View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21413_high_40 (Length: 223)
Name: NF21413_high_40
Description: NF21413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21413_high_40 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 34971297 - 34971107
Alignment:
| Q |
15 |
tatgaatgatgtgtagaccctcttgcttgtatatttgtaaaaagtagtgtctgcatgttttggtcagatgatgattggtttcttgttcctttctatcttt |
114 |
Q |
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| T |
34971297 |
tatgaatgatgtatagaccctcttgcttgtatatttgtaaaaagtggtgtctgcatgttttggtcagatgatgattggtttcttgttcctttctatcttt |
34971198 |
T |
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| Q |
115 |
tctcattttggtgttactgcttgagtattatacttccatttggatagattctcacatttatttcaataatatatagagttggagtatatga |
205 |
Q |
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| T |
34971197 |
tctcattttggtgttactgcttgagtattatacttccatttggatagatgctcgcatttatttcaataatatatagagttggagtatatga |
34971107 |
T |
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