View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21413_low_28 (Length: 294)

Name: NF21413_low_28
Description: NF21413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21413_low_28
NF21413_low_28
[»] chr2 (63 HSPs)
chr2 (7-182)||(649593-649767)
chr2 (44-182)||(4808981-4809120)
chr2 (42-182)||(63263-63404)
chr2 (7-168)||(16175668-16175830)
chr2 (42-182)||(5560855-5560996)
chr2 (42-182)||(11539943-11540084)
chr2 (46-182)||(20128042-20128179)
chr2 (42-182)||(32418257-32418398)
chr2 (7-183)||(42192546-42192723)
chr2 (7-182)||(4355821-4355996)
chr2 (7-169)||(11539703-11539866)
chr2 (7-172)||(38008016-38008182)
chr2 (42-182)||(43160110-43160251)
chr2 (7-172)||(33920678-33920843)
chr2 (42-172)||(16953249-16953380)
chr2 (42-169)||(63057-63185)
chr2 (7-180)||(42192306-42192479)
chr2 (42-182)||(43216014-43216155)
chr2 (42-169)||(38008269-38008397)
chr2 (7-169)||(20127802-20127965)
chr2 (16-169)||(43160328-43160482)
chr2 (42-169)||(15550992-15551120)
chr2 (42-169)||(44219744-44219872)
chr2 (42-182)||(13399522-13399661)
chr2 (42-169)||(4809197-4809325)
chr2 (42-169)||(13399738-13399866)
chr2 (42-169)||(33920930-33921057)
chr2 (61-169)||(4356074-4356183)
chr2 (42-169)||(13315596-13315725)
chr2 (42-169)||(6949552-6949680)
chr2 (44-168)||(44219962-44220089)
chr2 (45-135)||(16953040-16953131)
chr2 (45-135)||(17061011-17061102)
chr2 (43-149)||(22445741-22445848)
chr2 (7-150)||(9330131-9330275)
chr2 (95-181)||(6949758-6949844)
chr2 (42-143)||(43215809-43215911)
chr2 (7-172)||(15550739-15550905)
chr2 (220-276)||(654409-654465)
chr2 (46-169)||(9329985-9330108)
chr2 (42-162)||(28143355-28143475)
chr2 (63-150)||(25335944-25336032)
chr2 (42-180)||(32418464-32418592)
chr2 (72-143)||(40027270-40027342)
chr2 (110-143)||(239521-239554)
chr2 (72-180)||(1978238-1978347)
chr2 (111-180)||(22374490-22374559)
chr2 (98-143)||(24140008-24140053)
chr2 (42-99)||(24140068-24140125)
chr2 (65-169)||(26538396-26538500)
chr2 (72-143)||(11090651-11090723)
chr2 (111-143)||(40815688-40815720)
chr2 (78-143)||(3025601-3025667)
chr2 (110-180)||(43058502-43058572)
chr2 (110-143)||(7446514-7446547)
chr2 (72-180)||(18451137-18451246)
chr2 (110-143)||(22374658-22374691)
chr2 (110-143)||(28616947-28616980)
chr2 (110-143)||(40815524-40815557)
chr2 (110-143)||(43058666-43058699)
chr2 (111-143)||(1978442-1978474)
chr2 (72-143)||(14432272-14432344)
chr2 (111-143)||(14941952-14941984)
[»] chr1 (71 HSPs)
chr1 (16-182)||(1744401-1744568)
chr1 (43-182)||(4080122-4080262)
chr1 (42-182)||(1837605-1837747)
chr1 (7-182)||(30786838-30787013)
chr1 (42-182)||(37505373-37505514)
chr1 (42-149)||(52335848-52335956)
chr1 (7-182)||(16298748-16298923)
chr1 (7-182)||(10278614-10278790)
chr1 (42-143)||(34555724-34555826)
chr1 (42-167)||(37421262-37421388)
chr1 (42-182)||(443856-443997)
chr1 (7-172)||(8229956-8230121)
chr1 (42-182)||(17641669-17641810)
chr1 (43-182)||(34555482-34555622)
chr1 (42-181)||(44582157-44582297)
chr1 (42-172)||(23340283-23340414)
chr1 (42-172)||(50304882-50305013)
chr1 (44-169)||(17641467-17641593)
chr1 (42-182)||(9992460-9992601)
chr1 (42-169)||(9992255-9992383)
chr1 (42-169)||(44954326-44954454)
chr1 (42-169)||(50305100-50305228)
chr1 (42-180)||(8229740-8229879)
chr1 (42-172)||(44954541-44954672)
chr1 (42-135)||(21938663-21938757)
chr1 (61-169)||(29021182-29021291)
chr1 (43-169)||(10278868-10278995)
chr1 (42-180)||(16298989-16299128)
chr1 (7-182)||(29438996-29439172)
chr1 (43-128)||(6224800-6224886)
chr1 (7-180)||(37505133-37505307)
chr1 (61-169)||(9833470-9833579)
chr1 (42-162)||(50926332-50926453)
chr1 (42-143)||(44582401-44582504)
chr1 (46-169)||(30787090-30787214)
chr1 (42-115)||(2868080-2868154)
chr1 (61-143)||(29020999-29021082)
chr1 (61-143)||(23526777-23526859)
chr1 (61-162)||(50926566-50926668)
chr1 (72-180)||(29869750-29869859)
chr1 (60-162)||(17088464-17088568)
chr1 (7-143)||(39485131-39485266)
chr1 (72-154)||(50970610-50970693)
chr1 (110-180)||(5540125-5540195)
chr1 (110-180)||(18984288-18984358)
chr1 (96-169)||(23526857-23526930)
chr1 (42-143)||(44291404-44291504)
chr1 (42-105)||(2868011-2868075)
chr1 (60-143)||(17088268-17088352)
chr1 (72-143)||(21856386-21856458)
chr1 (65-143)||(29307285-29307363)
chr1 (110-180)||(9019142-9019212)
chr1 (110-180)||(17433385-17433455)
chr1 (110-180)||(39154188-39154258)
chr1 (107-169)||(44291625-44291687)
chr1 (72-180)||(15173226-15173335)
chr1 (110-143)||(17433548-17433581)
chr1 (110-143)||(29307121-29307154)
chr1 (72-143)||(5962921-5962993)
chr1 (110-162)||(17112460-17112512)
chr1 (110-162)||(21856221-21856273)
chr1 (78-180)||(4636108-4636211)
chr1 (65-143)||(9019306-9019384)
chr1 (110-180)||(8678848-8678918)
chr1 (42-143)||(45048255-45048356)
chr1 (110-143)||(5539995-5540028)
chr1 (110-143)||(18984452-18984485)
chr1 (110-143)||(26859403-26859436)
chr1 (95-132)||(29439286-29439323)
chr1 (111-180)||(33144225-33144294)
chr1 (110-143)||(39154353-39154386)
[»] chr3 (89 HSPs)
chr3 (42-182)||(49951851-49951992)
chr3 (7-182)||(51828605-51828781)
chr3 (7-172)||(51828023-51828188)
chr3 (42-184)||(40275397-40275540)
chr3 (42-172)||(49720471-49720602)
chr3 (7-182)||(38535600-38535775)
chr3 (42-182)||(330141-330282)
chr3 (42-182)||(14654496-14654637)
chr3 (42-182)||(43678589-43678730)
chr3 (42-172)||(51472955-51473086)
chr3 (7-169)||(46013740-46013903)
chr3 (44-172)||(2044373-2044502)
chr3 (42-150)||(25534991-25535100)
chr3 (42-182)||(32730489-32730630)
chr3 (42-182)||(46013522-46013663)
chr3 (7-180)||(51473162-51473336)
chr3 (42-183)||(52375635-52375777)
chr3 (42-182)||(44676572-44676713)
chr3 (42-169)||(43678395-43678523)
chr3 (42-169)||(51828858-51828986)
chr3 (7-184)||(52236882-52237059)
chr3 (42-172)||(34104738-34104868)
chr3 (44-182)||(55389902-55390041)
chr3 (7-169)||(40838970-40839132)
chr3 (42-169)||(51828275-51828403)
chr3 (42-172)||(34104963-34105094)
chr3 (42-172)||(40838752-40838883)
chr3 (7-169)||(41998295-41998458)
chr3 (42-143)||(47431797-47431899)
chr3 (42-169)||(40275195-40275323)
chr3 (46-169)||(49951650-49951774)
chr3 (42-169)||(50662730-50662858)
chr3 (42-169)||(52375427-52375555)
chr3 (42-172)||(39010175-39010305)
chr3 (42-135)||(32730741-32730835)
chr3 (46-169)||(44676790-44676914)
chr3 (42-135)||(30513822-30513915)
chr3 (42-143)||(52237161-52237263)
chr3 (42-182)||(41998535-41998674)
chr3 (69-169)||(43222517-43222618)
chr3 (69-169)||(43222707-43222808)
chr3 (16-172)||(22370671-22370828)
chr3 (42-132)||(2051399-2051490)
chr3 (60-169)||(14654309-14654419)
chr3 (42-143)||(16701133-16701235)
chr3 (42-163)||(27200016-27200137)
chr3 (42-143)||(55389705-55389807)
chr3 (60-143)||(55192235-55192319)
chr3 (43-180)||(49407897-49408034)
chr3 (42-169)||(49720689-49720807)
chr3 (85-169)||(329979-330064)
chr3 (95-165)||(39010395-39010465)
chr3 (42-162)||(36701421-36701541)
chr3 (60-143)||(27199820-27199904)
chr3 (72-179)||(41046830-41046938)
chr3 (42-180)||(37075789-37075927)
chr3 (42-102)||(38535409-38535470)
chr3 (72-143)||(5137110-5137182)
chr3 (72-143)||(24300899-24300971)
chr3 (110-182)||(26274871-26274943)
chr3 (72-143)||(39555920-39555992)
chr3 (110-144)||(17464833-17464867)
chr3 (110-180)||(26837662-26837732)
chr3 (78-143)||(30104617-30104683)
chr3 (42-143)||(37847164-37847265)
chr3 (110-180)||(50900835-50900905)
chr3 (110-143)||(8873869-8873902)
chr3 (110-143)||(22425156-22425189)
chr3 (110-143)||(23644631-23644664)
chr3 (110-143)||(25853570-25853603)
chr3 (110-143)||(33412350-33412383)
chr3 (110-143)||(37076008-37076041)
chr3 (110-162)||(2323696-2323748)
chr3 (112-180)||(27393883-27393951)
chr3 (112-180)||(29801587-29801655)
chr3 (72-143)||(37727059-37727131)
chr3 (64-143)||(49408128-49408207)
chr3 (115-167)||(50900715-50900767)
chr3 (62-143)||(8874031-8874111)
chr3 (110-180)||(32535265-32535335)
chr3 (113-150)||(5137307-5137344)
chr3 (110-143)||(17464670-17464703)
chr3 (110-143)||(20840894-20840927)
chr3 (110-143)||(23644797-23644830)
chr3 (110-143)||(25853413-25853446)
chr3 (110-143)||(31778995-31779028)
chr3 (110-143)||(32535138-32535171)
chr3 (110-143)||(39555756-39555789)
chr3 (111-143)||(55087655-55087687)
[»] chr8 (46 HSPs)
chr8 (43-182)||(35693971-35694111)
chr8 (42-182)||(599632-599773)
chr8 (7-182)||(41260566-41260741)
chr8 (42-182)||(5731117-5731258)
chr8 (42-182)||(9796826-9796967)
chr8 (42-182)||(34799388-34799529)
chr8 (45-169)||(35694188-35694313)
chr8 (7-184)||(42036074-42036252)
chr8 (42-172)||(35427127-35427258)
chr8 (42-182)||(28254731-28254872)
chr8 (42-180)||(34799180-34799319)
chr8 (42-182)||(7910921-7911062)
chr8 (7-169)||(18049656-18049819)
chr8 (16-169)||(28254500-28254654)
chr8 (45-172)||(18049906-18050034)
chr8 (7-162)||(18428086-18428242)
chr8 (16-169)||(9797044-9797198)
chr8 (42-169)||(16578414-16578542)
chr8 (46-169)||(42035876-42036000)
chr8 (7-182)||(6115415-6115591)
chr8 (46-169)||(2208819-2208943)
chr8 (61-144)||(35163817-35163901)
chr8 (42-168)||(16578208-16578336)
chr8 (7-137)||(26252875-26253005)
chr8 (42-169)||(599816-599944)
chr8 (42-169)||(15256151-15256274)
chr8 (46-160)||(35426917-35427032)
chr8 (45-169)||(5730920-5731044)
chr8 (63-169)||(7910738-7910845)
chr8 (96-180)||(41260416-41260500)
chr8 (72-180)||(13224770-13224879)
chr8 (72-180)||(33328288-33328397)
chr8 (110-150)||(9929993-9930033)
chr8 (118-182)||(15256010-15256074)
chr8 (72-143)||(19176633-19176705)
chr8 (72-142)||(4630136-4630207)
chr8 (45-143)||(28877234-28877332)
chr8 (110-180)||(9177942-9178012)
chr8 (110-180)||(28877072-28877142)
chr8 (72-180)||(12571994-12572103)
chr8 (60-143)||(18805280-18805364)
chr8 (112-143)||(31133391-31133422)
chr8 (110-165)||(33743100-33743155)
chr8 (110-143)||(11656790-11656823)
chr8 (110-143)||(13224972-13225005)
chr8 (110-143)||(41681467-41681500)
[»] chr6 (36 HSPs)
chr6 (7-172)||(31574040-31574205)
chr6 (55-182)||(29891193-29891321)
chr6 (42-172)||(31073457-31073588)
chr6 (42-180)||(31573825-31573964)
chr6 (7-169)||(25472330-25472493)
chr6 (42-169)||(24640503-24640631)
chr6 (42-169)||(28636515-28636642)
chr6 (42-169)||(29891398-29891526)
chr6 (42-169)||(5114568-5114696)
chr6 (44-143)||(30251035-30251135)
chr6 (42-150)||(25468951-25469060)
chr6 (61-172)||(30250810-30250922)
chr6 (42-143)||(31073250-31073342)
chr6 (107-172)||(5114783-5114848)
chr6 (42-180)||(35163493-35163631)
chr6 (110-180)||(11276888-11276958)
chr6 (7-94)||(5120863-5120949)
chr6 (72-180)||(10900236-10900345)
chr6 (72-180)||(28472766-28472875)
chr6 (72-143)||(29859955-29860027)
chr6 (65-143)||(10900063-10900141)
chr6 (110-180)||(2322525-2322595)
chr6 (110-180)||(15827947-15828017)
chr6 (110-180)||(18505225-18505295)
chr6 (42-162)||(11523786-11523905)
chr6 (111-143)||(23074158-23074190)
chr6 (42-86)||(28636391-28636435)
chr6 (65-143)||(11276714-11276792)
chr6 (110-180)||(12935463-12935533)
chr6 (42-143)||(32836341-32836442)
chr6 (110-143)||(2319850-2319883)
chr6 (110-143)||(11445156-11445189)
chr6 (110-143)||(12935336-12935369)
chr6 (110-143)||(18505098-18505131)
chr6 (72-180)||(20741230-20741339)
chr6 (111-143)||(18257307-18257339)
[»] scaffold0097 (2 HSPs)
scaffold0097 (7-182)||(46332-46508)
scaffold0097 (44-169)||(46585-46711)
[»] chr5 (56 HSPs)
chr5 (7-182)||(18150028-18150204)
chr5 (43-182)||(28289785-28289925)
chr5 (46-182)||(21371001-21371138)
chr5 (42-169)||(28289962-28290090)
chr5 (42-182)||(38900744-38900883)
chr5 (42-182)||(15115400-15115541)
chr5 (42-169)||(8418939-8419067)
chr5 (42-169)||(22651445-22651573)
chr5 (7-169)||(19291422-19291584)
chr5 (42-169)||(5161683-5161811)
chr5 (42-169)||(15029627-15029755)
chr5 (44-182)||(14340713-14340851)
chr5 (42-143)||(32697567-32697669)
chr5 (42-169)||(4967087-4967215)
chr5 (42-169)||(39083460-39083588)
chr5 (7-169)||(4966882-4967043)
chr5 (73-169)||(22651663-22651760)
chr5 (42-180)||(38900949-38901086)
chr5 (95-183)||(5161882-5161970)
chr5 (42-169)||(14340480-14340608)
chr5 (65-162)||(32697458-32697557)
chr5 (46-169)||(21370798-21370924)
chr5 (42-180)||(28495148-28495286)
chr5 (110-180)||(16018756-16018826)
chr5 (85-169)||(18149866-18149951)
chr5 (111-167)||(27307240-27307296)
chr5 (110-180)||(164497-164567)
chr5 (110-180)||(2865061-2865131)
chr5 (110-180)||(8461099-8461169)
chr5 (110-180)||(24331866-24331936)
chr5 (110-143)||(5819272-5819305)
chr5 (110-143)||(14463756-14463789)
chr5 (110-143)||(19359305-19359338)
chr5 (110-143)||(24325554-24325587)
chr5 (110-143)||(24362179-24362212)
chr5 (72-143)||(15709100-15709172)
chr5 (110-162)||(19359450-19359502)
chr5 (110-162)||(24331740-24331792)
chr5 (112-180)||(25000261-25000329)
chr5 (107-143)||(28495019-28495055)
chr5 (110-180)||(18183275-18183345)
chr5 (110-143)||(164369-164402)
chr5 (110-143)||(2864933-2864966)
chr5 (110-143)||(5819108-5819141)
chr5 (110-143)||(8647771-8647804)
chr5 (110-143)||(14215586-14215619)
chr5 (110-143)||(16018920-16018953)
chr5 (110-143)||(24325390-24325423)
chr5 (110-143)||(24362015-24362048)
chr5 (110-143)||(25000422-25000455)
chr5 (60-135)||(27307410-27307486)
chr5 (111-143)||(8647608-8647640)
chr5 (115-143)||(14463872-14463900)
chr5 (111-143)||(16752904-16752936)
chr5 (112-168)||(20265846-20265902)
chr5 (112-180)||(29455048-29455116)
[»] chr4 (76 HSPs)
chr4 (42-172)||(28465181-28465312)
chr4 (42-182)||(14439928-14440069)
chr4 (7-182)||(24851770-24851946)
chr4 (19-182)||(34789687-34789851)
chr4 (7-162)||(34807182-34807338)
chr4 (42-182)||(12593328-12593469)
chr4 (7-169)||(46736973-46737135)
chr4 (42-182)||(54440669-54440810)
chr4 (42-169)||(14440146-14440274)
chr4 (42-172)||(21034551-21034682)
chr4 (46-182)||(55677262-55677399)
chr4 (42-164)||(41608475-41608598)
chr4 (42-180)||(54440876-54441015)
chr4 (42-183)||(36168432-36168574)
chr4 (42-182)||(46736755-46736896)
chr4 (42-169)||(34789482-34789610)
chr4 (42-169)||(35643667-35643795)
chr4 (42-169)||(45838865-45838993)
chr4 (42-169)||(56077642-56077770)
chr4 (43-169)||(21034337-21034464)
chr4 (42-169)||(34807457-34807585)
chr4 (42-168)||(24851565-24851692)
chr4 (42-136)||(33689928-33690023)
chr4 (7-182)||(45838613-45838788)
chr4 (46-169)||(28465399-28465523)
chr4 (43-169)||(26974385-26974512)
chr4 (42-143)||(16214839-16214941)
chr4 (44-169)||(18965454-18965580)
chr4 (42-182)||(35643872-35644004)
chr4 (45-169)||(36168649-36168774)
chr4 (62-143)||(6616793-6616875)
chr4 (85-182)||(33777927-33778025)
chr4 (42-126)||(41114259-41114344)
chr4 (63-169)||(229282-229389)
chr4 (7-182)||(35193374-35193548)
chr4 (96-172)||(56077522-56077598)
chr4 (42-167)||(17504074-17504199)
chr4 (42-143)||(19529037-19529139)
chr4 (42-143)||(28166104-28166206)
chr4 (95-169)||(33777776-33777850)
chr4 (61-168)||(24335880-24335986)
chr4 (42-169)||(229477-229605)
chr4 (95-182)||(6616977-6617064)
chr4 (46-180)||(12593128-12593262)
chr4 (107-182)||(26974589-26974664)
chr4 (7-104)||(19528935-19529033)
chr4 (69-179)||(17504267-17504378)
chr4 (42-162)||(18965240-18965357)
chr4 (72-143)||(22434521-22434593)
chr4 (110-154)||(51020966-51021010)
chr4 (110-180)||(11153453-11153523)
chr4 (110-180)||(12234498-12234568)
chr4 (110-180)||(18751908-18751978)
chr4 (110-180)||(46193711-46193781)
chr4 (110-143)||(2118639-2118672)
chr4 (72-180)||(12503742-12503851)
chr4 (72-180)||(25937800-25937909)
chr4 (72-143)||(15523577-15523649)
chr4 (112-180)||(23494614-23494682)
chr4 (107-143)||(54995411-54995447)
chr4 (63-169)||(24336081-24336188)
chr4 (110-180)||(4219726-4219796)
chr4 (19-70)||(26974662-26974713)
chr4 (110-180)||(40160262-40160332)
chr4 (110-143)||(4219892-4219925)
chr4 (110-143)||(11153325-11153358)
chr4 (110-143)||(15523414-15523447)
chr4 (110-143)||(20470844-20470877)
chr4 (110-143)||(22434358-22434391)
chr4 (110-143)||(23494776-23494809)
chr4 (110-143)||(40160425-40160458)
chr4 (110-143)||(45082757-45082790)
chr4 (110-143)||(46193584-46193617)
chr4 (110-143)||(51021129-51021162)
chr4 (111-179)||(10795497-10795564)
chr4 (111-143)||(25938004-25938036)
[»] chr7 (61 HSPs)
chr7 (42-182)||(7732588-7732729)
chr7 (7-182)||(25637263-25637439)
chr7 (7-182)||(28687805-28687979)
chr7 (42-182)||(11973707-11973848)
chr7 (42-182)||(27245304-27245445)
chr7 (7-182)||(26026383-26026559)
chr7 (7-182)||(35161106-35161282)
chr7 (42-182)||(5745739-5745880)
chr7 (46-182)||(5745944-5746081)
chr7 (42-182)||(26048252-26048393)
chr7 (42-169)||(48247691-48247819)
chr7 (44-182)||(787087-787226)
chr7 (42-182)||(16081604-16081745)
chr7 (42-169)||(25637516-25637644)
chr7 (7-169)||(48247909-48248072)
chr7 (43-143)||(9181753-9181854)
chr7 (44-162)||(15712467-15712586)
chr7 (46-180)||(27245511-27245646)
chr7 (42-169)||(16081399-16081527)
chr7 (42-172)||(2758013-2758144)
chr7 (42-180)||(26026625-26026764)
chr7 (42-150)||(24929640-24929749)
chr7 (42-169)||(14311605-14311733)
chr7 (43-169)||(11971439-11971566)
chr7 (61-143)||(26048067-26048150)
chr7 (42-143)||(786883-786985)
chr7 (63-143)||(34595116-34595197)
chr7 (7-143)||(39388610-39388748)
chr7 (42-125)||(9181632-9181716)
chr7 (7-183)||(5333946-5334112)
chr7 (42-169)||(33880903-33881030)
chr7 (16-122)||(14311390-14311497)
chr7 (61-169)||(34594701-34594810)
chr7 (46-169)||(7732806-7732929)
chr7 (46-169)||(35160906-35161029)
chr7 (95-169)||(5334188-5334262)
chr7 (42-94)||(28687693-28687745)
chr7 (42-182)||(9394037-9394176)
chr7 (60-180)||(35579016-35579137)
chr7 (75-169)||(33880753-33880847)
chr7 (110-180)||(29100157-29100227)
chr7 (42-154)||(35579219-35579331)
chr7 (110-180)||(4478007-4478077)
chr7 (110-180)||(19590694-19590764)
chr7 (95-180)||(4641594-4641679)
chr7 (109-150)||(5184548-5184589)
chr7 (107-180)||(34534097-34534170)
chr7 (72-143)||(2659183-2659255)
chr7 (72-143)||(32004957-32005029)
chr7 (108-143)||(2659016-2659051)
chr7 (72-154)||(37786897-37786980)
chr7 (110-152)||(35289082-35289124)
chr7 (110-180)||(35289207-35289277)
chr7 (110-143)||(4477880-4477913)
chr7 (110-143)||(9393914-9393947)
chr7 (110-143)||(19590858-19590891)
chr7 (72-180)||(19830550-19830659)
chr7 (110-143)||(19830753-19830786)
chr7 (110-143)||(32004793-32004826)
chr7 (46-94)||(5184498-5184546)
chr7 (111-143)||(29100030-29100062)
[»] scaffold0712 (2 HSPs)
scaffold0712 (42-180)||(6492-6631)
scaffold0712 (55-179)||(6699-6824)
[»] scaffold0709 (2 HSPs)
scaffold0709 (42-180)||(6510-6649)
scaffold0709 (55-179)||(6717-6842)
[»] scaffold0025 (2 HSPs)
scaffold0025 (42-130)||(78417-78506)
scaffold0025 (126-182)||(84385-84441)
[»] scaffold0417 (1 HSPs)
scaffold0417 (110-180)||(10790-10860)
[»] scaffold0295 (1 HSPs)
scaffold0295 (110-180)||(4962-5032)
[»] scaffold0007 (1 HSPs)
scaffold0007 (42-143)||(205712-205813)
[»] scaffold0108 (1 HSPs)
scaffold0108 (110-169)||(15412-15471)
[»] scaffold0157 (1 HSPs)
scaffold0157 (72-180)||(16626-16735)
[»] scaffold0019 (1 HSPs)
scaffold0019 (72-180)||(133979-134088)
[»] scaffold0273 (2 HSPs)
scaffold0273 (110-180)||(4513-4583)
scaffold0273 (110-143)||(4382-4415)
[»] scaffold0432 (1 HSPs)
scaffold0432 (110-143)||(10216-10249)
[»] scaffold0027 (1 HSPs)
scaffold0027 (72-180)||(42465-42574)
[»] scaffold1223 (1 HSPs)
scaffold1223 (112-180)||(923-991)
[»] scaffold0176 (1 HSPs)
scaffold0176 (111-143)||(19003-19035)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 649593 - 649767
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccag 106  Q
    ||||| || |||||||||||||||||||       |||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  649593 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagttctgtctccctatttccaactccagaaacgcacataaatgacgttttagtccag 649691  T
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| |||||||||    
T  649692 ccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcaacacacaa 649767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 4808981 - 4809120
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataa 4809080  T
Q  143 attatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    || ||||| ||| ||||||| | ||||||| |||||||||    
T  4809081 atcatgtgggtacaaggaatctgctttgttcaacacacaa 4809120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 63404 - 63263
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||    
T  63404 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaagaaat 63305  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  63304 aaatcatgtgggtacaaggaatctactttgttcatcacacaa 63263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 16175830 - 16175668
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  16175830 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtcca 16175731  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactt 168  Q
     |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||    
T  16175730 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactt 16175668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 5560996 - 5560855
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 5560897  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||  ||| ||||||| ||||||||| | |||||||    
T  5560896 aaatcatgtaggtacaaggaatctactttgttcagcacacaa 5560855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 11540084 - 11539943
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11540084 gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaacaatgaaataaacaaggaat 11539985  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  11539984 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 11539943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 20128179 - 20128042
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20128179 ttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaat 20128080  T
Q  145 tatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||| ||| ||||||| ||||||||| | |||||||    
T  20128079 catgtgggtacaaggaatctactttgttcagcacacaa 20128042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 32418257 - 32418398
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgtttt-agtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||    
T  32418257 gcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgctcaaccatgaaataaacaatgaat 32418356  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||||||| ||||||| ||||||||| | |||||||    
T  32418357 aaatcatgtgagtacaaggaatctactttgttcagcacacaa 32418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 183
Target Start/End: Complemental strand, 42192723 - 42192546
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||||||||||| |||       |||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||    
T  42192723 tcgaacaaaatcgtccctaaactagatgtttttttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtcca 42192624  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaac 183  Q
     ||||||||||||||||||||||||||||||||||| |  ||||| ||| ||||||| ||||||||| | ||||||||    
T  42192623 accacctatgctcaaccatgaaataaacaaggaatagagcatgtgggtacaaggaatctactttgttcagcacacaac 42192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 4355821 - 4355996
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  4355821 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtcca 4355919  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||| || |||||| | |||||||    
T  4355920 accacctatgttcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctaatttgtttagcacacaa 4355996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 11539703 - 11539866
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  11539703 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtcca 11539802  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     ||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||    
T  11539803 accacctatgctcaaccatgaaataaacaatgaataaaacatgtgggtacaaggaatctacttt 11539866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 38008016 - 38008182
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  38008016 tcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatcca 38008115  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
     || ||||||||||||||||||||||||||||||||||| ||||| ||| || |||| |||||||||    
T  38008116 accgcctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaagaatgtactttgtt 38008182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 43160110 - 43160251
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||    
T  43160110 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgttcaaccatgaaataaacaaggaat 43160209  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  43160210 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 43160251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 33920678 - 33920843
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||| |||||||||||||||| | ||||||| |||||||||||    
T  33920678 tcgaacaaaatcgtccctaaactatatgattttt-gcagttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtcca 33920776  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||| |||||||||    
T  33920777 gccacctatgctcaaccatgaaataaacaaggaataaatcacgtgggtacaaggaatctactttgtt 33920843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 16953380 - 16953249
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  16953380 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgctcaaccatgaaataaacaaggaat 16953281  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||||||| |||||||||    
T  16953280 aaatcatgtgggtataaggaatctactttgtt 16953249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 63057 - 63185
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  63057 gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 63156  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||| ||| ||||||    
T  63157 aaaacatgtgggtacaagaaatctacttt 63185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 42192306 - 42192479
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  42192306 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtcca 42192404  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
     |||| ||||||||| ||||||||||||||||||||||  ||||| ||| ||||||| |||||| || |||||||    
T  42192405 accacatatgctcaatcatgaaataaacaaggaataaagcatgtgggtacaaggaatctactttattcaacacac 42192479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 43216155 - 43216014
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||  ||||||||||||||||||| ||||| |||||||  |||||||||| |||||||||||||||||||||||||||||| |||    
T  43216155 gcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaagaaat 43216056  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  43216055 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 43216014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 38008397 - 38008269
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38008397 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 38008298  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  38008297 aaaacatgtgggtacaaggaatctacttt 38008269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 20127802 - 20127965
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||| ||||||||||||| |||||||  ||||||||||    
T  20127802 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtcca 20127901  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     |||||||| |||||||||||||||||||| |||||||  ||||| ||||||||||| ||||||    
T  20127902 accacctatactcaaccatgaaataaacaaagaataaaacatgtgggtagaaggaatctacttt 20127965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 43160482 - 43160328
Alignment:
Q  16 atcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 114  Q
    ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| |||| ||| ||||    
T  43160482 atcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctat 43160383  T
Q  115 gctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    | |||||||||||||||||||||||||||| ||||| ||| || |||| ||||||    
T  43160382 gatcaaccatgaaataaacaaggaataaatcatgtgggtacaatgaatctacttt 43160328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 15551120 - 15550992
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| |  ||||||||||| |||| |||||||||||||||||||||||| ||||    
T  15551120 gcagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgctcaaccatgaaataaacaaagaat 15551021  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  15551020 aaaacatgtgggtacaaggaatctacttt 15550992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 44219744 - 44219872
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||||| ||||||||||||    
T  44219744 gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgctcaaccatgaagtaaacaaggaat 44219843  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  44219844 aaaacatgtgggtacaaggaatctacttt 44219872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 13399522 - 13399661
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||| | |||  |||||| ||||||||||||||||||||||    
T  13399522 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtctaacca--tatgcttaaccatgaaataaacaaggaat 13399619  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| |||  |||||| ||||||||| | |||||||    
T  13399620 aaatcatgtgggtacgaggaatctactttgttcagcacacaa 13399661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 4809325 - 4809197
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||| || ||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  4809325 gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 4809226  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  4809225 aaaacatgtgggtacaaggaatctacttt 4809197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 13399866 - 13399738
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||| ||||||| | ||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||    
T  13399866 gcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgctcaaccatgaaataaacaaagaat 13399767  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  |||||  || ||||||| ||||||    
T  13399766 aaaacatgtggatacaaggaatctacttt 13399738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 33921057 - 33920930
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||    
T  33921057 gcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgctcaacc-tgaaataaacaaagaat 33920959  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  33920958 aaaacatgtgggtacaaggaatctacttt 33920930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 4356183 - 4356074
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||  ||||| ||| ||||    
T  4356183 cctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaagcatgaaataaacaaagaataaaacatgtgggtacaagg 4356084  T
Q  160 aatttacttt 169  Q
    ||| ||||||    
T  4356083 aatctacttt 4356074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 13315596 - 13315725
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaac-gcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaa 139  Q
    |||||||||||| ||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaa 13315695  T
Q  140 taaattatgtgagtagaaggaatttacttt 169  Q
    ||||  | ||| ||| ||||||| ||||||    
T  13315696 taaaacacgtgggtacaaggaatctacttt 13315725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 6949552 - 6949680
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  6949552 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatattcaaccatgaaataaacaaagaat 6949651  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| || |||| ||||||    
T  6949652 aaaacatgtgggtacaaagaatctacttt 6949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 44220089 - 44219962
Alignment:
Q  44 agttttagtcatatcttcc--tatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||| ||  |||||||||||||||||||| ||| ||||||   |||||||||| |||||||||||||||||| |||||||||||||||    
T  44220089 agttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgctcaaccataaaataaacaaggaat 44219990  T
Q  141 aaattatgtgagtagaaggaatttactt 168  Q
    |||| ||||| ||| ||||||| |||||    
T  44219989 aaatcatgtgggtaaaaggaatctactt 44219962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 16953040 - 16953131
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaa 135  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  16953040 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgctcaaccatgaaataaacaa 16953131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 17061011 - 17061102
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaa 135  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  17061011 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgctcaaccatgaaataaacaa 17061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 22445741 - 22445848
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||  ||||| ||||||| ||||| ||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgctcaaccatgaaataaacaaggaata 22445840  T
Q  142 aattatgt 149  Q
    ||| ||||    
T  22445841 aatcatgt 22445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 9330275 - 9330131
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||| ||||||||||       |||||||||||| ||||| ||||||| |||||  |||||| || | ||||||| |||||||||||    
T  9330275 tcgaacaaaatcgtccccaaactatatgtttttttgcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtcca 9330176  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtg 150  Q
     |||||||||||||||||||||||||||||| ||||||| |||||    
T  9330175 accacctatgctcaaccatgaaataaacaagaaataaatcatgtg 9330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 6949844 - 6949758
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacaca 181  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| | ||||||    
T  6949844 gttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagcacaca 6949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 43215809 - 43215911
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| ||||||| |||||||| ||||| | | ||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaagaat 43215908  T
Q  141 aaa 143  Q
    |||    
T  43215909 aaa 43215911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 15550739 - 15550905
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||| | ||||||| |||||||||||||||||| ||||||| |||||||| ||    
T  15550739 tcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttca 15550838  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
     |||  |||||||||| |||||||||| || ||| |||| ||||| ||| ||||| | |||||||||    
T  15550839 accatatatgctcaactatgaaataaataatgaacaaatcatgtgggtacaaggagtctactttgtt 15550905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 654409 - 654465
Alignment:
Q  220 ggggtgctgtaaatacacgaattcaacaactctaagccttttcttcaccttgaagag 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  654409 ggggtgctgtaaatacacgaattcaacaactctaagccttttcttcaccttgaagag 654465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 9329985 - 9330108
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| | |||||||||||| ||||||||||| ||||||| |||| |||| | |||| |||||||||||||||||||||||| |||||||     
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagtcaa-ccacttatgctcaaccatgaaataaacaaagaataaaa 9330083  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||| ||||| ||||||| ||||||    
T  9330084 catgcgagtacaaggaatctacttt 9330108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 28143475 - 28143355
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || | |||||||| |||||||||||||||| | ||||||| ||||||| ||  || |||||||||||||||||||||||||| ||||    
T  28143475 gcagttttagtccta-cgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaatgaat 28143377  T
Q  141 aaattatgtgagtagaaggaat 162  Q
    |||  ||||| ||| |||||||    
T  28143376 aaagcatgtgggtacaaggaat 28143355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 25336032 - 25335944
Alignment:
Q  63 tatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtg 150  Q
    ||||||||||| || |||  ||||||||||||  |||||||||| |||||||||||||| |||||||||| |||||||||||| |||||    
T  25336032 tatttccaactacaaaaattcacataaatgacacttttagtccaaccacctatgctcaatcatgaaataagcaaggaataaatcatgtg 25335944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 32418592 - 32418464
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||| || ||||| |||||||||||||| |||||||||          ||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  32418592 gcagttttaatcttatctccctatttccaactctagaaacgca----------gttttagtccaaccacctatgttcaaccatgaaataaacaaagaata 32418503  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||  || || ||| ||||||| |||||| || |||||||    
T  32418502 aaacatatgggtataaggaatctactttattcaacacac 32418464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 40027270 - 40027342
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  40027270 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 40027342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 239521 - 239554
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  239521 cctatgctcaaccatgaaataaacaaggaataaa 239554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 1978238 - 1978347
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || | ||||||||||||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  1978238 ctccaaaaacgcagagaaatgacagttttagacctaccccatatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 1978337  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  1978338 ttcaacacac 1978347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 22374490 - 22374559
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||| || ||||| ||||| || |||||||    
T  22374490 ctatgctcaactatgaaataaacaaggaataaagcatgtgggtacaaagaattcactttattcaacacac 22374559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 24140053 - 24140008
Alignment:
Q  98 ttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||    
T  24140053 ttagttcaaccacctatgctcaaccatgaagtaaacaaggaataaa 24140008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 24140125 - 24140068
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgtttt 99  Q
    |||||||||||  ||| | |||||||||||||||||||||||||| ||||||| ||||    
T  24140125 gcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttt 24140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 26538500 - 26538396
Alignment:
Q  65 tttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatt 163  Q
    |||| ||| ||||||||||| | ||||||| ||||||| ||  || |||||| |||||||||||||||||||||||||||  ||||| ||| || |||||    
T  26538500 tttcaaaccccagaaacgcagagaaatgacagttttagacctacc-cctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatt 26538402  T
Q  164 tacttt 169  Q
     |||||    
T  26538401 cacttt 26538396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 11090651 - 11090723
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||| |||||||||||||||||||||||||||    
T  11090651 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaa 11090723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 40815720 - 40815688
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||||||||||    
T  40815720 ctatgctcaaccatgaaataaacaaggaataaa 40815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 3025601 - 3025667
Alignment:
Q  78 aaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||| ||||||||||    
T  3025601 aaacgcaaagaaatgacagttttagacctaccccctatgctcaaccatgaaataaataaggaataaa 3025667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 43058502 - 43058572
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||| ||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  43058502 cctatgctcaatcatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 43058572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 7446514 - 7446547
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||| |||||||||||||||||||||||||||    
T  7446514 cctatgttcaaccatgaaataaacaaggaataaa 7446547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 18451246 - 18451137
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||| |||||||||||||| ||||||||||  ||||| ||| || ||||  |||||     
T  18451246 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgcttaaccatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 18451147  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  18451146 ttcaacacac 18451137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 22374691 - 22374658
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  22374691 cctatgctcaaccatgaaatcaacaaggaataaa 22374658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 28616980 - 28616947
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  28616980 cctatgctcaaccatgaaatcaacaaggaataaa 28616947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 40815524 - 40815557
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  40815524 cctatgctcaaccatgaaatcaacaaggaataaa 40815557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 43058699 - 43058666
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  43058699 cctatgctcaaccatgaaatcaacaaggaataaa 43058666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 1978474 - 1978442
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||| |||||||||||||    
T  1978474 ctatgctcaaccatgaaattaacaaggaataaa 1978442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 14432272 - 14432344
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||| ||||||||||||||||||||| ||||||    
T  14432272 ctccaaaaacgcagagaaatgacagttttagacctaccccctatactcaaccatgaaataaacaagaaataaa 14432344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 14941984 - 14941952
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||| ||||||||||||||||||    
T  14941984 ctatgctcaaccataaaataaacaaggaataaa 14941952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 1744401 - 1744568
Alignment:
Q  16 atcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 114  Q
    ||||||||||||||||||        |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  1744401 atcgtccctaaactatatatttttttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctat 1744500  T
Q  115 gctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||||||| ||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  1744501 actcaaccataaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagcacacaa 1744568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 4080122 - 4080262
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  4080122 cagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatgttcaaccatgaaataaacaaggaata 4080221  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| ||||| ||| ||||||||||||||||| | |||||||    
T  4080222 aatcatgtgggtacaaggaatttactttgttcagcacacaa 4080262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 1837605 - 1837747
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaat-aaacaaggaa 139  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  1837605 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaaacaaggaa 1837704  T
Q  140 taaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||||| | ||| ||| ||||||| ||||||||| | |||||||    
T  1837705 taaatcaagtgggtacaaggaatctactttgttcatcacacaa 1837747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 30786838 - 30787013
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| |||||||||||||||| ||||||||| |||||||| ||||||||||    
T  30786838 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtcca 30786936  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||| ||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  30786937 accacttatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagcacacaa 30787013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 37505514 - 37505373
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  37505514 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 37505415  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  37505414 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 37505373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 52335956 - 52335848
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  52335956 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaat 52335857  T
Q  141 aaattatgt 149  Q
    |||| ||||    
T  52335856 aaatcatgt 52335848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 16298748 - 16298923
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||||||||||  |||||||| ||||||||  |||||||||||    
T  16298748 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtcca 16298846  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  16298847 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagcacacaa 16298923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 10278614 - 10278790
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| || |||| ||||||||||||||||||||||||||  ||||||||||    
T  10278614 tcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtcca 10278713  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||||||||||||| ||||||||| |||||||||||| || || ||| ||||||| ||||||||| | |||||||    
T  10278714 accacctatgctcaactatgaaataagcaaggaataaatcatatgggtacaaggaatctactttgttcagcacacaa 10278790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 34555826 - 34555724
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34555727  T
Q  141 aaa 143  Q
    |||    
T  34555726 aaa 34555724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 37421262 - 37421388
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  37421262 gcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgctcaaccatgaaataaacaaggaat 37421361  T
Q  141 aaattatgtgagtagaaggaatttact 167  Q
    |||| ||||| ||| ||||||| ||||    
T  37421362 aaatcatgtgggtacaaggaatctact 37421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 443997 - 443856
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||| |||| |||||| |||||||||| ||||||||||| ||||||||||||||  ||||||||||||| ||||    
T  443997 gcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgctcaattatgaaataaacaaagaat 443898  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| |||||||||    
T  443897 aaatcatgtgggtacaaggaatctactttgttcaacacacaa 443856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 8230121 - 8229956
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||    
T  8230121 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtcca 8230023  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
     ||||||||| |||| |||||||||||||| |||||||  ||||| ||| ||||||| |||||||||    
T  8230022 accacctatgttcaatcatgaaataaacaaagaataaagcatgtgggtacaaggaatctactttgtt 8229956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 17641810 - 17641669
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||| |||||||||| ||||||||    
T  17641810 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctcaatcatgaaataatcaaggaat 17641711  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||  ||||| ||| ||| ||| ||||||||| | |||||||    
T  17641710 aaaccatgtgggtacaagaaatctactttgttcatcacacaa 17641669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 34555482 - 34555622
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||  |||||||| || |||| |||||| |||||||||||||||||||||||    
T  34555482 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgcttaaccatgaaataaacaaggaata 34555581  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| |||||  || ||||||| ||||||||| | |||||||    
T  34555582 aatcatgtggatacaaggaatctactttgttcagcacacaa 34555622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 44582157 - 44582297
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||   | |||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||||    
T  44582157 gcagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaatgaacaaggaat 44582256  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacaca 181  Q
    |||| ||||| ||| ||||||| ||||||||| | ||||||    
T  44582257 aaatcatgtgggtacaaggaatctactttgttcagcacaca 44582297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 23340283 - 23340414
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| | ||||||||||||||||||||| || ||||||| |||||||| || |||| |||||||||||||||||||||||| ||||    
T  23340283 gcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgctcaaccatgaaataaacaaagaat 23340382  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| |||||  || ||||||| |||||||||    
T  23340383 aaatcatgtggatacaaggaatctactttgtt 23340414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 50304882 - 50305013
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||| ||||||| |||| |||| ||||| |  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgctcaaccatgaaataaacaaggaat 50304981  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||||||| || |||| |||||||||    
T  50304982 aaatcatgtgagtacaaagaatctactttgtt 50305013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 17641467 - 17641593
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||    
T  17641467 agttttagttctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgttcaaccatgaaataaacaaggaataa 17641566  T
Q  143 attatgtgagtagaaggaatttacttt 169  Q
    |  ||| | ||| ||||||| ||||||    
T  17641567 aacatgcgggtacaaggaatctacttt 17641593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 9992601 - 9992460
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||  | ||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||    
T  9992601 gcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgctcaaccatgaaataaacaaggaat 9992502  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| |||| ||||    
T  9992501 aaatcatgtgggtacaaggaatctactttgttcaacaaacaa 9992460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 9992255 - 9992383
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||    
T  9992255 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgctcaaccatgaaataaacaaagaat 9992354  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| || |||| ||||||    
T  9992355 aaaacatgtgggtacaaagaatctacttt 9992383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 44954326 - 44954454
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||  || |||||||||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||| ||||||||||||    
T  44954326 gcagttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaagtaaacaaggaat 44954425  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  44954426 aaaacatgtgggtacaaggaatctacttt 44954454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 50305228 - 50305100
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| ||||||| |||||||| |||| |||||||||||| |||||| |||| | || |||||||||||||||||||||||||||||    
T  50305228 gcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgctcaaccatgaaataaacaaggaat 50305129  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    ||| ||||||  || ||||||| ||||||    
T  50305128 aaaatatgtggatacaaggaatctacttt 50305100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 8229740 - 8229879
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| | || ||||||||||||||||||||||||| |||    
T  8229740 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgctcaaccatgaaataaacaagaaat 8229839  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| || |||| |||||| || |||||||    
T  8229840 aaagcatgtgggtacaatgaatctactttattcaacacac 8229879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 44954672 - 44954541
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||| |||||||  |||    
T  44954672 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgctcaaccatgaagtaaacaataaat 44954573  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| | ||| ||| ||||||| || ||||||    
T  44954572 aaatcacgtgggtacaaggaatctattttgtt 44954541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 21938663 - 21938757
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaa 135  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21938663 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaa 21938757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 29021291 - 29021182
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||    
T  29021291 cctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaagg 29021192  T
Q  160 aatttacttt 169  Q
    ||| ||||||    
T  29021191 aatctacttt 29021182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 10278995 - 10278868
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| | ||| ||||||||||||||| |||| ||||||| ||||||||||| |||| |||| ||||||||||||||||||| |||||    
T  10278995 cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatgttcaaccatgaaataaacaaagaata 10278896  T
Q  142 aattatgtgagtagaaggaatttacttt 169  Q
    || |||||| ||| ||||||| ||||||    
T  10278895 aaatatgtgggtacaaggaatctacttt 10278868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 16299128 - 16298989
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| | |||||||||||||||||||||||| |||||||  ||||||| || |||||||| |||||||||||||||||||| ||||    
T  16299128 gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctatactcaaccatgaaataaacaaagaat 16299029  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  || || ||| ||||||| |||||| || |||||||    
T  16299028 aaaacatatgggtacaaggaatctactttattcaacacac 16298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 29438996 - 29439172
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||||||||||| |||       |||||||||||| |||||  |||||| ||| || | |||| |||| |||| || |||||||||||    
T  29438996 tcgaacaaaatcgtccctaaactaaatgtttttttgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtcca 29439095  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| || || ||| || |||| ||||||||| | |||||||    
T  29439096 accacctatgctcaaccatgaaataaacaaggaataaatcatatgggtacaaagaatctactttgttcatcacacaa 29439172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 6224800 - 6224886
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaa 128  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgctcaaccatgaaa 6224886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 37505133 - 37505307
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||| | ||||||| |||||||| ||| | ||| ||||||| |||||||||||    
T  37505133 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    || | ||||||||||||||||||||||||| |||||||  ||||||||| ||  ||| |||||| || |||||||    
T  37505233 gctatctatgctcaaccatgaaataaacaaagaataaaacatgtgagtacaaaaaatctactttattcaacacac 37505307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 9833579 - 9833470
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgacgtttt-agtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    ||||||| |||||||||||||||||| |||| || |||| |||||  ||||||||||||||| |||||||||||||||||||||  ||||| ||| ||||    
T  9833579 cctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgctcaactatgaaataaacaaggaataaaacatgtgggtacaagg 9833480  T
Q  160 aatttacttt 169  Q
    ||| ||||||    
T  9833479 aatatacttt 9833470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 50926332 - 50926453
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |  | |||||||| ||||||||||||| ||||||||||   ||||||||||| |||||||||||| ||||||||||||||||| |||    
T  50926332 gcagttttagtccttacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgctctaccatgaaataaacaagaaat 50926431  T
Q  141 aaattatgtgagtagaaggaat 162  Q
    |||  ||||| ||| |||||||    
T  50926432 aaagcatgtgggtacaaggaat 50926453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 44582504 - 44582401
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaa-cgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaa 139  Q
    |||||||||||| | ||| ||||||| || ||||| ||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||    
T  44582504 gcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaa 44582405  T
Q  140 taaa 143  Q
    ||||    
T  44582404 taaa 44582401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 30787214 - 30787090
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||| | ||||||| |||||||| ||| ||| | ||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||     
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgctcaaccatgaaataaacaaagaataaaa 30787115  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     |||||  || ||||||| ||||||    
T  30787114 catgtggatacaaggaatctacttt 30787090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 2868154 - 2868080
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatg 115  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||    
T  2868154 gcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 29020999 - 29021082
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||| || ||||| ||||||||||||||| | ||||||||||  ||  |||||||||||||||||||||||||||||||||    
T  29020999 cctattttcacctccaaaaacgcacataaatgtcagttttagtcctacccgctatgctcaaccatgaaataaacaaggaataaa 29021082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 23526777 - 23526859
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||| |||||||| ||||||||| |||||||  |||||| || ||| ||||||||||||||||||||| ||| |||||||    
T  23526777 cctattttcaactccaaaaacgcacagaaatgacagtttagtacaaccatctatgctcaaccatgaaataagcaatgaataaa 23526859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 50926668 - 50926566
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    ||||||| |||||||| |||| ||||||||||   ||||||||||| |||||||||||| ||||| ||||||||||| ||||||  ||||| ||| ||||    
T  50926668 cctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgctctaccataaaataaacaagaaataaagcatgtgggtacaagg 50926569  T
Q  160 aat 162  Q
    |||    
T  50926568 aat 50926566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 29869750 - 29869859
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||| || |||||| || ||||  |||||     
T  29869750 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaatcatatgagtacaaagaatccacttta 29869849  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  29869850 ttcaacacac 29869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 17088568 - 17088464
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgac-gttttagtcc-agccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaa 157  Q
    |||||||| ||| || ||||||||| | ||||||| ||||||| || | || ||||||||||||||||||||||||||||||||||  ||||| ||| ||    
T  17088568 tcctattttcaaatctagaaacgcagagaaatgacagttttagacctacccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaa 17088469  T
Q  158 ggaat 162  Q
    |||||    
T  17088468 ggaat 17088464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 39485131 - 39485266
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||| ||||| ||||||| || | | ||||| ||||||| ||     
T  39485131 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatct-cctattttcaacttcagaaacacagagagatgacagttttagacct 39485228  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
     || | ||||||||||||||||||||||||||||||||    
T  39485229 accccatatgctcaaccatgaaataaacaaggaataaa 39485266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 50970693 - 50970610
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagta 154  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  |||||||||    
T  50970693 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgagta 50970610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 5540195 - 5540125
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| || ||||  ||||| || |||||||    
T  5540195 cctatgctcaaccatgaaataaacaaggaataaaatatgtgggtacaaagaatccactttattcaacacac 5540125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 18984288 - 18984358
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||| ||||| || |||||||    
T  18984288 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaattcactttattcaacacac 18984358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 23526930 - 23526857
Alignment:
Q  96 ttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||| || ||| ||||| |||||||||||||||||||||||||||  ||||| ||| ||||||| ||||||    
T  23526930 ttttagtacaaccatctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaatctacttt 23526857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 44291404 - 44291504
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||||||| || ||| ||| ||| |||||||||||||| ||  |  |||||||||   |||||||||| |||||||||||||| |||||||||    
T  44291404 gcagttttagtcatacct-cctgttttcaaatccagaaacgcacaaaatagcagttttagtcgtaccacctatgcacaaccatgaaataagcaaggaata 44291502  T
Q  142 aa 143  Q
    ||    
T  44291503 aa 44291504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 2868011 - 2868075
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    |||||||||||||||| | ||||| || ||||||| ||||||||||||||||| |||||||||||    
T  2868011 gcagttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtcca 2868075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 17088268 - 17088352
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||| ||||| |||||| ||| | ||||| | ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  17088268 tcctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgctcaaccatgaaataaacaaggaataaa 17088352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 21856458 - 21856386
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  21856458 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 21856386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 29307363 - 29307285
Alignment:
Q  65 tttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||| ||||||||||||||| | ||||||| ||||||| ||  || |||||||||||||||||||| |||||||||||||    
T  29307363 tttcaaactccagaaacgcagagaaatgacagttttagacctacc-cctatgctcaaccatgaaatcaacaaggaataaa 29307285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 9019142 - 9019212
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  9019142 cctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccactttattcaacacac 9019212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 17433385 - 17433455
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  17433385 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 17433455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 39154188 - 39154258
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  39154188 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 39154258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 44291687 - 44291625
Alignment:
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||| || |||| ||||||    
T  44291687 ccacctatgttcaaccatgaaataaacaaggaataaagcatgtgggtaaaatgaatctacttt 44291625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 15173226 - 15173335
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||| |||||||||||||||||||  ||||| ||| || ||||  |||||     
T  15173226 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccaagaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 15173325  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  15173326 ttcaacacac 15173335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 17433581 - 17433548
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  17433581 cctatgctcaaccatgaaataaacaaggaataaa 17433548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 29307121 - 29307154
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  29307121 cctatgctcaaccatgaaataaacaaggaataaa 29307154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 5962993 - 5962921
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||||||||||||||| |||||||    
T  5962993 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaacgaataaa 5962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 17112460 - 17112512
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
    |||||||||||||||||||| |||||||||||||  ||||| | |||||||||    
T  17112460 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcagaaggaat 17112512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 21856221 - 21856273
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
    |||||||||||||||||||| |||||||||||||  ||||||| | |||||||    
T  21856221 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgagcacaaggaat 21856273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 4636108 - 4636211
Alignment:
Q  78 aaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaac 176  Q
    ||||||| | ||||||| ||||||| ||  || |||||| |||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||    
T  4636108 aaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaac 4636207  T
Q  177 acac 180  Q
    ||||    
T  4636208 acac 4636211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 9019384 - 9019306
Alignment:
Q  65 tttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||| ||| ||||||||||| | |||| || ||||||| || ||| |||||||||||||||||||| |||||||||||||    
T  9019384 tttcaaaccccagaaacgcagagaaataacagttttagacctgcc-cctatgctcaaccatgaaatcaacaaggaataaa 9019306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 8678918 - 8678848
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||| ||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  8678918 cctatgctcaaccataaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 8678848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 45048255 - 45048356
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || | ||||| |||||||||||||||| | |||| || ||||||| |   ||  ||||||||||||||||||||||||| ||||    
T  45048255 gcagttttagtcctacct-catattttcaactccagaaacgcatagaaataacagttttagacttaccctctatgctcaaccatgaaataaacaatgaat 45048353  T
Q  141 aaa 143  Q
    |||    
T  45048354 aaa 45048356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 5539995 - 5540028
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  5539995 cctatgctcaaccatgaaatcaacaaggaataaa 5540028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 18984485 - 18984452
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  18984485 cctatgctcaaccatgaaatcaacaaggaataaa 18984452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 26859436 - 26859403
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||| |||||||||||||||||||||||||||    
T  26859436 cctatgttcaaccatgaaataaacaaggaataaa 26859403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 29439323 - 29439286
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaa 132  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  29439323 gttttagtccaaccacctatgttcaaccatgaaataaa 29439286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 33144294 - 33144225
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||| |||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  33144294 ctatgcttaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 33144225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 39154386 - 39154353
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  39154386 cctatgctcaaccatgaaatcaacaaggaataaa 39154353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 49951992 - 49951851
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  49951992 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 49951893  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    | ||  |||| ||| || |||||||||||||| |||||||||    
T  49951892 atatcttgtgggtacaatgaatttactttgttcaacacacaa 49951851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 51828605 - 51828781
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  51828605 tcgaacaaaatcgtccgtaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtcca 51828704  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  51828705 accatctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatatactttgttcagcacacaa 51828781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 51828023 - 51828188
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       ||| |||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  51828023 tcgaacaaaatcgtccctaaactatatgtttttt-gcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtcca 51828121  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
     |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  51828122 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgtt 51828188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 40275540 - 40275397
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  40275540 gcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 40275441  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaact 184  Q
    |||  |||||  || ||||||| ||||||||| | |||||||||    
T  40275440 aaagcatgtggatacaaggaatctactttgttcagcacacaact 40275397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 49720471 - 49720602
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| | |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  49720471 gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 49720570  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||||||| |||||||||    
T  49720571 aaatcatgtgggtacaaggaatctactttgtt 49720602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 38535775 - 38535600
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||||||||||||||||||||||||||| || |||||||||||    
T  38535775 tcgaataaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtcca 38535677  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||| |||| |||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| | |||||||    
T  38535676 accacatatgttcaaccatgaaataaacaaggaataaataatgtgggtacaagaaatttactttgttcagcacacaa 38535600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 330282 - 330141
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||| |||| |||||||||||||||||| |||||||||| ||||    
T  330282 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgctcaaccataaaataaacaatgaat 330183  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| |||||||||    
T  330182 aaatcatgtgggtacaaggaatctactttgttcaacacacaa 330141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 14654637 - 14654496
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||    
T  14654637 gcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgctcaaccatgaaataaacaaggaat 14654538  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  14654537 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 14654496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 43678730 - 43678589
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||| |||||||||| ||||||||||||||    
T  43678730 gcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctatactcaaccatggaataaacaaggaat 43678631  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  43678630 aaatcatgtgggtataaggaatctactttgttcagcacacaa 43678589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 51472955 - 51473086
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaat 51473054  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||||||| |||||||||    
T  51473055 aaataatgtgggtacaaggaatctactttgtt 51473086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 46013903 - 46013740
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  46013903 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtcca 46013804  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     ||||||||||||||||||||||||||||| |||||||  ||||| ||| || |||| ||||||    
T  46013803 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttt 46013740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 2044373 - 2044502
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  2044373 agttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatgttcaactatgaaataaacaaggaataa 2044472  T
Q  143 attatgtgagtagaaggaatttactttgtt 172  Q
    || ||||| ||| ||||||| |||||||||    
T  2044473 atcatgtgggtacaaggaatctactttgtt 2044502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 25534991 - 25535100
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  25534991 gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 25535090  T
Q  141 aaattatgtg 150  Q
    |||| |||||    
T  25535091 aaatcatgtg 25535100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 32730489 - 32730630
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||| || ||||| |||||||||||||| ||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||||    
T  32730489 gcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgctcaaccatgaaataaacaaggaat 32730588  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  32730589 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 32730630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 46013522 - 46013663
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||    
T  46013522 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgctcaaccatgaaataaataaagaat 46013621  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| || |||| || |||||| | |||||||    
T  46013622 aaatcatgtgggtacaatgaatctattttgttcagcacacaa 46013663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 7 - 180
Target Start/End: Complemental strand, 51473336 - 51473162
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  51473336 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtcca 51473237  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
     ||||||||||||||||||||||||||||| |||||||  ||||| ||| || |||| |||||| || |||||||    
T  51473236 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaatgaatctactttattcaacacac 51473162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 52375777 - 52375635
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||||||   |||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||| |||||||    
T  52375777 gcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgctcaaccatgaaataaataaggaat 52375678  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaac 183  Q
    |||  ||||| ||| ||||||| ||||||||| | ||||||||    
T  52375677 aaagcatgtgggtacaaggaatctactttgttcagcacacaac 52375635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 44676572 - 44676713
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||| ||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  44676572 gcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtccagccttctatgctcaaccatgaaataaacaaggaat 44676671  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| || |||| ||||||||| | |||||||    
T  44676672 aaatcatgtgggtacaatgaatctactttgttcagcacacaa 44676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 43678395 - 43678523
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  43678395 gcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgctcaactatgaaataaacaaagaat 43678494  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  43678495 aaaacatgtgggtacaaggaatctacttt 43678523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 51828986 - 51828858
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  51828986 gcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 51828887  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  51828886 aaaacatgtgggtacaaggaatctacttt 51828858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 52236882 - 52237059
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||  ||||||| |||||||||||||||||| ||||||| |||||||||||    
T  52236882 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtcca 52236980  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaact 184  Q
      ||||||||||||||||||||||||||||||||||||  ||||| ||| ||| ||| || |||||| | |||||||||    
T  52236981 atcacctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaagaaatctattttgttcagcacacaact 52237059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 34104738 - 34104868
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgtttt-agtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||    
T  34104738 gcagttttagtcatatct-cctatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34104836  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||  ||||| ||| ||||||| |||||||||    
T  34104837 aaaacatgtgggtacaaggaatctactttgtt 34104868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 55390041 - 55389902
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||| || || |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  55390041 agttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccataaaataaacaaggaataa 55389942  T
Q  143 attatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    || ||||| ||| ||||||| |||||| || | |||||||    
T  55389941 atcatgtgggtacaaggaatctacttttttcagcacacaa 55389902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 40839132 - 40838970
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| |||||||||||    
T  40839132 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtcca 40839034  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     | || ||||||||||||||||||||||||||||||||  ||||| ||| ||||||| ||||||    
T  40839033 actacatatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaatctacttt 40838970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 51828403 - 51828275
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||| | ||||||| ||||||||||| | |||||||||||||||||||||| |||||||||    
T  51828403 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgctcaaccatgaaatacacaaggaat 51828304  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  51828303 aaaagatgtgggtacaaggaatctacttt 51828275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 34105094 - 34104963
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||  |||| | ||||||||||| |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  34105094 gcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34104995  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||  ||||| ||| ||||||| |||||||||    
T  34104994 aaaacatgtgggtacaaggaatctactttgtt 34104963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 40838752 - 40838883
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||  |||| |||||||||||||| ||||    
T  40838752 gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctataatcaaacatgaaataaacaaagaat 40838851  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||  ||||| ||| ||||||| |||||||||    
T  40838852 aaagcatgtgggtacaaggaatctactttgtt 40838883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 41998295 - 41998458
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||||||||| |||||||||||||||| ||||| ||| ||||||| |||||||||||    
T  41998295 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtcca 41998394  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     |||||||||||||||||||||||||||||  ||||||  ||||| ||| || |||| ||||||    
T  41998395 accacctatgctcaaccatgaaataaacaaataataaaacatgtgggtacaaagaatctacttt 41998458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 47431797 - 47431899
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  47431797 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 47431896  T
Q  141 aaa 143  Q
    |||    
T  47431897 aaa 47431899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 40275195 - 40275323
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| | |||||| ||||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  40275195 gcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaat 40275294  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||| ||| ||||||    
T  40275295 aaagcatgtgggtataagaaatctacttt 40275323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 49951650 - 49951774
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||| |||||||     
T  49951650 ttttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaataaaa 49951749  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||||| ||| ||||||| ||||||    
T  49951750 catgtgggtacaaggaatctacttt 49951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 50662858 - 50662730
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || ||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  50662858 gcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 50662759  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||   |||| ||| ||||||| ||||||    
T  50662758 aaaacgtgtgggtacaaggaatctacttt 50662730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 52375427 - 52375555
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  ||||| |||||||| ||||||||||||||| | ||||||| ||||||||| | |||| |||||||||||||||||||||||||||||    
T  52375427 gcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgctcaaccatgaaataaacaaggaat 52375526  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  52375527 aaagcatgtgggtacaaggaatctacttt 52375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 39010175 - 39010305
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||| |||| ||||||| |||||||| ||| ||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||     
T  39010175 gcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgctcaaccatgaaataaacaaggaac 39010273  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||||||| || ||||||    
T  39010274 aaataatgtgggtacaaggaatctaatttgtt 39010305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 32730835 - 32730741
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaa 135  Q
    ||||||||| || ||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  32730835 gcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaa 32730741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 44676914 - 44676790
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| |||||  |||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||| |||||||     
T  44676914 ttttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgctcaactatgaaataaacaaagaataaaa 44676815  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||||| |||  |||||| ||||||    
T  44676814 catgtgggtactaggaatctacttt 44676790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 30513822 - 30513915
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaa 135  Q
    |||||||||||||||||| | |||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  30513822 gcagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgctcaacca-gaaataaacaa 30513915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 52237263 - 52237161
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||| |||||| |||||||||| ||||||| ||||||||| | |||| |||| ||||||||||||||||||||||||    
T  52237263 gcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatgttcaaccatgaaataaacaaggaat 52237164  T
Q  141 aaa 143  Q
    |||    
T  52237163 aaa 52237161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 41998674 - 41998535
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || ||||||| |||||| ||||||| |||||| |||  | |||||| || |||||||||||||||||||||||||||||| |||    
T  41998674 gcagttttagtccta-ctccctattttcaactctagaaacgtacataa-tgatagatttagttcaaccacctatgctcaaccatgaaataaacaagtaat 41998577  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||||||||| ||| ||||||| ||||||||| | |||||||    
T  41998576 aaattatgtgggtacaaggaatctactttgttcagcacacaa 41998535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 43222517 - 43222618
Alignment:
Q  69 caactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttact 167  Q
    |||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| ||| ||| ||| ||||    
T  43222517 caactccagaaacgtacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaagaaatctact 43222616  T
Q  168 tt 169  Q
    ||    
T  43222617 tt 43222618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 43222808 - 43222707
Alignment:
Q  69 caactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttact 167  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||| ||| || |||| ||||    
T  43222808 caactccagaaacgcacaaaaatgacagttttagtccaaccacccatgttcaaccatgaaataaacaaggaataaagtatgtgggtacaaagaatctact 43222709  T
Q  168 tt 169  Q
    ||    
T  43222708 tt 43222707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 22370671 - 22370828
Alignment:
Q  16 atcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 114  Q
    |||||||||||||||||||       |||||||||||| ||||| | ||| |||||||||||||||||||| |||| || |||||||| ||  | | |||    
T  22370671 atcgtccctaaactatatgtttttttgcagttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagttcaatcgcttat 22370770  T
Q  115 gctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
    | |||||||| ||||||||||||||||||| ||||  ||| ||||||| |||||||||    
T  22370771 gttcaaccataaaataaacaaggaataaatcatgttggtacaaggaatctactttgtt 22370828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 2051399 - 2051490
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaa 132  Q
    ||||||||| || ||| | |||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  2051399 gcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgcttaaccatgaaataaa 2051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 14654309 - 14654419
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaag 158  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||| ||||| || |||||||||||||||||||| |||||||  ||||| ||  |||    
T  14654309 tcctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccaccaatactcaaccatgaaataaacaaagaataaaacatgtgggtgcaag 14654408  T
Q  159 gaatttacttt 169  Q
    |||| ||||||    
T  14654409 gaatctacttt 14654419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 16701235 - 16701133
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||| |||||||   |||| || ||||||||||| || | ||||| |||||||||||||||||| ||||    
T  16701235 gcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaaccccttatgcccaaccatgaaataaacaaagaat 16701136  T
Q  141 aaa 143  Q
    |||    
T  16701135 aaa 16701133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 27200137 - 27200016
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||||| || ||||||| |||||||||||||||| | ||||||| | ||||| ||  || | |||||||||||||||||||||||||||||    
T  27200137 gcagttttagtcatacct-cctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgctcaaccatgaaataaacaaggaat 27200039  T
Q  141 aaattatgtgagtagaaggaatt 163  Q
    |||| ||||| | | ||||||||    
T  27200038 aaatcatgtgggcacaaggaatt 27200016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 55389705 - 55389807
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||   | ||||| ||||| ||||||    
T  55389705 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctacccaatgaagtaaacgaggaat 55389804  T
Q  141 aaa 143  Q
    |||    
T  55389805 aaa 55389807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 55192235 - 55192319
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||| |||||||||||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  55192235 tcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 55192319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 49407897 - 49408034
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    |||||||||||||| || ||||||| |||||||| ||||||| | |||||||  |||||| ||  || |||||||| |||||||||||||||||||||||    
T  49407897 cagttttagtcatacct-cctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgctaaaccatgaaataaacaaggaata 49407995  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||  ||||| ||| |||||||  ||||| || |||||||    
T  49407996 aaacatgtgggtacaaggaatccactttattcaacacac 49408034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 49720807 - 49720689
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    |||||||||||| ||||| |||||||||||||||||||| | |||        ||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  49720807 gcagttttagtcttatctccctatttccaactccagaaatg-aca--------gttttggtccaaccacctatgctcaaccatgaaataaacaaagaata 49720717  T
Q  142 aattatgtgagtagaaggaatttacttt 169  Q
    ||  ||||| ||| ||||||| ||||||    
T  49720716 aaacatgtgggtacaaggaatctacttt 49720689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 329979 - 330064
Alignment:
Q  85 cataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    |||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  ||||| ||| ||||||| ||||||    
T  329979 cataaatgacagttttagtccaaccacttatgctcaaccatgaagtaaacaaggaataaaacatgtgcgtacaaggaatctacttt 330064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 39010465 - 39010395
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaattta 165  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||  ||||| ||| ||||||||||    
T  39010465 gttttagtccaaccacctatgctcaaccataaaataaacaaagaataaaacatgtgggtacaaggaattta 39010395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 36701541 - 36701421
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||||| || ||||||| ||||||||||||| || | ||||| | ||||||| ||  || | |||||||| | ||||||||||||||||||    
T  36701541 gcagttttagtcatacct-cctattttcaactccagaaacacatagaaatggcagttttagacctaccccatatgctcagctatgaaataaacaaggaat 36701443  T
Q  141 aaattatgtgagtagaaggaat 162  Q
    |||  ||||||||| |||||||    
T  36701442 aaagcatgtgagtacaaggaat 36701421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 27199820 - 27199904
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||| |||||| ||||||||| ||||||  | ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  27199820 tcctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 27199904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 41046830 - 41046938
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  ||||| ||| || |||| ||||||     
T  41046830 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatctacttta 41046929  T
Q  171 ttgaacaca 179  Q
    || ||||||    
T  41046930 ttcaacaca 41046938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 37075789 - 37075927
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || | ||||| |||||||||||||||| | ||||||| ||||||| ||  || |||||||||| |||||||||||| |||||||    
T  37075789 gcagttttagtcctacct-cttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgctcagccatgaaataaagaaggaat 37075887  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| || ||||  ||||| || |||||||    
T  37075888 aaagcatgtgggtacaatgaatccactttattcaacacac 37075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 38535409 - 38535470
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagt 102  Q
    ||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  38535409 gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagt 38535470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 5137110 - 5137182
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  5137110 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 5137182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 24300971 - 24300899
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  24300971 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 24300899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 26274943 - 26274871
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||||    
T  26274943 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacacaa 26274871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 39555992 - 39555920
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  39555992 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 39555920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 17464867 - 17464833
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||||||||||||||||||||||||||||||    
T  17464867 cctatgctcaaccatgaaataaacaaggaataaat 17464833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 26837732 - 26837662
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  26837732 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 26837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 30104617 - 30104683
Alignment:
Q  78 aaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  30104617 aaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 30104683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 37847265 - 37847164
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| ||||| |||||| ||| | |||||||  |||||| |   ||  ||||||||||||||||||||||||||||||    
T  37847265 gcagttttagtcctatct-cctattttcaacttcagaaatgcagagaaatgacaattttagacttacccactatgctcaaccatgaaataaacaaggaat 37847167  T
Q  141 aaa 143  Q
    |||    
T  37847166 aaa 37847164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 50900905 - 50900835
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||| || |||  ||||| ||| |||||||  ||||| ||||||||||    
T  50900905 cctatgctcaaccatgaaataaacaagaaagaaagcatgtgggtacaaggaatccactttattgaacacac 50900835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 8873869 - 8873902
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  8873869 cctatgctcaaccatgaaataaacaaggaataaa 8873902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 22425189 - 22425156
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  22425189 cctatgctcaaccatgaaataaacaaggaataaa 22425156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 23644631 - 23644664
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  23644631 cctatgctcaaccatgaaataaacaaggaataaa 23644664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 25853603 - 25853570
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  25853603 cctatgctcaaccatgaaataaacaaggaataaa 25853570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 33412383 - 33412350
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  33412383 cctatgctcaaccatgaaataaacaaggaataaa 33412350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 37076041 - 37076008
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  37076041 cctatgctcaaccatgaaataaacaaggaataaa 37076008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 2323748 - 2323696
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
    ||||||||||||||||||||||| ||| ||||||  ||||||||| |||||||    
T  2323748 cctatgctcaaccatgaaataaataagaaataaaacatgtgagtacaaggaat 2323696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 27393951 - 27393883
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  27393951 tatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 27393883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 29801587 - 29801655
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  29801587 tatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 29801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 37727059 - 37727131
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||||||||||||||| |||||||    
T  37727059 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaatgaataaa 37727131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 49408207 - 49408128
Alignment:
Q  64 atttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||| |||||||||||||||| | ||||| | ||||||| ||   ||||||||||||||||||||||||||||| ||||||    
T  49408207 attttcaactccagaaacgcaaagaaatggcagttttagacc-tacacctatgctcaaccatgaaataaacaagcaataaa 49408128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 50900715 - 50900767
Alignment:
Q  115 gctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttact 167  Q
    |||||||||||||||||||||||||||||  ||||| ||| ||||||| ||||    
T  50900715 gctcaaccatgaaataaacaaggaataaagcatgtgggtacaaggaatatact 50900767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 8874111 - 8874031
Alignment:
Q  62 ctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||| |||||||||||||||| | ||||||| ||||||| |   || |||||| |||||||||||||||||||||||||||    
T  8874111 ctattttcaactccagaaacgca-agaaatgacagttttagacttacc-cctatgttcaaccatgaaataaacaaggaataaa 8874031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 32535335 - 32535265
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||| |||||||| ||||||||||||||||||  ||||| ||| || ||||| ||||| || |||||||    
T  32535335 cctatgttcaaccataaaataaacaaggaataaagcatgtgggtacaaagaattcactttattcaacacac 32535265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 5137344 - 5137307
Alignment:
Q  113 atgctcaaccatgaaataaacaaggaataaattatgtg 150  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  5137344 atgctcaaccatgaaatcaacaaggaataaaatatgtg 5137307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 17464670 - 17464703
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  17464670 cctatgctcaaccatgaaatcaacaaggaataaa 17464703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 20840927 - 20840894
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  20840927 cctatgctcaaccatgaaatcaacaaggaataaa 20840894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 23644830 - 23644797
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  23644830 cctatgctcaaccatgaaatcaacaaggaataaa 23644797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 25853413 - 25853446
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  25853413 cctatgctcaaccatgaaatcaacaaggaataaa 25853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 31779028 - 31778995
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||| ||||||||||    
T  31779028 cctatgctcaaccatgaaataaataaggaataaa 31778995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 32535138 - 32535171
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  32535138 cctatgctcaaccatgaaatcaacaaggaataaa 32535171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 39555756 - 39555789
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  39555756 cctatgctcaaccatgaaatcaacaaggaataaa 39555789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 55087655 - 55087687
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| |||||||||||||||||||||||||||    
T  55087655 ctatgttcaaccatgaaataaacaaggaataaa 55087687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 35693971 - 35694111
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  35693971 cagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgctcaaccatgaaataaacaaggaata 35694070  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| ||||| ||| ||||||| ||||||||| | |||||||    
T  35694071 aatcatgtgggtacaaggaatctactttgttcatcacacaa 35694111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 599632 - 599773
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||||||||||||||    
T  599632 gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccacctacgcgcaaccatgaaataaacaaggaat 599731  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| | ||||||| | |||||||    
T  599732 aaatcatgtgggtacaaggaatcttctttgttcagcacacaa 599773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 41260741 - 41260566
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  41260741 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtcca 41260643  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||| ||||||||||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| | |||||||    
T  41260642 accacttatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaagaaatctactttgttcagcacacaa 41260566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 5731258 - 5731117
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5731258 gcagttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 5731159  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| || || ||| ||||||| ||||||||| | |||||||    
T  5731158 aaatcatatgggtacaaggaatctactttgttcagcacacaa 5731117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 9796826 - 9796967
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  9796826 gcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccataaaataaacaaggaat 9796925  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||  ||||||| ||||||||| | |||||||    
T  9796926 aaatcatgtgggtgcaaggaatctactttgttcagcacacaa 9796967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 34799529 - 34799388
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||| |    
T  34799529 gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgctcaaccatgaaataaacaaggact 34799430  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  34799429 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 34799388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 35694313 - 35694188
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  35694313 gttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaataaa 35694214  T
Q  144 ttatgtgagtagaaggaatttacttt 169  Q
     |||||| ||| ||||||| ||||||    
T  35694213 atatgtgggtacaaggaatctacttt 35694188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 42036252 - 42036074
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| |||  || |||||||||||||||||| ||||| ||||||| |||||||||||    
T  42036252 tcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttttagtcca 42036153  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaact 184  Q
     |||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||| | |||||||||    
T  42036152 accacctatactcaaccatgaaataaacaaggaataaagtatgtgagtacaagaaatctactttgttcagcacacaact 42036074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 35427258 - 35427127
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||  |||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  35427258 gcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 35427159  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||||||| |||||||||    
T  35427158 aaatcatgtgggtacaaggaatatactttgtt 35427127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 28254872 - 28254731
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||    
T  28254872 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaagaaacaaagaat 28254773  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||| ||| | |||||||    
T  28254772 aaatcatgtgggtacaaggaatctacttcgttcagcacacaa 28254731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 34799180 - 34799319
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||    
T  34799180 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34799279  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||||||| |||||| || |||||||    
T  34799280 aaagcatgtgggtataaggaatctactttattcaacacac 34799319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 7911062 - 7910921
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||   |||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  7911062 gcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 7910963  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||  ||||| ||| ||||||| ||||||||| | |||||||    
T  7910962 aaaacatgtgggtacaaggaatctactttgtttagcacacaa 7910921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 18049656 - 18049819
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| ||||    
T  18049656 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatcca 18049755  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     ||||||||||||||||||||||||||||| || ||||  ||||| ||| ||||||| ||||||    
T  18049756 accacctatgctcaaccatgaaataaacaaagattaaaacatgtgggtacaaggaatctacttt 18049819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 28254500 - 28254654
Alignment:
Q  16 atcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgtttt-agtccagccacctat 114  Q
    ||||||| |||||||||||       |||||||||||| ||||| |||||||||||||||||||||||| | ||||||| |||| |||||| ||||||||    
T  28254500 atcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctat 28254599  T
Q  115 gctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||    
T  28254600 gctcaaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctacttt 28254654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 18050034 - 18049906
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||| || ||||| ||||||| |||||||||||||||||| |||| || |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  18050034 gttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgctcaaccatgaaataaacaaggaataaa 18049935  T
Q  144 ttatgtgagtagaaggaatttactttgtt 172  Q
    | ||||| ||| ||||||| |||||||||    
T  18049934 tcatgtgggtacaaggaatctactttgtt 18049906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 18428242 - 18428086
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       ||||||||| || ||||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  18428242 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtcca 18428143  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
     ||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||    
T  18428142 accatctatgctcaaccatgaaataaacaaagaataaaacatgtgggtataaggaat 18428086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 9797198 - 9797044
Alignment:
Q  16 atcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 114  Q
    ||||||| |||||||||||       |||||||||||  ||||| |||||||||||||||| ||||||||| ||||||| ||||||||| | ||||||||    
T  9797198 atcgtccttaaactatatgtttttttgcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctat 9797099  T
Q  115 gctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||    
T  9797098 gctcaaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctacttt 9797044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 16578542 - 16578414
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||| | ||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||    
T  16578542 gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccgtgaaataaacaaagaat 16578443  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  16578442 aaaacatgtgggtacaaggaatctacttt 16578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 42035876 - 42036000
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||| ||||||| ||||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  42035876 ttttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaataaag 42035975  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||||| ||| ||||||| ||||||    
T  42035976 catgtgggtacaaggaatctacttt 42036000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 6115591 - 6115415
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       | |||||||||  ||||| | ||||| |||||| ||||||||||| ||||||| |||||||||||    
T  6115591 tcgaacaaaatcgtccctaaactatatgtttttttgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtcca 6115492  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||| ||||| |||||||||||||||||| |||||||| ||||||||| || |||| ||||||||| | |||||||    
T  6115491 accacttatgcccaaccatgaaataaacaacgaataaatcatgtgagtaaaatgaatctactttgttcagcacacaa 6115415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 2208819 - 2208943
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||||||||| ||||||| ||| |||||||||| ||| |||| |  ||||||||||| ||||||||||||||||||||||||||||| |||||||     
T  2208819 ttttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaa 2208918  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||||| ||| ||| ||||||||||    
T  2208919 catgtgggtacaagaaatttacttt 2208943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 35163817 - 35163901
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  35163817 cctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaat 35163901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 16578208 - 16578336
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac--gttttagtccagccacctatgctcaaccatgaaataaacaaggaa 139  Q
    |||||||| ||| ||||| |||||||||||||||||||||||| | |||  |   ||||||||||| ||| ||||||||||||||||||||||||||| |    
T  16578208 gcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgctcaaccatgaaataaacaaggta 16578307  T
Q  140 taaattatgtgagtagaaggaatttactt 168  Q
    ||||| ||||| ||| ||||||| |||||    
T  16578308 taaatcatgtgggtacaaggaatctactt 16578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 26252875 - 26253005
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||||||||||||||||||| || ||||||| | |||||||||    
T  26252875 tcgaacaaaatcgtccctaaactatatgttttgt-gcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacagatttagtcca 26252973  T
Q  106 gccacctatgctcaaccatgaaataaacaagg 137  Q
     |||||||| |||||| |||||||||||||||    
T  26252974 accacctatactcaacaatgaaataaacaagg 26253005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 599944 - 599816
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||  |||||||||| |||||||||||| | ||||||| ||||||||||| |||| |||||| |||||||||||||||||  |||    
T  599944 gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgctaaaccatgaaataaacaaaaaat 599845  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  599844 aaaacatgtgggtacaaggaatctacttt 599816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 15256274 - 15256151
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||| ||||     |||||||||||||||||||| ||||    
T  15256274 gcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccac-----ctcaaccatgaaataaacaaagaat 15256180  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  15256179 aaaacatgtgggtacaaggaatctacttt 15256151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 35426917 - 35427032
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    ||||| || ||||| |||||||||||||||| ||||||||| ||||||| ||||||||| | |||| ||||||||||||||||||||||||| ||||||     
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgctcaaccatgaaataaacaagaaataaaa 35427016  T
Q  145 tatgtgagtagaagga 160  Q
     ||||| ||| |||||    
T  35427017 catgtgggtataagga 35427032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 5730920 - 5731044
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||| || || |||||||  ||||||||||||| ||| ||||||| ||||||||| | | ||||||| ||||||||||||||||||| |||||||    
T  5730920 gttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtcaatc-acctatgttcaaccatgaaataaacaaagaataaa 5731018  T
Q  144 ttatgtgagtagaaggaatttacttt 169  Q
      ||||| ||| ||||||| ||||||    
T  5731019 acatgtgggtacaaggaatctacttt 5731044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 7910738 - 7910845
Alignment:
Q  63 tatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaa 161  Q
    |||||| ||||| ||||| ||||| ||||||| ||||||||| | |||| |||| |||||||||||||||||||||||||||  ||||| ||| || |||    
T  7910738 tatttctaactcaagaaatgcacagaaatgacagttttagtcaaaccacatatgttcaaccatgaaataaacaaggaataaagcatgtgggtataaagaa 7910837  T
Q  162 tttacttt 169  Q
    | ||||||    
T  7910838 tctacttt 7910845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 41260416 - 41260500
Alignment:
Q  96 ttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||  ||| | ||| ||| ||| |||||| || |||||||    
T  41260416 ttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaacatgcgggtacaagaaatctactttattcaacacac 41260500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 13224770 - 13224879
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  13224770 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 13224869  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  13224870 ttcaacacac 13224879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 33328288 - 33328397
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  33328288 ctccaaaaacgcaaagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 33328387  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  33328388 ttcaacacac 33328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 9930033 - 9929993
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtg 150  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  9930033 cctatgctcaaccatgaaataaacaaggaataaatcatgtg 9929993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 15256010 - 15256074
Alignment:
Q  118 caaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||||||||||||||||||| ||||||| ||||| ||| || |||| ||||||||| |||||||||    
T  15256010 caaccatgaaataaacaagtaataaatcatgtgggtacaaagaatctactttgttcaacacacaa 15256074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 19176705 - 19176633
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  ||||||||||||||||||||||||||||| |||||||    
T  19176705 ctccaaaaacgcagacaaatgacagttttagacctaccacctatgctcaaccatgaaataaacaaagaataaa 19176633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 4630207 - 4630136
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||||||||||||||||||||||    
T  4630207 ctccaaaaacgcagaaaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataa 4630136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 28877332 - 28877234
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||| || |||| |||||  ||||||||||||| | |||||||||  |||||| ||  || |||||||||||| |||||||||||||||||||||    
T  28877332 gttttagtcctaccttc-tatttttaactccagaaacgtatataaatgacaattttagacctacctcctatgctcaactatgaaataaacaaggaataaa 28877234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 9178012 - 9177942
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  9178012 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 9177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 28877072 - 28877142
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||| |||||||  ||||| || |||||||    
T  28877072 cctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaatcaactttattcaacacac 28877142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 12571994 - 12572103
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||| ||||||||||  ||||| ||| || ||||  |||||     
T  12571994 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaaaaaggaataaagcatgtgggtacaaagaatccacttta 12572093  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  12572094 ttcaacacac 12572103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 18805280 - 18805364
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||| | ||||||||||||| || | ||||||| ||||||| |   || ||||||| ||||||||||||||||||||||||||    
T  18805280 tcctatcttcaactccagaaacacagagaaatgacagttttagacttaccccctatgcacaaccatgaaataaacaaggaataaa 18805364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 143
Target Start/End: Original strand, 31133391 - 31133422
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||    
T  31133391 tatgctcaaccatgaaataaacaaggaataaa 31133422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 33743100 - 33743155
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaattta 165  Q
    |||||||||||||||||||| |||||||||||||  ||||| | | ||||||||||    
T  33743100 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaattta 33743155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 11656823 - 11656790
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  11656823 cctatgctcaaccatgaaatcaacaaggaataaa 11656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 13225005 - 13224972
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  13225005 cctatgctcaaccatgaaatcaacaaggaataaa 13224972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 41681500 - 41681467
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  41681500 cctatgctcaaccatgaaatcaacaaggaataaa 41681467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 31574205 - 31574040
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  31574205 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtcca 31574107  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
     |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  31574106 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgtt 31574040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 29891193 - 29891321
Alignment:
Q  55 tatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagt 153  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  29891193 tatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggt 29891292  T
Q  154 agaaggaatttactttgttgaacacacaa 182  Q
    | ||||||| ||||||||| | |||||||    
T  29891293 acaaggaatctactttgttcagcacacaa 29891321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 31073588 - 31073457
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  31073588 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaatgaat 31073489  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||| ||| |||||||||    
T  31073488 aaatcatgtgggtacaagaaatctactttgtt 31073457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 31573825 - 31573964
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  31573825 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 31573924  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||||||| |||||| || |||||||    
T  31573925 aaaacatgtgggtacaaggaatatactttattcaacacac 31573964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 25472493 - 25472330
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||| |||||||||||    
T  25472493 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtcca 25472394  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     ||||||||||||||||||||||||||||| |||||||  ||||| ||| || |||| ||||||    
T  25472393 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaatgaatctacttt 25472330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 24640631 - 24640503
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||  ||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  24640631 gcagttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgctcaaccatgaaataaacaaagaat 24640532  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    ||| |||||| ||| ||||||| ||||||    
T  24640531 aaaatatgtgggtacaaggaatctacttt 24640503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 28636642 - 28636515
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| || ||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa-aaagaat 28636544  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  28636543 aaaacatgtgggtataaggaatctacttt 28636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 29891526 - 29891398
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||  ||||||||||| |||||||| |||||||||||||||||||| ||||    
T  29891526 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatactcaaccatgaaataaacaaagaat 29891427  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  29891426 aaaacatgtgggtacaaggaatctacttt 29891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 5114568 - 5114696
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| |||||||| || ||||||||||||||||||||||||||||| ||||    
T  5114568 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgctcaaccatgaaataaacaaagaat 5114667  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  | ||| ||| ||||||| ||||||    
T  5114668 aaaacaggtgggtacaaggaatctacttt 5114696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 30251135 - 30251035
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||    
T  30251135 agttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctatcctcaaccatgaaataaacaaagaataa 30251036  T
Q  143 a 143  Q
    |    
T  30251035 a 30251035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 25468951 - 25469060
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||  || |||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||| |||    
T  25468951 gcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgctcaaccatgaaataaacaagaaat 25469050  T
Q  141 aaattatgtg 150  Q
    |||| |||||    
T  25469051 aaatcatgtg 25469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 30250810 - 30250922
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||| |||||||||||||| |||||||| ||||| ||| ||||    
T  30250810 cctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgctcaatcatgaaataaacaatgaataaatcatgtgggtacaagg 30250909  T
Q  160 aatttactttgtt 172  Q
    ||| |||||||||    
T  30250910 aatctactttgtt 30250922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 31073250 - 31073342
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||| |||||||| |||||||||||||||||||| |||||    
T  31073250 gcagttttagtcatatcttcctatttccaactccagaaacg-aca--------gttttagtccaaccacctatactcaaccatgaaataaacaaagaata 31073340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 5114848 - 5114783
Alignment:
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  5114848 ccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgtt 5114783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 35163631 - 35163493
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || ||||||| |||||||| |||| || | ||||||| ||||||| ||  || ||||||| |||||||||||||||||||||||    
T  35163631 gcagttttagtcctacct-cctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgcccaaccatgaaataaacaaggaat 35163533  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||| |||  ||||| || |||||||    
T  35163532 aaaacatgtgggtacaagaaatccactttattcaacacac 35163493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 11276958 - 11276888
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| || ||||  ||||| || |||||||    
T  11276958 cctatgctcaaccatgaaataaacaaggaataaagcatgtgagtacaaagaatccactttattcaacacac 11276888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 5120949 - 5120863
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 94  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  5120949 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgac 5120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 10900345 - 10900236
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  10900345 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 10900246  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  10900245 ttcaacacac 10900236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 28472766 - 28472875
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  28472766 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 28472865  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  28472866 ttcaacacac 28472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 29859955 - 29860027
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  29859955 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 29860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 10900063 - 10900141
Alignment:
Q  65 tttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||| ||||||||||||||| | ||||||| ||||||| ||  || |||||||||||||||||||| |||||||||||||    
T  10900063 tttcaaactccagaaacgcagagaaatgacagttttagacctacc-cctatgctcaaccatgaaatcaacaaggaataaa 10900141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 2322595 - 2322525
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  2322595 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 2322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 15828017 - 15827947
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  15828017 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 15827947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 18505295 - 18505225
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  18505295 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 18505225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 11523786 - 11523905
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || | ||||| |||||||| ||||||||| ||||  | ||| ||||||| |||| |||| |||||||||||||||| |||||||    
T  11523786 gcagttttagtcctacct-catattttcaactccataaacgcacaaaaattgcagttctagtccaaccac-tatgttcaaccatgaaataaataaggaat 11523883  T
Q  141 aaattatgtgagtagaaggaat 162  Q
    |||  ||||| ||| |||||||    
T  11523884 aaaacatgtgggtacaaggaat 11523905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 23074158 - 23074190
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||||||||||    
T  23074158 ctatgctcaaccatgaaataaacaaggaataaa 23074190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 28636391 - 28636435
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcaca 86  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||    
T  28636391 gcagttttagtcatatctccctatttccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 11276714 - 11276792
Alignment:
Q  65 tttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||| ||||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||||||||| |||||||||||||    
T  11276714 tttcaaactccaaaaacgcagagaaatgacagttttaggcctacc-cctatgctcaaccatgaaatcaacaaggaataaa 11276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 12935533 - 12935463
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||| ||||||||||||||||||| |||||||| | ||| ||| || ||||| ||||| || |||||||    
T  12935533 cctatgttcaaccatgaaataaacaacgaataaatcacgtgggtacaaagaattcactttattcaacacac 12935463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 32836442 - 32836341
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || |||| ||||| ||||| |||||||| | | |||| || ||||||| ||  || | ||||||||||||||||||||||||| |||    
T  32836442 gcagttttagtcctaccttc-tattttcaacttcagaaacgaagagaaataacagttttagacctaccccttatgctcaaccatgaaataaacaagaaat 32836344  T
Q  141 aaa 143  Q
    |||    
T  32836343 aaa 32836341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 2319850 - 2319883
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  2319850 cctatgctcaaccatgaaatcaacaaggaataaa 2319883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 11445156 - 11445189
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||| |||||||||||||||||||||||    
T  11445156 cctatgctcatccatgaaataaacaaggaataaa 11445189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 12935336 - 12935369
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  12935336 cctatgctcaaccatgaaatcaacaaggaataaa 12935369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 18505098 - 18505131
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  18505098 cctatgctcaaccatgaaatcaacaaggaataaa 18505131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 20741230 - 20741339
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||| | |||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  20741230 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgcttagccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 20741329  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  20741330 ttcaacacac 20741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 18257307 - 18257339
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||| |||||||||||||    
T  18257307 ctatgctcaaccatgaaattaacaaggaataaa 18257339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 46332 - 46508
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||| |||||||||||||||       |||||||||||||||||| ||||||||||| |||| ||| ||||| ||||||| |||||||||||    
T  46332 tcgaacaaaatcatccctaaactatatgtttttttgcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtcca 46431  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| | |||||||    
T  46432 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatttactttgtttagcacacaa 46508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 46711 - 46585
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||  ||||  |||||||||||||||| |||||||||||||||||  |||| ||||| |||||||||||||| |||||||||||||||||||||    
T  46711 agttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgctcaatcatgaaataaacaaggaataa 46612  T
Q  143 attatgtgagtagaaggaatttacttt 169  Q
    |  ||||| ||| ||||||| ||||||    
T  46611 aacatgtgggtacaaggaatctacttt 46585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 18150204 - 18150028
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||| |||||||||||||||       |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| ||    
T  18150204 tcgaacaaaatcatccctaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttca 18150105  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  18150104 accacctatgctcaaccataaaataaacaaggaataaatcatgtgggtataaggaatctactttgttcagcacacaa 18150028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 28289785 - 28289925
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  28289785 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaata 28289884  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| ||||| ||| || |||| ||||||||| | |||||||    
T  28289885 aatcatgtgggtacaaagaatctactttgttcagcacacaa 28289925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 21371138 - 21371001
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  21371138 ttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgctcaaccatgaaataaacaaggaataaat 21371039  T
Q  145 tatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||| ||| || |||| |||||| || | |||||||    
T  21371038 catgtgggtacaaagaatctactttattcagcacacaa 21371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 28290090 - 28289962
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  28290090 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgctcaaccatgaaataaacaaagaat 28289991  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  28289990 aaaacatgtgggtacaaggaatctacttt 28289962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 38900744 - 38900883
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    |||||||||||| ||||| |||||||||||||||| ||||| |||||||||||  || |||||| |||||||||||||||||||||||||||||||||||    
T  38900744 gcagttttagtcctatctccctatttccaactccataaacgtacataaatgacagtt-agtccaaccacctatgctcaaccatgaaataaacaaggaata 38900842  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| ||||| ||| ||||||| |||| |||| | |||||||    
T  38900843 aatcatgtgggtataaggaatctactctgttcatcacacaa 38900883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 15115541 - 15115400
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||  |||||||||||||| | ||||||||||||||||| |||||||| || |||| |||||||||||||||||||||||||||||    
T  15115541 gcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgctcaaccatgaaataaacaaggaat 15115442  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||  ||||| ||| ||||||| |||||| || | |||||||    
T  15115441 aaagcatgtgggtacaaggaatctactttatttagcacacaa 15115400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 8419067 - 8418939
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||||  ||||| ||||  |||||||||||||||||||||||||||||||||    
T  8419067 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgctcaaccatgaaataaacaaggaat 8418968  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  8418967 aaaacatgtgggtacaaggaatctacttt 8418939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 22651445 - 22651573
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || | ||||| |||||||||||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||| |||||||    
T  22651445 gcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgctcaaccatgaaataaataaggaat 22651544  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    ||| |||||| ||| ||||||| ||||||    
T  22651545 aaagtatgtgggtataaggaatctacttt 22651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 19291422 - 19291584
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| | |||||||||||||| ||||||||| ||||||| |||||||||||    
T  19291422 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtcca 19291521  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     |||||||||||||| |||||||||||||| ||||||| |||||| ||| ||| ||| ||||||    
T  19291522 accacctatgctcaatcatgaaataaacaa-gaataaaatatgtgggtacaagaaatctacttt 19291584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 5161683 - 5161811
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||||||||||||||||| || ||||||| | ||||||| |||||||| || ||||||||||||||||||||||||||||| ||||    
T  5161683 gcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagttttagttcaaccacctatgctcaaccatgaaataaacaaagaat 5161782  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| || |||| ||||||    
T  5161783 aaaacatgtgggtacaaagaatctacttt 5161811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 15029755 - 15029627
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||   |||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  15029755 gcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaagtaaacaaagaat 15029656  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| || |||| ||||||    
T  15029655 aaaacatgtgggtacaaagaatctacttt 15029627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 14340851 - 14340713
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||| ||||| | |||||||||||||| ||||| | | ||||||| ||||||||| | |||  |||||||||||||||||||||||||||||||    
T  14340851 agttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaaccatttatgctcaaccatgaaataaacaaggaataa 14340752  T
Q  143 attatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    || ||||| ||||||||||| ||||||||| | |||||||    
T  14340751 atcatgtg-gtagaaggaatctactttgttcagcacacaa 14340713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 32697669 - 32697567
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgt-tttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||| |||||||   ||||||||| ||||||||||||||||||||||||||||||||||    
T  32697669 gcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgctcaaccatgaaataaacaaggaat 32697570  T
Q  141 aaa 143  Q
    |||    
T  32697569 aaa 32697567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 4967215 - 4967087
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||| | |||||||| ||||| ||||||||||||||||||  ||||||||||| |||| ||||||||| |||||||||||||||||||    
T  4967215 gcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccacatatgctcaatcatgaaataaacaaggaat 4967116  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||| ||| ||||||    
T  4967115 aaagcatgtgggtacaagaaatctacttt 4967087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 39083460 - 39083588
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| | ||||||||||||||||||| |||| ||||||| |||||||||||  ||| ||||||||| ||||||||||||||  |||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgctcaatcatgaaataaacaaaaaat 39083559  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  39083560 aaaacatgtgggtacaaggaatctacttt 39083588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 4966882 - 4967043
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||  |||||||||||||| ||||| ||||| ||||||| ||||| | |||    
T  4966882 tcgaacaaaatcgtccctaaactatatgttttta-gcagttttagtcatatcc-cctatttccaactctagaaatgcacagaaatgacagttttgggcca 4966979  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||    
T  4966980 accacctatgctctaccatgaaataaacaaggaataaagcatctgggtacaaggaatctacttt 4967043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 22651760 - 22651663
Alignment:
Q  73 tccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||| ||| ||| ||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaataaggaataaagcatgtgagtacaagaaatctacttt 22651663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 38901086 - 38900949
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||| |||||| | ||||||||||  |||||||||||||||||||| ||||||||||| ||| |||   ||||||||||||||||||| ||||    
T  38901086 gcagttttagttatatctccttatttccaac--cagaaacgcacataaatgacagttttagtccaaccatctaatttcaaccatgaaataaacaaagaat 38900989  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| || |||| |||||| || |||||||    
T  38900988 aaaacatgtgggtacaaagaatctactttattcaacacac 38900949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 5161970 - 5161882
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaac 183  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| |||||| || | ||||||||    
T  5161970 gttttaatccaaccacctatgctcaaccatgaaataaataaggaataaatcatgtgggtacaaggaatctactttcttcagcacacaac 5161882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 14340480 - 14340608
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||| || |||||  ||||||||||||| ||||||  ||| ||||||| ||||||||||| |||| |||| ||||||||||||||||||| ||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatgttcaaccatgaaataaacaaagaat 14340579  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| || |||| ||||||    
T  14340580 aaaacatgtgggtacaaagaatctacttt 14340608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 32697458 - 32697557
Alignment:
Q  65 tttccaactccagaaacgcacataaatgacgt-tttagtccagccacctatgctcaac-catgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
    ||||||||||||||||| |||| |||||||   ||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||| ||| |||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgctcatctcatgaaataaacaaggaataaatcatgtgggtacaaggaat 32697557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 21370798 - 21370924
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgc--acataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||| ||||| |||||||||||||||||||||||  | | ||||| | ||||||||||  ||||||||| || ||||||||||||| || ||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccacctatgttctaccatgaaataaataaagaataa 21370897  T
Q  143 attatgtgagtagaaggaatttacttt 169  Q
    |  ||||| ||| ||||||| ||||||    
T  21370898 aacatgtgggtacaaggaatctacttt 21370924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 28495286 - 28495148
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || ||||||| ||||||||||| |||| | ||||||  ||||||| ||  || | |||||||||||||||||||||||||||||    
T  28495286 gcagttttagtcctacct-cctattttcaactccagaaccgcagagaaatgatagttttagacctacctcatatgctcaaccatgaaataaacaaggaat 28495188  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| |||||||  ||||| || |||||||    
T  28495187 aaaacatgtgggtacaaggaatccactttattaaacacac 28495148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 16018756 - 16018826
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||| ||||| || |||||||    
T  16018756 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaattcactttattcaacacac 16018826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 18149866 - 18149951
Alignment:
Q  85 cataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||||||| |||||||  ||||| ||| || |||| ||||||    
T  18149866 cataaatgacagttttagtctaaccacttatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaatgaatctacttt 18149951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 27307240 - 27307296
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttact 167  Q
    |||||||||||||||||||||||||||||||||  ||||||||| || |||| ||||    
T  27307240 ctatgctcaaccatgaaataaacaaggaataaagcatgtgagtacaatgaatctact 27307296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 164567 - 164497
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  164567 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 164497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 2865131 - 2865061
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  2865131 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 2865061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 8461099 - 8461169
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  8461099 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 8461169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 24331936 - 24331866
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  24331936 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 24331866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 5819305 - 5819272
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  5819305 cctatgctcaaccatgaaataaacaaggaataaa 5819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 14463756 - 14463789
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  14463756 cctatgctcaaccatgaaataaacaaggaataaa 14463789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 19359305 - 19359338
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  19359305 cctatgctcaaccatgaaataaacaaggaataaa 19359338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 24325587 - 24325554
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  24325587 cctatgctcaaccatgaaataaacaaggaataaa 24325554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 24362212 - 24362179
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  24362212 cctatgctcaaccatgaaataaacaaggaataaa 24362179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 15709100 - 15709172
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||| ||||||    
T  15709100 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaagaaataaa 15709172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 19359502 - 19359450
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||| |||||||    
T  19359502 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggtacaaggaat 19359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 24331740 - 24331792
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
    |||||||||||||||||||| |||||||||||||  ||||||| | |||||||    
T  24331740 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgagcacaaggaat 24331792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 25000261 - 25000329
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  25000261 tatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 25000329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 28495019 - 28495055
Alignment:
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||||||| ||||||    
T  28495019 ccacctatgctcaaccatgaaataaacaagaaataaa 28495055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 18183345 - 18183275
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  18183345 cctatgctcaaccatgaaataaacagggaataaagcatgtgggtacaaagaatccactttattcaacacac 18183275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 164369 - 164402
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  164369 cctatgctcaaccatgaaatgaacaaggaataaa 164402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 2864933 - 2864966
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  2864933 cctatgctcaaccatgaaatcaacaaggaataaa 2864966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 5819108 - 5819141
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  5819108 cctatgctcaaccatgaaatcaacaaggaataaa 5819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 8647804 - 8647771
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  8647804 cctatgctcaaccatgaaatcaacaaggaataaa 8647771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 14215619 - 14215586
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||| |||||||||||||||||||||||||||||    
T  14215619 cctaagctcaaccatgaaataaacaaggaataaa 14215586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 16018953 - 16018920
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  16018953 cctatgctcaaccatgaaatcaacaaggaataaa 16018920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 24325390 - 24325423
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  24325390 cctatgctcaaccatgaaatcaacaaggaataaa 24325423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 24362015 - 24362048
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  24362015 cctatgctcaaccatgaaatcaacaaggaataaa 24362048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 25000455 - 25000422
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  25000455 cctatgctcaaccatgaaatcaacaaggaataaa 25000422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 27307486 - 27307410
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgacgtttt-ag-tccagccacctatgctcaaccatgaaataaacaa 135  Q
    |||||||| |||||||||||| ||| | ||||||| |||| || |||| || ||||||||||||||||||||||||||    
T  27307486 tcctattttcaactccagaaatgcagagaaatgacatttttagatccaccc-cctatgctcaaccatgaaataaacaa 27307410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 8647608 - 8647640
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||| |||||||||||||||||||||||    
T  8647608 ctatgctcatccatgaaataaacaaggaataaa 8647640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 143
Target Start/End: Complemental strand, 14463900 - 14463872
Alignment:
Q  115 gctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||||||    
T  14463900 gctcaaccatgaaataaacaaggaataaa 14463872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 16752936 - 16752904
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||| ||||||    
T  16752936 ctatgctcaaccatgaaataaacaagaaataaa 16752904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 20265846 - 20265902
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactt 168  Q
    |||||| ||||||||||||||||||||||||| | || | ||| ||||||| |||||    
T  20265846 tatgcttaaccatgaaataaacaaggaataaagtgtgcgggtacaaggaatctactt 20265902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 29455116 - 29455048
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  29455116 tatgctcaaccatgaaataaataaggaataaagcatgtgggtacaaagaatccactttattcaacacac 29455048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 28465181 - 28465312
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  28465181 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 28465280  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||  ||||| ||| ||||||| |||||||||    
T  28465281 aaaacatgtgggtacaaggaatctactttgtt 28465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 14439928 - 14440069
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  14439928 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 14440027  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| || || ||| ||||||| ||||||||| | |||||||    
T  14440028 aaatcatatgggtacaaggaatctactttgttcagcacacaa 14440069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 24851946 - 24851770
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| |||||| ||||||||||||||||||||||||| ||||||  |||||||| ||    
T  24851946 tcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtaca 24851847  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||| ||||||||| | |||||||    
T  24851846 accacctatgctcaaccatgaaataaacaaggaataaatcatgttggtacaaggaatctactttgttcagcacacaa 24851770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 34789851 - 34789687
Alignment:
Q  19 gtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 117  Q
    ||||||||||||||||       |||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  34789851 gtccctaaactatatgtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T
Q  118 caaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||||| | |||||||    
T  34789751 caaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctactttgttcagcacacaa 34789687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 34807182 - 34807338
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||| ||||||       |||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  34807182 tcgaacaaaatcgtccctaaagtatatgtttttttgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtcca 34807281  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaat 162  Q
     |||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||    
T  34807282 accacctatgctcaaccatgaaatagacaaggaataaatcatgtgggtacaaggaat 34807338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 12593469 - 12593328
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||  |||||| ||||||||||| |||| ||||||||||||||||||||| |||||||    
T  12593469 gcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgctcaaccatgaaataaataaggaat 12593370  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| |||||||||    
T  12593369 aaatcatgtgggtacaaggaatctactttgttcaacacacaa 12593328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 46737135 - 46736973
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  46737135 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtcca 46737037  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     ||||||||||| ||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||    
T  46737036 accacctatgctaaaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctacttt 46736973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 54440669 - 54440810
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| ||||| |||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  54440669 gcagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 54440768  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  54440769 aaatcatgtgggtacaaggaatctactttgttcagcacacaa 54440810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 14440274 - 14440146
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14440274 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 14440175  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  14440174 aaaacatgtgggtacaaggaatctacttt 14440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 21034682 - 21034551
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  21034682 gcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaatgaacaaggaat 21034583  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    |||| ||||| ||| ||||||| |||||||||    
T  21034582 aaatcatgtgggtacaaggaatctactttgtt 21034551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 55677399 - 55677262
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  55677399 ttttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgctcaaccatgaaataaacaaggaataaat 55677300  T
Q  145 tatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||| ||| ||  ||| ||||||||| | |||||||    
T  55677299 catgtgggtacaaaaaatctactttgttcagcacacaa 55677262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 41608475 - 41608598
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| | ||||||||||| || ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 41608574  T
Q  141 aaattatgtgagtagaaggaattt 164  Q
    |||| ||||| ||| |||||||||    
T  41608575 aaatcatgtgggtacaaggaattt 41608598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 54441015 - 54440876
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  54441015 gcagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgctcaactatgaaataaacaaagaat 54440916  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||||||| |||||| || |||||||    
T  54440915 aaaacatgtgggtacaaggaatctactttattcaacacac 54440876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 36168432 - 36168574
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| ||| ||||||| ||||||||| |||| |||||||||||||||||||    
T  36168432 gcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatgttcaatcatgaaataaacaaggaat 36168531  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaac 183  Q
    ||||  |||| ||| ||||||| ||||||||| | ||||||||    
T  36168532 aaatcttgtgggtataaggaatctactttgttcagcacacaac 36168574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 46736755 - 46736896
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||| |||| || ||||| ||||||| |||||||||||||||||| ||||||| |||||||| || |||| |||| ||||||||||||||||||||||||    
T  46736755 gcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatgttcaaccatgaaataaacaaggaat 46736854  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||||||||| ||| ||||||| ||||||||| | |||||||    
T  46736855 aaattatgtgggtacaaggaatctactttgttcagcacacaa 46736896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 34789482 - 34789610
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||    
T  34789482 gcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34789581  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||| ||| ||||||    
T  34789582 aaaacatgtgggtacaagaaatctacttt 34789610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 35643667 - 35643795
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  35643667 gcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 35643766  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  35643767 aaaacatgtgggtacaaggaatctacttt 35643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 45838993 - 45838865
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  45838993 gcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcagccatgaaataaacaaagaat 45838894  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| || |||| ||||||    
T  45838893 aaaacatgtgggtacaaagaatctacttt 45838865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 56077770 - 56077642
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||||| |||    
T  56077770 gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgcccaaccatgaaataaacaagaaat 56077671  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  56077670 aaaacatgtgggtacaaggaatctacttt 56077642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 21034337 - 21034464
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||| | |||||||| |||||||||| |||||    
T  21034337 cagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccacctacgttcaaccatcaaataaacaaagaata 21034436  T
Q  142 aattatgtgagtagaaggaatttacttt 169  Q
    || |||||| ||| ||| ||| ||||||    
T  21034437 aaatatgtgggtacaagaaatctacttt 21034464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 34807585 - 34807457
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||| | ||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||    
T  34807585 gcagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaat 34807486  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  34807485 aaaacatgtgggtacaaggaatctacttt 34807457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 24851565 - 24851692
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||||||| ||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgttcagccatgaaataaacaaagaat 24851664  T
Q  141 aaattatgtgagtagaaggaatttactt 168  Q
    |||  || || ||| ||||||| |||||    
T  24851665 aaaacatatgggtacaaggaatctactt 24851692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 33689928 - 33690023
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaag 136  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||||    
T  33689928 gcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctatactcaaccatgaaataaacaag 33690023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 45838613 - 45838788
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||||| ||| || ||||||||| ||||||  ||||| |||||    
T  45838613 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtcca 45838711  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| ||||  ||| || |||| ||||||||| | |||||||    
T  45838712 accacctatgctcaaccatgaaataaacaaggaataaatcatgtaggtacaaagaatctactttgttcagcacacaa 45838788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 28465523 - 28465399
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |||||||     
T  28465523 ttttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaa 28465424  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     |||||  || ||||||| ||||||    
T  28465423 catgtggatacaaggaatctacttt 28465399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 26974385 - 26974512
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||||||||| |||||||||| |||||    
T  26974385 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgctcaaccataaaataaacaaagaata 26974484  T
Q  142 aattatgtgagtagaaggaatttacttt 169  Q
    ||  ||||| ||| ||| ||| ||||||    
T  26974485 aaacatgtgggtacaagaaatctacttt 26974512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 16214941 - 16214839
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||| |  ||||||||||||| ||||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  16214941 gcagttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 16214842  T
Q  141 aaa 143  Q
    |||    
T  16214841 aaa 16214839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 18965580 - 18965454
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||||||    ||||||| |||||||| ||||||||||||||||| ||||||||||| |||| | ||||||||||||||||||| |||||||||    
T  18965580 agttttagtcatactcccctattttcaactccataaacgcacataaatgacagttttagtccaaccacatctgctcaaccatgaaataaataaggaataa 18965481  T
Q  143 attatgtgagtagaaggaatttacttt 169  Q
    |  ||||||||| ||||||| ||||||    
T  18965480 aacatgtgagtacaaggaatctacttt 18965454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 35644004 - 35643872
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    |||||||||||| ||||| ||||||||||||||||||  |||||| |      ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  35644004 gcagttttagtcttatctccctatttccaactccaga--cgcacaga------gttttagtccaaccacttatgctcaaccatgaaataaacaaggaata 35643913  T
Q  142 aattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| ||||| ||| ||||||| ||||||||| | |||||||    
T  35643912 aatcatgtgggtacaaggaatctactttgttcagcacacaa 35643872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 36168774 - 36168649
Alignment:
Q  45 gttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||| ||||| ||||||| |||||||| ||| |||||||||| || ||||||||||| |||||||||||||||||| |||||||||| |||||||    
T  36168774 gttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgctcaaccataaaataaacaaagaataaa 36168675  T
Q  144 ttatgtgagtagaaggaatttacttt 169  Q
     |||||| ||| ||| ||| ||||||    
T  36168674 atatgtgggtacaagaaatctacttt 36168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 6616793 - 6616875
Alignment:
Q  62 ctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| || |||||||    
T  6616793 ctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctctaccatgaaataaagaaagaataaa 6616875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 33778025 - 33777927
Alignment:
Q  85 cataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  33778025 cataaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgtttagcacacaa 33777927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 41114259 - 41114344
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatga 126  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||  |||||||||| ||||||||||||||||||||    
T  41114259 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgctcaaccatga 41114344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 229282 - 229389
Alignment:
Q  63 tatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaa 161  Q
    ||||| |||||||| ||||||||| || |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||| || |||    
T  229282 tattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgctcaaccatgaaataaataaggaataaaacatgtgagtacaaagaa 229381  T
Q  162 tttacttt 169  Q
    | ||||||    
T  229382 tctacttt 229389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 35193374 - 35193548
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||| ||||| |||||||||| | ||||||| ||||||| ||     
T  35193374 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatct-cctattttcaacttcagaaacgcagagaaatgacagttttagacct 35193471  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     || ||||||||||||||||||||||||||||||||||  ||||| ||| ||||||   ||||| || |||||||||    
T  35193472 accccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaacccactttattcaacacacaa 35193548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 56077522 - 56077598
Alignment:
Q  96 ttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgtt 172  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||| |||||||||    
T  56077522 ttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaatcatgggggtacaaggaatctactttgtt 56077598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 17504074 - 17504199
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || || ||||||| |||||||||||||| | | ||||||| ||||||| ||  || |||||||||||||||||||||||||||||||    
T  17504074 gcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaat 17504172  T
Q  141 aaattatgtgagtagaaggaatttact 167  Q
    |||  ||||| ||| ||||||| ||||    
T  17504173 aaaacatgtgggtacaaggaatctact 17504199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 19529139 - 19529037
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  ||||| | |||||||||||  | ||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||    
T  19529139 gcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgctcaaccatgaaataaataaggaat 19529040  T
Q  141 aaa 143  Q
    |||    
T  19529039 aaa 19529037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 28166104 - 28166206
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| ||||| || ||||||||| ||||||  |||||| | || ||||||||||||||||||||||||||||| ||||    
T  28166104 gcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgctcaaccatgaaataaacaaagaat 28166203  T
Q  141 aaa 143  Q
    |||    
T  28166204 aaa 28166206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 33777776 - 33777850
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  33777776 gttttagtccaaccacctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaatttacttt 33777850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 24335880 - 24335986
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    ||||||| |||||||| ||||||||||||||||| ||||||   |  |||||||||||||||||||||||||||||||||||||  ||||||||| |||     
T  24335880 cctattttcaactccaaaaacgcacataaatgacagttttaa--ctaccacctatgctcaaccatgaaataaacaaggaataaagcatgtgagtacaagc 24335977  T
Q  160 aatttactt 168  Q
    ||| |||||    
T  24335978 aatctactt 24335986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 229605 - 229477
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||| || || || | ||||| |||||||||||||||||| || ||||  ||||||| || |||||||||||||||||||||||||| |||||||    
T  229605 gcagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgctcaaccatgaaataaataaggaat 229506  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  |||||  || ||||||| ||||||    
T  229505 aaagcatgtggatacaaggaatctacttt 229477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 6617064 - 6616977
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| | |||||||    
T  6617064 gttttagtccaaccgcctatgttcaaccatgaaataaacaaggaataaatcatgtgggtacaagaaatctactttgttcagcacacaa 6616977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 12593128 - 12593262
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    ||||| || ||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| | ||||||| |||| |||||||||||||| |||||||     
T  12593128 ttttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatgttcaa-catgaaataaacaaagaataaaa 12593226  T
Q  145 tatgtgagtagaaggaatttactttgttgaacacac 180  Q
     || || ||| |||||||  ||||| || |||||||    
T  12593227 catctgggtacaaggaatccactttattcaacacac 12593262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 26974664 - 26974589
Alignment:
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| | |||||||    
T  26974664 ccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaagaaatctactttgttcagcacacaa 26974589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 19528935 - 19529033
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcc 104  Q
    ||||| || |||||||||||||||||||       |||||||||||| ||||| ||||||||||||||| |||||||||| ||||||| ||||||||||    
T  19528935 tcgaataaaatcgtccctaaactatatgtttttttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 17504378 - 17504267
Alignment:
Q  69 caactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttact 167  Q
    |||||| ||||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||  |||    
T  17504378 caactctagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaggaatccact 17504279  T
Q  168 ttgttgaacaca 179  Q
    || || ||||||    
T  17504278 ttattcaacaca 17504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 18965240 - 18965357
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  || || | ||||| |||||| ||||||||| ||||||||| ||||||||||| |    ||||||||||||||||||||| |||||||    
T  18965240 gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac----tatgctcaaccatgaaataaataaggaat 18965335  T
Q  141 aaattatgtgagtagaaggaat 162  Q
    |||  ||||| ||| |||||||    
T  18965336 aaagcatgtgggtacaaggaat 18965357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 22434593 - 22434521
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  22434593 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 22434521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 51020966 - 51021010
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagta 154  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  51020966 cctatgctcaaccatgaaataaacaaggaataaagcatgtgagta 51021010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 11153523 - 11153453
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  11153523 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 11153453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 12234498 - 12234568
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  12234498 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 12234568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 18751978 - 18751908
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||| || ||||| ||||| || |||||||    
T  18751978 cctatgctcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaattcactttattcaacacac 18751908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 46193781 - 46193711
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  46193781 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 46193711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 2118672 - 2118639
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||||||||||||||||||    
T  2118672 cctatgctcaaccatgaaataaacaaggaataaa 2118639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 12503851 - 12503742
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||||||||||||||| |||||||  ||||| ||| || ||||  |||||     
T  12503851 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccacttta 12503752  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  12503751 ttcaacacac 12503742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 25937800 - 25937909
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || | ||||||||||||||||||||||||||||||||  ||||| ||| || ||||  |||||     
T  25937800 ctccaaaaacgcagagaaatgacagttttagacctaccccatatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 25937899  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  25937900 ttcaacacac 25937909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 15523649 - 15523577
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||| |||||||||||||||||||||||||    
T  15523649 ctccaaaaacgcaaagaaatgacagttttagacctaccccctatgcttaaccatgaaataaacaaggaataaa 15523577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 23494614 - 23494682
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  23494614 tatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 23494682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 54995447 - 54995411
Alignment:
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54995447 ccacctatgctcaactatgaaataaacaaggaataaa 54995411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 24336188 - 24336081
Alignment:
Q  63 tatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaa 161  Q
    ||||| |||||||||||||| | | ||||| | | ||||||||   ||| ||||||||||||||||||||| ||||||||||  ||||| ||| ||| ||    
T  24336188 tattttcaactccagaaacgtatagaaatggcagctttagtcctatcacatatgctcaaccatgaaataaataaggaataaagcatgtgggtacaagtaa 24336089  T
Q  162 tttacttt 169  Q
    | ||||||    
T  24336088 tctacttt 24336081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 4219726 - 4219796
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||| || ||||  ||||| || |||||||    
T  4219726 cctatgctcaaccatgaaataaacaatgaataaagcatgtgggtacaaagaatccactttattcaacacac 4219796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 26974713 - 26974662
Alignment:
Q  19 gtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttcca 70  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||    
T  26974713 gtccctaaactatatgtttttttgcagttttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 40160262 - 40160332
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||||| ||||||||||||| ||||| |  ||||||||| |||||||  ||||| || |||||||    
T  40160262 cctatgctcaactatgaaataaacaacgaatacaacatgtgagtacaaggaatccactttatttaacacac 40160332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 4219925 - 4219892
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  4219925 cctatgctcaaccatgaaatcaacaaggaataaa 4219892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 11153325 - 11153358
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  11153325 cctatgctcaaccatgaaatcaacaaggaataaa 11153358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 15523414 - 15523447
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  15523414 cctatgctcaaccatgaaatcaacaaggaataaa 15523447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 20470877 - 20470844
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  20470877 cctatgctcaaccatgaaatcaacaaggaataaa 20470844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 22434358 - 22434391
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  22434358 cctatgctcaaccatgaaatcaacaaggaataaa 22434391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 23494809 - 23494776
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  23494809 cctatgctcaaccatgaaatcaacaaggaataaa 23494776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 40160458 - 40160425
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||| ||||||||||||||||||    
T  40160458 cctatgctcaaccattaaataaacaaggaataaa 40160425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 45082790 - 45082757
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  45082790 cctatgctcaaccatgaaatcaacaaggaataaa 45082757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 46193584 - 46193617
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  46193584 cctatgctcaaccatgaaatcaacaaggaataaa 46193617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 51021162 - 51021129
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  51021162 cctatgctcaaccatgaaatcaacaaggaataaa 51021129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 10795497 - 10795564
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacaca 179  Q
    |||| |||||||||||||||| ||||||||||| |||||| ||| |||||||  ||||| || ||||||    
T  10795497 ctatactcaaccatgaaataatcaaggaataaagtatgtg-gtataaggaatccactttattaaacaca 10795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 25938036 - 25938004
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||| |||||||||||||    
T  25938036 ctatgctcaaccatgaaattaacaaggaataaa 25938004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 7732588 - 7732729
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  7732588 gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 7732687  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||||  |||| ||| ||||||| ||||||||| |||||||||    
T  7732688 aaatcttgtgggtacaaggaatctactttgtttaacacacaa 7732729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 25637263 - 25637439
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       | |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  |||    
T  25637263 tcgaacaaaatcgtccctaaactatatgtttttttgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagcca 25637362  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| |  |||||| ||||||| ||||||||| | |||||||    
T  25637363 accacctatgctcaaccatgaaataaacaaggaataaatcacatgagtacaaggaatctactttgttcagcacacaa 25637439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 28687979 - 28687805
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       ||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  28687979 tcgaacaaaatcgtccctaaactatatgtttttt-gcacttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtcca 28687881  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| ||||| |||  | |||| ||||||||| |||||||||    
T  28687880 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggta-tatgaatctactttgttcaacacacaa 28687805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 11973848 - 11973707
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  ||||||||||||||||||| |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  11973848 gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 11973749  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| | ||| ||| ||||||| ||||||||| | |||||||    
T  11973748 aaatcacgtgggtacaaggaatatactttgttcagcacacaa 11973707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 27245304 - 27245445
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| | |||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  27245304 gcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 27245403  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||    
T  27245404 aaatcatgtgggtataaggaatctactttgttcagcacacaa 27245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 26026383 - 26026559
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       |||||||||||| ||||| ||||||| |||||||||||||||||| ||||||| |||||||| ||    
T  26026383 tcgaacaaaatcgtccataaactatatgtttttttgcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttca 26026482  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||| ||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||| | |||||||    
T  26026483 accacatatgctcaaccatgaaataaacaaggaataaatcatgtgggtataaggaatctactttgttcagcacacaa 26026559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 35161282 - 35161106
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||| | ||     
T  35161282 tcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccg 35161183  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     |||||||||||||||||||||||||||||||||||||| || || ||| ||||||| ||||||||| | |||||||    
T  35161182 accacctatgctcaaccatgaaataaacaaggaataaatcatatgggtacaaggaatctactttgttcagcacacaa 35161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 5745739 - 5745880
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5745739 gcagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 5745838  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| | |||| ||| ||||||| |||||| || | |||||||    
T  5745839 aaaatgtgtgggtacaaggaatctactttattcagcacacaa 5745880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 5746081 - 5745944
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  5746081 ttttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgcttaaccatgaaataaacaaggaataaat 5745982  T
Q  145 tatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
     ||||| ||| ||||||| ||||||||| | |||||||    
T  5745981 catgtgggtacaaggaatctactttgttcagcacacaa 5745944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 26048393 - 26048252
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26048393 gcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaat 26048294  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| || || ||| || |||| ||||||||| | |||||||    
T  26048293 aaatcatatgggtacaaagaatctactttgtttagcacacaa 26048252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 48247691 - 48247819
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  48247691 gcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgctcatccatgaaataaacaaggaat 48247790  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||| ||||| ||| || |||| ||||||    
T  48247791 aaatcatgtgggtacaaagaatctacttt 48247819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 787226 - 787087
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  787226 agttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgctcaaccatgaaataaacaaggaataa 787127  T
Q  143 attatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    || ||| | ||| || |||| ||||||||| |||||||||    
T  787126 atcatgcgggtacaaagaatctactttgttcaacacacaa 787087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 16081745 - 16081604
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  16081745 gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatgttcaaccatgaaataaacaaggaat 16081646  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    |||| ||||| ||| || |||| ||||||||| | |||||||    
T  16081645 aaatcatgtgggtacaaagaatctactttgttcagcacacaa 16081604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 25637644 - 25637516
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  25637644 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 25637545  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  25637544 aaaacatgtgggtacaaggaatctacttt 25637516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 48248072 - 48247909
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtcca 105  Q
    ||||| || ||||||| |||||||||||       ||||||||||||  |||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  48248072 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtcca 48247973  T
Q  106 gccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
     ||||||||||||||||||||||||||||| |||||||  ||||| ||| ||| ||| ||||||    
T  48247972 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaagaaatctacttt 48247909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 9181854 - 9181753
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  9181854 cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaata 9181755  T
Q  142 aa 143  Q
    ||    
T  9181754 aa 9181753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 15712467 - 15712586
Alignment:
Q  44 agttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataa 142  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  15712467 agttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaacgaataa 15712566  T
Q  143 attatgtgagtagaaggaat 162  Q
    |  ||||| ||| |||||||    
T  15712567 aacatgtgggtacaaggaat 15712586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 27245646 - 27245511
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |  ||||||||||| |||||||||||||||||||||||||||||  ||||||     
T  27245646 ttttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgctcaaccatgaaataaacaaataataaaa 27245547  T
Q  145 tatgtgagtagaaggaatttactttgttgaacacac 180  Q
     ||||| ||| ||||||| |||||| |||| |||||    
T  27245546 catgtgggtacaaggaatctactttattgagcacac 27245511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 16081399 - 16081527
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| |||| |||| ||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||    
T  16081399 gcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaat 16081498  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  16081499 aaaacatgtgggtacaaggaatctacttt 16081527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 2758144 - 2758013
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||| ||||||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||| |||| |||||| |||||||||||||||||| |||    
T  2758144 gcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccacttatgctaaaccatgaaataaacaagaaat 2758045  T
Q  141 aaattatgtgagtagaaggaatttactttgtt 172  Q
    ||| |||||| ||| ||| ||| |||||||||    
T  2758044 aaagtatgtgggtacaagaaatctactttgtt 2758013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 26026764 - 26026625
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||  ||||| |||||||||||||||| ||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  26026764 gcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 26026665  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||||||| || ||| || |||||||    
T  26026664 aaaacatgtgggtacaaggaatatattttattcaacacac 26026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 24929749 - 24929640
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| | |||||||||||||||||||||| ||||| |||    
T  24929749 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgctcaaccatgaaatagacaagaaat 24929650  T
Q  141 aaattatgtg 150  Q
    |||| |||||    
T  24929649 aaatcatgtg 24929640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 14311733 - 14311605
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||  |||||||||| ||||||||| | ||||||||||||||||| ||||    
T  14311733 gcagttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgtttaaccatgaaataaacaaagaat 14311634  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    |||  ||||| ||| ||||||| ||||||    
T  14311633 aaaacatgtgggtacaaggaatatacttt 14311605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 11971439 - 11971566
Alignment:
Q  43 cagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaata 141  Q
    ||||||||||| ||||| ||||||||||| || |||||| |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  11971439 cagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgctcaacaatgaaataaacaaagaata 11971538  T
Q  142 aattatgtgagtagaaggaatttacttt 169  Q
    ||  ||||| ||| || |||| ||||||    
T  11971539 aaacatgtgggtacaatgaatctacttt 11971566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 26048067 - 26048150
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26048067 cctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaa 26048150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 786883 - 786985
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| || |||| |||||||| || ||||||||| ||||||||||||||||||||||||    
T  786883 gcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatggtcaaccatgaaataaacaaggaat 786982  T
Q  141 aaa 143  Q
    |||    
T  786983 aaa 786985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 34595197 - 34595116
Alignment:
Q  63 tatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  34595197 tattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgctcaaccatgaaataaacaaggaataaa 34595116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 39388748 - 39388610
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaa-tgac-gttttagtcc 104  Q
    ||||| || |||||| ||||||||||||       |||||||||||| ||||| ||||||| |||||||| ||||||||| ||| |||| ||||||||||    
T  39388748 tcgaacaaaatcgtctctaaactatatgtttttttgcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtcc 39388649  T
Q  105 agccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    | |||| |||||||||||||||||||||||| |||||||    
T  39388648 aaccacatatgctcaaccatgaaataaacaaagaataaa 39388610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 9181632 - 9181716
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatg 125  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||    
T  9181632 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaatcatg 9181716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 5333946 - 5334112
Alignment:
Q  7 tcgaagaatatcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttttagtccag 106  Q
    ||||| || |||||||||||||||||||       |||||||||||||||||  ||||||||| |||||||||| | |||        |||||||||||     
T  5333946 tcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcatatccccctatttcctactccagaaatg-aca--------gttttagtccaa 5334035  T
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaac 183  Q
    | |||||||||||||||||||||||||||||||||||| ||||  ||| ||||||| ||||||||| | ||||||||    
T  5334036 ctacctatgctcaaccatgaaataaacaaggaataaatcatgtaggtacaaggaatctactttgttcagcacacaac 5334112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 33881030 - 33880903
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||  ||||||| |||||||||||||||||||||||||| |||||||||    | |||||||||||||||||||||||||||| ||    
T  33881030 gcagttttagtcttatcc-cctattttcaactccagaaacgcacataaatgacagttttagtcatatcccctatgctcaaccatgaaataaacaagggat 33880932  T
Q  141 aaattatgtgagtagaaggaatttacttt 169  Q
    | |  ||||| ||| ||||||| ||||||    
T  33880931 acaacatgtgggtacaaggaatctacttt 33880903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 14311390 - 14311497
Alignment:
Q  16 atcgtccctaaactatatgnnnnnnngcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctat 114  Q
    |||||||||||||||||||        |||||||| || ||||| |||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  14311390 atcgtccctaaactatatgtttttttacagttttaatcctatctccctatttccaactccataaacacacataaatgacagttttagtccaaccacctat 14311489  T
Q  115 gctcaacc 122  Q
    ||||||||    
T  14311490 gctcaacc 14311497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 34594701 - 34594810
Alignment:
Q  61 cctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaagg 159  Q
    ||||||| |||||| ||||||  ||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||||||||  | ||| ||| ||||    
T  34594701 cctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgctcaaccataaaataaacaaggaataaagcaagtgggtacaagg 34594800  T
Q  160 aatttacttt 169  Q
    ||| ||||||    
T  34594801 aatctacttt 34594810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 7732929 - 7732806
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgacgttt-tagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| ||||||| |||||||| ||| ||||| |||| ||  || ||||||| ||||||||||||||||||||||||||||| |||||||     
T  7732929 ttttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgctcaaccatgaaataaacaaagaataaaa 7732830  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||||| ||| ||||||| ||||||    
T  7732829 catgtg-gtacaaggaatctacttt 7732806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 35160906 - 35161029
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaat 144  Q
    |||||||| ||||| ||||||| ||||||||||  |||||| ||||||  ||||||||||| |||||||||| |||||||||||||||||| |||||||     
T  35160906 ttttagtcctatctccctattttcaactccagag-cgcacagaaatgatagttttagtccaaccacctatgcccaaccatgaaataaacaaagaataaaa 35161004  T
Q  145 tatgtgagtagaaggaatttacttt 169  Q
     ||||| ||| || |||| ||||||    
T  35161005 catgtgggtacaatgaatctacttt 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 5334262 - 5334188
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  ||| | ||| ||||||| ||||||    
T  5334262 gttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaagcatgcgggtacaaggaatctacttt 5334188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 28687693 - 28687745
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 94  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28687693 gcagttctagtcctatcttcctatttccaactccagaaacgcacataaatgac 28687745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 9394176 - 9394037
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||| ||||||||||||| || |||| || | ||||||| ||||||| |   || ||||||||||||||||||||| | |||||||    
T  9394176 gcagttttagtcctatct-cctatttccaacttcaaaaacacaaagaaatgacagttttagacttacc-cctatgctcaaccatgaaatagataaggaat 9394079  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||| |||||| ||| |||||||  ||||| || |||||||||    
T  9394078 aaaatatgtgggtacaaggaatccactttattcaacacacaa 9394037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 35579016 - 35579137
Alignment:
Q  60 tcctatttccaactccagaaacgcacataaatgacgtttt-agtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaag 158  Q
    |||||||| |||||||||||||||| | ||||||| |||| || ||   | ||||||||||||||||||||||||||| ||||||  ||||| ||| |||    
T  35579016 tcctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgctcaaccatgaaataaacaagaaataaagcatgtgggtacaag 35579115  T
Q  159 gaatttactttgttgaacacac 180  Q
    ||||  ||||| || |||||||    
T  35579116 gaatccactttattcaacacac 35579137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 33880753 - 33880847
Alignment:
Q  75 cagaaacgcacataaat-gacgttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||||||||||||||| |  ||||||||||  || |||||| |||||||||||||||||||||||||||  ||||| ||| ||||||| ||||||    
T  33880753 cagaaacgcacataaattgttgttttagtcctaccgcctatggtcaaccatgaaataaacaaggaataaaacatgtg-gtacaaggaatctacttt 33880847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 29100227 - 29100157
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||| ||||  ||||| || |||||||    
T  29100227 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtagaaagaatccactttattcaacacac 29100157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 35579331 - 35579219
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    ||||||||||||||| || ||||||| |||||| | |||||||   |||| || ||||||| ||  || ||||||||||||||| |||||||||||||||    
T  35579331 gcagttttagtcatacct-cctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgctcaaccataaaataaacaaggaat 35579233  T
Q  141 aaattatgtgagta 154  Q
    |||  |||||||||    
T  35579232 aaagcatgtgagta 35579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 4478077 - 4478007
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  || || ||| || ||||  ||||| ||||||||||    
T  4478077 cctatgctcaaccatgaaataaacaaggaataaagcatatgggtacaaagaatccactttattgaacacac 4478007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 19590694 - 19590764
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  19590694 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 19590764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 4641594 - 4641679
Alignment:
Q  95 gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||| || ||| |||||||||||||||||||||||||||||| |||  ||||| ||| || ||||  ||||| || |||||||    
T  4641594 gttttagacctgccccctatgctcaaccatgaaataaacaaggaaaaaaacatgtgggtacaaagaatcgactttattcaacacac 4641679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 5184548 - 5184589
Alignment:
Q  109 acctatgctcaaccatgaaataaacaaggaataaattatgtg 150  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  5184548 acctatgttcaaccatgaaataaacaaggaataaatcatgtg 5184589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 34534170 - 34534097
Alignment:
Q  107 ccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  34534170 ccacctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 34534097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 2659255 - 2659183
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||| |||||||||||||||||||||||||||    
T  2659255 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaa 2659183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 32005029 - 32004957
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||| |||||||||||||||||||||||||||    
T  32005029 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaa 32004957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 143
Target Start/End: Original strand, 2659016 - 2659051
Alignment:
Q  108 cacctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||| |||||||||||||    
T  2659016 cacctatgctcaaccatgaaatcaacaaggaataaa 2659051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 37786897 - 37786980
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagta 154  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||  ||||||||||  |||||||||    
T  37786897 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataattaaggaataaaacatgtgagta 37786980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 35289082 - 35289124
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgag 152  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  35289082 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgag 35289124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 35289277 - 35289207
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  35289277 cctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 35289207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 4477880 - 4477913
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  4477880 cctatgctcaaccatgaaatcaacaaggaataaa 4477913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 9393914 - 9393947
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||||||||| |||||||    
T  9393914 cctatgctcaaccatgaaataaacaaagaataaa 9393947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 19590891 - 19590858
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  19590891 cctatgctcaaccatgaaatcaacaaggaataaa 19590858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 19830550 - 19830659
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||| |||||||||||||||| ||||||  ||||| ||| || ||||  |||||     
T  19830550 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcagccatgaaataaacaagaaataaagcatgtgggtacaaagaatccacttta 19830649  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  19830650 ttcaacacac 19830659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 19830786 - 19830753
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  19830786 cctatgctcaaccatgaaatcaacaaggaataaa 19830753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 32004793 - 32004826
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  32004793 cctatgctcaaccatgaaatcaacaaggaataaa 32004826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 5184498 - 5184546
Alignment:
Q  46 ttttagtcatatcttcctatttccaactccagaaacgcacataaatgac 94  Q
    |||||||| ||||| |||||||||||||||| ||| ||||| |||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatgac 5184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 29100030 - 29100062
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||||||||||||||||| |||||||||||||    
T  29100030 ctatgctcaaccatgaaatcaacaaggaataaa 29100062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 6492 - 6631
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| |||| |||| ||||||||||||| |||||||||| ||||    
T  6492 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgctcaaccataaaataaacaaagaat 6591  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||||||| |||||| || |||||||    
T  6592 aaaacatgtgggtacaaggaatctactttattcaacacac 6631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 6824 - 6699
Alignment:
Q  55 tatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagt 153  Q
    ||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||| ||    
T  6824 tatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaattaataaatcatgtgggt 6725  T
Q  154 agaaggaatttactttgttgaacaca 179  Q
    | ||| ||| ||||||||| ||||||    
T  6724 acaagcaatctactttgttcaacaca 6699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 6510 - 6649
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| |||| |||| ||||||||||||| |||||||||| ||||    
T  6510 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgctcaaccataaaataaacaaagaat 6609  T
Q  141 aaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||  ||||| ||| ||||||| |||||| || |||||||    
T  6610 aaaacatgtgggtacaaggaatctactttattcaacacac 6649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 6842 - 6717
Alignment:
Q  55 tatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagt 153  Q
    ||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||| ||    
T  6842 tatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaattaataaatcatgtgggt 6743  T
Q  154 agaaggaatttactttgttgaacaca 179  Q
    | ||| ||| ||||||||| ||||||    
T  6742 acaagcaatctactttgttcaacaca 6717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 78417 - 78506
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgacg-ttttagtccagccacctatgctcaaccatgaaata 130  Q
    |||||||||||| |||||  ||||||||||||||||||| ||| | |||||||  |||||||||| ||||||||||||||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgctcaaccatgaaata 78506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 84385 - 84441
Alignment:
Q  126 aaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacacaa 182  Q
    ||||||||||||||||||| ||||| ||| | ||||| ||||||||| | |||||||    
T  84385 aaataaacaaggaataaatcatgtgggtacacggaatctactttgttcagcacacaa 84441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 10790 - 10860
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| |||||||  ||||| || |||||||    
T  10790 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaggaatccactttattcaacacac 10860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 4962 - 5032
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || |||| |||||| || |||||||    
T  4962 cctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatctactttattcaacacac 5032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 205813 - 205712
Alignment:
Q  42 gcagttttagtcatatcttcctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 140  Q
    |||||||||||| || | |||||||| |||||||| ||||||| | ||||| | ||||||| ||  || |||||||||||||||||||||||||||| ||    
T  205813 gcagttttagtccta-cgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgctcaaccatgaaataaacaaggcat 205715  T
Q  141 aaa 143  Q
    |||    
T  205714 aaa 205712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 15471 - 15412
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttacttt 169  Q
    ||||| ||||||||||||||||||||||||||||  ||||| ||| ||||||| ||||||    
T  15471 cctattctcaaccatgaaataaacaaggaataaagcatgtgggtacaaggaatctacttt 15412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 16626 - 16735
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || |||||||||||||||||||||||||| |||||||  ||||| ||| || ||||  |||||     
T  16626 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccacttta 16725  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  16726 ttcaacacac 16735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 134088 - 133979
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||||||||||||||| ||||||||||  ||||| ||| || ||||  |||||     
T  134088 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 133989  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  133988 ttcaacacac 133979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 4583 - 4513
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||| |||||||||||||||||||||||  ||||| ||| || ||||  ||||| || |||||||    
T  4583 cctatgctcatccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacac 4513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 4382 - 4415
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  4382 cctatgctcaaccatgaaatcaacaaggaataaa 4415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 10249 - 10216
Alignment:
Q  110 cctatgctcaaccatgaaataaacaaggaataaa 143  Q
    |||||||||||||||||||| |||||||||||||    
T  10249 cctatgctcaaccatgaaatcaacaaggaataaa 10216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 42574 - 42465
Alignment:
Q  72 ctccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttg 170  Q
    ||||| ||||||| | ||||||| ||||||| ||  || ||||||||||| ||||||||||| ||||||||||  ||||| ||| || ||||  |||||     
T  42574 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaatcatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 42475  T
Q  171 ttgaacacac 180  Q
    || |||||||    
T  42474 ttcaacacac 42465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 923 - 991
Alignment:
Q  112 tatgctcaaccatgaaataaacaaggaataaattatgtgagtagaaggaatttactttgttgaacacac 180  Q
    |||||||||||| |||||||||||||||||||  ||||| ||| ||  |||| ||||| || |||||||    
T  923 tatgctcaaccacgaaataaacaaggaataaagcatgtgtgtacaaataattcactttattcaacacac 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 19003 - 19035
Alignment:
Q  111 ctatgctcaaccatgaaataaacaaggaataaa 143  Q
    ||||| |||||||||||||||||||||||||||    
T  19003 ctatgttcaaccatgaaataaacaaggaataaa 19035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University