View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21414_high_4 (Length: 328)
Name: NF21414_high_4
Description: NF21414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21414_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 47689078 - 47688787
Alignment:
| Q |
1 |
aaaggcaatacataaaacactaaagaaaacagttaaggtaacctatatatctaatcctatactgttaagggattgccatgcttctgagttcagatcatta |
100 |
Q |
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| T |
47689078 |
aaaggcaatacataaaacactaaagaaaacagttaaggtaacctatatatctaatcctatactgttaagggattgccatgcttctgagttcagatcatta |
47688979 |
T |
|
| Q |
101 |
gttcaacacctcacaggtaaaaactccaacaatttcactcatcaaagcattcctctgcatatgcacaatgatcatttggaccacccaccactcgcaattg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
47688978 |
gttcaacacctcacaggtaaaaactccaacaatttcactcatcaaagcattcctctgcatatgcacaatgatcatttggaccacccaccactcacaattg |
47688879 |
T |
|
| Q |
201 |
cagctacatcggctgaagatgtgagcaccacatattacaacagatcaatggatatggattctttcgagttcgatgtagtagattacttttggaaagaa |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||||||||||| |
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| T |
47688878 |
cagctacatcggctgaagatgtgagcaccacatattacaacagatcaat------ggattctgtcaagttcgatgtaatagattacttttggaaagaa |
47688787 |
T |
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