||||||||||||| |||||||| ||||||| ||||||||| ||||| ||||| || ||||||||||        |    
T  14379272 gaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaacc-aaaaaaat 14379174  T
Q  186 atttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||||| | | ||||||||||||| |||| ||||||||  |||||||||||| ||||||    
T  14379173 atttttacagggactaaaaccaaaatgtcagatatttgcaaggactattttcatatttaa 14379114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 17457887 - 17457718
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | ||||||||| | ||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||| ||  |||||||     
T  17457887 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggaccaaaacctaattttttatatttgcaggaactaaaa- 17457789  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
             | |||||| | |||||||||||||||  ||| |||||||| ||||||||||| |||||||||    
T  17457788 taaattttttttttttacaggaactaaaaccaaaatttcaaatatttgcagggactatttttacatttaag 17457718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 30432764 - 30432596
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| |||| | |||  || ||||||||     
T  30432764 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaat-ttttgtttttacagggactaaaat 30432666  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        || ||||| | | ||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  30432665 c-aaaaaaatacttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaag 30432596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 3371547 - 3371615
Alignment:
Q  108 attttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| || |||||||||    
T  3371547 attttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaac 3371615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 19204838 - 19204981
Alignment:
Q  109 ttttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacca 207  Q
    ||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||          |||||||| ||| ||||||||||    
T  19204838 ttttacaagtattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaaatatttttacaaggactaaaacca 19204937  T
Q  208 aaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||| | |  |||||| | ||||||||||||| ||||||| ||||    
T  19204938 aaatgacggatatttacagggactattttcatatttaagccttt 19204981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 37609125 - 37609039
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttg 162  Q
    |||||| | ||||||| | |||||||||   ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  37609125 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaaccaaattttttatatttg 37609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 41594089 - 41593952
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||| || |||||||| ||  |||||||||        |||||||| | | |||||||||    
T  41594089 attttacaaagactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaacc-aaaaaaatatttttacagggactaaaacc 41593991  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    ||||  ||| |||||||| || |||||||||||||||||    
T  41593990 aaaatatcagatatttgcaggaactattttcacatttaa 41593952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25318454 - 25318506
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtc 53  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  25318454 ttgattcatattgaatttggtccttgtaatatgtaaaatatttgattttagtc 25318506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 33940819 - 33940681
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| ||  ||||||| |        |||||||| | | ||||||| |    
T  33940819 attttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaa-ctaaaaaaatatttttacagggactaaaatc 33940721  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| || | |||||||| ||||||||||||| |||||||    
T  33940720 aaaatgtaagatatttgcagggactattttcatatttaag 33940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 32521706 - 32521788
Alignment:
Q  94 ttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||||||   ||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| || || ||||||    
T  32521706 ttcaatatgaatcaattttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggattaaaac 32521788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 25318485 - 25318385
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| |||||||||||   |||||| |||||| ||||||||||| |||||||| ||||||| | |||||||||||  || ||||||||    
T  25318485 atattacaaggaccaaattcaatatgaatcaattttataaggacaaaaacaaaatatcaaggaccaaaaccaatttttttatatttgctgaaactaaaac 25318386  T
Q  176 c 176  Q
    |    
T  25318385 c 25318385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 31420769 - 31420863
Alignment:
Q  4 attcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaa 98  Q
    |||||||||||| || | |||||||| ||||| |||||||||||  |||| |||||||  || |||||||||||| ||| || |||| |||||||    
T  31420769 attcatattggaattagtccttgtaacatgtaaaatatttgattacagtccctcaaaataagaactaaaatgaattttaaagagaccgatttcaa 31420863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 245
Target Start/End: Original strand, 13572685 - 13572853
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaag-gaccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||| |||| ||| | | ||| ||||| |||||||||||  | |||||||||    
T  13572685 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatatacaaagtgccaaaatcaaattttttatatttgctgggactaaaac 13572784  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaa 245  Q
    |        |||||||| | | | ||||||||||| |||||||||||||  | |||||||||| ||||||    
T  13572785 c-aaaaaaatatttttacagggattaaaaccaaaatgtcatatatttgcaagaactattttcatatttaa 13572853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 29417690 - 29417654
Alignment:
Q  24 ttgtaatatgtagaatatttgattttagtcgctcaaa 60  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29417690 ttgtaatatgtagaatatttgattttagtccctcaaa 29417654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 7834315 - 7834209
Alignment:
Q  8 atattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatg 107  Q
    |||||| |||||| |||| |||| |||| ||||||||||||||||| | || ||  || |||||||| ||||||||||   |||| || ||||||| |||    
T  7834315 atattgaatttggtccttataatttgtaaaatatttgattttagtc-cccacaataagaactaaaataaatattatagcatccaaatttaatatgagatg 7834217  T
Q  108 attttaca 115  Q
    ||||||||    
T  7834216 attttaca 7834209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 11295721 - 11295642
Alignment:
Q  68 ctaaaatgaatattatagggaccaatttcaatatgaaatgattttacaagga---ctaaaacaaaataccaaggaccaaa 144  Q
    ||||||| |||||||||| ||| ||||||||||||||   ||||| ||||||   ||||||||||| | |||||||||||    
T  11295721 ctaaaataaatattatagagacgaatttcaatatgaacaaattttgcaaggacttctaaaacaaaacatcaaggaccaaa 11295642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 35510901 - 35510974
Alignment:
Q  76 aatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaaccaaa 149  Q
    ||||||||||| | |||||| ||||||||  ||||||||| |||||| ||||||| || ||||| |||| ||||    
T  35510901 aatattataggaatcaattttaatatgaatagattttacatggactagaacaaaacactaaggatcaaaacaaa 35510974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 4726070 - 4726010
Alignment:
Q  68 ctaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaa 128  Q
    ||||||||||| ||| ||||||  |||||||||  | ||||||||||||||| ||||||||    
T  4726070 ctaaaatgaatgttacagggactgatttcaatacaatatgattttacaaggattaaaacaa 4726010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 212550 - 212795
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||    
T  212550 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattataggaaccaatttcaata 212649  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||| || |||| |||||||||||| |||||||| || ||||||||||        |||||||||| | ||    
T  212650 tgaaatgattttacaaggattaaaacaaaatacgaaagaccaaaaccaaatattctatatttgcagggactaaaacc-aaaaaaatatttttatagggac 212748  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||| ||| |||||| | ||||| |||| || |||||||    
T  212749 taaaaccaaaacatcagatatttacggggaccatttccatatttaag 212795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 212581 - 212412
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||  ||||  ||||| || |||| ||||    
T  212581 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttaatttgcagggacttaaac 212482  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |        |||||||| | | ||||||||||||| |||  |||||||| ||||||||||||| |||||||    
T  212481 c-aaaaaaatatttttacagggactaaaaccaaaatgtctgatatttgcggggactattttcatatttaag 212412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 36132 - 36381
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  36132 ttgattcatattggattcggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattataaggaccaattttaata 36231  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| ||  ||||||||         || ||||||| | ||    
T  36232 tgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcaggaactaaaac--aaaaaaataattttatagggac 36329  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |||||| ||||||||| |||||||| ||||||||||| | ||||||| ||||    
T  36330 taaaactaaaacgtcagatatttgcagggactatttttatatttaagccttt 36381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 36132 - 36063
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||| |  ||||||||||    
T  36132 attttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgcaaggactaaaacc 36063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 4227 - 3978
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    ||||||||||| |||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4227 ttgattcatataggatttgctccttttaatatgtagaatatttgattttagtc-ctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 4129  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||  || ||||||||||        |||||||||| | ||    
T  4128 tgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttctatatttacagggactaaaacc-aaaaaaatatttttatagggac 4030  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    ||||||||||||| || |||||||| ||||| |||| || ||||||| ||||    
T  4029 taaaaccaaaacgccagatatttgcagggaccatttccatatttaagccttt 3978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 4227 - 4365
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaactaaaacc 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||        |||||||| | | |||||||||    
T  4227 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc-aaaaaaatatttttacagggactaaaacc 4325  T
Q  207 aaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||| |||| |||||||| ||||||||||||| |||||||    
T  4326 aaaatgtcagatatttgcagggactattttcatatttaag 4365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43415 - 43592
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattata-gggaccaatttcaat 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  43415 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggactaaaatgaatattataggggaccaatttcaat 43514  T
Q  100 atgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| || ||||||||||    
T  43515 atgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaacc 43592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 251
Target Start/End: Complemental strand, 43446 - 43272
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||     
T  43446 atattacaaggaccaaatccaatatgaatcaattttacaagtactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa- 43348  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtcttt 251  Q
    |        |||||||| | | ||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||    
T  43347 caaaaaatatatttttacagggactaaaaccaaaatgtcaaatatttgcagggactattttcacatttaagccttt 43272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36903 - 37046
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36903 ttgattcatattggatttggtccttgtaatatgtagaatatttgattttagtccctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 37002  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggaccaaa 144  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  37003 tgaaataattttacaaggattaaaacaaaataccaaggaccaaa 37046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 36934 - 36767
Alignment:
Q  77 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  36934 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 36835  T
Q  176 cnnnnnnnntatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |         || |||  | | ||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  36834 caaaaaa---atattttcagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaag 36767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 8680 - 8855
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  8680 ttgattcatattggatttagtccttgtaatatgtagaatatttgattttagtccctcaaaatgaggattaaaatgaatattttagggaccaatttcaata 8779  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaac 175  Q
    |||||||||||||||| || ||||||||||||||||||| | |||||||||||| |||||||| || |||||||||    
T  8780 tgaaatgattttacaaagattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaac 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 8680 - 8611
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||    
T  8680 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 8611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 25356 - 25113
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||            ||||||||||||| |||||||||||||    
T  25356 ttgattcatattggatttgatccttgtaatatgtagaatatttgattttagtccctcaaaa------------tgaatattataggaaccaatttcaata 25269  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaaccnnnnnnnntatttttataagaac 199  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||  || ||||||||||        |||||||||| | ||    
T  25268 tgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaaccaaatattctatatttacagggactaaaacc-aaaaaaatatttttatagggac 25170  T
Q  200 taaaaccaaaacgtcatatatttgctgggactattttcacatttaagtctttgttga 256  Q
    |||||||||||||||| ||||||  |||||| ||||||| ||||||| |||||||||    
T  25169 taaaaccaaaacgtcaaatatttattgggaccattttcatatttaagcctttgttga 25113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 25356 - 25425
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||  ||||| || ||||||||||    
T  25356 attttacaaggactaaaataaaataccaaggaccaaaaccaaaaatttttaatttgcagggactaaaacc 25425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 25471 - 25519
Alignment:
Q  198 actaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||||  ||| |||||||| ||||||||||||| |||||||    
T  25471 actaaaaccaaaatatcagatatttgcggggactattttcatatttaag 25519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 74159 - 74005
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||||||||||| ||||||||| ||||||| |||| ||||||||| |||| ||||| |||||||||||||||||||||||||| ||| ||||    
T  74159 ttgattcatattggatttggtccttgtaat-tgtagaaaatttaattttagtccctcataacgatgactaaaatgaatattatagggaccagttttaata 74061  T
Q  101 tgaaatgattttacaaggactaaaacaaaataccaaggacc-aaaccaaatatttt 155  Q
    ||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||    
T  74060 tgaaatgattttataaggattaaaacaaaatacgaaggaccaaaaccaaatatttt 74005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 74137 - 74228
Alignment:
Q  86 ggaccaatttcaatatgaaatgattttacaaggactaaaacaaaataccaaggaccaaa-ccaaatattttatatttgtagagactaaaacc 176  Q
    ||||||| | |||||||||   ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||||||||    
T  74137 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaagccaaattttttatatttgcagggactaaaacc 74228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 118258 - 118098
Alignment:
Q  15 atttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttac 114  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  118258 atttggtccttgtaatatgtagaatatttgattt-agtccctcaaaatgaggactaaaataaatattatagggaccaatttcaatatgaaatgactttac 118160  T
Q  115 aaggactaaaacaaaataccaagga-ccaaaccaaatattttatatttgtagagactaaaacc 176  Q
     |||| ||||||||||||| ||||| | |||  ||||||| |||||||| || ||||||||||    
T  118159 -aggattaaaacaaaatacaaaggatcaaaattaaatattctatatttgcagggactaaaacc 118098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 118277 - 118346
Alignment:
Q  108 attttacaaggactaaaacaaaataccaaggacc-aaaccaaatattttatatttgtagagactaaaacc 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||    
T  118277 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaacc 118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11209 - 11315
Alignment:
Q  1 ttgattcatattggatttggaccttgtaatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaata 100  Q
    |||||||||||| |||||   |||||||||||||||||||||| |||||| || |||||||  | ||||||||| ||||||  || ||||| ||||||||    
T  11209 ttgattcatattagatttaatccttgtaatatgtagaatatttaattttaatccctcaaaataaagactaaaataaatatttgagagaccactttcaata 11308  T
Q  101 tgaaatg 107  Q
    | |||||    
T  11309 taaaatg 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 11360 - 11299
Alignment:
Q  64 aggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaa 125  Q
    ||||||||||| |||||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  11360 aggactaaaataaatattgtagagaccaatttcgatatgaaatgatttcacaaggactaaaa 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 10906 - 10808
Alignment:
Q  27 taatatgtagaatatttgattttagtcgctcaaaacgaggactaaaatgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaac 126  Q
    |||||| |||||||||| |||||| |||||||||   |||||| |||| |||| | ||  |||||||||| |||||||||||||| |||| |||||||||    
T  10906 taatatatagaatatttaattttaatcgctcaaata-aggactcaaataaatactgtatagaccaatttcgatatgaaatgatttcacaaagactaaaac 10808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 43971 - 43910
Alignment:
Q  185 tatttttataagaactaaaaccaaaacgtcatatatttgctgggactattttcacatttaag 246  Q
    |||||||||||| ||||||||||||||| || |||||||| |||||||||| || |||||||    
T  43971 tatttttataaggactaaaaccaaaacgacagatatttgccgggactatttccatatttaag 43910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 44003 - 44053
Alignment:
Q  198 actaaaaccaaaacgtcatatatttgctgggactattttcacatttaagtc 248  Q
    ||||||||||||| |||| |||||||| ||||||||||| | |||||||||    
T  44003 actaaaaccaaaatgtcaaatatttgcagggactatttttatatttaagtc 44053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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