View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21409_high_1 (Length: 437)

Name: NF21409_high_1
Description: NF21409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21409_high_1
NF21409_high_1
[»] chr4 (26 HSPs)
chr4 (79-421)||(37859128-37859470)
chr4 (193-325)||(52673782-52673914)
chr4 (204-287)||(22318378-22318461)
chr4 (193-300)||(43739457-43739564)
chr4 (198-296)||(21098534-21098632)
chr4 (223-299)||(45577705-45577781)
chr4 (193-277)||(50729525-50729609)
chr4 (198-297)||(12600885-12600984)
chr4 (198-297)||(39078660-39078759)
chr4 (198-288)||(3649644-3649734)
chr4 (195-297)||(47642476-47642578)
chr4 (198-288)||(50727901-50727991)
chr4 (198-288)||(50735915-50736005)
chr4 (18-55)||(37859041-37859078)
chr4 (198-298)||(20694369-20694469)
chr4 (198-297)||(4325790-4325889)
chr4 (198-297)||(33177020-33177119)
chr4 (193-288)||(38486240-38486335)
chr4 (198-297)||(44649152-44649251)
chr4 (198-297)||(52949719-52949818)
chr4 (195-245)||(16320570-16320620)
chr4 (198-288)||(23521888-23521978)
chr4 (227-289)||(40792424-40792486)
chr4 (168-245)||(37695499-37695576)
chr4 (289-325)||(10184885-10184921)
chr4 (198-286)||(38812530-38812618)
[»] chr3 (20 HSPs)
chr3 (193-320)||(14155445-14155573)
chr3 (198-277)||(19906779-19906858)
chr3 (198-297)||(39052827-39052926)
chr3 (198-277)||(50678815-50678894)
chr3 (199-290)||(26106621-26106712)
chr3 (198-297)||(51296578-51296677)
chr3 (198-288)||(21221349-21221439)
chr3 (198-288)||(40094509-40094599)
chr3 (198-295)||(3964287-3964384)
chr3 (193-297)||(3867633-3867737)
chr3 (224-295)||(3864690-3864761)
chr3 (198-297)||(38213351-38213450)
chr3 (198-288)||(28675796-28675886)
chr3 (198-288)||(29584881-29584971)
chr3 (193-287)||(32768599-32768693)
chr3 (198-288)||(42636392-42636482)
chr3 (193-290)||(8648541-8648638)
chr3 (224-297)||(34351383-34351456)
chr3 (224-288)||(1344722-1344786)
chr3 (193-245)||(49748895-49748947)
[»] chr5 (18 HSPs)
chr5 (192-300)||(8222754-8222863)
chr5 (198-297)||(41790463-41790562)
chr5 (198-288)||(553402-553492)
chr5 (198-277)||(22432310-22432389)
chr5 (198-297)||(39918503-39918602)
chr5 (198-295)||(8560983-8561080)
chr5 (198-297)||(39788188-39788288)
chr5 (198-297)||(3735353-3735452)
chr5 (193-288)||(28090516-28090611)
chr5 (198-288)||(2351685-2351775)
chr5 (198-288)||(18470429-18470519)
chr5 (198-288)||(31770592-31770682)
chr5 (198-288)||(32528720-32528810)
chr5 (198-288)||(35701282-35701372)
chr5 (224-277)||(5571671-5571724)
chr5 (198-279)||(8136851-8136932)
chr5 (193-289)||(1338624-1338720)
chr5 (224-288)||(23091331-23091395)
[»] chr6 (11 HSPs)
chr6 (198-297)||(10324145-10324244)
chr6 (198-297)||(9902692-9902791)
chr6 (198-297)||(10959996-10960095)
chr6 (198-288)||(3932841-3932931)
chr6 (224-288)||(11382069-11382133)
chr6 (193-277)||(18597187-18597271)
chr6 (198-277)||(11279144-11279223)
chr6 (198-288)||(24203367-24203457)
chr6 (195-288)||(17867840-17867933)
chr6 (195-288)||(17877623-17877716)
chr6 (198-298)||(4494149-4494249)
[»] chr2 (21 HSPs)
chr2 (167-298)||(41366074-41366205)
chr2 (198-289)||(18126983-18127074)
chr2 (198-297)||(41934577-41934676)
chr2 (195-277)||(6896184-6896266)
chr2 (198-288)||(18685841-18685931)
chr2 (198-288)||(37003863-37003953)
chr2 (198-288)||(7258901-7258992)
chr2 (198-288)||(7761568-7761658)
chr2 (198-288)||(16104279-16104369)
chr2 (198-288)||(33889248-33889338)
chr2 (198-288)||(44284634-44284724)
chr2 (224-277)||(3913481-3913534)
chr2 (193-242)||(40876614-40876663)
chr2 (224-297)||(42365573-42365646)
chr2 (224-288)||(2086077-2086141)
chr2 (198-246)||(8112347-8112395)
chr2 (193-297)||(12939290-12939394)
chr2 (224-276)||(16177904-16177956)
chr2 (224-300)||(26418916-26418992)
chr2 (224-288)||(32497920-32497984)
chr2 (195-266)||(38786523-38786592)
[»] chr8 (19 HSPs)
chr8 (206-316)||(22756429-22756539)
chr8 (224-300)||(14005080-14005156)
chr8 (198-297)||(10656696-10656795)
chr8 (193-288)||(7394819-7394914)
chr8 (198-288)||(6386581-6386671)
chr8 (198-245)||(15001514-15001561)
chr8 (198-277)||(29611065-29611144)
chr8 (198-297)||(30543032-30543131)
chr8 (198-277)||(32020011-32020090)
chr8 (198-245)||(40389088-40389135)
chr8 (198-288)||(8673065-8673155)
chr8 (223-297)||(14958955-14959028)
chr8 (198-288)||(21272689-21272779)
chr8 (223-292)||(27393289-27393356)
chr8 (198-288)||(32303595-32303685)
chr8 (198-300)||(37618402-37618504)
chr8 (193-294)||(10932735-10932835)
chr8 (224-297)||(12753361-12753434)
chr8 (223-296)||(36426282-36426355)
[»] chr1 (26 HSPs)
chr1 (198-288)||(6029371-6029461)
chr1 (198-288)||(50382473-50382563)
chr1 (198-295)||(13994145-13994242)
chr1 (213-295)||(2761641-2761723)
chr1 (224-300)||(5109731-5109806)
chr1 (224-288)||(17887962-17888026)
chr1 (191-279)||(39792830-39792918)
chr1 (224-300)||(41967945-41968021)
chr1 (198-297)||(15539960-15540059)
chr1 (228-267)||(28437680-28437719)
chr1 (193-288)||(41972925-41973020)
chr1 (193-288)||(45490940-45491035)
chr1 (193-300)||(570388-570497)
chr1 (198-288)||(16451141-16451231)
chr1 (198-288)||(28340373-28340463)
chr1 (193-243)||(34283881-34283931)
chr1 (198-288)||(42510539-42510629)
chr1 (198-288)||(51264509-51264599)
chr1 (198-287)||(1351505-1351594)
chr1 (224-297)||(1601178-1601251)
chr1 (198-287)||(6144056-6144145)
chr1 (195-300)||(16476222-16476327)
chr1 (224-297)||(50540349-50540422)
chr1 (193-277)||(26733580-26733664)
chr1 (191-243)||(43310335-43310387)
chr1 (251-295)||(49303477-49303521)
[»] chr7 (15 HSPs)
chr7 (198-297)||(48699398-48699497)
chr7 (224-297)||(30599030-30599103)
chr7 (198-297)||(329470-329569)
chr7 (198-277)||(21133392-21133471)
chr7 (198-297)||(21784871-21784970)
chr7 (198-297)||(44748695-44748794)
chr7 (198-288)||(1870144-1870234)
chr7 (198-276)||(23349287-23349365)
chr7 (198-288)||(46633706-46633796)
chr7 (198-267)||(29372775-29372844)
chr7 (193-297)||(17237076-17237180)
chr7 (224-288)||(32873791-32873855)
chr7 (191-267)||(34117482-34117558)
chr7 (224-288)||(43158708-43158772)
chr7 (193-297)||(48445521-48445625)
[»] scaffold0650 (1 HSPs)
scaffold0650 (198-277)||(1644-1723)
[»] scaffold0027 (1 HSPs)
scaffold0027 (224-277)||(15188-15241)
[»] scaffold0050 (1 HSPs)
scaffold0050 (198-277)||(42951-43029)
[»] scaffold0169 (2 HSPs)
scaffold0169 (198-288)||(12537-12627)
scaffold0169 (198-288)||(18055-18145)
[»] scaffold0004 (1 HSPs)
scaffold0004 (191-288)||(372958-373055)
[»] scaffold0360 (1 HSPs)
scaffold0360 (193-277)||(15377-15461)
[»] scaffold0014 (1 HSPs)
scaffold0014 (193-297)||(101945-102049)


Alignment Details
Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 79 - 421
Target Start/End: Original strand, 37859128 - 37859470
Alignment:
Q  79 tgaagcacataatatacaactagttgtatggtgttgttgattgtaaattgttctagggacatgactttgattgtaaaattgttttgaagacatgacaaat 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  37859128 tgaagcacataatatacaactagttgtatggtgttgttgattgtaaattgttctagggacatgactttgattgtaaaattgttttgcggacatgataaat 37859227  T
Q  179 tggggataagaaatatgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataa 278  Q
    ||||||||||||| |||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||    
T  37859228 tggggataagaaacatgacaaaaactaaaaattttatctctcaataaaccataacacaactttttgtctcaaatacaacttgtctaaaacactaaaataa 37859327  T
Q  279 ctttttgtccacaaaaaattgttcaatacaatacaagtttgtcatgtattagaaggggactatgtccgattcacattggaccacaatagtcttgtcattg 378  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37859328 ttttttgtccacaaaaaattgttcaatacaatacaagtttgtcatgtatcggaaggggactatgtccgattcacattggaccacaatagtcttgtcattg 37859427  T
Q  379 gctccttctagcatgccccaactgacaaacacctgatgatatt 421  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  37859428 gctccttctagtatgccccaactgacaaacaccagatgatatt 37859470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 193 - 325
Target Start/End: Complemental strand, 52673914 - 52673782
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| |||||| ||||||||| || |||| |||||| |||||||| ||||||| | | |||  | || ||||||| || ||||||| ||||||||||| |    
T  52673914 atgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaaataaatttttgtccacca 52673815  T
Q  293 aaaattgttcaatacaatacaagtttgtcatgt 325  Q
    |||||| |||||||| ||| |||||||||||||    
T  52673814 aaaattattcaataccataaaagtttgtcatgt 52673782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 22318378 - 22318461
Alignment:
Q  204 tgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtc 287  Q
    |||||||||| || ||||  |||||||||||||||||||||| | | ||| || ||||||||||||| |||||||| |||||||    
T  22318378 tgaaatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtc 22318461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 43739564 - 43739457
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| ||||||||||||| || || ||||  ||||||||||||||| ||||||   |  ||||| |||||||||| | ||||||||| |||| |||||||    
T  43739564 atgacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatccacaa 43739465  T
Q  293 aaaattgt 300  Q
    ||||||||    
T  43739464 aaaattgt 43739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 21098632 - 21098534
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaa 296  Q
    ||||| ||||||| || ||||||| |||||||||||| ||||||||||   | ||| || |||||||||| ||||||||||| |||| |||| ||||||    
T  21098632 aaaaattgaaattcttgtctctcactaaaccacaacataactttttgtcgcacgtaaaatttgtctaaaatactaaaataacattttctccataaaaaa 21098534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 45577705 - 45577781
Alignment:
Q  223 taaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaattg 299  Q
    |||||||||||||||||||||||   | || ||| |||||||||| || ||||| || |||||||||||||||||||    
T  45577705 taaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaattg 45577781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 50729525 - 50729609
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||| |||||||||||||||| ||| |||  |||||||| ||||||||||||| | | |||||| |||||||||| || ||||||    
T  50729525 atgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 50729609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 12600984 - 12600885
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||  |||||||    
T  12600984 aaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaat 12600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 39078759 - 39078660
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||| ||||||||||| || ||||  |||||||||||||| |||||||   | |||| | ||||||||||||| |||||||| |||||||| | ||||||    
T  39078759 aaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttgtctaaaacaccaaaataacattttgtcccccaaaaat 39078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 3649734 - 3649644
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| |||||||| || ||||  |||||||| |||||||||||||   | |||||| ||||||||||||| |||||||| ||| ||||    
T  3649734 aaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcc 3649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 47642476 - 47642578
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaa 294  Q
    |||||||||||| |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| |  |||||| | |||||||| | |||    
T  47642476 gataaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 47642575  T
Q  295 aat 297  Q
    |||    
T  47642576 aat 47642578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 50727901 - 50727991
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  50727901 aaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 50727991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 50735915 - 50736005
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  50735915 aaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 50736005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 37859078 - 37859041
Alignment:
Q  18 tgatgttttcctttaacgtttcactttgtgttatattg 55  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  37859078 tgatgttttcctttaacgtttcactttttgttatattg 37859041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 20694469 - 20694369
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  |||||||||| |||||||||||  || |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  20694469 aaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaat 20694370  T
Q  298 t 298  Q
    |    
T  20694369 t 20694369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 4325889 - 4325790
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| |||||||  ||||| ||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  4325889 aaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaat 4325790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 33177020 - 33177119
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | | |||| |||||||||| || |||||||| |||||||| | ||||||    
T  33177020 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttgtctaaaataccaaaataacattttgtcccccaaaaat 33177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 38486240 - 38486335
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||| ||||||| | |||||| || ||||  |||||||| ||||||||||||| ||| |||||| |||||||||| |  |||||| | ||||||||    
T  38486240 atgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaatatcaaaatagcattttgtcc 38486335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 44649152 - 44649251
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||| |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| |  |||||| | |||||||| | ||||||    
T  44649152 aaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 44649251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 52949818 - 52949719
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||| |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| |  |||||| | |||||||| | ||||||    
T  52949818 aaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 52949719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 16320620 - 16320570
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgt 245  Q
    |||||||||||| |||||| || ||||  ||||||||||||||||||||||    
T  16320620 gataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgt 16320570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 23521978 - 23521888
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  23521978 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 23521888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 40792486 - 40792424
Alignment:
Q  227 ccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcca 289  Q
    ||||| ||||||||||||||| | |||||| || ||||||| || |||||| |||||||||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtcca 40792424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 37695499 - 37695576
Alignment:
Q  168 acatgacaaattggggataagaaatatgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgt 245  Q
    |||||| ||||||| | ||||| | | || ||||||||| |||||| || ||||  ||||||||||||||||||||||    
T  37695499 acatgataaattggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaactttttgt 37695576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 10184885 - 10184921
Alignment:
Q  289 acaaaaaattgttcaatacaatacaagtttgtcatgt 325  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  10184885 acaaaaaattgttcaataccataaaagtttgtcatgt 10184921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 38812618 - 38812530
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgt 286  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||    
T  38812618 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgt 38812530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 320
Target Start/End: Original strand, 14155445 - 14155573
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccac-- 290  Q
    |||| ||||||||||||||| ||| |||| |||| || ||||||||||||||| | |||||||| |||||||||| |  |||||||  ||||||||||      
T  14155445 atgacaaaaactgaaatttt-atccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaatatcaaaataatcttttgtccacaa 14155543  T
Q  291 aaaaaattgttcaatacaatacaagtttgt 320  Q
    |||||||| |||||||| ||| ||||||||    
T  14155544 aaaaaattattcaataccataaaagtttgt 14155573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 19906858 - 19906779
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||||||||||||||| || ||||  |||||||| ||||||||||||| | | |||||| ||||||||||||| ||||||    
T  19906858 aaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaacaccaaaata 19906779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 39052827 - 39052926
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| |||||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| |||||||| | ||||||    
T  39052827 aaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaat 39052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 50678894 - 50678815
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||||| |||||| |||||||  |||||||||||||||||||||| | | |||||| |||||||||| || ||||||    
T  50678894 aaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaata 50678815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 26106712 - 26106621
Alignment:
Q  199 aaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccac 290  Q
    |||| |||||||||| |  |||| |||||||||||||||  ||||||| |||||| || || ||||||| |  |||||||||||||||||||    
T  26106712 aaaagtgaaatttttgttcctcactaaaccacaacacaatcttttgttcaaagtataagttttctaaaatagcaaaataactttttgtccac 26106621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 51296677 - 51296578
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  |||||||||||||| |||||||   |||||||| |||||||||| || |||||| | |||||||| ||||||||    
T  51296677 aaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtctaaaatacaaaaatagcattttgtccccaaaaaat 51296578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 21221349 - 21221439
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  21221349 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 21221439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 40094599 - 40094509
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| ||||||||||||||| | |||||| |||||||||| || |||||| | ||||||||    
T  40094599 aaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagcattttgtcc 40094509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 3964384 - 3964287
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaa 295  Q
    |||||||||||||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||| | ||| |||| ||||||    
T  3964384 aaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcatttcgtccccaaaaa 3964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 297
Target Start/End: Original strand, 3867633 - 3867737
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| |||| ||||||||||| || ||||  |||||||| |||||||||||||   | |||||| || |||||||||| |||||| | |||||||| | |    
T  3867633 atgacaaaacctgaaatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtccccca 3867732  T
Q  293 aaaat 297  Q
    |||||    
T  3867733 aaaat 3867737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 3864690 - 3864761
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaa 295  Q
    ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||| ||||||    
T  3864690 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccccaaaaa 3864761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 38213450 - 38213351
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  38213450 aaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataccattttgtcccccaaaaat 38213351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 28675886 - 28675796
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  28675886 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 28675796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 29584971 - 29584881
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  29584971 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 29584881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 32768693 - 32768599
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtc 287  Q
    |||| ||||| ||||||| || || |||| ||||||||| |||||||||  |||  || ||| | |||||||||| ||||||||||| |||||||    
T  32768693 atgacaaaaattgaaattattgtccctcactaaaccacatcacaactttccgttccaattactatttgtctaaaatactaaaataaccttttgtc 32768599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 42636392 - 42636482
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  42636392 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 42636482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 8648541 - 8648638
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccac 290  Q
    |||| ||||||||||||| || |  || | ||||| ||| |||||||||||||   |||||||| |||||||||| || |||||||  ||||||||||    
T  8648541 atgacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaataatcttttgtccac 8648638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 34351383 - 34351456
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||||||||||||||||   |  ||||| |||||||||| |  |||||||| |||| ||||||||||||    
T  34351383 aaaccacaacacaactttttgtcgcacatacaagttgtctaaaatatcaaaataacattttatccacaaaaaat 34351456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 1344722 - 1344786
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||| ||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  1344722 aaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 1344786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 49748895 - 49748947
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgt 245  Q
    |||| ||||||||| |||||| || ||||  ||||||||||||||||||||||    
T  49748895 atgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgt 49748947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 8222754 - 8222863
Alignment:
Q  192 tatgataaaaactgaaatttttatctctcaataaaccacaacacaacttt-ttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccac 290  Q
    ||||||||||||| ||||| | |||||||| ||| | ||||||||| ||| |||||| |||||||| || ||||||  |||||||||| ||||||||||     
T  8222754 tatgataaaaactaaaattatcatctctcattaatctacaacacaattttgttgtttcaagtacaatttatctaaattactaaaataattttttgtccat 8222853  T
Q  291 aaaaaattgt 300  Q
    ||||||||||    
T  8222854 aaaaaattgt 8222863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 41790463 - 41790562
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| ||||||||||| |||||||| | ||||||    
T  41790463 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtcccccaaaaat 41790562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 553492 - 553402
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| |||||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  553492 aaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 553402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 22432310 - 22432389
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||||| |||||| || ||||  |||||||||||||| ||||||| | |||||||| |||||||||| || ||||||    
T  22432310 aaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaataccaaaata 22432389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 39918602 - 39918503
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  |||||||| ||||||||||||| | | |||||| |||||||||| || |||||||| |||||||| | ||||||    
T  39918602 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaat 39918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 8560983 - 8561080
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaa 295  Q
    ||||||||| |||||| |  ||||  |||||||| ||||||||||||||  | |||||| |||||||||| || |||||||| ||| |||| ||||||    
T  8560983 aaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaataacatttcgtccccaaaaa 8561080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 39788288 - 39788188
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataac-tttttgtccacaaaaaa 296  Q
    ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| ||||||||||| ||||||||| | |||||    
T  39788288 aaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacatttttgtcccccaaaaa 39788189  T
Q  297 t 297  Q
    |    
T  39788188 t 39788188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 3735452 - 3735353
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||| |||||| ||  |||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| |||||||| | ||||||    
T  3735452 aaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaat 3735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 28090516 - 28090611
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||| ||||||| | |||||| || ||||  |||| |||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  28090516 atgacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaataacattttgtcc 28090611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 2351775 - 2351685
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  2351775 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 2351685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 18470429 - 18470519
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||||||||| || || |  |||||||| ||||||||||| |   | |||||| ||||||||||||| |||||||| ||| ||||    
T  18470429 aaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaacaccaaaataacatttcgtcc 18470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 31770592 - 31770682
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | ||||||||| ||||  ||||||||||||||||||||||   | |||||| |||||| ||| || |||||| | ||||||||    
T  31770592 aaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagcattttgtcc 31770682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 32528810 - 32528720
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  32528810 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 32528720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 35701372 - 35701282
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||| |||||||||||  | |||||| |||||||||| || |||||| | ||||||||    
T  35701372 aaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgtcc 35701282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 5571671 - 5571724
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||||||||||||||||||  || |||||| |||||||||| || ||||||    
T  5571671 aaaccacaacacaactttttgtccaacgtacaagttgtctaaaataccaaaata 5571724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 8136932 - 8136851
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataac 279  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || ||||||||    
T  8136932 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaaaataac 8136851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 1338720 - 1338624
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcca 289  Q
    |||| ||||||||||||| || ||| | | ||||  |||| |||| ||||||| |||| ||||| |||||||||| |  ||||||| ||||||||||    
T  1338720 atgacaaaaactgaaattcttgtctttaattaaattacaagacaattttttgtataaattacaagttgtctaaaatatcaaaataattttttgtcca 1338624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 23091331 - 23091395
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||||||||||||||| | | ||| || |||||||||| |  |||||||| ||||||||    
T  23091331 aaaccacaacacaactttttgtctcacgtataaattgtctaaaatatcaaaataacattttgtcc 23091395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 10324145 - 10324244
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| || |||||||| |||||||| ||||||||    
T  10324145 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtccccaaaaaat 10324244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 9902692 - 9902791
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||| |||||| || |||| ||||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||| |||| | ||||||    
T  9902692 aaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcgtcccccaaaaat 9902791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 10960095 - 10959996
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||| ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  10960095 aaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtcccccaaaaat 10959996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 3932841 - 3932931
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| |||||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  3932841 aaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 3932931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 11382133 - 11382069
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  11382133 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 11382069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 18597187 - 18597271
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||| |||| ||||||||||| || ||||  ||||||||||||||||||||||   | ||| || ||||||||||| ||||||||    
T  18597187 atgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtctaaaacgctaaaata 18597271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 11279223 - 11279144
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||| | |||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| || ||||||    
T  11279223 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaata 11279144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 24203457 - 24203367
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  24203457 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 24203367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 17867933 - 17867840
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  17867933 gataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtcc 17867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 17877716 - 17877623
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  17877716 gataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtcc 17877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 298
Target Start/End: Original strand, 4494149 - 4494249
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  ||||||||  ||||||||||||   | |||||| |||||||||| ||  ||||||| |||||||| ||||||||    
T  4494149 aaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccgaaataacattttgtccccaaaaaat 4494248  T
Q  298 t 298  Q
    |    
T  4494249 t 4494249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 167 - 298
Target Start/End: Original strand, 41366074 - 41366205
Alignment:
Q  167 gacatgacaaattggggataagaaatatgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaa 266  Q
    ||||||||||| ||| |  |||| ||| || |||||||||||||||| || ||||  |||||||||||||| ||||||| | |  ||||| |||||||||    
T  41366074 gacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtctaaa 41366173  T
Q  267 acactaaaataactttttgtccacaaaaaatt 298  Q
    | || |||||||| || | |||||||||||||    
T  41366174 ataccaaaataacattgtatccacaaaaaatt 41366205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 289
Target Start/End: Original strand, 18126983 - 18127074
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcca 289  Q
    |||| ||||| ||||| ||| ||| ||||||||||||||||||||||| | |||||||| || | ||||| |  |||||||| |||||||||    
T  18126983 aaaagctgaactttttgtctatcattaaaccacaacacaactttttgtctcaagtacaagttatgtaaaatagcaaaataacgttttgtcca 18127074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 41934676 - 41934577
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||||||| || |   ||| |||||||||||||||||||||||   | ||| || |||||||||| || |||||||| |||||||||| ||||||    
T  41934676 aaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaataccaaaataacattttgtccaccaaaaat 41934577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 6896266 - 6896184
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||||||||||||||| || ||||  |||| ||| |||||||||||||   | |||||| ||||||||||||| ||||||    
T  6896266 gataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 6896184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 18685931 - 18685841
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| |||||||  |||||||| |||||||||||||   | |||||| |||||||||| | ||||||||| ||||||||    
T  18685931 aaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatattaaaataacattttgtcc 18685841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 37003863 - 37003953
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  37003863 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtcc 37003953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 7258992 - 7258901
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataac-tttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| ||||||||||||| | | |||||| |||||||||| || |||||||| |||||||||    
T  7258992 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacatttttgtcc 7258901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 7761568 - 7761658
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| ||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  7761568 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 7761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 16104369 - 16104279
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| ||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  16104369 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcattttgtcc 16104279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 33889338 - 33889248
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  33889338 aaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 33889248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 44284724 - 44284634
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || |||| ||||||||| ||||||||||||| | | |||||| |||||||||| |  |||||| | ||||||||    
T  44284724 aaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcattttgtcc 44284634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 3913481 - 3913534
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||||||||||||||||||||||  | |||||| |||||||||| || ||||||    
T  3913481 aaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaata 3913534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 40876614 - 40876663
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttt 242  Q
    |||| |||| || |||||||||||| ||| ||||||||||||||||||||    
T  40876614 atgacaaaagctcaaatttttatctttcattaaaccacaacacaactttt 40876663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 42365646 - 42365573
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||||||||||||||||||| | | | | |||| |||||||||| || |||||||| |||||||| | ||||||    
T  42365646 aaaccacaacacaactttttatatcacggacaagttgtctaaaataccaaaataacattttgtcccctaaaaat 42365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 2086141 - 2086077
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||||  |||||||||||||| | |||||| |||||| ||| || |||||||| ||||||||    
T  2086141 aaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtcc 2086077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 8112395 - 8112347
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtt 246  Q
    ||||||| | |||||| |||||||  |||||||||||||||||||||||    
T  8112395 aaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtt 8112347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 297
Target Start/End: Original strand, 12939290 - 12939394
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| ||||||||| |||||| ||  |||  |||||||| ||||||||||| | | | |||||| |||||||| | || |||||||| |||||||| | |    
T  12939290 atgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaataacattttgtccccca 12939389  T
Q  293 aaaat 297  Q
    |||||    
T  12939390 aaaat 12939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 16177904 - 16177956
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaat 276  Q
    |||||||||||||||||||||| | | |||||| |||||||||| || |||||    
T  16177904 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaat 16177956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 26418992 - 26418916
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaattgt 300  Q
    |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| |||| ||| | |||||||||    
T  26418992 aaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccaaaaattgt 26418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 32497984 - 32497920
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||| |||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  32497984 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 32497920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 38786523 - 38786592
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaa 266  Q
    ||||||||||||||||||  ||||||| ||||||| |||||||| |||||| | | ||| || |||||||||    
T  38786523 gataaaaactgaaatttt--tctctcactaaaccaaaacacaacattttgtctcacgtataagttgtctaaa 38786592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 22756429 - 22756539
Alignment:
Q  206 aaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaattgttcaat 305  Q
    ||||||||||| |||| || |||||||||||||||||||| | | |||||| || ||||||| || ||||||  ||||| ||||| ||||||| ||||||    
T  22756429 aaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccaccaaaaattattcaat 22756528  T
Q  306 acaatacaagt 316  Q
    || ||| ||||    
T  22756529 actatagaagt 22756539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 14005080 - 14005156
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaattgt 300  Q
    ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||| ||||||||||    
T  14005080 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccataaaaaattgt 14005156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 10656696 - 10656795
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||||||||| ||||| ||  |||  |||||||||||||||||||||| | | |||||| |||||||||| |  ||||||||  ||||||||||||||||    
T  10656696 aaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatatcaaaataacaatttgtccacaaaaaat 10656795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 7394819 - 7394914
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||| ||||||| | |||||| || ||||  |||||| ||||||||||||||| | | |||||| |||||||||| || |||||||| ||||||||    
T  7394819 atgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcc 7394914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 6386671 - 6386581
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  6386671 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 6386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 15001561 - 15001514
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgt 245  Q
    |||||||||||||||| || ||||  ||||||||||||||||||||||    
T  15001561 aaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgt 15001514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 29611065 - 29611144
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||||||||||||||| || |||   ||||||||||||||||||||||   | ||| || ||||||||||||| ||||||    
T  29611065 aaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacaccaaaata 29611144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 30543032 - 30543131
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||| ||   | |||||| |||||||||| || |||||||| |||||||| | ||||||    
T  30543032 aaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaat 30543131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 32020011 - 32020090
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||| | ||||||||| ||||  |||||||| ||||||||||||||  | |||||| |||||||||| || ||||||    
T  32020011 aaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaata 32020090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 40389135 - 40389088
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgt 245  Q
    ||||||||| ||||||||||||||  |||||||| |||||||||||||    
T  40389135 aaaaactgatatttttatctctcaccaaaccacagcacaactttttgt 40389088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 8673065 - 8673155
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  8673065 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 8673155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 14959028 - 14958955
Alignment:
Q  223 taaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||||||||||||||||||||||   | |||||| | |||||||| |  |||||||||||||| |||||||||||    
T  14959028 taaaccacaacacaactttttgtcccacgtacaagt-gtctaaaatatcaaaataactttttgcccacaaaaaat 14958955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 21272779 - 21272689
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| ||||||||| | ||||||||    
T  21272779 aaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtcc 21272689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 27393289 - 27393356
Alignment:
Q  223 taaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    ||||||||| |||||||||  || |||||||||| ||| ||||||||| ||| ||||||||||| |||||    
T  27393289 taaaccacatcacaacttt--gtctaaagtacaagttgcctaaaacaccaaagtaactttttgttcacaa 27393356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 32303595 - 32303685
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  32303595 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 32303685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 37618402 - 37618504
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||| |||||| || ||||  |||||||||||||||||||||| | | |||||| |||| | ||| || |||||| | ||| |||| | ||||||    
T  37618402 aaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgttttaaataccaaaatagcatttcgtcccccaaaaat 37618501  T
Q  298 tgt 300  Q
    |||    
T  37618502 tgt 37618504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 10932835 - 10932735
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||||||||||| ||| |||| || |||| ||||||||| |||||||||| |||  | |||||| |||||||||| || ||||||   ||||||||| ||    
T  10932835 atgataaaaact-aaaattttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccataa 10932737  T
Q  293 aa 294  Q
    ||    
T  10932736 aa 10932735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 12753361 - 12753434
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||||||||||||||||   |  ||||| |||||||||| || |||||||| |||||||| | ||||||    
T  12753361 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtcccccaaaaat 12753434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 36426282 - 36426355
Alignment:
Q  223 taaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaa 296  Q
    |||||||||||||| |||||||| | |  ||||| |||||||||| || ||||||   ||||||||||||||||    
T  36426282 taaaccacaacacatctttttgtctcacatacaagttgtctaaaataccaaaatagtcttttgtccacaaaaaa 36426355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 6029371 - 6029461
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||||||||| || ||||  ||||||||||||||||||||||   | |||||| ||||||||||||| |||||||| ||| ||||    
T  6029371 aaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcc 6029461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 50382473 - 50382563
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||||||||| ||  |||  ||||||||||||||||||||||   | |||||| ||||||||||||| |||||||| ||||||||    
T  50382473 aaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataacattttgtcc 50382563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 13994145 - 13994242
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaa 295  Q
    |||||||||||||||| || ||||  |||||||||||||||||||||| | | |||||| |||||||||| || |||||| | ||| |||| ||||||    
T  13994145 aaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaataccaaaatagcatttcgtccccaaaaa 13994242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 2761641 - 2761723
Alignment:
Q  213 tatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaa 295  Q
    |||| |||| ||||||||||||||| ||||||| | |||||||| || ||||||| || ||||||  |||||||| |||||||    
T  2761641 tatccctcactaaaccacaacacaattttttgtctcaagtacaaattatctaaaatacaaaaatagatttttgtcaacaaaaa 2761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 5109806 - 5109731
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaattgt 300  Q
    |||||||| |||||||||||||  ||||||||| ||||||||||  | |||||||| |||||||| | |||||||||    
T  5109806 aaaccacatcacaactttttgtccaaagtacaagttgtctaaaatgc-aaaataacattttgtcccccaaaaattgt 5109731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 17888026 - 17887962
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||||||||||||||||||   | |||||| |||||||||| || |||||||| ||||||||    
T  17888026 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 17887962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 39792918 - 39792830
Alignment:
Q  191 atatgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataac 279  Q
    |||||| ||||| ||||||| || ||  |||  ||||||||||||||||| |||||| | |||||| |||||||||| | |||||||||    
T  39792918 atatgacaaaaattgaaattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaaataataaaataac 39792830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 41967945 - 41968021
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaattgt 300  Q
    |||||||||||||||||||||| | | |||||| |||||||||| || |||||| | |||||||  | |||||||||    
T  41967945 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagccttttgtctcccaaaaattgt 41968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 15539960 - 15540059
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||| |||||| |||| ||| |||  |||||||| |||||||||||||   | ||| || ||||||||||||| |||||||| |||||||| | ||||||    
T  15539960 aaaacctgaaacttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaacaccaaaataacattttgtcccccaaaaat 15540059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 28437719 - 28437680
Alignment:
Q  228 cacaacacaactttttgtttaaagtacaacttgtctaaaa 267  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  28437719 cacatcacaactttttgtttaaagtacaacttgtccaaaa 28437680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 41973020 - 41972925
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||| ||||||| | |||||| || ||||  ||||||||  |||||||||||| | | |||||| |||||||||| || |||||||| ||||||||    
T  41973020 atgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcc 41972925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 45490940 - 45491035
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||| ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  45490940 atgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 45491035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 570497 - 570388
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaa--cacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccac 290  Q
    ||||||||||| ||||||||| || ||||  |||||||||  ||||||||||||| |   ||| || |||||||||| |  |||||||| |||| |||||    
T  570497 atgataaaaacagaaatttttgtccctcaccaaaccacaatgcacaactttttgtctcgcgtataagttgtctaaaatatcaaaataacattttttccac 570398  T
Q  291 aaaaaattgt 300  Q
     |||||||||    
T  570397 caaaaattgt 570388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 16451231 - 16451141
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| |||||||  ||||||||||||||||||||||   |  ||||| |||||||||| || |||||| | ||||||||    
T  16451231 aaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtcc 16451141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 28340373 - 28340463
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  |||||||| ||||||||||||| | | |||||| |||||||||| || |||||| | ||||||||    
T  28340373 aaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 28340463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 34283881 - 34283931
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaacttttt 243  Q
    |||| ||||| ||||||| || ||| |||||||||||||||||||||||||    
T  34283881 atgacaaaaattgaaattattgtctttcaataaaccacaacacaacttttt 34283931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 42510629 - 42510539
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| |||||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  42510629 aaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 42510539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 51264599 - 51264509
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||| ||||| ||||||||| | ||||||||    
T  51264599 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatagcattttgtcc 51264509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 1351505 - 1351594
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtc 287  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||    
T  1351505 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 1351594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 1601251 - 1601178
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||||||||||||||||   |  ||||| |||||||||| || |||||| | |||||||||| ||||||    
T  1601251 aaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccaccaaaaat 1601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 6144056 - 6144145
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtc 287  Q
    |||||||| ||||||| || |||   |||||||||||||||||||| |   | ||| || ||||||||||||| |||||||| |||||||    
T  6144056 aaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtctaaaacacaaaaataacattttgtc 6144145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 16476222 - 16476327
Alignment:
Q  195 gataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaa 294  Q
    |||||||||| | |||||| || ||||  |||||||  |||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | |||    
T  16476222 gataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaa 16476321  T
Q  295 aattgt 300  Q
    ||||||    
T  16476322 aattgt 16476327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 50540422 - 50540349
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  50540422 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaat 50540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 26733664 - 26733580
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||| ||||||||||||| || || | || ||||||| ||||||||||||||  | | |||||| |||||||||| || ||||||    
T  26733664 atgacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaata 26733580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 43310335 - 43310387
Alignment:
Q  191 atatgataaaaactgaaatttttatctctcaataaaccacaacacaacttttt 243  Q
    |||||||||||||||||||| |||||| | | |||| || |||||||||||||    
T  43310335 atatgataaaaactgaaattcttatcttttattaaatcataacacaacttttt 43310387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 49303477 - 49303521
Alignment:
Q  251 gtacaacttgtctaaaacactaaaataactttttgtccacaaaaa 295  Q
    |||||| |||||||||| ||||||||||| |||||||| ||||||    
T  49303477 gtacaagttgtctaaaatactaaaataacattttgtccccaaaaa 49303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 48699497 - 48699398
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||||||||| || || |||| ||||||||||||||||| ||||||  | |||||| |||||||||| || ||||||   || ||||||||||||||    
T  48699497 aaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatagacttatgtccacaaaaaat 48699398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 30599030 - 30599103
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||||||||||||||||||||| | |||||||| || ||||||| || |||||||| |||||||| | ||||||    
T  30599030 aaaccacaacacaactttttgtctcaagtacaaattatctaaaataccaaaataacattttgtcccctaaaaat 30599103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 329569 - 329470
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    |||||||||||||||| || ||||  |||||||| |||||||||||||   | |||||| ||| ||||||||| |||||| | |||||||| | ||||||    
T  329569 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatagcattttgtcccccaaaaat 329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 21133471 - 21133392
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    ||||||||| ||| || || |||||||||||||| ||||||||||||| | |  ||||| |||||||||| || ||||||    
T  21133471 aaaaactgatattattttccctcaataaaccacatcacaactttttgtctcacatacaaattgtctaaaataccaaaata 21133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 21784970 - 21784871
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  21784970 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaat 21784871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 44748794 - 44748695
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaaaaaat 297  Q
    ||||||| |||||||| || ||||  ||||||||| ||||||||||||   | |||||| |||||||||| || |||||| | |||||||| | ||||||    
T  44748794 aaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaat 44748695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 1870234 - 1870144
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| |  |||||||| ||||||||    
T  1870234 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtcc 1870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 23349287 - 23349365
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaat 276  Q
    ||||||||| |||||| || ||||  ||||||||||||||||||||||   |  ||||| |||||||||| ||||||||    
T  23349287 aaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatactaaaat 23349365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 46633796 - 46633706
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | ||||||||| ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  46633796 aaaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 46633706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 29372775 - 29372844
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaa 267  Q
    ||||||| |||||||| ||  ||| ||||||||||||||||||| ||||  | |||||| ||||||||||    
T  29372775 aaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaa 29372844  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 297
Target Start/End: Complemental strand, 17237180 - 17237076
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| ||||||| | |||||| ||  ||| ||||||||||||||||||||||| | | |||||| || |||||||  | |||||||| ||| |||| | |    
T  17237180 atgacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaaattatctaaaaatccaaaataacatttcgtccccca 17237081  T
Q  293 aaaat 297  Q
    |||||    
T  17237080 aaaat 17237076  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 32873791 - 32873855
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||||||||||||||||||| | | |||||| |||||| ||| || |||||| | ||||||||    
T  32873791 aaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatagcattttgtcc 32873855  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 34117558 - 34117482
Alignment:
Q  191 atatgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaa 267  Q
    |||||||||||||| | |||||| || ||||  |||||||| ||||| ||||||||  | |||||| ||||||||||    
T  34117558 atatgataaaaactcatatttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaa 34117482  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 43158708 - 43158772
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||||||||||||||||||   | |||||| ||||||||||||  |||||| | ||||||||    
T  43158708 aaaccacaacacaactttttgtcccacgtacaagttgtctaaaacatcaaaatagcattttgtcc 43158772  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 297
Target Start/End: Complemental strand, 48445625 - 48445521
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| |||||||||||||||| ||  |||  ||| ||||  |||||||||||| |    ||||| ||||||||||||| |||||||| |||||||| | |    
T  48445625 atgacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaacacgaaaataacattttgtccccca 48445526  T
Q  293 aaaat 297  Q
    |||||    
T  48445525 aaaat 48445521  T

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Target: scaffold0650 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 1644 - 1723
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||||||||||||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || ||||||    
T  1644 aaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaata 1723  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 15241 - 15188
Alignment:
Q  224 aaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||||||||||||||||||||| | | |||||| |||||||||| |||||||||    
T  15241 aaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaata 15188  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 42951 - 43029
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||||||||||||| | || ||||  ||||||||||||||||||||||   | |||||| ||||||||||||| ||||||    
T  42951 aaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtacaa-ttgtctaaaacaccaaaata 43029  T

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Target: scaffold0169 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 12537 - 12627
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  12537 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 12627  T

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Target: scaffold0169; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 18055 - 18145
Alignment:
Q  198 aaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  18055 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 18145  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 372958 - 373055
Alignment:
Q  191 atatgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtcc 288  Q
    |||||| ||||||| | |||||| || ||||  |||||| |||||||||||||||   | |||||| |||||||||| || |||||| | ||||||||    
T  372958 atatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtcc 373055  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 15377 - 15461
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaata 277  Q
    |||| ||||||| | |||||| || ||||  ||||||||||||||||||||||   | |||||| |||||||||| || ||||||    
T  15377 atgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaata 15461  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 297
Target Start/End: Complemental strand, 102049 - 101945
Alignment:
Q  193 atgataaaaactgaaatttttatctctcaataaaccacaacacaactttttgtttaaagtacaacttgtctaaaacactaaaataactttttgtccacaa 292  Q
    |||| ||||||| | |||||| || ||||  |||||||| |||||||||||||   | |||||| |||||||||| || |||||| | ||||||||  ||    
T  102049 atgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaa 101950  T
Q  293 aaaat 297  Q
    |||||    
T  101949 aaaat 101945  T

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