View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21416_high_14 (Length: 219)

Name: NF21416_high_14
Description: NF21416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21416_high_14
NF21416_high_14
[»] chr2 (45 HSPs)
chr2 (1-198)||(4413151-4413348)
chr2 (7-174)||(13413200-13413367)
chr2 (7-162)||(17344499-17344654)
chr2 (7-173)||(41867999-41868164)
chr2 (11-158)||(9685510-9685657)
chr2 (7-172)||(18745045-18745210)
chr2 (12-162)||(19161879-19162029)
chr2 (1-150)||(28224873-28225022)
chr2 (55-172)||(15515286-15515403)
chr2 (1-140)||(16351929-16352069)
chr2 (7-172)||(2886706-2886872)
chr2 (85-162)||(3208413-3208490)
chr2 (7-116)||(27502269-27502378)
chr2 (85-174)||(42122666-42122755)
chr2 (1-91)||(44686348-44686438)
chr2 (6-110)||(3825639-3825743)
chr2 (42-150)||(27494184-27494292)
chr2 (94-172)||(20143123-20143201)
chr2 (18-151)||(23485038-23485172)
chr2 (70-163)||(2626001-2626094)
chr2 (6-66)||(20142815-20142875)
chr2 (14-132)||(1296175-1296293)
chr2 (13-111)||(44684955-44685053)
chr2 (85-162)||(30602350-30602427)
chr2 (1-65)||(34814903-34814967)
chr2 (86-162)||(41702133-41702209)
chr2 (6-148)||(5532296-5532437)
chr2 (1-111)||(7760930-7761040)
chr2 (106-157)||(40252159-40252210)
chr2 (79-173)||(2248492-2248586)
chr2 (7-148)||(11921301-11921436)
chr2 (1-111)||(13147185-13147295)
chr2 (29-103)||(24765181-24765255)
chr2 (85-162)||(32612331-32612409)
chr2 (105-162)||(10587144-10587201)
chr2 (33-98)||(20142871-20142935)
chr2 (18-110)||(3262244-3262336)
chr2 (41-81)||(33612670-33612710)
chr2 (1-76)||(2888463-2888538)
chr2 (115-162)||(4849686-4849733)
chr2 (7-58)||(32029177-32029228)
chr2 (29-103)||(24762900-24762974)
chr2 (1-67)||(8036567-8036635)
chr2 (109-162)||(38723985-38724038)
chr2 (120-172)||(13845384-13845436)
[»] chr7 (48 HSPs)
chr7 (7-172)||(21326929-21327094)
chr7 (1-172)||(25187016-25187187)
chr7 (1-173)||(19277141-19277315)
chr7 (13-172)||(45613939-45614098)
chr7 (1-173)||(4501109-4501281)
chr7 (1-172)||(982800-982971)
chr7 (8-162)||(24527445-24527604)
chr7 (1-172)||(22197838-22198008)
chr7 (1-172)||(22239813-22239983)
chr7 (1-157)||(40726565-40726721)
chr7 (1-172)||(27521322-27521493)
chr7 (44-172)||(27027758-27027886)
chr7 (38-162)||(45003019-45003143)
chr7 (48-175)||(45974731-45974858)
chr7 (1-157)||(5825139-5825295)
chr7 (7-110)||(48539094-48539197)
chr7 (8-162)||(28517379-28517533)
chr7 (6-124)||(41117860-41117978)
chr7 (1-162)||(5972301-5972462)
chr7 (1-111)||(23037457-23037567)
chr7 (7-163)||(10904978-10905134)
chr7 (1-109)||(43856788-43856896)
chr7 (1-98)||(30216143-30216240)
chr7 (1-173)||(34772633-34772804)
chr7 (27-172)||(43333941-43334087)
chr7 (1-147)||(32584476-32584623)
chr7 (6-81)||(42295274-42295349)
chr7 (31-109)||(5714954-5715032)
chr7 (6-150)||(9281221-9281370)
chr7 (6-150)||(9292192-9292341)
chr7 (7-162)||(44525860-44526001)
chr7 (89-162)||(38766185-38766258)
chr7 (8-148)||(36558960-36559099)
chr7 (113-162)||(2520918-2520967)
chr7 (116-172)||(32682003-32682059)
chr7 (100-150)||(38832175-38832225)
chr7 (133-175)||(48539284-48539326)
chr7 (50-162)||(2904242-2904353)
chr7 (6-94)||(23792941-23793029)
chr7 (56-143)||(29054729-29054816)
chr7 (88-139)||(34856749-34856800)
chr7 (38-73)||(38766259-38766294)
chr7 (36-115)||(38839234-38839313)
chr7 (39-81)||(6635086-6635128)
chr7 (31-103)||(7637625-7637698)
chr7 (106-150)||(36931892-36931936)
chr7 (67-115)||(37317863-37317911)
chr7 (130-162)||(41767698-41767730)
[»] chr3 (46 HSPs)
chr3 (7-172)||(32546646-32546811)
chr3 (1-172)||(53785560-53785731)
chr3 (7-162)||(44694-44852)
chr3 (6-162)||(39583319-39583475)
chr3 (7-162)||(44198628-44198783)
chr3 (1-160)||(37133084-37133243)
chr3 (1-172)||(52741597-52741768)
chr3 (8-162)||(26772619-26772773)
chr3 (5-162)||(13582371-13582528)
chr3 (10-162)||(38670974-38671126)
chr3 (6-162)||(49017828-49017980)
chr3 (11-172)||(4763888-4764048)
chr3 (1-146)||(26856847-26856992)
chr3 (61-172)||(26276461-26276577)
chr3 (41-163)||(4669788-4669910)
chr3 (1-117)||(5338552-5338665)
chr3 (1-110)||(38145969-38146078)
chr3 (1-162)||(21552525-21552690)
chr3 (8-111)||(52411983-52412086)
chr3 (12-162)||(4472923-4473073)
chr3 (1-103)||(3443397-3443499)
chr3 (9-111)||(25094665-25094767)
chr3 (3-109)||(25324943-25325049)
chr3 (35-163)||(8592001-8592128)
chr3 (14-162)||(46940871-46941019)
chr3 (26-148)||(3643028-3643148)
chr3 (8-162)||(38978891-38979045)
chr3 (58-130)||(3376880-3376952)
chr3 (1-76)||(51234563-51234638)
chr3 (65-162)||(2601690-2601787)
chr3 (9-111)||(42205979-42206081)
chr3 (1-138)||(37992218-37992354)
chr3 (1-81)||(54508469-54508549)
chr3 (103-178)||(39661372-39661447)
chr3 (42-120)||(26393812-26393890)
chr3 (27-144)||(4537561-4537677)
chr3 (66-115)||(45048653-45048702)
chr3 (35-150)||(35484799-35484914)
chr3 (15-81)||(7257655-7257721)
chr3 (1-110)||(7502097-7502204)
chr3 (16-110)||(32690966-32691060)
chr3 (126-155)||(2570794-2570823)
chr3 (34-62)||(4190826-4190854)
chr3 (34-62)||(4190998-4191026)
chr3 (1-69)||(7900812-7900880)
chr3 (9-101)||(25190027-25190119)
[»] chr1 (35 HSPs)
chr1 (1-162)||(22346756-22346917)
chr1 (7-162)||(24177602-24177757)
chr1 (7-173)||(21472853-21473019)
chr1 (8-172)||(28041219-28041383)
chr1 (25-173)||(868512-868658)
chr1 (9-173)||(31737416-31737579)
chr1 (1-160)||(20259882-20260041)
chr1 (1-162)||(2898563-2898724)
chr1 (1-148)||(34644441-34644588)
chr1 (1-162)||(7213104-7213272)
chr1 (62-162)||(28493477-28493577)
chr1 (51-162)||(4611050-4611161)
chr1 (76-172)||(19035330-19035426)
chr1 (6-157)||(4862079-4862231)
chr1 (46-162)||(30688418-30688534)
chr1 (71-173)||(1114023-1114125)
chr1 (1-130)||(2764372-2764501)
chr1 (61-162)||(5453956-5454057)
chr1 (8-157)||(47459549-47459697)
chr1 (54-162)||(29170322-29170430)
chr1 (31-172)||(45835301-45835441)
chr1 (7-117)||(45659739-45659847)
chr1 (1-63)||(29169878-29169940)
chr1 (8-162)||(48841174-48841328)
chr1 (1-106)||(38731526-38731631)
chr1 (89-172)||(44270008-44270091)
chr1 (71-172)||(17077971-17078072)
chr1 (61-148)||(50161569-50161656)
chr1 (44-131)||(21934269-21934357)
chr1 (7-62)||(35387747-35387802)
chr1 (116-162)||(33770721-33770767)
chr1 (19-148)||(6670208-6670337)
chr1 (88-149)||(31742485-31742546)
chr1 (30-81)||(11128368-11128419)
chr1 (1-51)||(42919832-42919882)
[»] chr4 (55 HSPs)
chr4 (15-172)||(30940831-30940988)
chr4 (7-172)||(53170364-53170529)
chr4 (1-172)||(16955311-16955482)
chr4 (1-172)||(600777-600948)
chr4 (8-162)||(3329857-3330011)
chr4 (7-162)||(34107787-34107942)
chr4 (8-162)||(50001018-50001172)
chr4 (1-150)||(4419137-4419285)
chr4 (8-150)||(23255586-23255728)
chr4 (8-157)||(39001263-39001412)
chr4 (7-162)||(26521350-26521504)
chr4 (7-148)||(50464387-50464528)
chr4 (6-150)||(55933550-55933694)
chr4 (8-162)||(53619447-53619601)
chr4 (85-173)||(40392723-40392811)
chr4 (1-162)||(25504156-25504317)
chr4 (54-162)||(23604951-23605059)
chr4 (1-164)||(132244-132407)
chr4 (55-162)||(31846964-31847071)
chr4 (1-150)||(42455692-42455841)
chr4 (1-101)||(56462191-56462291)
chr4 (13-150)||(48657012-48657147)
chr4 (1-150)||(7536656-7536805)
chr4 (61-178)||(47585153-47585270)
chr4 (46-149)||(50442609-50442712)
chr4 (1-91)||(38535654-38535744)
chr4 (1-143)||(50463031-50463170)
chr4 (26-157)||(8738071-8738202)
chr4 (12-143)||(23233211-23233340)
chr4 (6-81)||(6865910-6865984)
chr4 (15-146)||(45661568-45661699)
chr4 (6-149)||(9601084-9601222)
chr4 (75-157)||(12053333-12053415)
chr4 (28-114)||(18981651-18981735)
chr4 (8-157)||(32312803-32312957)
chr4 (1-78)||(46391399-46391474)
chr4 (34-143)||(23242780-23242889)
chr4 (6-103)||(34213540-34213636)
chr4 (85-149)||(54927354-54927418)
chr4 (6-81)||(28739847-28739922)
chr4 (1-115)||(54190936-54191050)
chr4 (1-45)||(747854-747898)
chr4 (61-109)||(3698685-3698733)
chr4 (42-110)||(22449812-22449879)
chr4 (10-110)||(46440983-46441083)
chr4 (9-110)||(49344232-49344337)
chr4 (41-148)||(16009242-16009347)
chr4 (111-162)||(27470994-27471045)
chr4 (1-40)||(50483281-50483320)
chr4 (1-45)||(712678-712722)
chr4 (62-161)||(1041286-1041386)
chr4 (3-87)||(30924995-30925079)
chr4 (10-111)||(49354160-49354265)
chr4 (50-130)||(50483315-50483395)
chr4 (1-97)||(53098347-53098443)
[»] chr8 (35 HSPs)
chr8 (18-172)||(22589438-22589592)
chr8 (7-157)||(38815160-38815310)
chr8 (7-175)||(18804461-18804628)
chr8 (7-143)||(37514101-37514237)
chr8 (1-171)||(24124880-24125050)
chr8 (1-127)||(3187866-3187991)
chr8 (9-131)||(39434559-39434681)
chr8 (38-173)||(24450972-24451105)
chr8 (76-172)||(18596759-18596855)
chr8 (1-109)||(3821138-3821246)
chr8 (6-162)||(40223493-40223645)
chr8 (1-119)||(6592480-6592597)
chr8 (1-130)||(6618178-6618306)
chr8 (38-162)||(42659088-42659212)
chr8 (47-131)||(8882236-8882320)
chr8 (1-111)||(5329687-5329797)
chr8 (64-173)||(500092-500201)
chr8 (7-131)||(4699763-4699886)
chr8 (1-109)||(9259377-9259485)
chr8 (1-65)||(35740071-35740135)
chr8 (9-148)||(43823864-43824003)
chr8 (1-98)||(121806-121903)
chr8 (1-150)||(25021899-25022048)
chr8 (121-172)||(1187397-1187448)
chr8 (67-162)||(24320198-24320293)
chr8 (1-97)||(8115738-8115834)
chr8 (6-110)||(28196105-28196209)
chr8 (39-110)||(4066758-4066829)
chr8 (1-97)||(4073460-4073556)
chr8 (9-94)||(3863243-3863331)
chr8 (7-52)||(500199-500244)
chr8 (6-131)||(3825528-3825652)
chr8 (1-76)||(39671257-39671332)
chr8 (34-111)||(8714721-8714797)
chr8 (53-97)||(36004048-36004092)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-172)||(102957-103122)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-172)||(33101-33272)
[»] chr6 (26 HSPs)
chr6 (7-160)||(32115581-32115734)
chr6 (8-150)||(17249397-17249539)
chr6 (34-157)||(3137365-3137488)
chr6 (1-150)||(29338164-29338313)
chr6 (6-162)||(33220801-33220957)
chr6 (1-172)||(959432-959602)
chr6 (1-162)||(28625792-28625952)
chr6 (63-162)||(7749342-7749441)
chr6 (1-108)||(4206681-4206788)
chr6 (1-150)||(357801-357950)
chr6 (46-162)||(34168782-34168897)
chr6 (7-119)||(34304400-34304512)
chr6 (6-157)||(28009077-28009228)
chr6 (29-163)||(28543257-28543391)
chr6 (1-108)||(4166007-4166114)
chr6 (9-116)||(34554370-34554476)
chr6 (7-58)||(45768-45819)
chr6 (111-172)||(45816-45877)
chr6 (100-172)||(34562361-34562433)
chr6 (89-159)||(749501-749571)
chr6 (6-110)||(13398272-13398376)
chr6 (8-55)||(34415404-34415451)
chr6 (106-162)||(2134994-2135050)
chr6 (105-162)||(947962-948019)
chr6 (9-102)||(3714838-3714931)
chr6 (67-144)||(10662948-10663025)
[»] chr5 (33 HSPs)
chr5 (1-162)||(32269882-32270042)
chr5 (15-162)||(2566194-2566341)
chr5 (26-172)||(15292135-15292281)
chr5 (1-162)||(42921559-42921719)
chr5 (8-150)||(430475-430617)
chr5 (1-162)||(13166995-13167156)
chr5 (1-130)||(37873723-37873852)
chr5 (8-162)||(27336556-27336708)
chr5 (7-162)||(35310309-35310464)
chr5 (27-157)||(23023461-23023591)
chr5 (7-162)||(14423552-14423698)
chr5 (12-162)||(26212679-26212829)
chr5 (7-116)||(22188746-22188855)
chr5 (1-162)||(33692140-33692298)
chr5 (6-131)||(25663122-25663247)
chr5 (21-100)||(15809972-15810052)
chr5 (6-150)||(23423961-23424105)
chr5 (1-131)||(27294330-27294460)
chr5 (10-162)||(38875504-38875651)
chr5 (30-144)||(15506729-15506843)
chr5 (7-150)||(34335210-34335353)
chr5 (71-163)||(12033291-12033383)
chr5 (26-109)||(16017087-16017170)
chr5 (46-157)||(43349926-43350037)
chr5 (1-146)||(8100431-8100574)
chr5 (27-78)||(24113520-24113571)
chr5 (94-156)||(2917539-2917601)
chr5 (86-144)||(11005757-11005815)
chr5 (85-148)||(23092694-23092757)
chr5 (113-163)||(27913490-27913540)
chr5 (67-163)||(12739059-12739154)
chr5 (67-163)||(12801882-12801977)
chr5 (26-98)||(22819748-22819820)
[»] scaffold0309 (1 HSPs)
scaffold0309 (71-173)||(5174-5276)
[»] scaffold1768 (1 HSPs)
scaffold1768 (6-162)||(274-430)
[»] scaffold0490 (1 HSPs)
scaffold0490 (7-78)||(6279-6350)
[»] scaffold0470 (1 HSPs)
scaffold0470 (1-130)||(7496-7624)
[»] scaffold0406 (1 HSPs)
scaffold0406 (74-161)||(6750-6837)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-146)||(49292-49419)
[»] scaffold0244 (1 HSPs)
scaffold0244 (69-162)||(16807-16900)
[»] scaffold0119 (1 HSPs)
scaffold0119 (9-132)||(15997-16120)
[»] scaffold0110 (1 HSPs)
scaffold0110 (37-163)||(47641-47767)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-51)||(18449-18499)
[»] scaffold0361 (1 HSPs)
scaffold0361 (27-99)||(17390-17460)


Alignment Details
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 4413151 - 4413348
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4413151 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaaagtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 4413250  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataatttataaaggaaatcacatgccatg 198  Q
    ||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4413251 atccaaaaaggtctagcggcgcagcttgttgcccacttgccttctattcaagtgtaaataattgtttatataatttataaaggaaatcacatgccatg 4413348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 13413367 - 13413200
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||    
T  13413367 tgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttatgagaattggttttgccatccaa 13413268  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataat 174  Q
    ||||| ||| |||  |||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  13413267 aaaggcctaacggctcagcttgttgtccgcttgtcttctattcaagtgtaaataatggtttatataat 13413200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 17344654 - 17344499
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||| ||    
T  17344654 tgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttttcgatccaa 17344555  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||    
T  17344554 aaaggtctatcggcgcagcttgttgccggcttgccttctattcaagtgtaaataat 17344499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 41867999 - 41868164
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||||||| |||||||| | ||    
T  41867999 tgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcccaggtccatgaatgttgtgtttacgaggattggttttgcca-ccaa 41868097  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    |||| |||||||| ||| ||||||| |||||||| ||||||||||||||||||||| || |||||||    
T  41868098 aaagatctagcggcgcaacttgttgcccgcttgctttctattcaagtgtaaataatggtttatataa 41868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 9685510 - 9685657
Alignment:
Q  11 gaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaag 110  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||| ||||||    
T  9685510 gaccttctatatagagttcaaaaggtcatggatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacaaagattgtttttgccatccaaaaag 9685609  T
Q  111 gtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaa 158  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  9685610 gtctagcggcgcagcttgttgcccgcttgccttatattcaaatgtaaa 9685657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 18745045 - 18745210
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||| || ||||||| |||||||||| ||    
T  18745045 tgttggccttctacatagagttcaaaagatcatgcatagcaatgtcatatttcctaggtctatgaatgttgtgtttataaggattggttttgccatccaa 18745144  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||||||| ||||||| |||  |||||| |||||||||||||||||||||| || ||||||    
T  18745145 aaaggtctagcggcgcagcttattgctcgcttgtcttctattcaagtgtaaataatggtttatata 18745210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 19161879 - 19162029
Alignment:
Q  12 accttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaagg 111  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||   |||||||||||||| |||| ||||||     
T  19161879 accttttacatagagttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcaatgaatagtgtgttttcgaggattgattttgtcatccaaaaaga 19161978  T
Q  112 tctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
      ||| || |||||||| ||||||||||| |||||||||| ||||||||||    
T  19161979 cgtagtggcgcagcttgctgtccgcttgctttctattcaaatgtaaataat 19162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28225022 - 28224873
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| || |||| | | ||||||  |||| | |||||||||||||| |||||||||||||| |||| ||||  |||||||    
T  28225022 agaggttgttgaccttctacatagagtccaaaggattatgcatgacaatattatgtctcctaggtcaatgaatgttgtgtttatgaagatttgttttgcc 28224923  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| ||||||||||||||| ||||||| ||| ||||||| || |||||||    
T  28224922 atccaaaaaggtctagcggcgcagcttattgcccgcttgtctcctattca 28224873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 15515286 - 15515403
Alignment:
Q  55 gtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtg 154  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||||||| ||||| ||||||||| |||| |||||| | | |||||||||| |||||||    
T  15515286 gtctcctaggtccaccaatgttgtgttcacgaggattggttttgccatccaaaaaagtctagcggcgcagtttgttgcctgtttgccttctactcaagtg 15515385  T
Q  155 taaataattgtgtatata 172  Q
    |||||||| || ||||||    
T  15515386 taaataatggtttatata 15515403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16351929 - 16352069
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| | |||||||||||||| ||||| ||||||| || |||| | || ||||| |||||||    
T  16351929 agaggttgttgaccttctacatagagttcaaatggtcatgcacaacaatgtcatgtctcttaggtacatgaatattatgtttacgatgattgtttttgcc 16352028  T
Q  101 atct-aaaaaggtctagcggtgcagcttgttgtccgcttgc 140  Q
    |||| ||||| | |||| | ||||||||||||||| |||||    
T  16352029 atctaaaaaaagcctagtgatgcagcttgttgtccacttgc 16352069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 2886706 - 2886872
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgatttt-gccatcta 105  Q
    |||||| ||| ||||||| |||||||||  ||||||||||||| |||| |||| | ||||||| ||||||||||| ||||||||||||||| | |||| |    
T  2886706 tgttgatcttttacatagagttcaaaagagcatgcatagcaatatcatatctcgt-ggtccataaatgttgtgtttatgaggattgatttttgtcatcca 2886804  T
Q  106 aaaagg-tctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||| |||  | ||||||||||||| | |||||  ||||||||||||||||||||| || ||||||    
T  2886805 aaaagggtctgacagtgcagcttgttgcctgcttgtattctattcaagtgtaaataatggtttatata 2886872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 3208413 - 3208490
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||| |||||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3208413 gaggattggttttgccatccaaaaaggtttagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataat 3208490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 27502378 - 27502269
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    ||||||||||||||||||  | |||| ||| |||||||||||| ||||||||||||| || |||||||||||||| | || |||||||||||| ||| ||    
T  27502378 tgttgaccttctacatagaatccaaagggttatgcatagcaatatcatgtctcctagatctatgaatgttgtgtttacgaagattgattttgcaatccaa 27502279  T
Q  107 aaaggtctag 116  Q
    ||||||||||    
T  27502278 aaaggtctag 27502269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 42122755 - 42122666
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataat 174  Q
    ||||| || |||||||||| ||||| ||||||||| ||||||| |||| ||||||||||||||||||||||||||||| || ||||||||    
T  42122755 gaggactggttttgccatccaaaaaagtctagcggcgcagcttattgttcgcttgccttctattcaagtgtaaataatggtttatataat 42122666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44686438 - 44686348
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggatt 91  Q
    |||| |||||||||||||||||||  | |||| ||| |||||||||||||| ||||||||||||||| ||||||||||||| | |||||||    
T  44686438 agagtttgttgaccttctacatagattccaaagggttatgcatagcaatgttatgtctcctaggtccgtgaatgttgtgtttacgaggatt 44686348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 3825743 - 3825639
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    |||||||||||| |||| | |||||||   ||||||||||||||||||||||| ||||| |||| ||||||||||| |||| ||| ||||||| |||| |    
T  3825743 ttgttgaccttcaacatcgagttcaaagaatcatgcatagcaatgtcatgtcttctaggaccataaatgttgtgtttatgaagatcgattttgtcatcca 3825644  T
Q  106 aaaag 110  Q
    |||||    
T  3825643 aaaag 3825639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 27494292 - 27494184
Alignment:
Q  42 atagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgcc 141  Q
    |||||||||| |||||||||| ||| |||||| ||||||| | ||  |||| |||||||||| ||||||||||| ||| ||||||||||| | |||||||    
T  27494292 atagcaatgttatgtctcctaagtctatgaatattgtgtttacgaatattggttttgccatccaaaaaggtctaacggcgcagcttgttgcctgcttgcc 27494193  T
Q  142 ttctattca 150  Q
    | |||||||    
T  27494192 tcctattca 27494184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 20143123 - 20143201
Alignment:
Q  94 ttttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||||||| ||||||||||||||| ||| ||||||||| | ||||||||||||||| |||||||||| || ||||||    
T  20143123 ttttgccatccaaaaaggtctagcggcgcaacttgttgtctgtttgccttctattcaaatgtaaataatggtttatata 20143201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 23485038 - 23485172
Alignment:
Q  18 tacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc-atctaaaaaggtctag 116  Q
    ||||||| ||||||||| ||||||||| |||||  |||||||||||||||||||| |||||||| |  |  |||| ||||||| | | |||||||| |      
T  23485038 tacatagagttcaaaagatcatgcataacaatgctatgtctcctaggtccatgaacgttgtgtttacaaaaattggttttgccaaccaaaaaaggtttga 23485137  T
Q  117 cggtgcagcttgttgtccgcttgccttctattcaa 151  Q
    ||| ||||||||||||| ||||||||| |||||||    
T  23485138 cggcgcagcttgttgtcggcttgccttttattcaa 23485172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 2626001 - 2626094
Alignment:
Q  70 gaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    |||||||||||| | || |||| ||||  | ||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||    
T  2626001 gaatgttgtgtttacgaagattaatttaactatctacaaaggtctaacggcgcagcttgttgtccgcttgccttctattcatgtgtaattaatt 2626094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 20142815 - 20142875
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtc 66  Q
    ||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  20142815 ttgttgaccttatacatagagttcaaaaggtcatacataacaatgtcatgtctcctaggtc 20142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 1296175 - 1296293
Alignment:
Q  14 cttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtc 113  Q
    ||||||| ||| ||||||| |||||||||||| ||| |||||| ||||  ||| ||||||||| |||| ||||| |||| |||| | ||| |||||||||    
T  1296175 cttctacgtagagttcaaagggtcatgcatagtaatatcatgtttcctgtgtctatgaatgttttgtttatgagaattggttttacaatccaaaaaggtc 1296274  T
Q  114 tagcggtgcagcttgttgt 132  Q
    ||  ||||||| |||||||    
T  1296275 taaaggtgcagtttgttgt 1296293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 44684955 - 44685053
Alignment:
Q  13 ccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaagg 111  Q
    |||||||||||| ||||||| ||||||||||| |||| | ||||||  || |||||||||||||||||| ||||| |||  ||||  ||||||||||||    
T  44684955 ccttctacatagagttcaaagggtcatgcataacaatattatgtcttataagtccatgaatgttgtgtttatgagaattagttttttcatctaaaaagg 44685053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 30602427 - 30602350
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||| |||||||||| ||||||| ||||| | ||||||||||| |||| ||||||||||||| |||||| ||||    
T  30602427 gaggattggttttgccatccaaaaaggcctagcagcgcagcttgttgcccgcatgccttctattcatgtgtaattaat 30602350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34814903 - 34814967
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggt 65  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||| |||||| ||||||| |||||    
T  34814903 agagactgttgaccttctacatagagttcaaatggtcatgcataacaatgttatgtctcttaggt 34814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 41702209 - 41702133
Alignment:
Q  86 aggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||| |||||||||| ||||||| |||| || ||||||||||| || ||||||||||||||| |||||| ||||    
T  41702209 aggattggttttgccatccaaaaaggcctagtggcgcagcttgttgcccacttgccttctattcatgtgtaagtaat 41702133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 5532437 - 5532296
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||| ||||||||||| ||||||| ||||||||| | ||||| |||| |||||| || |||||||| |||||| |  ||||||||||||  |||| |    
T  5532437 ttgttgagcttctacatagagttcaaagggtcatgcacaacaatgccatgactcctaagttcatgaatg-tgtgtttacaaggattgattttctcatcca 5532339  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    ||| || ||| ||| ||| |||||| || | ||| ||||||||    
T  5532338 aaacggcctaacggcgcaacttgttatctgtttgtcttctatt 5532296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7760930 - 7761040
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| | |||||| ||||||||| ||||||| || || || ||||| |||| | | ||  |||||||||| |    
T  7760930 agaggttgttgaccttctacatagagttcaaaggatcatgcgtagcaatgtgatgtctcataagttcaagaatgatgtgcttacgaaaattgattttgac 7761029  T
Q  101 atctaaaaagg 111  Q
    ||| |||||||    
T  7761030 atccaaaaagg 7761040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 40252159 - 40252210
Alignment:
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||| ||||||    
T  40252159 aaaaggtctggcggtgcagcttgttgtacgcttgccttctgttcatgtgtaa 40252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 2248586 - 2248492
Alignment:
Q  79 gttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    |||||||| ||||| |||| |||||||||||| || |||||  ||   ||||  ||||||||||||| |||||||||||||||| || |||||||    
T  2248586 gttcatgatgattggttttaccatctaaaaagatccagcggcacaatctgttacccgcttgccttctgttcaagtgtaaataatggtttatataa 2248492  T

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Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 11921301 - 11921436
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||| ||| ||      |||| | || ||| |||||||||||||||||||||| |  ||||||  ||| |||||| ||    
T  11921301 tgttgaccttctacatagagttcaaagggttat------caattttatatcttctaggtccatgaatgttgtgtttactaggattagtttcgccatccaa 11921394  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    |||| |||||||  ||||||||||  |||||| ||| |||||    
T  11921395 aaagatctagcgtcgcagcttgttacccgcttccctcctatt 11921436  T

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Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13147185 - 13147295
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||||||||||||||||| ||||  || |||| |||| |||| | ||||||| ||||| ||| || ||||||| |||| || | ||  |||||||||| |    
T  13147185 agagattgttgaccttcttcatatagtacaaagggtcgtgcacaacaatgtcttgtcttctaagttcatgaatattgtatttacgaaaattgattttgtc 13147284  T
Q  101 atctaaaaagg 111  Q
    |||||||||||    
T  13147285 atctaaaaagg 13147295  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 24765255 - 24765181
Alignment:
Q  29 caaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatc 103  Q
    |||| |||||| |||| |||||||||||||| |||||||||||||||| || | |||| |||| |||||| ||||    
T  24765255 caaagggtcatccataacaatgtcatgtctcttaggtccatgaatgttctggttatgatgattaattttggcatc 24765181  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 32612331 - 32612409
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttcta-ttcaagtgtaaataat 162  Q
    |||||||| ||||||||||| ||||||||  |||  |||| |||||| |||||||||||||| || |||||||||||||    
T  32612331 gaggattggttttgccatctgaaaaggtccggcgacgcagtttgttgcccgcttgccttctattttaagtgtaaataat 32612409  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 10587144 - 10587201
Alignment:
Q  105 aaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||||||||| | ||||||||| ||| |||||||||||||| |||||| ||||    
T  10587144 aaaaaggtctagcggcgtagcttgttgcccgtttgccttctattcatgtgtaagtaat 10587201  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 20142871 - 20142935
Alignment:
Q  33 aggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttg 98  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||||| | ||| |||| |||||    
T  20142871 aggtcatgcataacaatgtcatgtctcctaggt-catggatgttgtgttgacgagtattggttttg 20142935  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3262244 - 3262336
Alignment:
Q  18 tacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaag 110  Q
    ||||||| ||||||| |||| |||| | || ||||||| ||| ||||||||| ||| || |||| | ||| ||||||||||||||| ||||||    
T  3262244 tacatagagttcaaagggtcttgcacatcagtgtcatgactcataggtccataaatattatgtttacgagaattgattttgccatcaaaaaag 3262336  T

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Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 33612670 - 33612710
Alignment:
Q  41 catagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  33612670 catagcaatgtcttgtcccctaggtccatgaatgttgtgtt 33612710  T

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Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2888538 - 2888463
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgtt 76  Q
    |||| |||||||||||||||| | ||||||||| |||||||| | ||||||||| |||| ||  ||||| ||||||    
T  2888538 agaggttgttgaccttctacacaaggttcaaaatgtcatgcacaacaatgtcatatctcttaaatccataaatgtt 2888463  T

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Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 4849733 - 4849686
Alignment:
Q  115 agcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||| ||||||| || ||| |||||||||||||||||||||||    
T  4849733 agcggtgcaacttgttgcccacttaccttctattcaagtgtaaataat 4849686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 32029177 - 32029228
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtct 58  Q
    |||||||||||||||||| |||||||  ||||| |||| |||||||||||||    
T  32029177 tgttgaccttctacatagagttcaaagagtcatccataacaatgtcatgtct 32029228  T

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Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 24762900 - 24762974
Alignment:
Q  29 caaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatc 103  Q
    |||| |||||| |||| |||||||||||||| ||||||||||| |||| || | |||| |||| |||||| ||||    
T  24762900 caaagggtcatccataacaatgtcatgtctcttaggtccatgagtgttctggttatgatgattaattttggcatc 24762974  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8036567 - 8036635
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatag--caatgtcatgtctcctaggtcc 67  Q
    |||| ||||||||||| ||||||| ||||||| | | |||||||   ||||||||||||||||||||||    
T  8036567 agaggttgttgaccttttacatagagttcaaaggtttatgcatatatcaatgtcatgtctcctaggtcc 8036635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 38723985 - 38724038
Alignment:
Q  109 aggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||||||||||||||  ||||||||| ||||| | |||||| ||||    
T  38723985 aggtctagcggtgcagcttgttgctcgcttgcctcctatttatgtgtaagtaat 38724038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 13845384 - 13845436
Alignment:
Q  120 tgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||| |||||| |||||||| ||||||||| |||||||||||| | ||||||    
T  13845384 tgcagtttgttgcccgcttgctttctattcatgtgtaaataattttttatata 13845436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 21326929 - 21327094
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  21326929 tgttgaccttttacatagagttcaaaaggtcatgcatagcaatgttatgtctcctaggtccatgaatgttgtgttcacgaggattgattttgccatccaa 21327028  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  21327029 aaaggtctaacggcgcagcttgttgtctgcttgccttctattcaagtgtaaataatggtttatata 21327094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 25187016 - 25187187
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   | |||||||||| ||    
T  25187016 agaggttgttgaccttctatatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatgaatgttgtgttcccaatgattgattttacc 25187115  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  25187116 atctaaaaagatctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatata 25187187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 19277315 - 19277141
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcat--gaggattgattttg 98  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||  |||| |||||    
T  19277315 agaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacacgaaaattggttttg 19277216  T
Q  99 ccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    ||||| ||||||||||||||| ||||||| ||| |||| |||||||||||||| |||||||||| || |||||||    
T  19277215 ccatccaaaaaggtctagcggcgcagcttattgcccgcctgccttctattcaaatgtaaataatggtttatataa 19277141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 45613939 - 45614098
Alignment:
Q  13 ccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggt 112  Q
    |||||||||||| ||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| | |||||||| ||||||||||  |||||||    
T  45613939 ccttctacatagagttcaaaagttcatgcataacaatgtcaaatctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccgaaaaggt 45614038  T
Q  113 ctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  45614039 ctagcggcgcagcttgttgtccgcttgccttctattcaactgtaaataatggtttatata 45614098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 4501281 - 4501109
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| | |||||||   |||| |    
T  4501281 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgtttacgaggattagctttgtc 4501182  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    ||||||||||||||||| | ||| ||| ||||||||||||||| |||||||||||||||||| || |||||||    
T  4501181 atctaaaaaggtctagcagcgcatcttattgtccgcttgccttatattcaagtgtaaataatggtttatataa 4501109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 982971 - 982800
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||| |||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||||| | |||||    
T  982971 agaggttgttggccttctacatagagttcaaaaggtcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgttcacgaggattggtattgcc 982872  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| ||||||||||||||   |||||||||| | | ||||||||||||||||| |||||||| || ||||||    
T  982871 atccaaaaaggtctagcgacacagcttgttgcctgtttgccttctattcaagtttaaataatggtttatata 982800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 24527604 - 24527445
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||| ||||| |||| |||    
T  24527604 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatttctccttggtccatgaatgttgtattcacgaggattggttttgtcatccaaa 24527505  T
Q  108 aaggtctagcggtgcagcttgttgtcc-----gcttgccttctattcaagtgtaaataat 162  Q
    ||| |||||||| ||||||||||  ||     ||||||||| ||||||||||||||||||    
T  24527504 aagatctagcggcgcagcttgttacccacttagcttgccttttattcaagtgtaaataat 24527445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22198008 - 22197838
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||| | ||  |||||||||| |    
T  22198008 agaggttgttgaccttctacatagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgtttacgataattgattttgtc 22197910  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| |||||||  | |||||||| ||||||| ||||||| |||||||||||| ||||||||| || ||||||    
T  22197909 atccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttctattcaagagtaaataatggtttatata 22197838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22239813 - 22239983
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||| | ||  |||||||||| |    
T  22239813 agaggttgttgaccttctacatagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgtttacgataattgattttgtc 22239911  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| |||||||  | |||||||| ||||||| ||||||| |||||||||||| ||||||||| || ||||||    
T  22239912 atccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttctattcaagagtaaataatggtttatata 22239983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 40726565 - 40726721
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| || |||| ||| ||||||| |||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  40726565 agaggttgttgaccttctacatagagtccaaagggttatgcataacaatgctatgtctcctagatccatgaatgttgtgtttatgaggattgattttgcc 40726664  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    ||| ||||| ||||| |   ||||||||||| |||||||||| ||||||| ||||||    
T  40726665 atccaaaaatgtctaacatcgcagcttgttgcccgcttgcctcctattcatgtgtaa 40726721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 27521493 - 27521322
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||    
T  27521493 agaggttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaagtctatgaatgttgtgtttacgaggattgattttgcc 27521394  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| ||||| || |  | | ||||  ||||  ||  |||||||| ||||||||||||||||| || ||||||    
T  27521393 atcgaaaaatgtatgacagcgcaggctgttacccatttgccttccattcaagtgtaaataatggtttatata 27521322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 27027758 - 27027886
Alignment:
Q  44 agcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgcctt 143  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||| |||||||||| ||||||||  || ||||||||    
T  27027758 agcaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgctatccaaaaagatctagcggtgtagcttgttacccacttgcctt 27027857  T
Q  144 ctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||  ||||||||| || ||||||    
T  27027858 ctattcaaacgtaaataatagtttatata 27027886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 162
Target Start/End: Original strand, 45003019 - 45003143
Alignment:
Q  38 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgct 137  Q
    |||||||||||||| ||||||| |||| |||||||||||||||| | || |||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  45003019 atgcatagcaatgttatgtctcataggaccatgaatgttgtgtttacgaagattgattttgccatccaaaaaggtctagcggcgcagcttattgtccgct 45003118  T
Q  138 tgccttctattcaagtgtaaataat 162  Q
    ||||| ||||||| |||||| ||||    
T  45003119 tgcctcctattcatgtgtaagtaat 45003143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 45974731 - 45974858
Alignment:
Q  48 atgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctat 147  Q
    |||||||||||||||||| ||||||||||||||| |  |||||  |||||| |||| |||||||||||| || ||||||||||||||||||| |||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgtttacaaggataaattttgtcatccaaaaaggtctagtggcgcagcttgttgtccgcttgtcttctat 45974830  T
Q  148 tcaagtgtaaataattgtgtatataatt 175  Q
    ||||||||||||||| || |||||||||    
T  45974831 tcaagtgtaaataatggtttatataatt 45974858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 5825295 - 5825139
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||  ||| ||| |||||||||||||| |||||||||||||| ||| |||||||||| | |||||||| |||||||    
T  5825295 agaggttgttgaccttctacatagagtcgaaagggttatgcatagcaatgttatgtctcctaggtctatggatgttgtgtttacgaggattggttttgcc 5825196  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    ||| ||||||||||  ||| ||||||||||  | |||||||| ||||||| ||||||    
T  5825195 atcgaaaaaggtcttacggcgcagcttgttacctgcttgcctcctattcatgtgtaa 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 48539197 - 48539094
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| ||    
T  48539197 tgttgatcgtctacatagagtccaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaa 48539098  T
Q  107 aaag 110  Q
    ||||    
T  48539097 aaag 48539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 28517379 - 28517533
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| || |||| ||| ||||||| |||||| |||||||||| |||||||||||||||||| | |||||||| |||||||||| |||    
T  28517379 gttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatgttgtgtttacgaggattggttttgccatccaaa 28517478  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    || ||||||||   |||||||||| |||  ||||| ||||||| |||||| ||||    
T  28517479 aaagtctagcgacacagcttgttgcccgtctgcctcctattcatgtgtaagtaat 28517533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 41117860 - 41117978
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||| |    
T  41117860 ttgttaaccttctacatagagtttaaaagatcatgcatagcaatgtcatgtttcctaggtccatgaatgttgtgttcacgatgattgattttgctatcca 41117959  T
Q  106 aaaaggtctagcggtgcag 124  Q
    |||| ||| ||||| ||||    
T  41117960 aaaaagtccagcggcgcag 41117978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5972301 - 5972462
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| || || |||||||||||||| | |||||||  |||||||    
T  5972301 agaggttgttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcccagatctatgaatgttgtgtttacgaggattagttttgcc 5972400  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| ||||||  ||| || |||| ||| ||  |||  |||||||||||||||||||||||||    
T  5972401 atccaaaaagacctaacgatgcaacttatttcccgtatgccttctattcaagtgtaaataat 5972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23037567 - 23037457
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||| ||||| ||||||||||| ||| ||||||||||||||||| |||| |||||| |||||| ||||||| | ||||||||||||||||    
T  23037567 agaggttgttgaccatctacgtagggttcaaagggttatgcatagcaatgtcatttctcttaggtctatgaattttgtgtttacgaggattgattttgcc 23037468  T
Q  101 atctaaaaagg 111  Q
    |||||||||||    
T  23037467 atctaaaaagg 23037457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 10905134 - 10904978
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| |||||||  | |||||||| |||||||||||||||||||||||||||||| ||||| |  ||||||||| |  ||||| ||    
T  10905134 tgttgaccttctacatagagttcaaagagccatgcataacaatgtcatgtctcctaggtccatgaatgtcgtgtttacaaggattgatctgaccatccaa 10905035  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    ||||  ||||  | ||||||||||  || ||||| ||||||||| ||||||||||||    
T  10905034 aaagacctagtagcgcagcttgttaccctcttgcattctattcatgtgtaaataatt 10904978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 43856896 - 43856788
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| | |||||||||| |||||||||||||||||||| |||| | ||| |||||||||||     
T  43856896 agaggttgttgaccttctacatagagttcaaagggtcatgcacaacaatgtcatgactcctaggtccatgaatgttatgtttacgagaattgattttgct 43856797  T
Q  101 atctaaaaa 109  Q
    ||| |||||    
T  43856796 atccaaaaa 43856788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30216143 - 30216240
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttg 98  Q
    |||| ||||||| |||| |||||  ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  30216143 agagtttgttgatcttccacataaagttcaaatggtcatgcatagcaatgtcatatctcctaggtctatgaatgttgtgttcacgaggatcgattttg 30216240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 34772804 - 34772633
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||   ||||||| |||||||||| ||||||||||| | |||||||||||||| ||||||| | ||  |||| |||||||    
T  34772804 agaggttgttgaccttctacataaacttcaaaaagtcatgcatatcaatgtcatgttttctaggtccatgaatattgtgtttacgataattggttttgcc 34772705  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    ||  ||||| || || ||| |||  ||||| || ||||| |||||||| ||||||||||||| || |||||||    
T  34772704 attcaaaaaagtttaacggcgcaatttgttatctgcttgtcttctatt-aagtgtaaataatagtttatataa 34772633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 43333941 - 43334087
Alignment:
Q  27 ttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagct 126  Q
    |||||||||||||||||| ||||| |||||||||||| || |||||||||| ||| |||| ||||| |||||||||  ||||||   | |||| ||||||    
T  43333941 ttcaaaaggtcatgcatatcaatgacatgtctcctagatctatgaatgttgagtttatgatgattggttttgccattcaaaaagacttggcggcgcagct 43334040  T
Q  127 tgttg-tccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||  ||  |||| ||||||||||||||||||||| || ||||||    
T  43334041 tgttgccccttttgcattctattcaagtgtaaataatggtttatata 43334087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32584623 - 32584476
Alignment:
Q  1 agagattgttgaccttctacatagggttc-aaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgc 99  Q
    |||| |||||||||||||| |||| |||| ||||| ||||||||| |||||| ||||||| ||| || |||||||||||||| |  | |||||||||| |    
T  32584623 agaggttgttgaccttctagatagagttccaaaagatcatgcatatcaatgttatgtctcatagatcgatgaatgttgtgtttacaaagattgattttac 32584524  T
Q  100 catctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctat 147  Q
    |||| ||||||| ||||| | ||| ||||| | |||||||| ||||||    
T  32584523 catccaaaaaggcctagcagcgcaacttgtcgcccgcttgctttctat 32584476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 42295274 - 42295349
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    ||||||||||||||||||| ||||||||  ||||||||| || ||||||||||||||||||||||||| |||||||    
T  42295274 ttgttgaccttctacatagcgttcaaaatatcatgcataacattgtcatgtctcctaggtccatgaatcttgtgtt 42295349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 5715032 - 5714954
Alignment:
Q  31 aaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaa 109  Q
    ||||||||| |||| |||||| ||||||||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||    
T  5715032 aaaggtcatacataacaatgttatgtctcctaggtccataaatgttgtgtttatgaagattggttttgtcatctaaaaa 5714954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 9281221 - 9281370
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagca-----atgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||||||||||||||||| ||||||| ||||||| | ||||     |||||||| ||| || |||||| ||||||||||| | ||| |||| ||||||     
T  9281221 ttgttgaccttctacatagagttcaaagggtcatgtacagcacaacaatgtcatgactcttaagtccattaatgttgtgtttaggagaattggttttgca 9281320  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| |||||||  || |||||||| |||||||| |||| |||| ||||||    
T  9281321 atccaaaaaggcttaacggtgcagtttgttgtctgcttaccttatattca 9281370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 9292192 - 9292341
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagca-----atgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||||||||||||||||| ||||||| ||||||| | ||||     |||||||| ||| || |||||| ||||||||||| | ||| |||| ||||||     
T  9292192 ttgttgaccttctacatagagttcaaagggtcatgtacagcacaacaatgtcatgactcttaagtccattaatgttgtgtttaggagaattggttttgca 9292291  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| |||||||  || |||||||| |||||||| |||| |||| ||||||    
T  9292292 atccaaaaaggcttaacggtgcagtttgttgtctgcttaccttatattca 9292341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 44526001 - 44525860
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||| | |||||||||   ||||||| |||||||||||||||||  |||||||||||||||||       |||||||||||| | |||    
T  44526001 tgttgaccttctacatggagttcaaaagaatatgcataacaatgtcatgtctcctatatccatgaatgttgtgtt-------attgattttgccttttaa 44525909  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||  ||       ||||||||||||| ||| ||||||||||| ||||||||||    
T  44525908 aaaggctta-------agcttgttgtccgattgtcttctattcaattgtaaataat 44525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 38766258 - 38766185
Alignment:
Q  89 attgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||| |||||||||| ||||||||||||| | ||||||||||| |||||||||| ||||||| |||||| ||||    
T  38766258 attggttttgccatccaaaaaggtctagctgcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 38766185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 36558960 - 36559099
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    |||||| |||| ||||| ||| ||| |||||||||||  ||| ||||||||  ||||||||||||||||||||| | || || ||||||||| |||||||    
T  36558960 gttgactttctccatagagtt-aaatggtcatgcatataaatatcatgtcttataggtccatgaatgttgtgtttacgatgaatgattttgctatctaaa 36559058  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    ||| || |||| || |   |||||| | |||||||||||||    
T  36559059 aagatccagcgatgtaatatgttgttcacttgccttctatt 36559099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 2520918 - 2520967
Alignment:
Q  113 ctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  2520918 ctagcggcgcagcttgttgtccgcttgccttctattcatgtgtaattaat 2520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 32682003 - 32682059
Alignment:
Q  116 gcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  32682003 gcggcgcagcttattgtccacttgccttctattcaagtgtaaataatggtttatata 32682059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 38832225 - 38832175
Alignment:
Q  100 catctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||| ||||||||||||||| ||||||||||| |||||||||| |||||||    
T  38832225 catccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattca 38832175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 48539284 - 48539326
Alignment:
Q  133 ccgcttgccttctattcaagtgtaaataattgtgtatataatt 175  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  48539284 ccgcttgccttctattcaagtgtaaataatggtttatataatt 48539326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 2904353 - 2904242
Alignment:
Q  50 gtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattc 149  Q
    |||||| |||||||||| |||||||||||||| | ||  |||| |||||| ||| |||||||| ||| || | ||||||||||| |  || |||||||||    
T  2904353 gtcatgactcctaggtctatgaatgttgtgtttacgataattggttttgctatccaaaaaggt-tagtggcgtagcttgttgtctgtatgtcttctattc 2904255  T
Q  150 aagtgtaaataat 162  Q
    | |||||| ||||    
T  2904254 atgtgtaattaat 2904242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 23793029 - 23792941
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgat 94  Q
    |||||||||||||| |||  ||||||| | |||| ||||| ||||| |||||||||||||| || ||| ||||||| |  |||||||||    
T  23793029 ttgttgaccttctaaatacagttcaaaggatcatacatagtaatgtaatgtctcctaggtctataaatcttgtgtttacaaggattgat 23792941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 29054816 - 29054729
Alignment:
Q  56 tctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgcctt 143  Q
    ||||||||||| |||||||| || || | |||||||| |||||||||| | |||||  |||||| ||||||| |||  ||||||||||    
T  29054816 tctcctaggtctatgaatgtagtttttaagaggattggttttgccatccataaaggattagcggcgcagcttattgctcgcttgcctt 29054729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 34856800 - 34856749
Alignment:
Q  88 gattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttg 139  Q
    ||||||||||| |||||||||||||||||||| ||| ||| || ||||||||    
T  34856800 gattgattttgtcatctaaaaaggtctagcggcgcaacttattatccgcttg 34856749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 38766294 - 38766259
Alignment:
Q  38 atgcatagcaatgtcatgtctcctaggtccatgaat 73  Q
    |||||||||||||| |||||||||||||||||||||    
T  38766294 atgcatagcaatgttatgtctcctaggtccatgaat 38766259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 38839313 - 38839234
Alignment:
Q  36 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtcta 115  Q
    ||||||||| ||||||||||| |   |||||||||||||||||||| | || ||||| |||| ||||| ||||| |||||    
T  38839313 tcatgcataacaatgtcatgtttatcaggtccatgaatgttgtgtttacgaagattggttttaccatccaaaaatgtcta 38839234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 6635086 - 6635128
Alignment:
Q  39 tgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    |||||| |||||||||||||||||| ||||| |||||||||||    
T  6635086 tgcataacaatgtcatgtctcctagatccataaatgttgtgtt 6635128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 7637625 - 7637698
Alignment:
Q  31 aaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt-catgaggattgattttgccatc 103  Q
    |||| ||||||||| ||||||  ||||| ||||||| |||||||| || || || |||||||||||||||||||    
T  7637625 aaagttcatgcataacaatgttgtgtcttctaggtctatgaatgtagtttttcaagaggattgattttgccatc 7637698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 36931892 - 36931936
Alignment:
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||| ||||||||| |||||||||| ||||||||||| |||||||    
T  36931892 aaaaagtctagcggcgcagcttgttatccgcttgcctcctattca 36931936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 37317863 - 37317911
Alignment:
Q  67 catgaatgttgtgttcatgaggattgattttgccatctaaaaaggtcta 115  Q
    ||||||| |||| || | ||||||||||||||| |||||||||||||||    
T  37317863 catgaatattgtatttaagaggattgattttgcaatctaaaaaggtcta 37317911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 41767698 - 41767730
Alignment:
Q  130 tgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||||||||||||| ||||||||||    
T  41767698 tgtccgcttgccttctattcaaatgtaaataat 41767730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 32546811 - 32546646
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  32546811 tgttgaccttctacatagagttcaaaaagtcatgcatagtaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgccatccaa 32546712  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  32546711 aaaggtctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatata 32546646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 53785731 - 53785560
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||||||    
T  53785731 agaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttatgtttacgaggattggttttgcc 53785632  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| || |||||| ||||| | ||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  53785631 atccaacaaggtccagcggcgtagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatata 53785560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 44852 - 44694
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatg---ttgtgttcatgaggattgattttgccatc 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||  ||||||  ||||||||||    
T  44852 tgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtttcctaggtccatgaatgttgttgtgttcacaaggatttgttttgccatc 44753  T
Q  104 taaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
     ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  44752 caaaaaggtctagcggcgcagtttgttgcccgcttgccttctattcaagtgtaaataat 44694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 39583319 - 39583475
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||||||||| |    
T  39583319 ttgttgaccttctgcatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgtgtttacgaggattgattttgccatcca 39583418  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||||| ||| ||||||||| |||||| ||||||||| |||||| ||||    
T  39583419 aaaaggtctagcggcgcaacttgttgtctgcttgctttctattcatgtgtaagtaat 39583475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 44198783 - 44198628
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||   ||  ||||||||||||||| ||    
T  44198783 tgttgaccttctacatagagttcagaaggttatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttgcgataattgattttgccatccaa 44198684  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||  ||||   |||||||||||||||||||||||||||||||||||||||||    
T  44198683 aaaggttgagcgacacagcttgttgtccgcttgccttctattcaagtgtaaataat 44198628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 37133084 - 37133243
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||  |||||||||||||| || ||||||| ||||||     
T  37133084 agaggttgttgaccttctacatagagttctaaaggtcatgcatagcaatgtcatgtctcctaagttaatgaatgttgtgtttataaggattggttttgcg 37133183  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaata 160  Q
    ||| ||||||||||||||| |||| |||||||||  ||| |||||||||| |||||||||    
T  37133184 atccaaaaaggtctagcggcgcagtttgttgtcccattgtcttctattcaggtgtaaata 37133243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 52741597 - 52741768
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||  || |||| |||| || ||||  |||||||    
T  52741597 agaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatttatcttgtattcacgaagatttgttttgcc 52741696  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| ||||||||||||||  ||| ||| ||| ||||| |||||||||||||||||||||||| || ||||||    
T  52741697 atccaaaaaggtctagcgacgcaacttattgcccgctcgccttctattcaagtgtaaataatggtttatata 52741768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 26772773 - 26772619
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    |||||||||||| |||| || |||| | | ||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||    
T  26772773 gttgaccttctatatagagtacaaaggattatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattttgccatccaaa 26772674  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  26772673 aaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 26772619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 13582528 - 13582371
Alignment:
Q  5 attgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatct 104  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | || ||||||||| ||||||     
T  13582528 attgttgaccttctacagagagttcaaaaggtcatgcataacaatgtcatgtctcctaggaccatgaatgttgtgtttacgaagattgatttagccatcc 13582429  T
Q  105 aaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||| ||||||  || | || ||| ||||||||||||||||||||| ||||||||    
T  13582428 aaaaaggcctagcgacgctgtttattgcccgcttgccttctattcaagtctaaataat 13582371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 38670974 - 38671126
Alignment:
Q  10 tgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaa 109  Q
    ||||||||||||||| ||  |||  || |||||||||||||| ||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||    
T  38670974 tgaccttctacatagagtctaaagagttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtgtacgaggattggttttgccatctaaaaa 38671073  T
Q  110 ggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
     ||||||||| |||||||||||||||||| ||| ||||| | |||||||||||    
T  38671074 agtctagcggcgcagcttgttgtccgcttacctcctatttatgtgtaaataat 38671126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 49017980 - 49017828
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||| ||||||| ||  |||||||||||||||||||  ||||||||||    |||||| |||||||||||||| ||||||||||||||||||||| |    
T  49017980 ttgttgatcttctacgtaaagttcaaaaggtcatgcatataaatgtcatgt----taggtcaatgaatgttgtgtttatgaggattgattttgccatcca 49017885  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  49017884 aaaagtatcggcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 49017828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 4763888 - 4764048
Alignment:
Q  11 gaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaag 110  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | |||||||    |||||||| ||||||    
T  4763888 gaccttctacatagagttcaaaaggttatgcatagcaatgtcatgtctcct-ggtccatgaatgttgtgtttacgaggattagaattgccatccaaaaag 4763986  T
Q  111 gtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |  | | || ||| ||||||| |||||||||||||||||||||||||||||| || ||||||    
T  4763987 gcttggtggcgcaacttgttgcccgcttgccttctattcaagtgtaaataatggtttatata 4764048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26856847 - 26856992
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |   |||||||| |||| ||    
T  26856847 agagactgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgaggattggttttacc 26856946  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttcta 146  Q
    ||| ||||||| ||||||| |||||||||||  |||||||||||||    
T  26856947 atccaaaaaggcctagcggcgcagcttgttgctcgcttgccttcta 26856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 26276577 - 26276461
Alignment:
Q  61 taggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttct-----attcaagtgt 155  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||||||      ||||||||||    
T  26276577 taggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaagatctagcggtgtagcttgttgcccgcttgccttcacttcaattcaagtgt 26276478  T
Q  156 aaataattgtgtatata 172  Q
    ||||||| || ||||||    
T  26276477 aaataatggtttatata 26276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 4669788 - 4669910
Alignment:
Q  41 catagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgc 140  Q
    |||| |||||||||||||||| ||||||||||||||||||| | || |||||||||||  ||| |||||||| | |||| ||||||||||| ||||||||    
T  4669788 cataacaatgtcatgtctccttggtccatgaatgttgtgtttacgatgattgattttgttatccaaaaaggtttggcggcgcagcttgttgcccgcttgc 4669887  T
Q  141 cttctattcaagtgtaaataatt 163  Q
    |||  ||| ||||||||||||||    
T  4669888 ctttgattaaagtgtaaataatt 4669910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5338665 - 5338552
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||| |||||| ||||||   |||||||||||| | |||||||| |||||||    
T  5338665 agagattgttgacattctacatagagttcaaaaggtcatgcgtagcaatgtcttgtctcataggtc---gaatgttgtgtttacgaggattggttttgcc 5338569  T
Q  101 atctaaaaaggtctagc 117  Q
    ||| |||| ||||||||    
T  5338568 atccaaaatggtctagc 5338552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38146078 - 38145969
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||| || |||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||||||||||| |    
T  38146078 agaggttgtttacattctacttagagttcaaagggtcatgcataacaatgtcatgtctcctaggtccatgaacgttgtgtttacgatgattgattttgtc 38145979  T
Q  101 atctaaaaag 110  Q
    ||||||||||    
T  38145978 atctaaaaag 38145969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21552690 - 21552525
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagca----atgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattt 96  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |    || |||| |||||||||||||||||||||||||| |  || |||| |||    
T  21552690 agagactgttgaccttctacatagagttcaaaaggtcatgcatagtacgtaatatcatatctcctaggtccatgaatgttgtgtttacaagaattggttt 21552591  T
Q  97 tgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    || |||| ||||||   |  ||| ||| ||||||| ||| || |||||||||||||||||||||||    
T  21552590 tgacatccaaaaagacttgacggcgcaacttgttgcccgtttaccttctattcaagtgtaaataat 21552525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 52411983 - 52412086
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||  |||| ||| ||||||| |  | |||||||||||||||| |||    
T  52411983 gttgaccttctacatagagttcaaagggtcatgcataacaatgtcatgtctcctagacccataaatattgtgtttacaatgattgattttgccatccaaa 52412082  T
Q  108 aagg 111  Q
    ||||    
T  52412083 aagg 52412086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 4473073 - 4472923
Alignment:
Q  12 accttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaagg 111  Q
    ||||||||||||  |||||||   |||||||||||||| |||||||||||||||| |||||| ||||||| | ||| |||| ||||| |||| ||||| |    
T  4473073 accttctacataaagttcaaagaatcatgcatagcaatttcatgtctcctaggtctatgaatattgtgtttacgagaattggttttgtcatccaaaaaag 4472974  T
Q  112 tctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||  | |  |||||||| |||||||| |||||||||| |||||| ||||    
T  4472973 tctaatgatatagcttgttatccgcttgtcttctattcatgtgtaagtaat 4472923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3443397 - 3443499
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| |||||||| ||| |||||| |||||||||  || |||||||||||||| | || ||||| |||||||    
T  3443397 agaggttgttgaccttctacatagagttcaaagggtcatgcgtaggaatgtcttgtctcctaaatctatgaatgttgtgtttacgatgattggttttgcc 3443496  T
Q  101 atc 103  Q
    |||    
T  3443497 atc 3443499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 25094665 - 25094767
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    |||||||||||||||  ||||||| |||||||||||||||||| || |||  || |||||||||||||||||||| || ||||  |||||| ||||||||    
T  25094665 ttgaccttctacatatagttcaaatggtcatgcatagcaatgtaatatcttttaagtccatgaatgttgtgttcacgaagattagttttgcaatctaaaa 25094764  T
Q  109 agg 111  Q
    |||    
T  25094765 agg 25094767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 25325049 - 25324943
Alignment:
Q  3 agattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccat 102  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||| || |||||  ||||||||| ||||| | | || ||||| |||||||||    
T  25325049 agattgttgaccttctacatagagttcaaatgatcatgcatagcaatgtcaagtttcctaaatccatgaatattgtgcttacgatgattgcttttgccat 25324950  T
Q  103 ctaaaaa 109  Q
    | |||||    
T  25324949 ccaaaaa 25324943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 8592128 - 8592001
Alignment:
Q  35 gtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtcc 134  Q
    |||||||||| |||||||| | || |||||||||| ||| ||||||| | | ||||||||||||||||| ||||||| | ||||| ||||||||||  ||    
T  8592128 gtcatgcatatcaatgtcacgccttctaggtccatcaatattgtgttta-gcggattgattttgccatccaaaaaggcccagcggcgcagcttgttaccc 8592030  T
Q  135 gcttgccttctattcaagtgtaaataatt 163  Q
     |||||||| |||||| |||||| |||||    
T  8592029 acttgccttatattcatgtgtaagtaatt 8592001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 46940871 - 46941019
Alignment:
Q  14 cttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtc 113  Q
    ||||||||||| ||||||| | |||||||   |||||||||| ||| ||||| ||||||||||||||| | ||  ||||||||||  ||| ||||||  |    
T  46940871 cttctacatagagttcaaaggatcatgcacgacaatgtcatgactcataggttcatgaatgttgtgtttacgaaaattgattttgttatccaaaaagacc 46940970  T
Q  114 tagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||| ||||||| | | || ||||||||||| |||||| ||||    
T  46940971 tagcggtgcaacttgttgcctgtttaccttctattcatgtgtaattaat 46941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 3643148 - 3643028
Alignment:
Q  26 gttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagc 125  Q
    ||||||| | ||||||||| ||||||||||| |  |||||||||||||||||||||  ||| ||||||||||| ||||  |||||| ||| ||  |||||    
T  3643148 gttcaaaggatcatgcataacaatgtcatgttttttaggtccatgaatgttgtgtt--tgatgattgattttgtcatccgaaaaggcctaacgacgcagc 3643051  T
Q  126 ttgttgtccgcttgccttctatt 148  Q
    || ||| ||||||||||||||||    
T  3643050 ttattgcccgcttgccttctatt 3643028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 38978891 - 38979045
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||  ||||||||||| ||||||| |||||||||||||| |||||  || ||||||||||| | ||  |||  |||||||||| |||    
T  38978891 gttgaccttctacatatagttcaaaaggtgatgcataacaatgtcatgtctcataggtttatcaatgttgtgtttacgaaaattagttttgccatccaaa 38978990  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||  || |   ||| ||||||| ||| | | ||| ||||||||||||||||||    
T  38978991 aaggcttaacaacgcaacttgttgcccgttagtcttatattcaagtgtaaataat 38979045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 3376880 - 3376952
Alignment:
Q  58 tcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgtt 130  Q
    ||||| ||| |||||||||||||| |||| ||||||||||| ||||||||||| |||| ||||||||||||||    
T  3376880 tcctatgtctatgaatgttgtgtttatgatgattgattttgtcatctaaaaagatctaacggtgcagcttgtt 3376952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 51234638 - 51234563
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgtt 76  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||| | |||| ||||||    
T  51234638 agaggttgttgaccttctacatagagttcaaaaggttatgcataacaatgttatgtctcctaagcccattaatgtt 51234563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 2601787 - 2601690
Alignment:
Q  65 tccatgaatgttgtgttcatgaggattgattttgcca-tctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||| |||||||| | ||||||||||||||||| | ||||||| |||| || |||||||||||||||| ||| |||||||||| |||||| ||||    
T  2601787 tccatgaacgttgtgtttacgaggattgattttgccactgtaaaaag-tctaacgatgcagcttgttgtccgtttgtcttctattcatgtgtaattaat 2601690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 42206081 - 42205979
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    ||||| |||||||||| ||| ||| |||||||||||| ||||| |||| |||||| ||||| || |||||||| | || ||||||||||  ||||| |||    
T  42206081 ttgacattctacatagagtttaaatggtcatgcatagaaatgtaatgtatcctagatccataaacgttgtgtttacgatgattgattttatcatcttaaa 42205982  T
Q  109 agg 111  Q
    |||    
T  42205981 agg 42205979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37992354 - 37992218
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||||||||||||| || ||||||  ||||||||| || ||||||||| ||| || || |||||||||||||||   || ||||| ||||  |    
T  37992354 agaggttgttgaccttctacaaagagttcaag-ggtcatgcacagtaatgtcatgactcgtacgtgcatgaatgttgtgttttcgaagattggttttatc 37992256  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgctt 138  Q
    ||| |||||| ||||| ||| ||||||  |||||||||    
T  37992255 atccaaaaagatctagtggtacagcttagtgtccgctt 37992218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54508469 - 54508549
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    |||| ||||||||||||| |||| ||| |||| | |||||| || |||| |||| ||| ||||||||||||||||||||||    
T  54508469 agaggttgttgaccttctgcataaggtacaaaggatcatgcgtaacaatatcatatctgctaggtccatgaatgttgtgtt 54508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 39661372 - 39661447
Alignment:
Q  103 ctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataatttat 178  Q
    |||||||||  | |||| ||||||||||| |||| ||| ||||||||||||||||||||| || |||||| |||||    
T  39661372 ctaaaaaggcttggcggcgcagcttgttgcccgcgtgctttctattcaagtgtaaataatggtttatatattttat 39661447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 26393812 - 26393890
Alignment:
Q  42 atagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggt 120  Q
    |||||||| | ||||||||| |||| |||||||||||||| | |||||||||| || ||||| || ||||| |||||||    
T  26393812 atagcaatattatgtctccttggtctatgaatgttgtgtttacgaggattgatatttccatccaacaaggtttagcggt 26393890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 4537677 - 4537561
Alignment:
Q  27 ttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagct 126  Q
    |||||||||  ||||||||||||||  ||| | ||||||| ||||||||||| || | |||||||| |||  |||||||||||||| |||| || ||| |    
T  4537677 ttcaaaagggtatgcatagcaatgttgtgttttctaggtctatgaatgttgt-tttaagaggattggtttcaccatctaaaaaggtttagccgttcagtt 4537579  T
Q  127 tgttgtccgcttgccttc 144  Q
    |  ||||||||| |||||    
T  4537578 tagtgtccgcttaccttc 4537561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 45048653 - 45048702
Alignment:
Q  66 ccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtcta 115  Q
    |||||||| ||||||| |||||||||||||||||||| |||||| |||||    
T  45048653 ccatgaatattgtgtttatgaggattgattttgccatttaaaaaagtcta 45048702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 35484799 - 35484914
Alignment:
Q  35 gtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtcc 134  Q
    |||||| ||| |||||||| |||| ||||||  |||||||||||||  |  |||| | ||||||||||| |||||||||||| | ||  | ||||||  |    
T  35484799 gtcatgtataacaatgtcaagtcttctaggtatatgaatgttgtgtctacaaggaataattttgccatccaaaaaggtctagtgatgttgtttgttgctc 35484898  T
Q  135 gcttgccttctattca 150  Q
    ||||| ||||||||||    
T  35484899 gcttgtcttctattca 35484914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 7257655 - 7257721
Alignment:
Q  15 ttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    |||||||||  ||||||| ||  || ||||||||| |||||| | ||||||||||||||||||||||    
T  7257655 ttctacatatagttcaaagggctatccatagcaatatcatgtattctaggtccatgaatgttgtgtt 7257721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7502097 - 7502204
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||||||||||||| ||  || ||| ||||||||| | |||||||||| ||| ||| ||||||||| || |||| | ||  |||||||||||     
T  7502097 agaggttgttgaccttctacagag--tttaaagggtcatgcacaacaatgtcatgactcatagatccatgaatattatgtttacgataattgattttgct 7502194  T
Q  101 atctaaaaag 110  Q
    ||| ||||||    
T  7502195 atccaaaaag 7502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 32690966 - 32691060
Alignment:
Q  16 tctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaag 110  Q
    ||||||||| ||| |||  |||||||| |  ||| | |||||||||| ||| |||||||||||||| | |||||||||||||  |||| ||||||    
T  32690966 tctacatagagttaaaagagtcatgcacaataatattatgtctcctaagtctatgaatgttgtgtttaagaggattgattttatcatccaaaaag 32691060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 155
Target Start/End: Original strand, 2570794 - 2570823
Alignment:
Q  126 ttgttgtccgcttgccttctattcaagtgt 155  Q
    ||||||||||||||||||||||||||||||    
T  2570794 ttgttgtccgcttgccttctattcaagtgt 2570823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 4190854 - 4190826
Alignment:
Q  34 ggtcatgcatagcaatgtcatgtctccta 62  Q
    |||||||||||||||||||||||||||||    
T  4190854 ggtcatgcatagcaatgtcatgtctccta 4190826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 4191026 - 4190998
Alignment:
Q  34 ggtcatgcatagcaatgtcatgtctccta 62  Q
    |||||||||||||||||||||||||||||    
T  4191026 ggtcatgcatagcaatgtcatgtctccta 4190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7900880 - 7900812
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccat 69  Q
    |||| ||||||||||||||||||| |||  || | | || ||||||||||| |||| ||||||||||||    
T  7900880 agaggttgttgaccttctacatagagtttgaaggattatacatagcaatgttatgtttcctaggtccat 7900812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 25190027 - 25190119
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcca 101  Q
    ||||||||||||| || |||||||  |||||| |||| |||||  |||| |||| ||  ||||||||||| || | |||||||||||| ||||    
T  25190027 ttgaccttctacaaagagttcaaagagtcatgaatagaaatgtagtgtcgcctaagtatatgaatgttgtatttaagaggattgatttcgcca 25190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22346917 - 22346756
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||  |||||||    
T  22346917 agaggttgttgaccttctacacagagttcaaaaggtcatgcatagaaatgtcatgtctcctaggtttatgaatgttgtgttcacgaggattagttttgcc 22346818  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22346817 atccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaaataat 22346756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 24177602 - 24177757
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| | ||    
T  24177602 tgtttaccttctacatagagttcaaaaagtcatgcatagcaatgtcatatctcctaggtccatgaatgttgtgttcacgaggattggttttgccaaccaa 24177701  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24177702 aaaggtctagcggtgcagcttgttgcccgcttgtcttctattcaagtgtaaataat 24177757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 21473019 - 21472853
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||| ||    
T  21473019 tgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgcgttcaggaggactggttttgccatccaa 21472920  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    ||||||||||||| ||| ||| ||| |||||||| ||||||||||||||||||||| || |||||||    
T  21472919 aaaggtctagcggcgcaacttattgcccgcttgcattctattcaagtgtaaataatggtttatataa 21472853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 28041219 - 28041383
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||| ||||| |||    
T  28041219 gttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtcctctaagtccatgaatgttgtgctcatgaggattgatttttccatccaaa 28041318  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||||||||| | ||||||||||||||||| |||||||| ||||||||||||| || ||||||    
T  28041319 aaggtctagcggcggagcttgttgtccgcttgtcttctatttaagtgtaaataatggtttatata 28041383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 868512 - 868658
Alignment:
Q  25 ggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcag 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  868512 ggttcaaaaggtcatgcatagcaatgtcatgtctcctaagtccatgaat--tgtgttcacaaggattggttttgccatccaaaaaggtctagcggcgcag 868609  T
Q  125 cttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  868610 cttgttgcccgcttgccttctattcaagtgtaaataattgtttatataa 868658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 31737416 - 31737579
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    ||||| |||||||||| ||||||||||||||||||| |||||| |||| |||||| ||||||||| | ||||| | ||||||||||||||||||| ||||    
T  31737416 ttgacattctacatagagttcaaaaggtcatgcatatcaatgttatgtttcctagatccatgaat-tagtgtttacgaggattgattttgccatccaaaa 31737514  T
Q  109 aggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    |||  | |||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  31737515 aggcttggcggcgcagcttgttgtctgtttgccttctattcaagtgtaaataattgtttatataa 31737579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 20259882 - 20260041
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||  || ||||||||||| ||  |||||| |||||||    
T  20259882 agaggttgttgaccttctacatagagttcaaaaggtcatgcatagtaatgtcatgtctcataagttaataaatgttgtgtttatatggattggttttgcc 20259981  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaata 160  Q
    ||| ||||||||||||||| |||| |||||| ||  ||| ||||||||||||||||||||    
T  20259982 atccaaaaaggtctagcggcgcagtttgttgccccattgtcttctattcaagtgtaaata 20260041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2898724 - 2898563
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||| || |  ||||||||||||||| | ||||||||||||||||    
T  2898724 agaggttgttgaccttctacatagagttcaaaagatcatgcataacaatatcatgtctcatacgatcatgaatgttgtgtttaagaggattgattttgcc 2898625  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| |||||||  |||||| | |||||||| ||| |||| ||||||||||| ||||||||||    
T  2898624 atccaaaaaggcttagcggcgtagcttgttatccacttgtcttctattcaaatgtaaataat 2898563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34644588 - 34644441
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| || |||| ||| ||||||| |||||| ||||||||||||||||||||||||||||| | || |||||||||||||    
T  34644588 agaggttgttgaccttctacatagagtccaaagggttatgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgcc 34644489  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    ||| ||||| ||||||||| |||| |||||| |||||| ||| |||||    
T  34644488 atccaaaaaagtctagcggcgcagtttgttgcccgcttacctcctatt 34644441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7213272 - 7213104
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgag-------gattga 93  Q
    ||||| |||||| ||||| ||||  |||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||| ||        |||||     
T  7213272 agagactgttgagcttctgcataaagttcaaaatgtcatgcataataatgtcatgtcttctaggtccatgaatgttgtgttcacgaatcacgatgattgg 7213173  T
Q  94 ttttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||| ||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  7213172 ttttaccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaaataat 7213104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 28493477 - 28493577
Alignment:
Q  62 aggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataa 161  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||| |||||||||||||||||||||    
T  28493477 aggtccatgaatgttatgttcacgaggattgattttgccatccaaaaaggtctagcggcgcagtttgttgtccgtttgtcttctattcaagtgtaaataa 28493576  T
Q  162 t 162  Q
    |    
T  28493577 t 28493577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 4611161 - 4611050
Alignment:
Q  51 tcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||| |||| ||||||||||| | |  |||||||||||||||||||||| ||||||    
T  4611161 tcatgtctcctaggtccatgaatattgtgttcacgatgattgattttgtcatccaaaaaggtctaacagcacagcttgttgtccgcttgccttttattca 4611062  T
Q  151 agtgtaaataat 162  Q
    ||| ||||||||    
T  4611061 agtataaataat 4611050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 19035426 - 19035330
Alignment:
Q  76 tgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||||| |||||||| ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  19035426 tgtgttcacgaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgtccgattgccttctattcaagtgtaaataatggtttatata 19035330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 4862079 - 4862231
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattga-ttttgccatct 104  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||| ||| | ||| ||||||||||||||| | | ||||||||| ||||||||| |    
T  4862079 ttgttgaccttctacatagagttcaaagggtcatgcataacaatgtcacgtcccttagatccatgaatgttgtgattacgaggattgatttttgccatat 4862178  T
Q  105 aaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    |  |||| ||||||| ||||||||||| ||  |||| || |||||| ||||||    
T  4862179 atgaaggcctagcggcgcagcttgttgcccagttgctttgtattcatgtgtaa 4862231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 30688534 - 30688418
Alignment:
Q  46 caatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttct 145  Q
    |||||||||| ||||| ||||||||||||||||||| | |||||||| |||||  ||| ||||||| ||||||| ||||||||||| ||||||||| |||    
T  30688534 caatgtcatgactcctgggtccatgaatgttgtgtttacgaggattggttttgttatccaaaaaggcctagcggcgcagcttgttgcccgcttgccatct 30688435  T
Q  146 attcaagtgtaaataat 162  Q
    ||||| |||||| ||||    
T  30688434 attcatgtgtaattaat 30688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 1114023 - 1114125
Alignment:
Q  71 aatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtata 170  Q
    ||||||||||| | |||||||| |||||||||| ||||||||||| |||  |||||||||| ||||||| |||||||||||||||||||||| || ||||    
T  1114023 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctaacggcacagcttgttgcccgcttggcttctattcaagtgtaaataatggtttata 1114122  T
Q  171 taa 173  Q
    |||    
T  1114123 taa 1114125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2764501 - 2764372
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||  || |||| ||| ||||| | |||||| ||||||| ||||||||| ||||||||||| | || |||||||||| ||    
T  2764501 agaggttgttgaccttctacataaagtccaaagggttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgtttacgatgattgattttacc 2764402  T
Q  101 atctaaaaaggtctagcggtgcagcttgtt 130  Q
    ||| |||||||| |||||| ||||||||||    
T  2764401 atccaaaaaggtttagcggcgcagcttgtt 2764372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 5454057 - 5453956
Alignment:
Q  61 taggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaata 160  Q
    ||||||||||||||||||||| |  ||||||| ||||| |||| ||||||||||||||| ||||||||||| |||||||||| ||||||| |||||| ||    
T  5454057 taggtccatgaatgttgtgtttacaaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagta 5453958  T
Q  161 at 162  Q
    ||    
T  5453957 at 5453956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 47459697 - 47459549
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| || |||| |   |||||||||||||| |||||||||| ||| || ||||||||||| | ||| |||||||| |||||  |||    
T  47459697 gttgaccttctacatagagtccaaaggaatatgcatagcaatgttatgtctcctaagtctataaatgttgtgtttacgagaattgatttagccattcaaa 47459598  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    |||||||||| | ||||||||||||| ||||| || ||||||| ||||||    
T  47459597 aaggtctagc-gcgcagcttgttgtctgcttggctcctattcatgtgtaa 47459549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 162
Target Start/End: Original strand, 29170322 - 29170430
Alignment:
Q  54 tgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagt 153  Q
    |||||||||||||||||||||||| ||| |  |  |||  ||||||||| |||||||||||| |||||||| ||||| ||| ||||||||||||||||||    
T  29170322 tgtctcctaggtccatgaatgttgcgtttacaacaatttgttttgccatttaaaaaggtctaacggtgcagtttgttatccacttgccttctattcaagt 29170421  T
Q  154 gtaaataat 162  Q
    |||||||||    
T  29170422 gtaaataat 29170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 45835301 - 45835441
Alignment:
Q  31 aaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgtt 130  Q
    |||||||||| ||  || |||||| ||| ||||||| |||||||||||||| | ||||||||||||||||||| ||||| ||||||| | |||| || ||    
T  45835301 aaaggtcatgtattacattgtcatctcttctaggtctatgaatgttgtgtttacgaggattgattttgccatccaaaaa-gtctagctgcgcagtttatt 45835399  T
Q  131 gtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    | ||| || | ||||||||||||||||||||| || ||||||    
T  45835400 gcccgtttcctttctattcaagtgtaaataatggtttatata 45835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 45659739 - 45659847
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||  ||| ||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||| | |||||  | ||||| || | ||    
T  45659739 tgttgaccttcta--tagagttcaaaagatcatgcatagcaatgtcatgtctcctaggtcaataaatgtcgtgtttacgaggaccggttttgtcacccaa 45659836  T
Q  107 aaaggtctagc 117  Q
    |||||||||||    
T  45659837 aaaggtctagc 45659847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29169878 - 29169940
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctag 63  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  29169878 agaggttgttaaccttctacatagagttcaaaaggtcatgcacagcaatgtcatgtctcctag 29169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 48841174 - 48841328
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| ||  |||  || |||||||  ||||| ||||||||||  || |||||| || |||| | ||||||||||||||| ||| |||    
T  48841174 gttgaccttctacatagagtctaaagagttatgcataataatgttatgtctcctaaatctatgaatattatgtttacgaggattgattttgcaatccaaa 48841273  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    || ||||||| | ||| |||||||||||||| |||  |||||| |||||| ||||    
T  48841274 aaagtctagcagcgcaacttgttgtccgcttacctcatattcatgtgtaagtaat 48841328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38731631 - 38731526
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||| ||||||||||||| ||||||| ||||||||| |  ||||||||| ||||||||||||||||| ||||||| | |||  |||| |||| |    
T  38731631 agaggttgttaaccttctacatagagttcaaagggtcatgcacaataatgtcatgactcctaggtccatgaatattgtgtttacgagatttgactttgtc 38731532  T
Q  101 atctaa 106  Q
    ||||||    
T  38731531 atctaa 38731526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 44270091 - 44270008
Alignment:
Q  89 attgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||||||| ||||||||||||||||  ||||||| |||||| ||||||| ||| ||||||| |||||||||| || ||||||    
T  44270091 attgattttgtcatctaaaaaggtctaatggtgcagtttgttgcccgcttgtcttttattcaaatgtaaataatggtttatata 44270008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 17077971 - 17078072
Alignment:
Q  71 aatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtata 170  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||| ||| |||| |||||| ||| ||| || ||||  |||| |||||||| || ||||    
T  17077971 aatgttgtgttcatgatgattggttttgccatctaaaaaagtctaacggcgcagattgttgcccgtttgtctgctatgtaagtataaataatggtttata 17078070  T
Q  171 ta 172  Q
    ||    
T  17078071 ta 17078072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 50161569 - 50161656
Alignment:
Q  61 taggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    ||||||||||||||||||||| | ||||||||| ||||| |||||||| ||  ||||||  |||||||||| ||  ||||||||||||    
T  50161569 taggtccatgaatgttgtgtttaagaggattgaatttgctatctaaaacggcttagcggcacagcttgttgcccttttgccttctatt 50161656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 21934357 - 21934269
Alignment:
Q  44 agcaatgtcatgtctcctaggtccatgaatgtt-gtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttg 131  Q
    ||||||||  |||||||||| |||||||||||| || || | |||||||| |||||||||| |||||||  |||||| |||||||||||    
T  21934357 agcaatgttttgtctcctagttccatgaatgtttgtatttaagaggattggttttgccatccaaaaagggttagcggcgcagcttgttg 21934269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 35387747 - 35387802
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctccta 62  Q
    |||||| ||||||||||| ||||||| || |||||||| |||||||||||||||||    
T  35387747 tgttgatcttctacatagagttcaaagggacatgcatatcaatgtcatgtctccta 35387802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 33770767 - 33770721
Alignment:
Q  116 gcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||    
T  33770767 gcggcgcagcttattgtccgcttgccttccattcaagtgtaaataat 33770721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 6670208 - 6670337
Alignment:
Q  19 acatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcg 118  Q
    |||||| |||||||  |||||||||  ||||||||| |||||||| | |||||||||| | || | ||  ||| ||||||||||| |||||  | |||      
T  6670208 acatagagttcaaagagtcatgcattacaatgtcatatctcctagattcatgaatgttatatttacgataattaattttgccatccaaaaaaatatagta 6670307  T
Q  119 gtgcagcttgttgtccgcttgccttctatt 148  Q
    | ||| |||||||||| |||||||||||||    
T  6670308 gcgcaccttgttgtccacttgccttctatt 6670337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 31742485 - 31742546
Alignment:
Q  88 gattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattc 149  Q
    |||||||||||||||||||||||||| ||||  | | |||||||||| ||| ||||||||||    
T  31742485 gattgattttgccatctaaaaaggtccagcgacgtaacttgttgtcctcttaccttctattc 31742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 11128368 - 11128419
Alignment:
Q  30 aaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    ||||||||||||||| |||||| |||||||||||||| || |||| ||||||    
T  11128368 aaaaggtcatgcatatcaatgttatgtctcctaggtctataaatgatgtgtt 11128419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42919882 - 42919832
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgt 51  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||    
T  42919882 agagattgttaaccttctacatagagtttaaagggtcatgcagagcaatgt 42919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 5e-58; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 30940831 - 30940988
Alignment:
Q  15 ttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtct 114  Q
    |||||||||| ||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  30940831 ttctacatagagttcaaaaggtcatgcataacaatgtcatatatcctaggtctatgaatgttgtgttcatgaggattgattttgccatccaaaaaggtct 30940930  T
Q  115 agcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  30940931 agcgacgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatata 30940988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 53170529 - 53170364
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcc--taggtccatgaatgttgtgttcatgaggattgattttgccatct 104  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||| ||||    
T  53170529 tgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctataggt-catgaatgttgtgttcacgaggattgattttgctatct 53170431  T
Q  105 aaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| || ||||||    
T  53170430 aaaaaggtctagcagtgcagc-tgttgtctgcttgccttctattcaaatgtaaataatggtttatata 53170364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16955482 - 16955311
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||    
T  16955482 agaggttgctgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggcccatgaatgttgtgtttacgaggattgatttggcc 16955383  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| |||||| ||   ||  |||| ||||||||||||||||||||| ||||||||||||||| || ||||||    
T  16955382 atcaaaaaagatccgacgacgcagtttgttgtccgcttgccttctactcaagtgtaaataatggtttatata 16955311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 600777 - 600948
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||| | || ||||  |||||||    
T  600777 agaggttgttgaccttctacatagagttcaaaaggtcatgtataactatgtcatgtctcctaggtccattaatgctgtgtttacgatgattagttttgcc 600876  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| ||||| || |||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  600877 atccaaaaatgtatagcgacgtagcttgttgtccgcttgccttctattcaagtgtaaataattgtttatata 600948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 3330011 - 3329857
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| || |||| ||| |||||||||||||| |||||||||||||||||||||| |||||| | || ||||| |||||||||| |||    
T  3330011 gttgaccttctacatagagtccaaagggttatgcatagcaatgttatgtctcctaggtccatgaatgctgtgtttacgatgattggttttgccatccaaa 3329912  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  3329911 aaggtctagcggcgcagcttgttgcccgcttgcctcctattcacgtgtaagtaat 3329857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 34107787 - 34107942
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||||| ||||| |||| ||    
T  34107787 tgttgaccttctacatagagttcaaaaagtcatgcataacaatgttatgtctcctagatccatgaatgttgtgttcacgaggattggttttgtcatccaa 34107886  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| || || |||  |||||||||| || ||||  |||||||||||||||||||||    
T  34107887 aaaagtttaacggcacagcttgttgcccacttgttttctattcaagtgtaaataat 34107942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 50001018 - 50001172
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||  || |||| ||| |||||||||||||| ||||||||||| ||||| ||||||||||| | || |||||||||||||||| |||    
T  50001018 gttgaccttctacatatagtccaaagggttatgcatagcaatgttatgtctcctagatccataaatgttgtgtttacgaagattgattttgccatccaaa 50001117  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| |||||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  50001118 aagatctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 50001172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4419285 - 4419137
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||| | || ||||| |||||||    
T  4419285 agaggttgttgaccttctacatagagttcaaagggttatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttacgatgattggttttgcc 4419186  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| |||||  |||||||| ||||||||||| |||||||||| |||||||    
T  4419185 atccaaaaa-atctagcggcgcagcttgttgcccgcttgcctcctattca 4419137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 23255728 - 23255586
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| || |||| ||| ||||||| |||||| |||||||||| |||||||||| ||||||| | ||||||||||||||||||| | |    
T  23255728 gttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatattgtgtttacgaggattgattttgccatccaga 23255629  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    || ||||||||| |||||||||||||||||| ||| |||||||    
T  23255628 aaagtctagcggcgcagcttgttgtccgcttacctcctattca 23255586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 39001412 - 39001263
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| || |||| | | ||||||| ||||||  |||||||||||||||||||||||||||| | |||||||| ||||| |||| |||    
T  39001412 gttgaccttctacatagagtccaaaggattatgcataacaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaa 39001313  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    |||||||||||| |||| |||||| |||||||||| ||||||| ||||||    
T  39001312 aaggtctagcggcgcagtttgttgcccgcttgcctcctattcatgtgtaa 39001263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 26521504 - 26521350
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||| ||||||| |||||| ||||||||| | |||||||| ||||| |||| ||    
T  26521504 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtatcctaggcccatga-tgttgtgtttacgaggattggttttgtcatccaa 26521406  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||| ||||||  |||||| ||||||||||||||||||| || |||||| ||||    
T  26521405 aaaggtttagcggcacagctttttgtccgcttgccttctatccatgtgtaagtaat 26521350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 50464387 - 50464528
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||| ||| ||| ||| ||||||||||| ||||||||||||||| |  |  |||||||||||||| | ||||||| ||||||||||| ||    
T  50464387 tgttgaccttctacgtagagtttaaagggtcatgcataacaatgtcatgtctcccaaatatatgaatgttgtgtttacgaggatttattttgccatccaa 50464486  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    ||||  ||||||| ||||||||||||||||||||||||||||    
T  50464487 aaagacctagcggcgcagcttgttgtccgcttgccttctatt 50464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 55933550 - 55933694
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||||||||||||| || |||| ||| || |||| |||| | ||||||||||||||| ||||||||||||| | || |||||||||||||||| |    
T  55933550 ttgttgaccttctacatagagtccaaagggttatacataacaatattatgtctcctaggtccgtgaatgttgtgtttacgatgattgattttgccatcca 55933649  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||| ||||||||  |||| ||||||||||||||||| |||||||    
T  55933650 aaaaagtctagcgacgcagtttgttgtccgcttgcctcctattca 55933694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 53619601 - 53619447
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| ||  ||| ||| ||||||| |||||| ||||||| ||||||||||||||||||||| | ||| |||| |||||||||| |||    
T  53619601 gttgaccttctacatagagtctaaagggttatgcataacaatgttatgtctcttaggtccatgaatgttgtgtttacgagaattggttttgccatccaaa 53619502  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||| ||||||||||| |  ||| ||| ||||||| |||||| ||||    
T  53619501 aaggtctagcggcgcagcttgttgcctacttacctcctattcatgtgtaagtaat 53619447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 40392723 - 40392811
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataa 173  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  40392723 gaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaaataatggtttatataa 40392811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25504317 - 25504156
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||| |||||||||| || |||| ||| |||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  25504317 agagactgttgaccttttaaatagagtttaaaaggtcatgcatagtaatgtcatgtctcataggtccatgaatattgtgtttatgaggattgcttttgcc 25504218  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||  |||||||| |  ||   | |||||||||  | ||||||| ||| ||||||||||||||    
T  25504217 attcaaaaaggtttgacgacactgcttgttgtttggttgccttgtatacaagtgtaaataat 25504156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 23605059 - 23604951
Alignment:
Q  54 tgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagt 153  Q
    |||||||||| ||||||||| |||||||  ||||||||||||||| |||| ||||||||||||||| ||| ||||||||||| ||| |||||||||| ||    
T  23605059 tgtctcctagatccatgaatattgtgttgttgaggattgattttgtcatccaaaaaggtctagcggcgcaacttgttgtccggttgtcttctattcatgt 23604960  T
Q  154 gtaaataat 162  Q
    |||||||||    
T  23604959 gtaaataat 23604951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 132407 - 132244
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||||||||||| ||||||| || ||| ||| ||||| ||||| |||||||||||||  ||||| ||||| ||||||||| |  || || ||||||  |    
T  132407 agagattgttgacattctacacagagtttaaagggtcaagcataacaatgtcatgtcttttaggttcatgattgttgtgtttacaagaatcgattttatc 132308  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattg 164  Q
    |||||||||||| || ||||||||||||||  |||||||||||||||||| | |||| ||||||    
T  132307 atctaaaaaggtataacggtgcagcttgttccccgcttgccttctattcatgcgtaagtaattg 132244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 31847071 - 31846964
Alignment:
Q  55 gtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtg 154  Q
    |||||||||||||||||||||||||||   |||||||  || ||||||| ||||||||||||||| |||| |||||| |||||||||| ||||||| |||    
T  31847071 gtctcctaggtccatgaatgttgtgttagcgaggattcgttatgccatccaaaaaggtctagcggcgcaggttgttgcccgcttgcctcctattcatgtg 31846972  T
Q  155 taaataat 162  Q
    ||| ||||    
T  31846971 taagtaat 31846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42455692 - 42455841
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||| ||||||||||||| ||||||| | ||||| ||| ||||||||||| | ||||||||||||||||||| || | ||| ||||| |||| |    
T  42455692 agaggttgttaaccttctacatagagttcaaatgatcatggataacaatgtcatgttttctaggtccatgaatgttgtttttacgagaattgactttgtc 42455791  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||  |||||||| |||| |  || |||||||  |||||||||||||||||    
T  42455792 attcaaaaaggtttagcagcacaacttgttgctcgcttgccttctattca 42455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 56462191 - 56462291
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||  ||||||||||||||||| |||||| ||||||||||| | ||| |||| |||||||    
T  56462191 agaggttgttgaccttctacatagagttcaaaggatcatgcatgacaatgtcatgtctcctaagtccataaatgttgtgtttacgagaattggttttgcc 56462290  T
Q  101 a 101  Q
    |    
T  56462291 a 56462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 48657012 - 48657147
Alignment:
Q  13 ccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggt 112  Q
    |||||||||||| || |||| | | |||||||||||||| ||||||| |||||| |||||||||||||| | || ||||||||||||| || |||||| |    
T  48657012 ccttctacatagagtccaaatgattatgcatagcaatgttatgtctcataggtctatgaatgttgtgtttacgatgattgattttgccgtccaaaaagat 48657111  T
Q  113 ctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||| ||||  |||||||| | ||||| || |||||||    
T  48657112 ctagtggtg--gcttgttgcctgcttggctcctattca 48657147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7536656 - 7536805
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| | || ||||||||||| | ||||||| ||| |||||||||||| |||| |  | ||||| |||||      
T  7536656 agaggttgttgaccttctacatagagttcaaatgatcgtgcatagcaattttatgtctcgtagatccatgaatgttatgtttacaatgattggttttgtg 7536755  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| |||||| |||||| ||||| |||||||  |||||| | ||||||||    
T  7536756 atccaaaaagatctagcagtgcaacttgttgctcgcttgtcatctattca 7536805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 47585153 - 47585270
Alignment:
Q  61 taggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaata 160  Q
    |||||| || ||| ||||||| | || ||||| ||||| ||||||||||||| |||||| | || |||||||| | ||||||||||||||| ||||||||    
T  47585153 taggtctataaattttgtgtttacgaagattggttttgtcatctaaaaaggtttagcggcgtagtttgttgtctgtttgccttctattcaaatgtaaata 47585252  T
Q  161 attgtgtatataatttat 178  Q
    || || ||||||||||||    
T  47585253 atagtttatataatttat 47585270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 50442609 - 50442712
Alignment:
Q  46 caatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttct 145  Q
    |||||| ||||||||||||| |||| |||||||||| | |||||||| |||||||||| |||||||  ||| || ||||||||||| ||||||| ||||     
T  50442609 caatgttatgtctcctaggttcatggatgttgtgtttaagaggattggttttgccatccaaaaagggttagtggcgcagcttgttgcccgcttgtcttcc 50442708  T
Q  146 attc 149  Q
    ||||    
T  50442709 attc 50442712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38535654 - 38535744
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggatt 91  Q
    |||| ||||| ||| ||||||||| |||||||  ||||||||||||||||||||||||  |||||||||| |||||||||| | |||||||    
T  38535654 agaggttgttcaccctctacatagagttcaaagagtcatgcatagcaatgtcatgtcttataggtccatggatgttgtgtttacgaggatt 38535744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 50463031 - 50463170
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||| |||||||||||||| ||| ||| ||| || |||||||| ||||| ||||||||| | ||  ||||   ||||||| | |||||||  |||||||    
T  50463031 agagactgttgaccttctacgtagagtttaaagggccatgcataacaatgccatgtctcccaagtatatga---ttgtgtttacgaggatttgttttgcc 50463127  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgcctt 143  Q
    ||| ||||||  ||||||| |||||||| ||||||||||||||    
T  50463128 atccaaaaagacctagcggcgcagcttgctgtccgcttgcctt 50463170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 8738202 - 8738071
Alignment:
Q  26 gttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagc 125  Q
    ||||||| | |||||||||  ||||||||||||| ||||| ||||||||||||||  |  | ||||||||||| |||| ||||| || |||||| ||||     
T  8738202 gttcaaaggctcatgcataaaaatgtcatgtctcttaggttcatgaatgttgtgtatacaaagattgattttgtcatccaaaaaagtttagcggcgcagt 8738103  T
Q  126 ttgttgtccgcttgccttctattcaagtgtaa 157  Q
    ||||| ||||||| ||||  ||||| ||||||    
T  8738102 ttgttatccgcttacctttcattcatgtgtaa 8738071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 23233211 - 23233340
Alignment:
Q  12 accttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaagg 111  Q
    ||||||||| ||| ||||||  |||||||||||  |||||||||| |||||| | |||||||||||| || |||||||||||||| || ||| |||||||    
T  23233211 accttctacgtagagttcaag-ggtcatgcataataatgtcatgtttcctagattcatgaatgttgtctttatgaggattgatttggctatccaaaaagg 23233309  T
Q  112 tctagcggtgcagcttgttgtccgcttgcctt 143  Q
      |||| |  |||||||||| |||||||||||    
T  23233310 cttagcagcacagcttgttg-ccgcttgcctt 23233340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 6865910 - 6865984
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    ||||| ||||| ||||||| ||||||| ||| |||||||||||||||||||||||||| | |||||||||| ||||    
T  6865910 ttgttaaccttttacatagagttcaaagggtaatgcatagcaatgtcatgtctcctagat-catgaatgttctgtt 6865984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 45661699 - 45661568
Alignment:
Q  15 ttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtct 114  Q
    |||||||||  ||||||| |||||| || | |||||||||  ||| ||||||||||||| ||||||| | |||||||| |||| | ||| ||||||  ||    
T  45661699 ttctacataaagttcaaagggtcatacacaacaatgtcataactcgtaggtccatgaatattgtgtttacgaggattggttttactatccaaaaagacct 45661600  T
Q  115 agcggtgcagcttgttgtccgcttgccttcta 146  Q
    | |||| ||| ||||||  |||||||||||||    
T  45661599 aacggtacagtttgttgcacgcttgccttcta 45661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 9601222 - 9601084
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||||||||||||  ||| ||| |||| |||| |    ||||||| ||||||||| ||| | || |||||| | |||||||||||||| |||| |    
T  9601222 ttgttgaccttctacataaagtttaaagggtcgtgcaca----tgtcatgactcctaggttcataagtggtgtgtttacgaggattgattttgtcatcca 9601127  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattc 149  Q
    ||||| | || ||| ||| ||||||||||||||| |||||||||    
T  9601126 aaaagct-taacggcgcaacttgttgtccgcttgtcttctattc 9601084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 12053415 - 12053333
Alignment:
Q  75 ttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    ||||||| | ||| |||| |||||||||| ||||||| | ||||  ||||||||||||| |||||||||||||||| ||||||    
T  12053415 ttgtgtttacgagaattggttttgccatcgaaaaaggccgagcgacgcagcttgttgtctgcttgccttctattcatgtgtaa 12053333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 18981651 - 18981735
Alignment:
Q  28 tcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtct 114  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||||||| | || |||||  ||||||||| |||| |||||    
T  18981651 tcaaagggtcatgcatagtaatgtcatgtct-ctaggtccatgaatgttgtgtttacgatgattg-gtttgccatccaaaatggtct 18981735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 32312803 - 32312957
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtg-----ttcatgaggattgattttgccat 102  Q
    ||||| ||| |||| || ||||||||||||||||||| ||||||  ||||| |||| || ||||||||||||     |||| |||||||| |||||||||    
T  32312803 gttgatcttatacaaagagttcaaaaggtcatgcataacaatgtagtgtcttctagatctatgaatgttgtgttgttttcaggaggattggttttgccat 32312902  T
Q  103 ctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
     |||||||   |||||| | | ||||||| ||| |||||||| || || ||||||    
T  32312903 ttaaaaagaattagcggcgtatcttgttgcccgtttgccttccatccatgtgtaa 32312957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46391399 - 46391474
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 78  Q
    |||| ||||||||||||||||||  ||||||||| ||||||  | |||||||||||||||||  ||||||||||||||    
T  46391399 agaggttgttgaccttctacataaagttcaaaagatcatgc--aacaatgtcatgtctcctaaatccatgaatgttgt 46391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 23242889 - 23242780
Alignment:
Q  34 ggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtc 133  Q
    ||||||||||| ||||||||| |||| ||||||||| ||| ||||||| | || |||||||||||  ||| |||||| |||| |||  || ||| ||||     
T  23242889 ggtcatgcataacaatgtcatttctcttaggtccataaatattgtgtttacgatgattgattttgttatccaaaaagctctaacggcacaacttattgtt 23242790  T
Q  134 cgcttgcctt 143  Q
    ||||||||||    
T  23242789 cgcttgcctt 23242780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 34213636 - 34213540
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatc 103  Q
    |||||||||||||| |||| ||||||| |||||||| || ||||||  | |||||||| ||||||||||||||||| |  ||||| | ||||||||||    
T  34213636 ttgttgaccttctagatagagttcaaagggtcatgcctaacaatgt-gtctctcctagttccatgaatgttgtgtttacaaggatcggttttgccatc 34213540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 54927418 - 54927354
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattc 149  Q
    ||||||||||||||||||||| |||||  |||||| |||||||||||  |||||| |||||||||    
T  54927418 gaggattgattttgccatctagaaagggttagcggcgcagcttgttgcacgcttgtcttctattc 54927354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 28739922 - 28739847
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 81  Q
    ||||||||||| ||||||| ||||||   |  ||||||| |||||| ||||||||||||||||| |||||||||||    
T  28739922 ttgttgaccttttacatagagttcaacgtgcaatgcataacaatgttatgtctcctaggtccataaatgttgtgtt 28739847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 54190936 - 54191050
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||||||||| |||||| ||||||| || |||||||| |||||||||| ||| || |||||| ||| |||| || |  | ||||| ||||||     
T  54190936 agaggttgttgaccttccacatagagttcaaagggccatgcataacaatgtcatgactcttaagtccataaatattgtatttacaaagattggttttgct 54191035  T
Q  101 atctaaaaaggtcta 115  Q
    ||| |||||| ||||    
T  54191036 atccaaaaagttcta 54191050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 747854 - 747898
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatag 45  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  747854 agaggttgttgaccttctacatagagtttaaaaggtcatgcatag 747898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 3698685 - 3698733
Alignment:
Q  61 taggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaa 109  Q
    ||||| |||||| |||||||| |||| ||||||||||||||||||||||    
T  3698685 taggttcatgaacgttgtgtttatgaagattgattttgccatctaaaaa 3698733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 22449812 - 22449879
Alignment:
Q  42 atagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaag 110  Q
    ||||||||||||| |||  ||| ||||||||||||||||| | || ||||||||||| |||||||||||    
T  22449812 atagcaatgtcatatcttatagatccatgaatgttgtgtttacga-gattgattttgtcatctaaaaag 22449879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 46440983 - 46441083
Alignment:
Q  10 tgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaa 109  Q
    ||||||||||||||| || |||| |||  ||||||||||||  ||||||| ||||| ||||||  || | || | || ||||||||||| ||||||||||    
T  46440983 tgaccttctacatagagtccaaagggttgtgcatagcaatgctatgtctcataggttcatgaaaattatatttacgatgattgattttgtcatctaaaaa 46441082  T
Q  110 g 110  Q
    |    
T  46441083 g 46441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 49344232 - 49344337
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatg----aatgttgtgttcatgaggattgattttgccatct 104  Q
    ||||||| |||||||  ||| ||| |||||  ||||| ||||| ||||||||||| ||||||    ||||||||||| |||| ||||||||||| | |||    
T  49344232 ttgacctcctacatatagtttaaagggtcactcatagaaatgtaatgtctcctagatccatgaattaatgttgtgtttatgatgattgattttgtcgtct 49344331  T
Q  105 aaaaag 110  Q
    ||||||    
T  49344332 aaaaag 49344337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 16009347 - 16009242
Alignment:
Q  41 catagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgc 140  Q
    ||||||||||| |||||  || |||| |||||||| ||||| | || ||||| |||||| ||  |||||||| |||||| ||||||||||| | ||||||    
T  16009347 catagcaatgttatgtccgctcggtctatgaatgt-gtgtttaagatgattggttttgcgataaaaaaaggt-tagcggcgcagcttgttgcctgcttgc 16009250  T
Q  141 cttctatt 148  Q
    ||||||||    
T  16009249 cttctatt 16009242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 27471045 - 27470994
Alignment:
Q  111 gtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||| ||||||||||| | | ||||||||| ||||||||||||||||    
T  27471045 gtctagcggcgcagcttgttgcctgattgccttctgttcaagtgtaaataat 27470994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 50483281 - 50483320
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatg 40  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  50483281 agaggttgttgaccttctacatagagttcaaaaggtcatg 50483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 712678 - 712722
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatag 45  Q
    |||| |||||| |||||||||||| ||| ||||||||||||||||    
T  712678 agaggttgttgtccttctacatagagtttaaaaggtcatgcatag 712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 1041386 - 1041286
Alignment:
Q  62 aggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttg-ccttctattcaagtgtaaata 160  Q
    |||| |||||||||||||||   || |||||||||| ||||| |||||   ||| ||| | ||||| ||||||||||| |||||||||| || |||||||    
T  1041386 aggttcatgaatgttgtgttttcgatgattgattttaccatccaaaaaaacctaacggcgtagcttattgtccgcttgcccttctattcgagagtaaata 1041287  T
Q  161 a 161  Q
    |    
T  1041286 a 1041286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 30924995 - 30925079
Alignment:
Q  3 agattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgag 87  Q
    |||||||||||||| ||||||| ||||||| | |  ||||||  ||| |||||| || ||||||||| |||||| |||| |||||    
T  30924995 agattgttgaccttttacatagcgttcaaaggattttgcataaaaatatcatgtttcttaggtccataaatgttatgtttatgag 30925079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 49354160 - 49354265
Alignment:
Q  10 tgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatg----aatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||| |||||  || ||| |||||| ||||||||||| ||||||||||  ||||||    ||||||||||| | || ||||||||||| | || |    
T  49354160 tgaccttctgcatagaatttaaatggtcattcatagcaatgtaatgtctcctaaatccatgaattaatgttgtgtttacgatgattgattttgtcgtcca 49354259  T
Q  106 aaaagg 111  Q
    ||||||    
T  49354260 aaaagg 49354265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 50483315 - 50483395
Alignment:
Q  50 gtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgtt 130  Q
    |||||||| | |||||||||||||||||| |||| ||  ||||||||||  | ||||||||| ||| | | ||||||||||    
T  50483315 gtcatgtcacataggtccatgaatgttgtattcacgataattgattttgtaacctaaaaaggcctaacagcgcagcttgtt 50483395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 53098443 - 53098347
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgatttt 97  Q
    |||| ||||| ||||||||||||| ||||||| ||||||||  | ||||||| || ||  || ||||| ||||  |||||| | |||||||||||||    
T  53098443 agaggttgttaaccttctacatagagttcaaatggtcatgcccatcaatgtcgtgacttttatgtccaagaatactgtgtttacgaggattgatttt 53098347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 22589438 - 22589592
Alignment:
Q  18 tacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagc 117  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  22589438 tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcataggtctatgaatgttgtgttcacgaggattggttttgccatccaaaaaggtctagc 22589537  T
Q  118 ggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    || ||||||||||| ||||||||||| |||||||||||||||||| || ||||||    
T  22589538 ggcgcagcttgttgcccgcttgccttttattcaagtgtaaataatggtttatata 22589592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 38815310 - 38815160
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| ||||| ||    
T  38815310 tgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttttccatccaa 38815211  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    |||||  |||||| ||||||||||| |||||||||||||||||| ||||||    
T  38815210 aaaggcttagcggcgcagcttgttgcccgcttgccttctattcatgtgtaa 38815160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 18804628 - 18804461
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||| || || |||| |||| | |||||||| |||||||||| ||    
T  18804628 tgttgaccttctacatagatttcaaaaggtcatgcataacaatgtcatgactcctaggttca-gagtgttttgtttacgaggattggttttgccatccaa 18804530  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatataatt 175  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| || |||||||||    
T  18804529 aaaggtctagcggcgcagcttgttgcctgcttgccttctattcaagtgtaaataatggtttatataatt 18804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 37514237 - 37514101
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| | ||||| |||||||||||||||||| |||| |||||||||| |||||| | ||    
T  37514237 tgttgaccttctacatagagttcaaaaggtcatgcatatcaatgttacgtctcttaggtccatgaatgttgtattcacgaggattgatcttgccacccaa 37514138  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgcctt 143  Q
    ||||||||| ||| ||||||||||| |||||||||||    
T  37514137 aaaggtctaacggcgcagcttgttgcccgcttgcctt 37514101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 24125050 - 24124880
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||||  |||||||    
T  24125050 agaggttgttggccttctacataaagttcaaaaggtcatgcatagcaatgtcatgtctcataggtccatgaatgttgtgtttacaaggattagttttgcc 24124951  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatat 171  Q
    |||   ||| |  | |||| ||||||| ||  |||||||||||||||||||||||||||||| || |||||    
T  24124950 atccgtaaaagcttggcggcgcagcttttttgccgcttgccttctattcaagtgtaaataatggtttatat 24124880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3187991 - 3187866
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||| ||||||||||||| || |||| ||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| |||| |||||||    
T  3187991 agaggttgttaaccttctacatagagt-caaagggttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgcc 3187893  T
Q  101 atctaaaaaggtctagcggtgcagctt 127  Q
    ||| ||||||||||| |||||||||||    
T  3187892 atccaaaaaggtctaacggtgcagctt 3187866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 39434681 - 39434559
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    |||| ||||||||||| || |||| ||| ||||||| |||||| ||||||| ||| ||||||||||||||||| | ||||||||||||||||||| ||||    
T  39434681 ttgatcttctacatagagtccaaagggttatgcatatcaatgtaatgtctcttagatccatgaatgttgtgtttacgaggattgattttgccatccaaaa 39434582  T
Q  109 aggtctagcggtgcagcttgttg 131  Q
    ||||||||||| |||||||||||    
T  39434581 aggtctagcggcgcagcttgttg 39434559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 24451105 - 24450972
Alignment:
Q  38 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgct 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||  ||||  |||||||| ||||||| ||||||| |    
T  24451105 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacgatgattg-ttttgccatc-caaaatatctagcggcgcagcttattgtccgtt 24451008  T
Q  138 tgccttctattcaagtgtaaataattgtgtatataa 173  Q
    |  ||||||||||| |||||||||| || |||||||    
T  24451007 ttgcttctattcaattgtaaataatggtttatataa 24450972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 18596759 - 18596855
Alignment:
Q  76 tgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||||| |||||||| ||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  18596759 tgtgttcacgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtcagcttgccttctattcaagtgtaaataatggtttatata 18596855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3821246 - 3821138
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||| |||||| |||| | |||||||||| ||||     
T  3821246 agaggttgttgaccttctacatagagttcaaagggtaatgcatagcaatgtcatgtctcctaggttcataaatgttatgtttacgaggattgatattgca 3821147  T
Q  101 atctaaaaa 109  Q
    || ||||||    
T  3821146 atttaaaaa 3821138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 40223493 - 40223645
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||| | | | || |||    ||||||||||||||| ||||  |||||||||| |    
T  40223493 ttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatattttcgagatcc----atgttgtgttcatgatgattagttttgccatcaa 40223588  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||| |||||  || ||||||| ||||| | ||| ||||||||||| ||||||||||    
T  40223589 aaaatgtctaatggcgcagcttattgtctgtttgtcttctattcaaatgtaaataat 40223645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6592597 - 6592480
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||| | ||| |||| ||||| |    
T  6592597 agaggttgttgaccttctgcatagagttcaaaaggtcatgcatat-aatgtcatgtctcataggttcatgaatgttgtgtttacgagtattggttttgtc 6592499  T
Q  101 atctaaaaaggtctagcgg 119  Q
    ||| | |||||||||||||    
T  6592498 atccagaaaggtctagcgg 6592480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 6618306 - 6618178
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||||||||||||||| | ||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| | ||| |||| ||||| |    
T  6618306 agagattgttgaccttttgcatagcgttcaaaaggtcatgcatat-aatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtc 6618208  T
Q  101 atctaaaaaggtctagcggtgcagcttgtt 130  Q
    ||| |||||| |||| |||  |||||||||    
T  6618207 atccaaaaagatctaacggcacagcttgtt 6618178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 162
Target Start/End: Complemental strand, 42659212 - 42659088
Alignment:
Q  38 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgct 137  Q
    |||||||||||| | |||||| |||||| ||||||||||||||| | ||||||| |||||| |||| ||||||||||| ||||  | |||||||||||||    
T  42659212 atgcatagcaatattatgtcttctaggttcatgaatgttgtgtttacgaggattaattttgtcatccaaaaaggtctaacggtataacttgttgtccgct 42659113  T
Q  138 tgccttctattcaagtgtaaataat 162  Q
    ||||| ||||||  |||||| ||||    
T  42659112 tgcctcctattcttgtgtaagtaat 42659088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 8882320 - 8882236
Alignment:
Q  47 aatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttg 131  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||| || || ||| |||||||||||    
T  8882320 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattaattttgccatcaaaaaatgtttaacggcgcagcttgttg 8882236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 5329687 - 5329797
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||||||||||||||||| ||| | ||||||| ||||||| | | |||| |||||||||||| ||| || ||||||||||| ||||||||| |||||| |    
T  5329687 agagattgttgaccttctgcattgagttcaaagggtcatggacaacaatatcatgtctcctatgtctatcaatgttgtgtttatgaggattaattttgac 5329786  T
Q  101 atctaaaaagg 111  Q
    ||| |||||||    
T  5329787 atccaaaaagg 5329797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 173
Target Start/End: Complemental strand, 500201 - 500092
Alignment:
Q  64 gtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    |||||||||||||||||| | ||||||||||||| ||||  |||||||  |  |||  |||||| ||| ||||||||||||||||||||||||||||||     
T  500201 gtccatgaatgttgtgtttacgaggattgattttaccattcaaaaaggcttgacggcacagcttattgcccgcttgccttctattcaagtgtaaataatg 500102  T
Q  164 gtgtatataa 173  Q
    || |||||||    
T  500101 gtttatataa 500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 4699886 - 4699763
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    ||||||||||||| |||  ||||||| ||||||| |||||||| | ||||| ||||||||||||||||||||||| |  ||||||  |||||||||| ||    
T  4699886 tgttgaccttctatataaagttcaaa-ggtcatgaatagcaatattatgtcacctaggtccatgaatgttgtgtttacaaggattagttttgccatccaa 4699788  T
Q  107 aaaggtctagcggtgcagcttgttg 131  Q
    |||||  ||| || |||||||||||    
T  4699787 aaaggcttagtggcgcagcttgttg 4699763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9259377 - 9259485
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||| |   ||||||||||||||||||| | ||||| ||||||||||||||| || | || ||||||||||| |    
T  9259377 agaggttgttgaccttctacatagagttcacagactcatgcatagcaatgtcatatatcctaagtccatgaatgttgtatttacgaagattgattttgtc 9259476  T
Q  101 atctaaaaa 109  Q
    ||| |||||    
T  9259477 atccaaaaa 9259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35740071 - 35740135
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggt 65  Q
    |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||    
T  35740071 agagattgttgaccttctacatagagttcaaaaagtcatgcataacaatgtcatgtcccctaggt 35740135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 43824003 - 43823864
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    ||||||||  |||||| ||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||| | |   ||||  |||| |||||||||    
T  43824003 ttgacctttcacatagagttcaaatggtcatgcatagcaatgtcatgtctccgagatccattaatgttgtgtttacggcaattgggtttgtcatctaaaa 43823904  T
Q  109 aggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    ||| ||||  | ||| ||| ||| || |||||||||||||    
T  43823903 aggcctagttgcgcaactttttgccctcttgccttctatt 43823864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 121806 - 121903
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttg 98  Q
    ||||||||||||| ||||||| |  ||| ||||| ||||||||| ||||||||||||  ||| ||||||| |||||||||| | ||||||||||||||    
T  121806 agagattgttgacattctacacaaagtttaaaagatcatgcatatcaatgtcatgtcatctaagtccatggatgttgtgtttacgaggattgattttg 121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25021899 - 25022048
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||| || ||| |  ||||||| ||||||||| | ||||||||| ||||||||||||| |||||||||||| |  | ||||||||||  |    
T  25021899 agaggttgttgaccatccacacaaagttcaaagggtcatgcacaacaatgtcatatctcctaggtccaggaatgttgtgtttacaatgattgattttatc 25021998  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| |||||  |||||||  | ||||||||||  | ||||||||||||||    
T  25021999 atccaaaaaattctagcgacgtagcttgttgtttgtttgccttctattca 25022048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 1187397 - 1187448
Alignment:
Q  121 gcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  1187397 gcagcttgttgtctgcttgccttctattcaagtgtaaataattgtttatata 1187448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 24320293 - 24320198
Alignment:
Q  67 catgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||||||||| | ||||||||||||||  ||| ||||||||||||| ||||||||||||| | | ||| |||||||||  |||||| ||||    
T  24320293 catgaatgttgtgtttacgaggattgattttgatatccaaaaaggtctagcagtgcagcttgttgcctgtttgtcttctattcgtgtgtaattaat 24320198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8115834 - 8115738
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgatttt 97  Q
    |||| ||||||||||||||||||  ||||||| | |||||||| |||||||||||| |   | ||||||||||||| |||| |||| ||||||||||    
T  8115834 agaggttgttgaccttctacataaagttcaaaggatcatgcattgcaatgtcatgtttataaagtccatgaatgttatgtttatgatgattgatttt 8115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 28196209 - 28196105
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||| ||||| ||| ||||||| | ||||||| | |||||||||||||||||| |||| | |||||||||| | | | |||||||||| |||| |    
T  28196209 ttgttgaccatctacgtagagttcaaaggatcatgcacaacaatgtcatgtctcctagatccacggatgttgtgtttacgggaattgattttgtcatcca 28196110  T
Q  106 aaaag 110  Q
    |||||    
T  28196109 aaaag 28196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 4066829 - 4066758
Alignment:
Q  39 tgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaag 110  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||| || ||||| |||| ||||| ||||||    
T  4066829 tgcatagcaatgtaatgtgtcctaggtccatgactgttgtgttcacgatgattggttttaccatccaaaaag 4066758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4073556 - 4073460
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgatttt 97  Q
    |||| |||||||||||||||| ||   ||||   |||||||||||||||||||||| ||| || ||| ||||||||||||| | ||| |||||||||    
T  4073556 agaggttgttgaccttctacagagaaatcaatgagtcatgcatagcaatgtcatgtttccaagatccgtgaatgttgtgtttacgagaattgatttt 4073460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 3863331 - 3863243
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaa---tgttgtgttcatgaggattgat 94  Q
    |||||||||||||||| ||||||| |||  |||||||||||||||| | ||||| ||| |||||   ||||||||| | ||||||||||    
T  3863331 ttgaccttctacatagagttcaaagggtagtgcatagcaatgtcatctttcctaagtctatgaatattgttgtgtttacgaggattgat 3863243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 500244 - 500199
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtc 52  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||    
T  500244 tgttggccttctacatagagttcaaaaggtcatgcatatcaatgtc 500199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 3825652 - 3825528
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    |||||||||||||||| ||  ||||||  || ||||||||||| ||||||| || ||| ||||||||| ||||||| | || |||| || ||||||| ||    
T  3825652 ttgttgaccttctacacagaattcaaagagtaatgcatagcaacgtcatgtttcatagatccatgaatattgtgtttacgatgattaatattgccat-ta 3825554  T
Q  106 aaaaggtctagcggtgcagcttgttg 131  Q
    ||||   ||||||| ||| |||||||    
T  3825553 aaaaaacctagcggcgcaacttgttg 3825528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39671257 - 39671332
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgtt 76  Q
    |||| ||||| ||||| ||| ||| ||| ||| ||||||| |||  ||||||||||||||||| ||||||||||||    
T  39671257 agaggttgttaaccttttacgtagagttaaaagggtcatgaataaaaatgtcatgtctcctagatccatgaatgtt 39671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 8714721 - 8714797
Alignment:
Q  34 ggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaagg 111  Q
    ||||||||||| |||||| ||| ||| ||| || |||||||||||||| | ||  ||||||||| |||||||||||||    
T  8714721 ggtcatgcatatcaatgttatggctcatagatc-atgaatgttgtgtttaagaaaattgattttaccatctaaaaagg 8714797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 36004092 - 36004048
Alignment:
Q  53 atgtctcctaggtccatgaatgttgtgttcatgaggattgatttt 97  Q
    ||||||| |||||||||||||||| | |||| |||||||||||||    
T  36004092 atgtctcataggtccatgaatgttatcttcaagaggattgatttt 36004048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 103122 - 102957
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||| | | ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | |||||||| |||||||||| ||    
T  103122 tgttgaccttctacatcgagctcaaaaggtcatgcataacaatgtcgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaa 103023  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| || ||||||    
T  103022 aaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaaataatggtttatata 102957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 33272 - 33101
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| || ||||| | |||||||||||||| |    
T  33272 agaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaattttatgtctcctaggtccatgaacgtcgtgtttacgaggattgattttgtc 33173  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||| |||||||  | |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  33172 atccaaaaaggcttggcggtgcagcttgttgcctgcttgccttctattcaagtgtaaataatggtgtatata 33101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 32115734 - 32115581
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||||    
T  32115734 tgttgaccttctacaaagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgctatctaa 32115635  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaata 160  Q
    ||||||||||||||| | ||||||||  | ||| ||||||||||||| ||||||    
T  32115634 aaaggtctagcggtggaacttgttgtttgtttgtcttctattcaagtataaata 32115581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 17249397 - 17249539
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| || |||| | | ||| |||||||||| |||||||||| || ||||||||||||||| | |||||||| |||||||||| |||    
T  17249397 gttgaccttctacatagagtccaaaggattatgtatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatccaaa 17249496  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||||||||||| ||||||||||| |||||||||| |||||||    
T  17249497 aaggtctagcggcgcagcttgttgcccgcttgcctcctattca 17249539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 3137365 - 3137488
Alignment:
Q  34 ggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtc 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||  |||| ||||| ||||||| |    
T  3137365 ggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaaggcttagcagtgcaacttgttgcc 3137464  T
Q  134 cgcttgccttctattcaagtgtaa 157  Q
    || |||||||| ||||| ||||||    
T  3137465 cgtttgccttccattcatgtgtaa 3137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 29338164 - 29338313
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||||| |||||||||||||||| |||||||| ||||||||| | |||||||||| ||||||||||||||||||||||||| |  |||||||||||| |     
T  29338164 agagatcgttgaccttctacatatggttcaaagggtcatgcacatcaatgtcatgactcctaggtccatgaatgttgtgtttacaaggattgatttttct 29338263  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||| |||| || ||||| ||||||||||||| || |||| ||| ||||||    
T  29338264 atccaaaatggcctagcagtgcagcttgttgcccacttgtcttttattca 29338313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 33220801 - 33220957
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||||||||||||  || |||| ||| ||||||||||||||  ||||| |||||||||||||||||| ||| | ||  |||| ||||||||||      
T  33220801 ttgttgaccttctacatatagtccaaagggttatgcatagcaatgttgtgtcttctaggtccatgaatgttgcgtttacgataattggttttgccatcct 33220900  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  33220901 aaaaggtctagcggcgcagcttgttggccgcttgcctcctattcatgtgtaagtaat 33220957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 959602 - 959432
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||| || | |||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||| |    
T  959602 agaggttgttgaccttctacgtaag-ttcaaaaggtcatgcatagcaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattgattttgtc 959504  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||||| ||| | |  || ||| ||   ||||||| |||||||||| | |||||||| || ||||||    
T  959503 atctaaaaaggcctaacagcacaacttatttctcgcttgctttctattcaaatataaataatggtttatata 959432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28625952 - 28625792
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||| || |||||| |||| |||||| |||||||||||||| | |  |||||||||||||    
T  28625952 agaggttgttgagcttctacataaagttcaaaaggtcatgcataaca-tgtcatatctcataggtctatgaatgttgtgtttacggagattgattttgcc 28625854  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||  |||||| |||||||| ||||||| ||  ||| |||||||||||| |||||||||||||    
T  28625853 attcaaaaagatctagcggcgcagcttattacccgtttgccttctatttaagtgtaaataat 28625792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 7749441 - 7749342
Alignment:
Q  63 ggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||||||||||||| | |||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||    
T  7749441 ggtccatgaatgttgtgtttacgaggattggttttgccatcctaaaaggtctagcggtgcagcttgttgcccgcttgcctcctattcatgtgtaactaat 7749342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4206681 - 4206788
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||| |||||||| |||||| | ||||| | |||||||| |||||||    
T  4206681 agaggttgttgaccttctacatagagttcaaaaggtcatgcatgacaatgtcatgtcacctaggtcaatgaatatagtgtttacgaggattggttttgcc 4206780  T
Q  101 atctaaaa 108  Q
    ||| ||||    
T  4206781 atccaaaa 4206788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 357801 - 357950
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||| ||||||||||||||| || |||| | | | |||||||||||| || |||||||||||||||||||||||||| | || |||| ||||||||    
T  357801 agaggttgatgaccttctacatagagtccaaatgattaagcatagcaatgttatctctcctaggtccatgaatgttgtgtttacgaagattaattttgcc 357900  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    ||||||||| || ||||||   ||||||||||| | ||| || |||||||    
T  357901 atctaaaaatgtatagcggcatagcttgttgtcggtttgtctcctattca 357950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 34168897 - 34168782
Alignment:
Q  46 caatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttct 145  Q
    |||||||||| ||||||| ||||||||||||||||| | |||||||| |||||| ||| ||||||| ||||||| ||| ||||| | |||||||||||||    
T  34168897 caatgtcatgactcctagatccatgaatgttgtgtt-acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttct 34168799  T
Q  146 attcaagtgtaaataat 162  Q
    ||||| |||||| ||||    
T  34168798 attcatgtgtaattaat 34168782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 34304512 - 34304400
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| || ||||  || |||||||||||| ||||||||| |||||| ||||||||||| || | ||||||||||||||| ||| ||    
T  34304512 tgttgaccttctacatagagtccaaagagttatgcatagcaatatcatgtctcataggtctatgaatgttgtatttacgaggattgattttgcaatccaa 34304413  T
Q  107 aaaggtctagcgg 119  Q
    |||||| ||||||    
T  34304412 aaaggtatagcgg 34304400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 28009077 - 28009228
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    |||||||||||||  |||  ||||||| |||||| || | |||||||||| |||||||||||||||| ||||| || |  || ||||||||||| ||| |    
T  28009077 ttgttgaccttctgtatatagttcaaagggtcatacacaacaatgtcatgactcctaggtccatgaacgttgtctttaccagaattgattttgcaatcca 28009176  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 157  Q
    |||||| ||| ||  ||||||| ||||||| |||||||||||||| ||||||    
T  28009177 aaaaggcctaacgacgcagcttattgtccgtttgccttctattcatgtgtaa 28009228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 28543391 - 28543257
Alignment:
Q  29 caaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttg 128  Q
    |||||||||||| | | |||||| |||| |||||||||||| ||| || |||| | |||||||| ||||||||||| ||||| |||||||| ||| ||      
T  28543391 caaaaggtcatgtaaaacaatgttatgtttcctaggtccataaatattatgtttaagaggattggttttgccatctgaaaagatctagcggcgcaactaa 28543292  T
Q  129 ttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    |||||||||||||||||||||| | |||| |||||    
T  28543291 ttgtccgcttgccttctattcatgcgtaagtaatt 28543257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4166007 - 4166114
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||  |||||||||||| |||||||| || ||| | ||||| | |||||||| |||||||    
T  4166007 agaggttgttgaccttctacatagagtttaaaaggtcatgcatgacaatgtcatgtcacctaggtcaataaatatagtgtttacgaggattggttttgcc 4166106  T
Q  101 atctaaaa 108  Q
    ||| ||||    
T  4166107 atccaaaa 4166114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 34554370 - 34554476
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    ||||| |||||||||| ||| ||||||||||| |||||||| ||||||||| || || ||||||| ||||||| | |||||||||||||| |||| ||||    
T  34554370 ttgactttctacatagagtttaaaaggtcatgtatagcaatatcatgtctcgtaagt-catgaattttgtgtttacgaggattgattttgtcatccaaaa 34554468  T
Q  109 aggtctag 116  Q
    ||| ||||    
T  34554469 aggcctag 34554476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 45768 - 45819
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtct 58  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  45768 tgttgaccttctacatagagttcaaaaggtcatgcatagcaatgttatgtct 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 45816 - 45877
Alignment:
Q  111 gtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||||||||||| || ||||||    
T  45816 gtctagcggcgcagcttgttgcccgcttgcctcctattcaagtgtaaataatggtttatata 45877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 34562361 - 34562433
Alignment:
Q  100 catctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    ||||||| ||||||||  || |||| |||||||||| |||||||||||||||||||||||||| || ||||||    
T  34562361 catctaacaaggtctaatggcgcagtttgttgtccgtttgccttctattcaagtgtaaataatagtttatata 34562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 749501 - 749571
Alignment:
Q  89 attgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaat 159  Q
    ||||||||||||||| ||||| ||||  ||   ||||||||||||||||||||||||||||||||| ||||    
T  749501 attgattttgccatccaaaaacgtctgacgacacagcttgttgtccgcttgccttctattcaagtgaaaat 749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 13398272 - 13398376
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    |||||||| |||||||||| ||||||||| | ||||||| |||||||| | || |||| | ||| ||||||||||| | || | ||||||||| |||| |    
T  13398272 ttgttgacattctacatagagttcaaaagatgatgcataacaatgtcacgacttctagatgcataaatgttgtgtttacgatggttgattttgtcatcca 13398371  T
Q  106 aaaag 110  Q
    |||||    
T  13398372 aaaag 13398376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 34415451 - 34415404
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatg 55  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  34415451 gttgaccttctatatagagttcaaatggtcatgcatagcaatgtcatg 34415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 2134994 - 2135050
Alignment:
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||| ||||||||| ||||||||||  | ||||||||||||||||| ||||||||||    
T  2134994 aaaaagtctagcggcgcagcttgttacctgcttgccttctattcaattgtaaataat 2135050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 948019 - 947962
Alignment:
Q  105 aaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||| ||||||| ||||||||| | ||||||||||| |||||| |||||| ||||    
T  948019 aaaaaggcctagcggcgcagcttgtagaccgcttgccttatattcatgtgtaattaat 947962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 3714931 - 3714838
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccat 102  Q
    |||| ||||||||||| ||| |||   ||||||| | |||||||||||||| ||  |||||||||||||||||    |||||||||||| ||||    
T  3714931 ttgatcttctacatagagtttaaagaatcatgcacaacaatgtcatgtctcataaatccatgaatgttgtgtttgcaaggattgattttaccat 3714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 10663025 - 10662948
Alignment:
Q  67 catgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttc 144  Q
    ||||||||||||||| |||| |||  |||||  |||||||||| || |||||||||  |||||||| | |||||||||    
T  10663025 catgaatgttgtgtttatgatgatcaattttatcatctaaaaacgtttagcggtgctacttgttgttcacttgccttc 10662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 32269882 - 32270042
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||    
T  32269882 agaggttgttgaccttctgcatgaagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttcgcc 32269981  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| ||||| |  |||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  32269982 atccaaaaaagcatagcgg-gcagcttgttacccgcttgccttctattcaagtgtaaataat 32270042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 2566194 - 2566341
Alignment:
Q  15 ttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtct 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||| ||||||||||    
T  2566194 ttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatcaatgttgtgtttacgaggattgattttgccatccaaaaaggtct 2566293  T
Q  115 agcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||| ||| ||||||| || |||||||| | ||||| ||||||||||    
T  2566294 agcggcgcaacttgttgcccacttgccttattttcaattgtaaataat 2566341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 15292135 - 15292281
Alignment:
Q  26 gttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagc 125  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  | |||| ||||     
T  15292135 gttcaaaaggtcatgcatagcaatgtcacatctcctaggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaaagcttggcggcgcagt 15292234  T
Q  126 ttgttgtccgcttgccttctattcaagtgtaaataattgtgtatata 172  Q
    |||||| || |||||||||||||||||| |||||||| || ||||||    
T  15292235 ttgttgcccacttgccttctattcaagtataaataatggtttatata 15292281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42921719 - 42921559
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||| ||| ||||||| |  ||||||| |||||||    
T  42921719 agaggttgttggccttctacatagagttcagaaggtcatgcataacaatgtcatgtctcctaagtccat-aatattgtgtttacaaggattggttttgcc 42921621  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| |||||| |||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  42921620 atccaaaaagatctagcggcgcagcttgtttcccacttgccttctattcaagtgtaaataat 42921559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 430617 - 430475
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    |||||||||||||||||  | |||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||    
T  430617 gttgaccttctacatagattccaaagggttatgcatagtaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattatgccatccaaa 430518  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||||||| ||||||||||||| ||| |||||||| |||||||    
T  430517 aaggtctatcggtgcagcttgtngtctgcttgcctcctattca 430475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13166995 - 13167156
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||| |||||||||||||||||| || |||| ||| |||||||||||||  ||||||||||||||||||||||||| ||| | || |||||||| ||      
T  13166995 agagactgttgaccttctacatagagtccaaagggttatgcatagcaatggtatgtctcctaggtccatgaatgttgggtttacgatgattgattctgtt 13167094  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| |||||| |||||||| ||||||||||| || ||||||| ||||||| |||||| ||||    
T  13167095 atccaaaaagatctagcggcgcagcttgttgcccacttgcctcctattcatgtgtaattaat 13167156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37873723 - 37873852
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| | |||||||||| || ||||||| |||||||||||||| | |||||||||||||||     
T  37873723 agaggttgttgaccttctacatagagttcaaagggtcatgcagaacaatgtcatgacttctaggtctatgaatgttgtgtttaagaggattgattttgct 37873822  T
Q  101 atctaaaaaggtctagcggtgcagcttgtt 130  Q
    ||| ||||||| ||||||||||| ||||||    
T  37873823 atcaaaaaaggcctagcggtgcaacttgtt 37873852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 27336708 - 27336556
Alignment:
Q  8 gttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaa 107  Q
    ||||||||||||||||| |   ||| ||| ||| |||||||||| |||||||||| ||||||||||||||| || |  |||||||||||||||||| |||    
T  27336708 gttgaccttctacatagaga--aaatggttatgtatagcaatgttatgtctcctaagtccatgaatgttgtttttacaaggattgattttgccatcaaaa 27336611  T
Q  108 aaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||||||||||||| || ||||||||||| || ||||||| |||||| ||||    
T  27336610 aaggtctagcggtgcagtttattgtccgcttgtctcctattcatgtgtaagtaat 27336556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 35310464 - 35310309
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||| ||||||||||||| || |||| |||  |||||| |||||| ||||||||||||||||||||||||||||| | ||| |||| |||||||||| ||    
T  35310464 tgttaaccttctacatagagtccaaagggttttgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatccaa 35310365  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    | |||| || ||  ||||||||||| |||||||||| ||||||| |||||| ||||    
T  35310364 agaggtttaacgacgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 35310309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 23023591 - 23023461
Alignment:
Q  27 ttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagct 126  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | || ||||||||||| |||| ||||||| |||| || ||| ||    
T  23023591 ttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcgatgaatgttgtgtttacgaagattgattttgtcatccaaaaaggcctaggggcgcatct 23023492  T
Q  127 tgttgtccgcttgccttctattcaagtgtaa 157  Q
    | ||||||| ||||||| |||| | ||||||    
T  23023491 tattgtccgtttgccttttatttatgtgtaa 23023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 14423698 - 14423552
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| |||   ||||| || |||| |||||||||||||| ||||||||| |||  ||||||||  ||||||| |||||||||| ||    
T  14423698 tgttgaccttctacatagagtt---aaggtaattcataacaatgtcatgtctcttaggtccataaat--tgtgttcacaaggattggttttgccatccaa 14423604  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||| |||||||||||||    ||||||||||||||| ||||||||||||||||||    
T  14423603 aaagatctagcggtgcag----ttgtccgcttgccttttattcaagtgtaaataat 14423552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 26212679 - 26212829
Alignment:
Q  12 accttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaagg 111  Q
    ||||||||||||| |||||||| |||||| || ||||| | |||||||||| ||||||||||||||| ||||||||||||| ||||||| ||  |||||     
T  26212679 accttctacatagagttcaaaatgtcatgtatggcaatattatgtctcctaagtccatgaatgttgttttcatgaggattggttttgccttccgaaaaga 26212778  T
Q  112 tctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||| |  |||   | ||| |||||||| |||||||||||||||||||||    
T  26212779 tctagtgacgcaatatattgcccgcttgctttctattcaagtgtaaataat 26212829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 22188746 - 22188855
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| | ||||||||||||||| | ||| |||| ||||| |||| ||    
T  22188746 tgttgaccttctacatagagttcaaaaggtcatgcataacaatatcatgtctcctagattcatgaatgttgtgtttacgagaattggttttgtcatccaa 22188845  T
Q  107 aaaggtctag 116  Q
    ||| ||||||    
T  22188846 aaaagtctag 22188855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33692140 - 33692298
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    ||||| |||||||||||||||||| || |||| ||| ||||||| |||||| ||||||| ||||| |||||||||| |||| | ||   ||| |||| ||    
T  33692140 agagactgttgaccttctacatagtgtccaaagggt-atgcataacaatgttatgtctcataggttcatgaatgttctgtttacgat--ttggtttttcc 33692236  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||| |||||| |||||||| ||||||||||| | |||||||| ||||||| |||||| ||||    
T  33692237 atccaaaaagatctagcggcgcagcttgttgcctgcttgcctcctattcatgtgtaagtaat 33692298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 25663122 - 25663247
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||| ||||||||||| || |||| ||| ||||||| |||||| ||||| ||||||||||||||||||| ||| | ||||||||  |||| |||| |    
T  25663122 ttgttgatcttctacatagagtccaaagggttatgcatatcaatgttatgtcccctaggtccatgaatgttgagtttacgaggattggctttgtcatcca 25663221  T
Q  106 aaaaggtctagcggtgcagcttgttg 131  Q
    |||||||||| ||  |||||||||||    
T  25663222 aaaaggtctaacgacgcagcttgttg 25663247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 15810052 - 15809972
Alignment:
Q  21 atagggttcaaaa-ggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  15810052 atagagttcaaaatggtcatgtatagcaatgtcatgtctcctaggcccatgaatgtcgtgttcacgaggattgattttgcc 15809972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 23423961 - 23424105
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    |||||||||||||||||||  |||||| | |||| ||| |||||||||||| |||||  || || ||| ||||||| |||| ||||||||||| |||| |    
T  23423961 ttgttgaccttctacatagatttcaaaggatcattcattgcaatgtcatgtatcctacttctatcaatattgtgtttatgaagattgattttgtcatcca 23424060  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||| ||||| |||||||||||| |   || ||||||||||||||    
T  23424061 aaaatgtctatcggtgcagcttgattctcgtttgccttctattca 23424105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27294460 - 27294330
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||||||  ||||||| ||||| | ||| |||  | |||||| |||||||||||||||   |||| ||||| | | ||||||||    
T  27294460 agaggttgttgaccttctacatatagttcaaatggtcacgtataacaacattatgtcttctaggtccatgaatgagttgtttatgagaactaattttgcc 27294361  T
Q  101 atctaaaaaggtctagcggtgcagcttgttg 131  Q
    |||||||||||| |||||||||| |||||||    
T  27294360 atctaaaaaggtttagcggtgcaacttgttg 27294330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 38875651 - 38875504
Alignment:
Q  10 tgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaa 109  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||| | || |||||   |||| ||| |||||    
T  38875651 tgaccttctacgtagagttcaaaaggtcatgcataacaatgtcttgtctcctaggtcaatg-atgttgtgtttacgatgattg--gttgcgatccaaaaa 38875555  T
Q  110 ggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||  | |||| |||| || ||||| | || |||||||||||||||||||||||    
T  38875554 gg--ttgcggcgcagtttattgtctgtttaccttctattcaagtgtaaataat 38875504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 15506729 - 15506843
Alignment:
Q  30 aaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgt 129  Q
    ||||||| ||| ||||||||||||||||||||||  | | |||||||||||| | ||||||||||||| ||||| ||||||| ||| ||| ||| |||||    
T  15506729 aaaaggttatgtatagcaatgtcatgtctcctagacctacgaatgttgtgtttacgaggattgattttaccatcaaaaaaggcctaacggcgcaacttgt 15506828  T
Q  130 tgtccgcttgccttc 144  Q
    ||  || ||||||||    
T  15506829 tgctcgtttgccttc 15506843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 34335353 - 34335210
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaa 106  Q
    |||||||||||||||||| ||||||  | |||||| || |||| |||||||||||||  |||| ||| ||||||| | || ||||||||||| || ||||    
T  34335353 tgttgaccttctacatagagttcaacggatcatgcgtaacaatctcatgtctcctagacccataaatattgtgtttacgatgattgattttgtcacctaa 34335254  T
Q  107 aaaggtctagcggtgcagcttgttgtccgcttgccttctattca 150  Q
    |||   |||||||  || ||||||  |||||||| |||||||||    
T  34335253 aaacacctagcggcacaacttgttacccgcttgcattctattca 34335210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 12033383 - 12033291
Alignment:
Q  71 aatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    ||||||||||| | || ||||| |||||||||| |||| | |||| ||||||||||| || ||| |||| |||||||| ||||||||||||||    
T  12033383 aatgttgtgtttacgatgattggttttgccatccaaaatgatctaacggtgcagcttattatccacttgtcttctatttaagtgtaaataatt 12033291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 16017170 - 16017087
Alignment:
Q  26 gttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaa 109  Q
    ||||||||||||||||||||||||||  ||||||||||||  |||  ||| || || | || ||||||||||||||||||||||    
T  16017170 gttcaaaaggtcatgcatagcaatgttgtgtctcctaggtttatgggtgtggtttttaagatgattgattttgccatctaaaaa 16017087  T

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Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 43350037 - 43349926
Alignment:
Q  46 caatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttct 145  Q
    |||||||||| ||| || ||| |||||||||||||| |  | |||||||||||| ||||||||| | ||| || ||||| |||||||||||| || || |    
T  43350037 caatgtcatgactcttaagtcaatgaatgttgtgtttacaatgattgattttgctatctaaaaaagcctaacgatgcagattgttgtccgctcgcattat 43349938  T
Q  146 attcaagtgtaa 157  Q
    ||||| ||||||    
T  43349937 attcatgtgtaa 43349926  T

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Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8100574 - 8100431
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||| ||||||||||||||| ||| ||| |||   ||||||||| ||||||||||||| |||||| | | |||||||| ||   || |||||||||||||    
T  8100574 agaggttgttgaccttctacgtagagtttaaagattcatgcatatcaatgtcatgtcttctaggt-cgtaaatgttgt-tttgcgatgattgattttgcc 8100477  T
Q  101 atctaaaaaggtctagcggtgcagcttgttgtccgcttgccttcta 146  Q
    ||| ||||| | |||| || ||||||||||||  |||||| |||||    
T  8100476 atccaaaaaagcctagtggcgcagcttgttgtgagcttgctttcta 8100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 24113571 - 24113520
Alignment:
Q  27 ttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 78  Q
    |||||| | ||||||||| ||||||||||||| |||||||||||||||||||    
T  24113571 ttcaaatgatcatgcataacaatgtcatgtcttctaggtccatgaatgttgt 24113520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 2917539 - 2917601
Alignment:
Q  94 ttttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgta 156  Q
    |||||||||| ||||||||||||||| |||| |||||| | |||||||| ||||||| |||||    
T  2917539 ttttgccatccaaaaaggtctagcggcgcagtttgttgcctgcttgcctcctattcatgtgta 2917601  T

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Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 11005815 - 11005757
Alignment:
Q  86 aggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttc 144  Q
    ||||||| |||||||||| |||||||  |||||| ||||||||||| ||||||||||||    
T  11005815 aggattggttttgccatccaaaaaggcttagcggcgcagcttgttgcccgcttgccttc 11005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 23092757 - 23092694
Alignment:
Q  85 gaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctatt 148  Q
    |||||||||||||| |||| || ||||||||||   |||| |||||||| ||||||||||||||    
T  23092757 gaggattgattttgtcatccaacaaggtctagcaacgcagtttgttgtctgcttgccttctatt 23092694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 27913540 - 27913490
Alignment:
Q  113 ctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    ||||||| ||||||||||| ||||||||||||||| |  ||||||||||||    
T  27913540 ctagcggcgcagcttgttgcccgcttgccttctatccttgtgtaaataatt 27913490  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 12739154 - 12739059
Alignment:
Q  67 catgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    ||||||||||||||| || | ||||| ||||||||| ||||||  |||||||| | |   |||||| || |||||||||||||| |||||| |||||    
T  12739154 catgaatgttgtgtttataaagattggttttgccat-taaaaaaatctagcggcgtaatatgttgttcgtttgccttctattcatgtgtaattaatt 12739059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 12801977 - 12801882
Alignment:
Q  67 catgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataatt 163  Q
    ||||||||||||||| || | ||||| ||||||||| ||||||  |||||||| | |   |||||| || |||||||||||||| |||||| |||||    
T  12801977 catgaatgttgtgtttataaagattggttttgccat-taaaaaaatctagcggcgtaatatgttgttcgtttgccttctattcatgtgtaattaatt 12801882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 22819748 - 22819820
Alignment:
Q  26 gttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttg 98  Q
    |||||||  ||| ||||||||||||| ||||||  ||  || |||||||||||||| |||| |||||||||||    
T  22819748 gttcaaagagtcgtgcatagcaatgttatgtctgttaaatctatgaatgttgtgtttatgaagattgattttg 22819820  T

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Target: scaffold0309 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 5276 - 5174
Alignment:
Q  71 aatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataattgtgtata 170  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| || ||||    
T  5276 aatgttgtgttcacgaggattgactttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcattctattcaagtgtaaataatggtttata 5177  T
Q  171 taa 173  Q
    |||    
T  5176 taa 5174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 274 - 430
Alignment:
Q  6 ttgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatcta 105  Q
    ||||||||||||| ||||  |||||||| ||||| ||||||||||||||||||||||| || ||||| |||||||| | |||||||  |||||||||| |    
T  274 ttgttgaccttctgcataaagttcaaaaagtcatacatagcaatgtcatgtctcctagatcgatgaacgttgtgtttacgaggattagttttgccatcca 373  T
Q  106 aaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    ||||||  | | || ||| ||||||| | |||| |||||||||||||||||||||||    
T  374 aaaaggctttgtggcgcatcttgttgccggctttccttctattcaagtgtaaataat 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 6350 - 6279
Alignment:
Q  7 tgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 78  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6350 tgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7624 - 7496
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgcc 100  Q
    |||||||||||||||| | ||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| | ||| |||| ||||| |    
T  7624 agagattgttgaccttttgcatagcgttcaaaaggtcatgcatat-aatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtc 7526  T
Q  101 atctaaaaaggtctagcggtgcagcttgtt 130  Q
    ||| |||||| |||| |||  |||||||||    
T  7525 atccaaaaagatctaacggcacagcttgtt 7496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 6837 - 6750
Alignment:
Q  74 gttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataa 161  Q
    |||||||| | ||| |||| |||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  6837 gttgtgtttacgagaattggttttgccatccaaaaaggtctagcgccgcagcttgttgcccgcttgccttctattcaagtgtaaataa 6750  T

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Target: scaffold0031 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 49419 - 49292
Alignment:
Q  19 acatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcg 118  Q
    |||||| ||||||| | ||||||||| |||||||||||||| || |||||||||||| || || | ||| ||||||||| |||||||||| |||||||||    
T  49419 acatagagttcaaaggatcatgcataacaatgtcatgtctcttatgtccatgaatgtagtatttacgagaattgatttttccatctaaaacggtctagcg 49320  T
Q  119 gtgcagcttgttgtccgcttgccttcta 146  Q
    | ||| |||||||   ||||||||||||    
T  49319 gcgcaacttgttgctagcttgccttcta 49292  T

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Target: scaffold0244 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 16807 - 16900
Alignment:
Q  69 tgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgcttgccttctattcaagtgtaaataat 162  Q
    |||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||| ||||| ||  |||||||| |||||| ||||||||||    
T  16807 tgaatgttgtattcacgagaattgattttgccatccaaaaaggtctagcggtgcagcatgttgcccttttgccttccattcaaatgtaaataat 16900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 16120 - 15997
Alignment:
Q  9 ttgaccttctacatagggttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaa 108  Q
    ||||| |||||||||| ||||||| |||||||||||| ||| |||||| ||||  ||| |||||| || |||| ||||| |||||||||   ||| ||||    
T  16120 ttgactttctacatagagttcaaagggtcatgcatagtaatatcatgtttcctgtgtctatgaattttttgtttatgagaattgattttataatccaaaa 16021  T
Q  109 aggtctagcggtgcagcttgttgt 132  Q
    |||||||  | |||||||||||||    
T  16020 aggtctaaagatgcagcttgttgt 15997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 47641 - 47767
Alignment:
Q  37 catgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgccatctaaaaaggtctagcggtgcagcttgttgtccgc 136  Q
    |||||||| |||||||| || || |||| ||||||||||| |||| |  | |||||||||| ||||| ||||| || ||||||  || |||||||||||     
T  47641 catgcataacaatgtcacgtttcataggcccatgaatgttatgtttacaaagattgattttaccatcgaaaaatgtttagcggcacaacttgttgtccgt 47740  T
Q  137 ttgccttctattcaagtgtaaataatt 163  Q
    ||| |||||||||| |||||| |||||    
T  47741 ttgtcttctattcacgtgtaagtaatt 47767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18449 - 18499
Alignment:
Q  1 agagattgttgaccttctacatagggttcaaaaggtcatgcatagcaatgt 51  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||    
T  18449 agagattgttaaccttctacatagagtttaaagggtcatgcagagcaatgt 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 17390 - 17460
Alignment:
Q  27 ttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttgc 99  Q
    |||||| |||||||||||  |||||  |||||| ||||||||||||||||||||| | || ||||| ||||||    
T  17390 ttcaaatggtcatgcataataatgt--tgtctcttaggtccatgaatgttgtgtttaagatgattgcttttgc 17460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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