View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21415_high_6 (Length: 301)
Name: NF21415_high_6
Description: NF21415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21415_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 27476302 - 27476030
Alignment:
| Q |
19 |
atgagatagtgttgatgttgtccctttctaactaacctatgttaagattgaatgctagtcatataagtgagggcatgaattcatatattgaatattgttg |
118 |
Q |
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| T |
27476302 |
atgagatagtgttgatgttgtccctttctaactaacctatggtaagattgaatgctagtcatataagtgagggcatgaattcatatattgaatattgttg |
27476203 |
T |
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| Q |
119 |
aagcactcgggtttaatccgttcctcaaaaaatttccttagaaataaatttcctttcataatttcaactaagaaaataatattgaggatgtttgtgtttt |
218 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
27476202 |
aagcactcgggtttaatccgttcctcaaaaattttccttagaaataaatttcctttcataatttcaactaagaaaataatattgaggatgtttttgtttt |
27476103 |
T |
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| Q |
219 |
gtagctttctacaaaacacggacaacgcttgagtagctacttgtacctcctcgatgcatcgtagagatattct |
291 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27476102 |
gtagctttttacaaaacacggacaacgcttgagtagctacttgtacctcctcgatgcatcgtagagatattct |
27476030 |
T |
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